Top 20 Categories

Top 20 InterPro

312	NULL	NULL
113	IPR003439	ABC transporter related
66	IPR000515	Binding-protein-dependent transport systems inner membrane component
39	IPR007114	Major facilitator superfamily
34	IPR001789	Response regulator receiver
34	IPR000847	Bacterial regulatory protein, LysR
25	IPR005467	Histidine kinase
23	IPR004358	Histidine kinase related protein, C-terminal
23	IPR003660	Histidine kinase, HAMP region
19	IPR001867	Transcriptional regulatory protein, C-terminal
19	IPR000843	Bacterial regulatory protein, LacI
18	IPR002198	Short-chain dehydrogenase/reductase SDR
18	IPR001450	4Fe-4S ferredoxin, iron-sulphur binding
18	IPR000005	Helix-turn-helix, AraC type
17	IPR014021	Helicase, superfamily 1 and 2, ATP-binding
17	IPR000182	GCN5-related N-acetyltransferase
16	IPR002347	Glucose/ribitol dehydrogenase
15	IPR013027	FAD-dependent pyridine nucleotide-disulphide oxidoreductase
15	IPR011527	ABC transporter, transmembrane region, type 1
14	IPR003593	AAA+ ATPase, core

Top 20 HMMPfam

9	PF00005	ABC_tran
6	PF02653	BPD_transp_2
6	PF00583	Acetyltransf_1
6	PF00072	Response_reg
5	PF00165	HTH_AraC
4	PF03466	LysR_substrate
4	PF02518	HATPase_c
4	PF00512	HisKA
4	PF00126	HTH_1
3	PF07728	AAA_5
3	PF07715	Plug
3	PF03144	GTP_EFTU_D2
3	PF01547	SBP_bac_1
3	PF01370	Epimerase
3	PF00702	Hydrolase
3	PF00672	HAMP
3	PF00593	TonB_dep_Rec
3	PF00440	TetR_N
3	PF00009	GTP_EFTU
2	PF09013	YopH_N

Top 20 HMMTigr

3	TIGR00231	small_GTP
2	TIGR01786	TonB-hemlactrns
2	TIGR01785	TonB-hemin
1	TIGR03421	FeS_CyaY
1	TIGR03378	glycerol3P_GlpB
1	TIGR03377	glycerol3P_GlpA
1	TIGR03307	PhnP
1	TIGR03263	guanyl_kin
1	TIGR03034	TIGR03034
1	TIGR02998	RraA_entero
1	TIGR02842	CyoC
1	TIGR02798	ligK_PcmE
1	TIGR02711	symport_actP
1	TIGR02622	CDP_4_6_dhtase
1	TIGR02551	SpaO_YscQ
1	TIGR02544	III_secr_YscJ
1	TIGR02498	type_III_ssaH
1	TIGR02497	yscI_hrpB_dom
1	TIGR02491	NrdG
1	TIGR02487	NrdD

Top 20 ProfileScan

110	PS50893	ABC_TRANSPORTER_2
102	PS00013	PROKAR_LIPOPROTEIN
66	PS50928	ABC_TM1
39	PS50850	MFS
34	PS50931	HTH_LYSR
34	PS50110	RESPONSE_REGULATORY
25	PS50109	HIS_KIN
23	PS50885	HAMP
18	PS50932	HTH_LACI_2
17	PS51192	HELICASE_ATP_BIND_1
17	PS51186	GNAT
16	PS01124	HTH_ARAC_FAMILY_2
15	PS50929	ABC_TM1F
14	PS51194	HELICASE_CTER
13	PS51208	AUTOTRANSPORTER
13	PS50043	HTH_LUXR_2
12	PS50994	INTEGRASE
12	PS50949	HTH_GNTR
12	PS50943	HTH_CROC1
11	PS51123	OMPA_2

Top 20 FPrintScan

23	PR00344	BCTRLSENSOR
20	PR00039	HTHLYSR
16	PR00081	GDHRDH
16	PR00032	HTHARAC
15	PR00368	FADPNR
14	PR00411	PNDRDTASEI
14	PR00080	SDRFAMILY
13	PR00353	4FE4SFRDOXIN
13	PR00300	CLPPROTEASEA
12	PR01590	HTHFIS
12	PR00038	HTHLUXR
11	PR00035	HTHGNTR
10	PR00969	CHAPERONPILI
10	PR00502	NUDIXFAMILY
9	PR00469	PNDRDTASEII
9	PR00050	COLDSHOCK
8	PR00413	HADHALOGNASE
8	PR00315	ELONGATNFCT
8	PR00154	AMPBINDING
8	PR00069	ALDKETRDTASE

Top 20 BlastProDom

109	PD000006	sp_Q8D1M3_YERPE_Q8D1M3;
34	PD000039	sp_Q8ZJR7_YERPE_Q8ZJR7;
19	PD000329	sp_Q9CJV4_PASMU_Q9CJV4;
13	PD000307	sp_Q8ZJ69_YERPE_Q8ZJ69;
11	PD000930	sp_Q8ZIP6_YERPE_Q8ZIP6;
11	PD000139	sp_Q8ZA94_YERPE_Q8ZA94;
10	PD001447	sp_Q8ZAC9_YERPE_Q8ZAC9;
9	PD000621	sp_Q8ZDH3_YERPE_Q8ZDH3;
8	PD000288	sp_Q89IT7_BRAJA_Q89IT7;
5	PD688335	sp_Q9RI05_YERPE_Q9RI05;
5	PD008688	sp_Q89KV3_BRAJA_Q89KV3;
5	PD003831	sp_Q899Z5_CLOTE_Q899Z5;
5	PD001689	sp_Q8ZIT3_YERPE_Q8ZIT3;
5	PD001243	sp_Q8ZJQ5_YERPE_Q8ZJQ5;
5	PD000779	sp_Q8FGF8_ECOL6_Q8FGF8;
4	PD002376	sp_Q8XKP4_CLOPE_Q8XKP4;
4	PD002238	sp_Q6KHN8_MYCMO_Q6KHN8;
4	PD001895	sp_Q6D1Y4_BBBBB_Q6D1Y4;
4	PD001819	sp_RLUA_YERPE_Q8ZIK1;
4	PD001777	sp_Q8ZJ53_YERPE_Q8ZJ53;

Top 20 COGs

224	COG4988	ABC-type transport system involved in cytochrome bd biosynthesis ATPase and permease components
222	COG4987	ABC-type transport system involved in cytochrome bd biosynthesis fused ATPase and permease components
222	COG4555	ABC-type Na+ transport system ATPase component
222	COG1120	ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components
220	COG4615	ABC-type siderophore export system fused ATPase and permease components
220	COG1124	ABC-type dipeptide/oligopeptide/nickel transport system ATPase component
220	COG0444	ABC-type dipeptide/oligopeptide/nickel transport system ATPase component
218	COG1134	ABC-type polysaccharide/polyol phosphate transport system ATPase component
117	COG1245	Predicted ATPase RNase L inhibitor (RLI) homolog
112	COG1131	ABC-type multidrug transport system ATPase component
111	COG4181	Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis ATPase component
111	COG4172	ABC-type uncharacterized transport system duplicated ATPase component
111	COG4148	ABC-type molybdate transport system ATPase component
111	COG4133	ABC-type transport system involved in cytochrome c biogenesis ATPase component
111	COG3839	ABC-type sugar transport systems ATPase components
111	COG2274	ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain
111	COG1136	ABC-type antimicrobial peptide transport system ATPase component
111	COG1123	ATPase components of various ABC-type transport systems contain duplicated ATPase
111	COG1121	ABC-type Mn/Zn transport systems ATPase component
111	COG0488	ATPase components of ABC transporter with duplicated ATPase domains

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