Sponsored by:
CREDITS:
|
Yersinia pseudotuberculosis complete genome sequence and annotation.
- View in WebArtemis
-
Multiple FASTA file of annotated peptides.
-
Most Frequent InterPro and Pfam domains
-
Metabolic Pathway
-
Taxonomic Distribution
-
Genes Organized by Replicon
-
Genes grouped by COGs category
- Statistics
| Category | Chromosome | pYV | pYptb32953 |
|---|
| Bases | 4,744,671 | 68,526 | 27,702 |
| CDS features | 3901 | 95 | 42 |
| Bases in CDS features | 3,917,124 | 54,189 | 23,367 |
| Density (genes per kb) | 0.82 | 1.39 | 1.516 |
| Average length | 1004 | 570 | 556 |
| Coding percentage | 82.5 | 79.0 | 84.3 |
| Percent GC | 48.9 | 46.1 | 45.6 |
| tRNA | 85 | 0 | 0 |
| rRNA operons | 7 | 0 | 0 |
-
Circular Map of Chromosome
-
Blast against the genome
-
Tab-Delimited Files
- Insights into the evolution of Yersinia pestis through whole genome comparison with Yersinia pseudotuberculosis.
P. S. G. Chain, E. Carniel, F. W. Larimer, J. Lamerdin, P. O. Stoutland, W. M Regala, A. M. Georgescu, L. M. Vergez, M. L. Land, V. L. Motin, R. R. Brubaker, J. Fowler, J. Hinnebusch, M. Marceau, C. Medigue, M. Simonet, V. Chenal-Francisque, B. Souza, D. Dacheux, J. M. Elliott, A. Derbise, L. J. Hauser, and E. Garcia. PNAS published September 9, 2004 10.1073/pnas.0404012101
- Related sequenced Yersinia:
|
![[space]](http://homer.ornl.gov/compbio/public/images/bluespacer.gif){kind=small}
![[space]](http://compbio.ornl.gov/public/images/bluespacer.gif){kind=small}