Cell Motility and Secretion

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Chemotaxis protein CheC inhibitor of MCP methylation	N	Contig13	Tmel0484	COG1776	42	2e-05
Chemotaxis protein CheC inhibitor of MCP methylation	N	Contig13	Tmel1299	COG1776	118	5e-28
Chemotaxis protein CheC inhibitor of MCP methylation	N	Contig13	Tmel1433	COG1776	131	2e-32
Chemotaxis protein histidine kinase and related kinase	N	Contig13	Tmel0275	COG0643	42	2e-05
Chemotaxis protein histidine kinase and related kinase	N	Contig13	Tmel0498	COG0643	61	1e-10
Chemotaxis protein histidine kinase and related kinase	N	Contig13	Tmel0915	COG0643	34	0.008
Chemotaxis protein histidine kinase and related kinase	N	Contig13	Tmel0933	COG0643	631	0.0
Chemotaxis protein histidine kinase and related kinase	N	Contig13	Tmel1148	COG0643	167	2e-42
Chemotaxis protein histidine kinase and related kinase	N	Contig13	Tmel1496	COG0643	43	4e-05
Chemotaxis protein histidine kinase and related kinase	N	Contig13	Tmel1839	COG0643	58	2e-09
Chemotaxis protein; stimulates methylation of MCP protein	N	Contig13	Tmel1432	COG1871	165	1e-42
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig13	Tmel0114	COG2201	63	2e-11
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig13	Tmel0261	COG2201	60	4e-10
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig13	Tmel0460	COG2201	63	7e-12
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig13	Tmel0843	COG2201	65	1e-12
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig13	Tmel0931	COG2201	100	3e-23
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig13	Tmel1145	COG2201	68	1e-12
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig13	Tmel1146	COG2201	57	6e-10
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig13	Tmel1147	COG2201	71	4e-14
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig13	Tmel1263	COG2201	53	2e-08
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig13	Tmel1516	COG2201	65	6e-12
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig13	Tmel1636	COG2201	63	3e-11
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig13	Tmel1770	COG2201	388	1.0e-109
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig13	Tmel1824	COG2201	60	1e-10
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig13	Tmel1838	COG2201	62	3e-11
Chemotaxis signal transduction protein	N	Contig13	Tmel0275	COG0835	128	3e-31
Chemotaxis signal transduction protein	N	Contig13	Tmel0932	COG0835	90	5e-20
Chemotaxis signal transduction protein	N	Contig13	Tmel0933	COG0835	41	2e-04
Flagellar basal body rod protein	N	Contig13	Tmel0328	COG4786	43	8e-05
Flagellar basal body rod protein	N	Contig13	Tmel0465	COG4787	93	1e-20
Flagellar basal body rod protein	N	Contig13	Tmel0465	COG4786	176	9e-46
Flagellar basal body rod protein	N	Contig13	Tmel0466	COG4787	106	1e-24
Flagellar basal body rod protein	N	Contig13	Tmel0466	COG4786	296	9e-82
Flagellar basal body rod protein	N	Contig13	Tmel1124	COG4786	39	1e-04
Flagellar basal body rod protein	N	Contig13	Tmel1125	COG4786	50	6e-08
Flagellar basal body rod protein	N	Contig13	Tmel1293	COG4787	64	4e-11
Flagellar basal body rod protein	N	Contig13	Tmel1293	COG4786	114	2e-26
Flagellar hook-length control protein	N	Contig13	Tmel1291	COG3144	48	3e-06

FLAGELLUM STRUCTURE AND BIOGENESIS

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Flagellar basal body-associated protein	N	Contig13	Tmel1297	COG1580	86	2e-18
Flagellar basal body L-ring protein	N	Contig13	Tmel0669	COG2063	90	1e-19
Flagellar basal body P-ring biosynthesis protein	N	Contig13	Tmel0670	COG1261	79	3e-16
Flagellar basal-body P-ring protein	N	Contig13	Tmel0668	COG1706	307	7e-85
Flagellar basal body protein	N	Contig13	Tmel0465	COG1815	35	0.007
Flagellar basal body protein	N	Contig13	Tmel0466	COG1815	40	2e-04
Flagellar basal body protein	N	Contig13	Tmel1124	COG1815	97	3e-22
Flagellar basal body protein	N	Contig13	Tmel1125	COG1815	41	3e-05
Flagellar basal body rod protein	N	Contig13	Tmel0328	COG1558	38	0.003
Flagellar basal body rod protein	N	Contig13	Tmel0465	COG1558	50	2e-07
Flagellar basal body rod protein	N	Contig13	Tmel0466	COG1558	57	1e-09
Flagellar basal body rod protein	N	Contig13	Tmel1124	COG1558	34	0.003
Flagellar basal body rod protein	N	Contig13	Tmel1125	COG1558	182	1e-47
Flagellar basal body rod protein	N	Contig13	Tmel1293	COG1558	38	0.002
Flagellar biosynthesis chaperone	N	Contig13	Tmel0887	COG2882	40	6e-05
Flagellar biosynthesis chaperone	N	Contig13	Tmel1703	COG2882	35	0.009
Flagellar biosynthesis pathway component FlhA	N	Contig13	Tmel1438	COG1298	771	0.0
Flagellar biosynthesis pathway component FlhB	N	Contig13	Tmel0849	COG1377	387	1.0e-109
Flagellar biosynthesis pathway component FlhB	N	Contig13	Tmel1547	COG1377	69	7e-14
Flagellar biosynthesis pathway component FliP	N	Contig13	Tmel0929	COG1338	247	7e-67
Flagellar biosynthesis pathway component FliQ	N	Contig13	Tmel0928	COG1987	69	7e-14
Flagellar biosynthesis pathway component FliR	N	Contig13	Tmel0850	COG1684	127	8e-31
Flagellar biosynthesis/type III secretory pathway ATPase	N	Contig13	Tmel0134	COG1157	37	0.005
Flagellar biosynthesis/type III secretory pathway ATPase	N	Contig13	Tmel0290	COG1157	250	1e-67
Flagellar biosynthesis/type III secretory pathway ATPase	N	Contig13	Tmel0292	COG1157	206	2e-54
Flagellar biosynthesis/type III secretory pathway ATPase	N	Contig13	Tmel1269	COG1157	617	1.0e-178
Flagellar biosynthesis/type III secretory pathway ATPase	N	Contig13	Tmel1393	COG1157	111	1e-25
Flagellar biosynthesis/type III secretory pathway lipoprotein	N	Contig13	Tmel0476	COG1766	282	5e-77
Flagellar biosynthesis/type III secretory pathway protein	N	Contig13	Tmel1270	COG1317	42	3e-05
Flagellar capping protein	N	Contig13	Tmel1500	COG1345	122	5e-29
Flagellar GTP-binding protein	N	Contig13	Tmel0740	COG1419	35	0.004
Flagellar GTP-binding protein	N	Contig13	Tmel1396	COG1419	35	0.009
Flagellar GTP-binding protein	N	Contig13	Tmel1437	COG1419	251	9e-68
Flagellar GTP-binding protein	N	Contig13	Tmel1555	COG1419	97	2e-21
Flagellar GTP-binding protein	N	Contig13	Tmel1806	COG1419	100	2e-22
Flagellar hook-associated protein	N	Contig13	Tmel0328	COG1256	228	1e-60
Flagellar hook-associated protein	N	Contig13	Tmel0466	COG1256	38	9e-04
Flagellar hook-associated protein	N	Contig13	Tmel1125	COG1256	34	0.003
Flagellar hook-associated protein	N	Contig13	Tmel1293	COG1256	43	9e-05
Flagellar hook-basal body protein	N	Contig13	Tmel1126	COG1677	78	9e-17
Flagellar hook capping protein	N	Contig13	Tmel1292	COG1843	142	2e-35
Flagellar hook protein FlgE	N	Contig13	Tmel0328	COG1749	40	5e-04
Flagellar hook protein FlgE	N	Contig13	Tmel0465	COG1749	104	5e-24
Flagellar hook protein FlgE	N	Contig13	Tmel0466	COG1749	108	3e-25
Flagellar hook protein FlgE	N	Contig13	Tmel1125	COG1749	42	1e-05
Flagellar hook protein FlgE	N	Contig13	Tmel1293	COG1749	161	2e-40
Flagellar motor component	N	Contig13	Tmel1295	COG1291	246	2e-66
Flagellar motor protein	N	Contig13	Tmel1296	COG1360	127	8e-31
Flagellar motor switch protein	N	Contig13	Tmel0477	COG1536	310	1e-85
Flagellar motor switch protein	N	Contig13	Tmel1298	COG1868	300	6e-83
Flagellar motor switch protein	N	Contig13	Tmel1299	COG1868	66	6e-12
Flagellar motor switch/type III secretory pathway protein	N	Contig13	Tmel1298	COG1886	42	8e-05
Flagellar motor switch/type III secretory pathway protein	N	Contig13	Tmel1299	COG1886	97	1e-21
Flagellin and related hook-associated protein	N	Contig13	Tmel0329	COG1344	111	7e-26
Flagellin and related hook-associated protein	N	Contig13	Tmel0514	COG1344	235	5e-63
Flagellin and related hook-associated protein	N	Contig13	Tmel0539	COG1344	226	2e-60
Flagellin and related hook-associated protein	N	Contig13	Tmel0622	COG1344	86	2e-18
Flagellin-specific chaperone FliS	N	Contig13	Tmel0557	COG1516	123	3e-30
Muramidase (flagellum-specific)	N	Contig13	Tmel1338	COG1705	43	2e-05
Predicted ATPase involved in biogenesis of flagella	N	Contig13	Tmel0023	COG2874	47	2e-06
Uncharacterized flagellar protein FlaG	N	Contig13	Tmel1499	COG1334	61	1e-11

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Flp pilus assembly protein TadC	N	Contig13	Tmel1749	COG2064	36	0.006
Methyl-accepting chemotaxis protein	N	Contig13	Tmel0046	COG0840	171	1e-43
Methyl-accepting chemotaxis protein	N	Contig13	Tmel0144	COG0840	139	4e-34
Methyl-accepting chemotaxis protein	N	Contig13	Tmel0322	COG0840	174	1e-44
Methyl-accepting chemotaxis protein	N	Contig13	Tmel0346	COG0840	151	1e-37
Methyl-accepting chemotaxis protein	N	Contig13	Tmel0416	COG0840	131	1e-31
Methyl-accepting chemotaxis protein	N	Contig13	Tmel0451	COG0840	74	7e-15
Methyl-accepting chemotaxis protein	N	Contig13	Tmel0749	COG0840	162	6e-41
Methyl-accepting chemotaxis protein	N	Contig13	Tmel0851	COG0840	115	1e-26
Methyl-accepting chemotaxis protein	N	Contig13	Tmel0889	COG0840	38	0.005
Methyl-accepting chemotaxis protein	N	Contig13	Tmel1120	COG0840	161	1e-40
Methyl-accepting chemotaxis protein	N	Contig13	Tmel1144	COG0840	68	2e-12
Methyl-accepting chemotaxis protein	N	Contig13	Tmel1579	COG0840	177	2e-45
Methyl-accepting chemotaxis protein	N	Contig13	Tmel1776	COG0840	161	1e-40
Methyl-accepting chemotaxis protein	N	Contig13	Tmel1816	COG0840	140	2e-34
Methyl-accepting chemotaxis protein	N	Contig13	Tmel1867	COG0840	76	2e-15
Methylase of chemotaxis methyl-accepting protein	N	Contig13	Tmel0987	COG1352	256	9e-70
Methylase of chemotaxis methyl-accepting protein	N	Contig13	Tmel1150	COG1352	111	9e-26
Negative regulator of flagellin synthesis (anti-sigma28 factor)	N	Contig13	Tmel0326	COG2747	34	0.003
Predicted inhibitor of MCP methylation homolog of CheC	N	Contig13	Tmel0484	COG1406	125	1e-30
Predicted inhibitor of MCP methylation homolog of CheC	N	Contig13	Tmel1299	COG1406	48	8e-07
Tfp pilus assembly protein ATPase PilM	N	Contig13	Tmel0464	COG4972	41	1e-04
Tfp pilus assembly protein ATPase PilM	N	Contig13	Tmel1919	COG4972	56	1e-08
Tfp pilus assembly protein ATPase PilU	N	Contig13	Tmel1276	COG5008	137	2e-33
Tfp pilus assembly protein ATPase PilU	N	Contig13	Tmel1396	COG5008	282	2e-77
Tfp pilus assembly protein FimT	N	Contig13	Tmel0536	COG4970	40	5e-05
Tfp pilus assembly protein FimT	N	Contig13	Tmel0687	COG4970	38	2e-04
Tfp pilus assembly protein FimT	N	Contig13	Tmel0897	COG4970	44	4e-06
Tfp pilus assembly protein major pilin PilA	N	Contig13	Tmel0536	COG4969	40	7e-05
Tfp pilus assembly protein major pilin PilA	N	Contig13	Tmel0687	COG4969	41	4e-05
Tfp pilus assembly protein PilE	N	Contig13	Tmel0536	COG4968	43	9e-06
Tfp pilus assembly protein PilE	N	Contig13	Tmel0687	COG4968	48	2e-07
Tfp pilus assembly protein PilE	N	Contig13	Tmel0897	COG4968	42	2e-05
Tfp pilus assembly protein PilF	N	Contig13	Tmel0311	COG3063	49	7e-07
Tfp pilus assembly protein PilF	N	Contig13	Tmel0580	COG3063	38	8e-04
Tfp pilus assembly protein PilF	N	Contig13	Tmel0745	COG3063	38	7e-04
Tfp pilus assembly protein PilF	N	Contig13	Tmel1263	COG3063	38	3e-04
Tfp pilus assembly protein PilF	N	Contig13	Tmel1796	COG3063	46	4e-06
Tfp pilus assembly protein pilus retraction ATPase PilT	N	Contig13	Tmel1276	COG2805	196	4e-51
Tfp pilus assembly protein pilus retraction ATPase PilT	N	Contig13	Tmel1396	COG2805	416	1.0e-117
Tfp pilus assembly protein pilus retraction ATPase PilT	N	Contig13	Tmel1437	COG2805	40	3e-04
Tfp pilus assembly protein pilus retraction ATPase PilT	N	Contig13	Tmel1815	COG2805	37	0.003
Tfp pilus assembly protein pilus retraction ATPase PilT	N	Contig13	Tmel1847	COG2805	36	0.009
Tfp pilus assembly protein pilus retraction ATPase PilT	N	Contig13	Tmel1900	COG2805	36	0.003
Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB	N	Contig13	Tmel1276	COG2804	525	1.0e-150
Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB	N	Contig13	Tmel1396	COG2804	177	9e-46
Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB	N	Contig13	Tmel1750	COG2804	35	0.004
Type II secretory pathway component PulD	N	Contig13	Tmel1255	COG1450	36	0.004
Type II secretory pathway component PulD	N	Contig13	Tmel1256	COG1450	74	2e-14
Type II secretory pathway component PulD	N	Contig13	Tmel1743	COG1450	137	7e-33
Type II secretory pathway component PulF	N	Contig13	Tmel1749	COG1459	292	4e-80
Type II secretory pathway prepilin signal peptidase PulO and related peptidase	N	Contig13	Tmel1795	COG1989	58	6e-10
Type II secretory pathway pseudopilin PulG	N	Contig13	Tmel0443	COG2165	33	0.007
Type II secretory pathway pseudopilin PulG	N	Contig13	Tmel0536	COG2165	45	1e-06
Type II secretory pathway pseudopilin PulG	N	Contig13	Tmel0687	COG2165	50	4e-08
Type II secretory pathway pseudopilin PulG	N	Contig13	Tmel0897	COG2165	37	0.001
Type II secretory pathway pseudopilin PulG	N	Contig13	Tmel0898	COG2165	37	0.002
Type II secretory pathway pseudopilin PulG	N	Contig13	Tmel1748	COG2165	33	0.007
Type IV secretory pathway VirB11 components and related ATPase involved in flagella biosynthesis	N	Contig13	Tmel0133	COG0630	44	4e-05
Type IV secretory pathway VirB11 components and related ATPase involved in flagella biosynthesis	N	Contig13	Tmel1276	COG0630	78	2e-15
Type IV secretory pathway VirB11 components and related ATPase involved in flagella biosynthesis	N	Contig13	Tmel1396	COG0630	68	9e-13
Type IV secretory pathway VirB11 components and related ATPase involved in flagella biosynthesis	N	Contig13	Tmel1750	COG0630	40	1e-04
Uncharacterized protein possibly involved in motility	N	Contig13	Tmel1294	COG1582	70	5e-14

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