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Translation, Ribosomal Structure and Biogenesis

COG Name Group Contig Gene COG ID Score Evalue
16S RNA G1207 methylase RsmC J Contig13 Tmel0187 COG2813 79 4e-16
16S RNA G1207 methylase RsmC J Contig13 Tmel0330 COG2813 45 4e-06
16S RNA G1207 methylase RsmC J Contig13 Tmel0405 COG2813 38 0.002
16S RNA G1207 methylase RsmC J Contig13 Tmel0565 COG2813 57 8e-10
16S RNA G1207 methylase RsmC J Contig13 Tmel0570 COG2813 41 2e-04
16S RNA G1207 methylase RsmC J Contig13 Tmel1421 COG2813 42 5e-05
16S RNA G1207 methylase RsmC J Contig13 Tmel1544 COG2813 52 1e-07
16S RNA G1207 methylase RsmC J Contig13 Tmel1751 COG2813 193 8e-51
16S RNA G1207 methylase RsmC J Contig13 Tmel1791 COG2813 35 0.007
16S RNA G1207 methylase RsmC J Contig13 Tmel1889 COG2813 40 3e-04
16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase J Contig13 Tmel0417 COG1187 165 2e-42
16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase J Contig13 Tmel0867 COG1187 203 1e-53
16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase J Contig13 Tmel0919 COG1187 63 3e-11
16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase J Contig13 Tmel0989 COG1187 50 2e-07
23S rRNA methylase J Contig13 Tmel0187 COG0293 36 0.003
23S rRNA methylase J Contig13 Tmel0935 COG0293 39 3e-04
2'-5' RNA ligase J Contig13 Tmel1157 COG1514 122 1e-29
2'-5' RNA ligase J Contig13 Tmel1707 COG1514 36 0.002
2'-5' RNA ligase J Contig13 Tmel1712 COG1514 36 0.003
2-methylthioadenine synthetase J Contig13 Tmel0071 COG0621 442 1.0e-125
2-methylthioadenine synthetase J Contig13 Tmel0179 COG0621 59 1e-09
2-methylthioadenine synthetase J Contig13 Tmel0674 COG0621 407 1.0e-115
2-methylthioadenine synthetase J Contig13 Tmel0774 COG0621 49 6e-07
2-methylthioadenine synthetase J Contig13 Tmel0944 COG0621 62 8e-11
2-methylthioadenine synthetase J Contig13 Tmel1010 COG0621 39 5e-04
2-methylthioadenine synthetase J Contig13 Tmel1049 COG0621 106 3e-24
2-methylthioadenine synthetase J Contig13 Tmel1155 COG0621 394 1.0e-111
2-methylthioadenine synthetase J Contig13 Tmel1179 COG0621 41 2e-04
2-methylthioadenine synthetase J Contig13 Tmel1368 COG0621 49 7e-07
2-methylthioadenine synthetase J Contig13 Tmel1506 COG0621 57 5e-09
2-methylthioadenine synthetase J Contig13 Tmel1565 COG0621 39 5e-04
2-methylthioadenine synthetase J Contig13 Tmel1597 COG0621 43 3e-05
Acetyltransferase including N-acetylase of ribosomal protein J Contig13 Tmel0259 COG1670 84 4e-18
Acetyltransferase including N-acetylase of ribosomal protein J Contig13 Tmel0538 COG1670 51 3e-08
Acetyltransferase including N-acetylase of ribosomal protein J Contig13 Tmel1781 COG1670 66 1e-12
Acetyltransferase including N-acetylase of ribosomal protein J Contig13 Tmel1831 COG1670 105 3e-24

AMINOACYL-TRNA SYNTHETASES AND ALTERNATIVE SYSTEMS FOR AMINO ACID ACTIVATION

COG Name Group Contig Gene COG ID Score Evalue
Alanyl-tRNA synthetase J Contig13 Tmel0633 COG0013 35 0.005
Alanyl-tRNA synthetase J Contig13 Tmel0917 COG0013 158 7e-40
Alanyl-tRNA synthetase J Contig13 Tmel1281 COG0013 1027 0.0
Alanyl-tRNA synthetase J Contig13 Tmel1327 COG0013 60 4e-10
Arginyl-tRNA synthetase J Contig13 Tmel0064 COG0018 40 3e-04
Arginyl-tRNA synthetase J Contig13 Tmel0065 COG0018 38 0.001
Arginyl-tRNA synthetase J Contig13 Tmel0256 COG0018 41 3e-04
Arginyl-tRNA synthetase J Contig13 Tmel1495 COG0018 450 1.0e-127
Arginyl-tRNA synthetase J Contig13 Tmel1569 COG0018 37 0.005
Aspartyl/asparaginyl-tRNA synthetase J Contig13 Tmel0527 COG0017 529 1.0e-151
Aspartyl/asparaginyl-tRNA synthetase J Contig13 Tmel1378 COG0017 164 1e-41
Aspartyl/asparaginyl-tRNA synthetase J Contig13 Tmel1620 COG0017 185 1e-47
Aspartyl-tRNA synthetase J Contig13 Tmel0527 COG0173 136 4e-33
Aspartyl-tRNA synthetase J Contig13 Tmel1378 COG0173 109 3e-25
Aspartyl-tRNA synthetase J Contig13 Tmel1620 COG0173 780 0.0
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase J Contig13 Tmel0947 COG0154 463 1.0e-131
Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) J Contig13 Tmel0946 COG0064 621 1.0e-179
Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) J Contig13 Tmel1180 COG0064 33 0.008
Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit J Contig13 Tmel0245 COG0721 59 5e-11
Cysteinyl-tRNA synthetase J Contig13 Tmel0064 COG0215 598 1.0e-172
Cysteinyl-tRNA synthetase J Contig13 Tmel0256 COG0215 56 1e-08
Cysteinyl-tRNA synthetase J Contig13 Tmel0461 COG0215 59 2e-09
Cysteinyl-tRNA synthetase J Contig13 Tmel1187 COG0215 60 4e-10
Cysteinyl-tRNA synthetase J Contig13 Tmel1495 COG0215 38 0.002
Cysteinyl-tRNA synthetase J Contig13 Tmel1569 COG0215 50 9e-07
Glutamyl- and glutaminyl-tRNA synthetase J Contig13 Tmel0065 COG0008 441 1.0e-125
Glutamyl- and glutaminyl-tRNA synthetase J Contig13 Tmel1176 COG0008 409 1.0e-115
Glycyl-tRNA synthetase alpha subunit J Contig13 Tmel0633 COG0752 451 1.0e-128
Glycyl-tRNA synthetase beta subunit J Contig13 Tmel0632 COG0751 638 0.0
Glycyl-tRNA synthetase (class II) J Contig13 Tmel0063 COG0423 45 2e-05
Glycyl-tRNA synthetase (class II) J Contig13 Tmel1327 COG0423 61 3e-10
Histidyl-tRNA synthetase J Contig13 Tmel0063 COG0124 48 1e-06
Histidyl-tRNA synthetase J Contig13 Tmel0744 COG0124 482 1.0e-137
Histidyl-tRNA synthetase J Contig13 Tmel1327 COG0124 63 7e-11
Isoleucyl-tRNA synthetase J Contig13 Tmel0064 COG0060 59 5e-10
Isoleucyl-tRNA synthetase J Contig13 Tmel0256 COG0060 278 1e-75
Isoleucyl-tRNA synthetase J Contig13 Tmel0461 COG0060 1180 0.0
Isoleucyl-tRNA synthetase J Contig13 Tmel1187 COG0060 98 2e-21
Isoleucyl-tRNA synthetase J Contig13 Tmel1569 COG0060 498 1.0e-141
Leucyl-tRNA synthetase J Contig13 Tmel0064 COG0495 65 1e-11
Leucyl-tRNA synthetase J Contig13 Tmel0256 COG0495 1050 0.0
Leucyl-tRNA synthetase J Contig13 Tmel0461 COG0495 229 9e-61
Leucyl-tRNA synthetase J Contig13 Tmel1187 COG0495 95 2e-20
Leucyl-tRNA synthetase J Contig13 Tmel1569 COG0495 284 2e-77
Lysyl-tRNA synthetase (class I) J Contig13 Tmel0065 COG1384 50 4e-07
Lysyl-tRNA synthetase (class I) J Contig13 Tmel0256 COG1384 38 0.003
Lysyl-tRNA synthetase (class I) J Contig13 Tmel1495 COG1384 38 0.001
Lysyl-tRNA synthetase (class II) J Contig13 Tmel0527 COG1190 122 5e-29
Lysyl-tRNA synthetase (class II) J Contig13 Tmel1378 COG1190 646 0.0
Lysyl-tRNA synthetase (class II) J Contig13 Tmel1620 COG1190 121 2e-28
Phenylalanyl-tRNA synthetase alpha subunit J Contig13 Tmel1045 COG0016 416 1.0e-118
Phenylalanyl-tRNA synthetase alpha subunit J Contig13 Tmel1045 COG2024 58 1e-09
Phenylalanyl-tRNA synthetase beta subunit J Contig13 Tmel0809 COG0072 530 1.0e-151
Prolyl-tRNA synthetase J Contig13 Tmel0063 COG0442 529 1.0e-151
Prolyl-tRNA synthetase J Contig13 Tmel0253 COG0442 57 2e-09
Prolyl-tRNA synthetase J Contig13 Tmel0744 COG0442 47 3e-06
Prolyl-tRNA synthetase J Contig13 Tmel1327 COG0442 115 1e-26
Seryl-tRNA synthetase J Contig13 Tmel0063 COG0172 49 1e-06
Seryl-tRNA synthetase J Contig13 Tmel0253 COG0172 577 1.0e-166
Seryl-tRNA synthetase J Contig13 Tmel0889 COG0172 40 0.001
Seryl-tRNA synthetase J Contig13 Tmel1327 COG0172 64 3e-11
Threonyl-tRNA synthetase J Contig13 Tmel0063 COG0441 71 3e-13
Threonyl-tRNA synthetase J Contig13 Tmel0253 COG0441 51 1e-07
Threonyl-tRNA synthetase J Contig13 Tmel0744 COG0441 44 3e-05
Threonyl-tRNA synthetase J Contig13 Tmel0917 COG0441 41 2e-04
Threonyl-tRNA synthetase J Contig13 Tmel1281 COG0441 44 5e-05
Threonyl-tRNA synthetase J Contig13 Tmel1327 COG0441 727 0.0
Tryptophanyl-tRNA synthetase J Contig13 Tmel0177 COG0180 66 7e-12
Tryptophanyl-tRNA synthetase J Contig13 Tmel0320 COG0180 359 1.0e-100
Tyrosyl-tRNA synthetase J Contig13 Tmel0177 COG0162 383 1.0e-107
Tyrosyl-tRNA synthetase J Contig13 Tmel0320 COG0162 76 4e-15
Valyl-tRNA synthetase J Contig13 Tmel0064 COG0525 44 3e-05
Valyl-tRNA synthetase J Contig13 Tmel0256 COG0525 358 1.0e-100
Valyl-tRNA synthetase J Contig13 Tmel0461 COG0525 525 1.0e-150
Valyl-tRNA synthetase J Contig13 Tmel1187 COG0525 114 2e-26
Valyl-tRNA synthetase J Contig13 Tmel1569 COG0525 1200 0.0
Valyl-tRNA synthetase J Contig13 Tmel1715 COG0525 35 0.009
COG Name Group Contig Gene COG ID Score Evalue
Cytosine/adenosine deaminase J Contig13 Tmel0045 COG0590 66 3e-12
Cytosine/adenosine deaminase J Contig13 Tmel1766 COG0590 60 1e-10
Dimethyladenosine transferase (rRNA methylation) J Contig13 Tmel0237 COG0030 233 1e-62
Dimethyladenosine transferase (rRNA methylation) J Contig13 Tmel0700 COG0030 45 3e-06
Dimethyladenosine transferase (rRNA methylation) J Contig13 Tmel1109 COG0030 39 4e-04
Dimethyladenosine transferase (rRNA methylation) J Contig13 Tmel1682 COG0030 38 6e-04
Diphthamide biosynthesis methyltransferase J Contig13 Tmel0279 COG1798 52 4e-08
Diphthamide biosynthesis methyltransferase J Contig13 Tmel0699 COG1798 39 2e-04
Diphthamide biosynthesis methyltransferase J Contig13 Tmel0701 COG1798 52 3e-08
Diphthamide biosynthesis methyltransferase J Contig13 Tmel0702 COG1798 71 1e-13
Diphthamide biosynthesis methyltransferase J Contig13 Tmel0704 COG1798 50 1e-07
Diphthamide biosynthesis methyltransferase J Contig13 Tmel0708 COG1798 54 2e-08
D-Tyr-tRNAtyr deacylase J Contig13 Tmel1315 COG1490 223 5e-60
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) J Contig13 Tmel0386 COG0189 38 0.002
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) J Contig13 Tmel0486 COG0189 38 0.001
Glu-tRNAGln amidotransferase subunit E (contains GAD domain) J Contig13 Tmel0946 COG2511 123 3e-29
Glu-tRNAGln amidotransferase subunit E (contains GAD domain) J Contig13 Tmel1180 COG2511 49 2e-07
Glu-tRNAGln amidotransferase subunit E (contains GAD domain) J Contig13 Tmel1620 COG2511 44 3e-05
GTP-binding protein required for 40S ribosome biogenesis J Contig13 Tmel1160 COG5192 36 0.007
GTP-binding protein required for 40S ribosome biogenesis J Contig13 Tmel1826 COG5192 36 0.003
L-asparaginase/ Glu-tRNAGln amidotransferase subunit D J Contig13 Tmel0883 COG0252 297 6e-82
Methionyl-tRNA synthetase J Contig13 Tmel0064 COG0143 60 4e-10
Methionyl-tRNA synthetase J Contig13 Tmel0256 COG0143 130 3e-31
Methionyl-tRNA synthetase J Contig13 Tmel0461 COG0143 92 2e-19
Methionyl-tRNA synthetase J Contig13 Tmel1187 COG0143 629 0.0
Methionyl-tRNA synthetase J Contig13 Tmel1495 COG0143 36 0.010
Methionyl-tRNA synthetase J Contig13 Tmel1569 COG0143 109 6e-25
Methylase of polypeptide chain release factors J Contig13 Tmel0180 COG2890 43 3e-05
Methylase of polypeptide chain release factors J Contig13 Tmel0187 COG2890 69 3e-13
Methylase of polypeptide chain release factors J Contig13 Tmel0306 COG2890 50 2e-07
Methylase of polypeptide chain release factors J Contig13 Tmel0330 COG2890 49 3e-07
Methylase of polypeptide chain release factors J Contig13 Tmel0405 COG2890 43 6e-05
Methylase of polypeptide chain release factors J Contig13 Tmel0565 COG2890 63 2e-11
Methylase of polypeptide chain release factors J Contig13 Tmel0700 COG2890 34 0.007
Methylase of polypeptide chain release factors J Contig13 Tmel1335 COG2890 37 0.001
Methylase of polypeptide chain release factors J Contig13 Tmel1421 COG2890 185 3e-48
Methylase of polypeptide chain release factors J Contig13 Tmel1544 COG2890 49 7e-07
Methylase of polypeptide chain release factors J Contig13 Tmel1727 COG2890 35 0.006
Methylase of polypeptide chain release factors J Contig13 Tmel1751 COG2890 81 4e-17
N2 N2-dimethylguanosine tRNA methyltransferase J Contig13 Tmel0187 COG1867 37 0.001
N2 N2-dimethylguanosine tRNA methyltransferase J Contig13 Tmel0565 COG1867 56 1e-09
N2 N2-dimethylguanosine tRNA methyltransferase J Contig13 Tmel1544 COG1867 43 3e-05
N2 N2-dimethylguanosine tRNA methyltransferase J Contig13 Tmel1751 COG1867 48 7e-07
N2 N2-dimethylguanosine tRNA methyltransferase J Contig13 Tmel1889 COG1867 38 8e-04
NAD(FAD)-utilizing enzyme possibly involved in translation J Contig13 Tmel0235 COG1206 581 1.0e-167
NAD(FAD)-utilizing enzyme possibly involved in translation J Contig13 Tmel0824 COG1206 94 3e-20
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) J Contig13 Tmel0160 COG1208 120 3e-28
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) J Contig13 Tmel0241 COG1208 184 2e-47
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) J Contig13 Tmel0242 COG1208 139 3e-34
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) J Contig13 Tmel0511 COG1208 123 1e-29
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) J Contig13 Tmel0653 COG1208 55 6e-09
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) J Contig13 Tmel0747 COG1208 205 6e-54
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) J Contig13 Tmel0871 COG1208 70 2e-13
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) J Contig13 Tmel1022 COG1208 51 9e-08
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) J Contig13 Tmel1069 COG1208 130 1e-31
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) J Contig13 Tmel1230 COG1208 44 8e-06
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) J Contig13 Tmel1877 COG1208 54 8e-09
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) J Contig13 Tmel1925 COG1208 47 1e-06
Peptide chain release factor RF-3 J Contig13 Tmel0233 COG4108 102 7e-23
Peptide chain release factor RF-3 J Contig13 Tmel0808 COG4108 37 0.002
Peptide chain release factor RF-3 J Contig13 Tmel0950 COG4108 253 4e-68
Peptide chain release factor RF-3 J Contig13 Tmel0951 COG4108 61 1e-10
Peptide chain release factor RF-3 J Contig13 Tmel1289 COG4108 167 3e-42
Peptide chain release factor RF-3 J Contig13 Tmel1361 COG4108 38 0.002
Peptide chain release factor RF-3 J Contig13 Tmel1865 COG4108 64 3e-11
Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) J Contig13 Tmel0274 COG1185 49 1e-06
Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) J Contig13 Tmel1166 COG1185 71 3e-14
Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) J Contig13 Tmel1513 COG1185 39 8e-04
Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) J Contig13 Tmel1612 COG1185 846 0.0
Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) J Contig13 Tmel1623 COG1185 73 1e-13
Predicted exonuclease of the beta-lactamase fold involved in RNA processing J Contig13 Tmel0078 COG1236 38 7e-04
Predicted exonuclease of the beta-lactamase fold involved in RNA processing J Contig13 Tmel0315 COG1236 42 4e-05
Predicted exonuclease of the beta-lactamase fold involved in RNA processing J Contig13 Tmel0412 COG1236 39 2e-04
Predicted exonuclease of the beta-lactamase fold involved in RNA processing J Contig13 Tmel1227 COG1236 36 0.003
Predicted exonuclease of the beta-lactamase fold involved in RNA processing J Contig13 Tmel1308 COG1236 50 1e-07
Predicted exonuclease of the beta-lactamase fold involved in RNA processing J Contig13 Tmel1423 COG1236 34 0.010
Predicted GTPase probable translation factor J Contig13 Tmel0372 COG0012 108 1e-24
Predicted GTPase probable translation factor J Contig13 Tmel0808 COG0012 37 0.002
Predicted GTPase probable translation factor J Contig13 Tmel1047 COG0012 259 3e-70
Predicted GTPase probable translation factor J Contig13 Tmel1316 COG0012 42 2e-04
Predicted GTPase probable translation factor J Contig13 Tmel1336 COG0012 41 2e-04
Predicted GTPase probable translation factor J Contig13 Tmel1623 COG0012 39 0.001
Predicted GTPase probable translation factor J Contig13 Tmel1739 COG0012 39 7e-04
Predicted GTPase probable translation factor J Contig13 Tmel1759 COG0012 35 0.009
Predicted ribosomal protein J Contig13 Tmel1035 COG2868 68 2e-13
Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) J Contig13 Tmel1166 COG1096 33 0.010
Predicted RNA-binding protein J Contig13 Tmel1039 COG1491 41 6e-04
Predicted RNA methylase J Contig13 Tmel0180 COG2263 36 0.003
Predicted RNA methylase J Contig13 Tmel0187 COG2263 67 1e-12
Predicted RNA methylase J Contig13 Tmel0306 COG2263 35 0.005
Predicted RNA methylase J Contig13 Tmel0330 COG2263 42 3e-05
Predicted RNA methylase J Contig13 Tmel0565 COG2263 60 8e-11
Predicted RNA methylase J Contig13 Tmel1544 COG2263 43 3e-05
Predicted RNA methylase J Contig13 Tmel1751 COG2263 42 3e-05
Predicted rRNA methylase J Contig13 Tmel0417 COG1189 40 1e-04
Predicted rRNA methylase J Contig13 Tmel0867 COG1189 41 7e-05
Predicted rRNA methylase J Contig13 Tmel0919 COG1189 44 1e-05
Predicted rRNA methylase J Contig13 Tmel0935 COG1189 288 4e-79
Predicted rRNA methylase J Contig13 Tmel0980 COG1189 46 3e-06
Predicted rRNA methylase J Contig13 Tmel0989 COG1189 36 0.003
Predicted rRNA methylase J Contig13 Tmel1380 COG1189 34 0.003
Predicted rRNA methylase (SpoU class) J Contig13 Tmel1517 COG0219 65 5e-12
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain J Contig13 Tmel0718 COG0482 56 4e-09
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain J Contig13 Tmel1006 COG0482 38 0.001
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain J Contig13 Tmel1404 COG0482 53 8e-08
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain J Contig13 Tmel1559 COG0482 275 3e-75
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain J Contig13 Tmel1605 COG0482 37 0.002
Pseudouridine synthase J Contig13 Tmel1046 COG0130 187 1e-48
Pseudouridylate synthase 23S RNA-specific J Contig13 Tmel0417 COG0564 51 9e-08
Pseudouridylate synthase 23S RNA-specific J Contig13 Tmel0867 COG0564 65 7e-12
Pseudouridylate synthase 23S RNA-specific J Contig13 Tmel0919 COG0564 228 4e-61
Pseudouridylate synthase 23S RNA-specific J Contig13 Tmel0980 COG0564 36 0.002
Pseudouridylate synthase 23S RNA-specific J Contig13 Tmel0989 COG0564 323 1e-89
Pseudouridylate synthase 23S RNA-specific J Contig13 Tmel1380 COG0564 37 4e-04
Pseudouridylate synthase J Contig13 Tmel0937 COG0101 294 3e-81
Putative translation factor (SUA5) J Contig13 Tmel0231 COG0009 224 9e-60
Putative translation initiation inhibitor yjgF family J Contig13 Tmel0521 COG0251 130 3e-32
Queuine/archaeosine tRNA-ribosyltransferase J Contig13 Tmel1416 COG0343 481 1.0e-137
Ribonuclease D J Contig13 Tmel1917 COG0349 41 5e-04
Ribonuclease G and E J Contig13 Tmel1764 COG1530 304 1e-83
Ribosomal protein L11 methylase J Contig13 Tmel0187 COG2264 195 4e-51
Ribosomal protein L11 methylase J Contig13 Tmel0565 COG2264 44 7e-06
Ribosomal protein L11 methylase J Contig13 Tmel1421 COG2264 41 7e-05
Ribosomal protein L11 methylase J Contig13 Tmel1544 COG2264 40 4e-04
Ribosomal protein L11 methylase J Contig13 Tmel1751 COG2264 64 8e-12

RIBOSOMAL PROTEINS - LARGE SUBUNIT

COG Name Group Contig Gene COG ID Score Evalue
Ribosomal protein HS6-type (S12/L30/L7a) J Contig13 Tmel0530 COG1358 51 2e-08
Ribosomal protein L10 J Contig13 Tmel0504 COG0244 129 1e-31
Ribosomal protein L11 J Contig13 Tmel0642 COG0080 196 4e-52
Ribosomal protein L13 J Contig13 Tmel1032 COG0102 193 5e-51
Ribosomal protein L14 J Contig13 Tmel0963 COG0093 181 1e-47
Ribosomal protein L15 J Contig13 Tmel0972 COG0200 145 2e-36
Ribosomal protein L16/L10E J Contig13 Tmel0960 COG0197 183 5e-48
Ribosomal protein L17 J Contig13 Tmel0982 COG0203 120 3e-29
Ribosomal protein L18 J Contig13 Tmel0969 COG0256 143 3e-36
Ribosomal protein L18E J Contig13 Tmel0972 COG1727 39 1e-04
Ribosomal protein L19 J Contig13 Tmel1800 COG0335 131 2e-32
Ribosomal protein L1 J Contig13 Tmel0643 COG0081 297 7e-82
Ribosomal protein L20 J Contig13 Tmel0925 COG0292 128 1e-31
Ribosomal protein L21 J Contig13 Tmel1036 COG0261 104 1e-24
Ribosomal protein L22 J Contig13 Tmel0958 COG0091 138 2e-34
Ribosomal protein L23 J Contig13 Tmel0955 COG0089 93 3e-21
Ribosomal protein L24 J Contig13 Tmel0964 COG0198 99 3e-23
Ribosomal protein L25 (general stress protein Ctc) J Contig13 Tmel0162 COG1825 80 1e-16
Ribosomal protein L27 J Contig13 Tmel1034 COG0211 106 4e-25
Ribosomal protein L28 J Contig13 Tmel1027 COG0227 65 8e-13
Ribosomal protein L29 J Contig13 Tmel0961 COG0255 46 4e-07
Ribosomal protein L2 J Contig13 Tmel0956 COG0090 390 1.0e-110
Ribosomal protein L30/L7E J Contig13 Tmel0971 COG1841 62 9e-12
Ribosomal protein L31 J Contig13 Tmel1165 COG0254 66 3e-13
Ribosomal protein L32 J Contig13 Tmel0473 COG0333 53 4e-09
Ribosomal protein L33 J Contig13 Tmel0639 COG0267 43 4e-06
Ribosomal protein L35 J Contig13 Tmel0924 COG0291 37 2e-04
Ribosomal protein L36 J Contig13 Tmel0977 COG0257 42 1e-05
Ribosomal protein L3 J Contig13 Tmel0953 COG0087 252 1e-68
Ribosomal protein L4 J Contig13 Tmel0954 COG0088 233 6e-63
Ribosomal protein L5 J Contig13 Tmel0965 COG0094 259 1e-70
Ribosomal protein L6P/L9E J Contig13 Tmel0968 COG0097 209 1e-55
Ribosomal protein L7/L12 J Contig13 Tmel0503 COG0222 107 3e-25
Ribosomal protein L9 J Contig13 Tmel1422 COG0359 125 1e-30

RIBOSOMAL PROTEINS - SMALL SUBUNIT

COG Name Group Contig Gene COG ID Score Evalue
Predicted RNA binding protein (contains ribosomal protein S1 domain) J Contig13 Tmel0274 COG1098 47 4e-06
Predicted RNA binding protein (contains ribosomal protein S1 domain) J Contig13 Tmel1166 COG1098 91 2e-20
Predicted RNA binding protein (contains ribosomal protein S1 domain) J Contig13 Tmel1513 COG1098 38 0.003
Predicted RNA binding protein (contains ribosomal protein S1 domain) J Contig13 Tmel1612 COG1098 60 6e-10
Predicted RNA binding protein (contains ribosomal protein S1 domain) J Contig13 Tmel1623 COG1098 59 9e-10
Ribosomal protein S10 J Contig13 Tmel0952 COG0051 138 9e-35
Ribosomal protein S11 J Contig13 Tmel0979 COG0100 158 1e-40
Ribosomal protein S12 J Contig13 Tmel0948 COG0048 182 8e-48
Ribosomal protein S13 J Contig13 Tmel0978 COG0099 164 1e-42
Ribosomal protein S14 J Contig13 Tmel0966 COG0199 66 5e-13
Ribosomal protein S15P/S13E J Contig13 Tmel0061 COG0184 103 2e-24
Ribosomal protein S16 J Contig13 Tmel1805 COG0228 99 6e-23
Ribosomal protein S17 J Contig13 Tmel0962 COG0186 100 4e-23
Ribosomal protein S18 J Contig13 Tmel0638 COG0238 80 3e-17
Ribosomal protein S19 J Contig13 Tmel0957 COG0185 126 3e-31
Ribosomal protein S1 J Contig13 Tmel0274 COG0539 46 8e-06
Ribosomal protein S1 J Contig13 Tmel1166 COG0539 49 1e-07
Ribosomal protein S1 J Contig13 Tmel1513 COG0539 40 7e-04
Ribosomal protein S1 J Contig13 Tmel1612 COG0539 53 1e-07
Ribosomal protein S1 J Contig13 Tmel1623 COG0539 323 3e-89
Ribosomal protein S20 J Contig13 Tmel1755 COG0268 55 8e-10
Ribosomal protein S2 J Contig13 Tmel0926 COG0052 348 3e-97
Ribosomal protein S3 J Contig13 Tmel0959 COG0092 221 3e-59
Ribosomal protein S4 and related protein J Contig13 Tmel0417 COG0522 41 5e-05
Ribosomal protein S4 and related protein J Contig13 Tmel0919 COG0522 42 5e-05
Ribosomal protein S4 and related protein J Contig13 Tmel0935 COG0522 40 2e-04
Ribosomal protein S4 and related protein J Contig13 Tmel0980 COG0522 202 2e-53
Ribosomal protein S5 J Contig13 Tmel0970 COG0098 187 4e-49
Ribosomal protein S6 J Contig13 Tmel0636 COG0360 73 6e-15
Ribosomal protein S7 J Contig13 Tmel0949 COG0049 194 2e-51
Ribosomal protein S8 J Contig13 Tmel0967 COG0096 179 7e-47
Ribosomal protein S9 J Contig13 Tmel1031 COG0103 168 2e-43
COG Name Group Contig Gene COG ID Score Evalue
Ribosome-associated chaperone zuotin J Contig13 Tmel0087 COG5269 61 1e-10
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) J Contig13 Tmel0919 COG1188 35 0.005
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) J Contig13 Tmel0980 COG1188 38 4e-04
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) J Contig13 Tmel0989 COG1188 44 2e-05
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) J Contig13 Tmel1380 COG1188 67 2e-13
Ribosome-associated protein Y (PSrp-1) J Contig13 Tmel0286 COG1544 61 5e-11
Ribosome-binding factor A J Contig13 Tmel1498 COG0858 78 3e-16
RimM protein required for 16S rRNA processing J Contig13 Tmel1803 COG0806 128 3e-31
RNA-binding protein Rrp4 and related protein (contain S1 domain and KH domain) J Contig13 Tmel1612 COG1097 38 0.003
RNase PH J Contig13 Tmel1612 COG0689 93 4e-20
RNase PH-related exoribonuclease J Contig13 Tmel1612 COG2123 53 9e-08
RNase P protein component J Contig13 Tmel1629 COG0594 73 8e-15
rRNA methylase J Contig13 Tmel1517 COG0565 49 2e-07
rRNA methylase J Contig13 Tmel1517 COG0566 221 3e-59
rRNA methylase J Contig13 Tmel1801 COG0566 36 0.002
S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) J Contig13 Tmel0060 COG0809 478 1.0e-136
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase J Contig13 Tmel0187 COG2265 41 9e-05
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase J Contig13 Tmel0330 COG2265 47 9e-07
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase J Contig13 Tmel0565 COG2265 47 8e-07
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase J Contig13 Tmel0700 COG2265 45 3e-06
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase J Contig13 Tmel1544 COG2265 356 2e-99
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase J Contig13 Tmel1554 COG2265 35 0.007
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase J Contig13 Tmel1682 COG2265 34 0.010
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase J Contig13 Tmel1751 COG2265 46 2e-06
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase J Contig13 Tmel1889 COG2265 53 4e-08
Selenocysteine-specific translation elongation factor J Contig13 Tmel0233 COG3276 79 9e-16
Selenocysteine-specific translation elongation factor J Contig13 Tmel0372 COG3276 36 0.005
Selenocysteine-specific translation elongation factor J Contig13 Tmel0808 COG3276 44 2e-05
Selenocysteine-specific translation elongation factor J Contig13 Tmel0950 COG3276 53 5e-08
Selenocysteine-specific translation elongation factor J Contig13 Tmel0951 COG3276 196 2e-51
Selenocysteine-specific translation elongation factor J Contig13 Tmel1289 COG3276 46 1e-05
Selenocysteine-specific translation elongation factor J Contig13 Tmel1361 COG3276 37 0.002
Selenocysteine-specific translation elongation factor J Contig13 Tmel1494 COG3276 36 0.002
Selenocysteine-specific translation elongation factor J Contig13 Tmel1739 COG3276 38 0.002
Selenocysteine-specific translation elongation factor J Contig13 Tmel1865 COG3276 82 1e-16
Superfamily II DNA and RNA helicase J Contig13 Tmel0034 COG0513 76 8e-15
Superfamily II DNA and RNA helicase J Contig13 Tmel0276 COG0513 41 5e-04
Superfamily II DNA and RNA helicase J Contig13 Tmel0367 COG0513 72 2e-13
Superfamily II DNA and RNA helicase J Contig13 Tmel0589 COG0513 39 0.002
Superfamily II DNA and RNA helicase J Contig13 Tmel0838 COG0513 390 1.0e-109
Superfamily II DNA and RNA helicase J Contig13 Tmel1686 COG0513 60 6e-10
Superfamily II DNA and RNA helicase J Contig13 Tmel1847 COG0513 73 7e-14
Superfamily II DNA and RNA helicase J Contig13 Tmel1855 COG0513 78 4e-15
Translation elongation factor EF-1alpha (GTPase) J Contig13 Tmel0233 COG5256 91 2e-19
Translation elongation factor EF-1alpha (GTPase) J Contig13 Tmel0950 COG5256 68 2e-12
Translation elongation factor EF-1alpha (GTPase) J Contig13 Tmel0951 COG5256 261 7e-71
Translation elongation factor EF-1alpha (GTPase) J Contig13 Tmel1289 COG5256 59 9e-10
Translation elongation factor EF-1alpha (GTPase) J Contig13 Tmel1361 COG5256 42 6e-05
Translation elongation factor EF-1alpha (GTPase) J Contig13 Tmel1865 COG5256 80 5e-16

TRANSLATION FACTORS AND ENZYMES INVOLVED IN TRANSLATION

COG Name Group Contig Gene COG ID Score Evalue
GTPase - translation elongation factors J Contig13 Tmel0233 COG0050 87 4e-18
GTPase - translation elongation factors J Contig13 Tmel0950 COG0050 66 6e-12
GTPase - translation elongation factors J Contig13 Tmel0951 COG0050 653 0.0
GTPase - translation elongation factors J Contig13 Tmel1289 COG0050 47 4e-06
GTPase - translation elongation factors J Contig13 Tmel1865 COG0050 78 1e-15
Methionine aminopeptidase J Contig13 Tmel0299 COG0024 96 4e-21
Methionine aminopeptidase J Contig13 Tmel0975 COG0024 281 4e-77
Methionyl-tRNA formyltransferase J Contig13 Tmel0236 COG0223 315 3e-87
Methionyl-tRNA formyltransferase J Contig13 Tmel0388 COG0223 87 8e-19
Methionyl-tRNA formyltransferase J Contig13 Tmel0510 COG0223 54 6e-09
N-formylmethionyl-tRNA deformylase J Contig13 Tmel0837 COG0242 176 5e-46
Peptidyl-tRNA hydrolase J Contig13 Tmel0163 COG0193 160 5e-41
Predicted translation initiation factor 2B subunit eIF-2B alpha/beta/delta family J Contig13 Tmel0254 COG0182 500 1.0e-143
Predicted translation initiation factor 2B subunit eIF-2B alpha/beta/delta family J Contig13 Tmel1178 COG0182 56 2e-09
Protein chain release factor A J Contig13 Tmel0253 COG0216 36 0.006
Protein chain release factor A J Contig13 Tmel0889 COG0216 37 0.009
Protein chain release factor A J Contig13 Tmel1395 COG0216 426 1.0e-120
Protein chain release factor A J Contig13 Tmel1549 COG0216 291 6e-80
Protein chain release factor B J Contig13 Tmel1395 COG1186 224 6e-60
Protein chain release factor B J Contig13 Tmel1549 COG1186 364 1.0e-102
Ribosome recycling factor J Contig13 Tmel1278 COG0233 216 8e-58
Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) J Contig13 Tmel0845 COG0231 138 3e-34
Translation elongation factors (GTPase) J Contig13 Tmel0233 COG0480 144 1e-35
Translation elongation factors (GTPase) J Contig13 Tmel0808 COG0480 40 2e-04
Translation elongation factors (GTPase) J Contig13 Tmel0950 COG0480 953 0.0
Translation elongation factors (GTPase) J Contig13 Tmel0951 COG0480 95 1e-20
Translation elongation factors (GTPase) J Contig13 Tmel1289 COG0480 679 0.0
Translation elongation factors (GTPase) J Contig13 Tmel1624 COG0480 37 0.003
Translation elongation factors (GTPase) J Contig13 Tmel1865 COG0480 92 2e-19
Translation elongation factor Ts J Contig13 Tmel0786 COG0264 150 6e-38
Translation initiation factor 1 (IF-1) J Contig13 Tmel0976 COG0361 100 2e-23
Translation initiation factor 2 alpha subunit (eIF-2alpha) J Contig13 Tmel1166 COG1093 56 7e-10
Translation initiation factor 2 alpha subunit (eIF-2alpha) J Contig13 Tmel1623 COG1093 56 1e-08
Translation initiation factor 2B subunit eIF-2B alpha/beta/delta family J Contig13 Tmel0254 COG1184 181 9e-47
Translation initiation factor 2B subunit eIF-2B alpha/beta/delta family J Contig13 Tmel1178 COG1184 86 2e-18
Translation initiation factor 2 (IF-2; GTPase) J Contig13 Tmel0233 COG0532 95 1e-20
Translation initiation factor 2 (IF-2; GTPase) J Contig13 Tmel0808 COG0532 36 0.003
Translation initiation factor 2 (IF-2; GTPase) J Contig13 Tmel0950 COG0532 71 4e-13
Translation initiation factor 2 (IF-2; GTPase) J Contig13 Tmel0951 COG0532 78 1e-15
Translation initiation factor 2 (IF-2; GTPase) J Contig13 Tmel1289 COG0532 45 2e-05
Translation initiation factor 2 (IF-2; GTPase) J Contig13 Tmel1361 COG0532 39 5e-04
Translation initiation factor 2 (IF-2; GTPase) J Contig13 Tmel1494 COG0532 48 4e-07
Translation initiation factor 2 (IF-2; GTPase) J Contig13 Tmel1624 COG0532 41 2e-04
Translation initiation factor 2 (IF-2; GTPase) J Contig13 Tmel1739 COG0532 39 8e-04
Translation initiation factor 2 (IF-2; GTPase) J Contig13 Tmel1865 COG0532 583 1.0e-167
Translation initiation factor 3 (IF-3) J Contig13 Tmel0923 COG0290 173 3e-45
COG Name Group Contig Gene COG ID Score Evalue
Translation initiation factor 2 gamma subunit (eIF-2gamma; GTPase) J Contig13 Tmel0233 COG5257 65 1e-11
Translation initiation factor 2 gamma subunit (eIF-2gamma; GTPase) J Contig13 Tmel0951 COG5257 154 9e-39
Translation initiation factor 2 gamma subunit (eIF-2gamma; GTPase) J Contig13 Tmel1624 COG5257 40 3e-04
Translation initiation factor 2 gamma subunit (eIF-2gamma; GTPase) J Contig13 Tmel1865 COG5257 73 1e-13
tRNA(1-methyladenosine) methyltransferase and related methyltransferase J Contig13 Tmel0187 COG2519 46 4e-06
tRNA(1-methyladenosine) methyltransferase and related methyltransferase J Contig13 Tmel0225 COG2519 276 1e-75
tRNA(1-methyladenosine) methyltransferase and related methyltransferase J Contig13 Tmel0237 COG2519 36 0.002
tRNA(1-methyladenosine) methyltransferase and related methyltransferase J Contig13 Tmel0565 COG2519 36 0.002
tRNA(1-methyladenosine) methyltransferase and related methyltransferase J Contig13 Tmel1581 COG2519 36 0.003
tRNA(1-methyladenosine) methyltransferase and related methyltransferase J Contig13 Tmel1682 COG2519 65 3e-12
tRNA and rRNA cytosine-C5-methylase J Contig13 Tmel0225 COG0144 41 8e-05
tRNA and rRNA cytosine-C5-methylase J Contig13 Tmel0565 COG0144 47 8e-07
tRNA and rRNA cytosine-C5-methylase J Contig13 Tmel1514 COG0144 239 4e-64
tRNA and rRNA cytosine-C5-methylase J Contig13 Tmel1544 COG0144 43 3e-05
tRNA and rRNA cytosine-C5-methylase J Contig13 Tmel1889 COG0144 36 0.005
tRNA delta(2)-isopentenylpyrophosphate transferase J Contig13 Tmel1398 COG0324 306 1e-84
tRNA-dihydrouridine synthase J Contig13 Tmel0008 COG0042 43 7e-05
tRNA-dihydrouridine synthase J Contig13 Tmel0121 COG0042 44 2e-05
tRNA-dihydrouridine synthase J Contig13 Tmel0243 COG0042 43 3e-05
tRNA-dihydrouridine synthase J Contig13 Tmel0267 COG0042 61 1e-10
tRNA-dihydrouridine synthase J Contig13 Tmel0374 COG0042 254 4e-69
tRNA-dihydrouridine synthase J Contig13 Tmel1578 COG0042 36 0.005
tRNA-dihydrouridine synthase J Contig13 Tmel1859 COG0042 39 4e-04
tRNA-(guanine-N1)-methyltransferase J Contig13 Tmel1802 COG0336 326 9e-91
tRNA nucleotidyltransferase/poly(A) polymerase J Contig13 Tmel1425 COG0617 186 9e-48
Truncated possibly inactive lysyl-tRNA synthetase (class II) J Contig13 Tmel0527 COG2269 69 8e-13
Truncated possibly inactive lysyl-tRNA synthetase (class II) J Contig13 Tmel1378 COG2269 190 2e-49
Truncated possibly inactive lysyl-tRNA synthetase (class II) J Contig13 Tmel1620 COG2269 67 4e-12

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