Genome Channel Computational Biosciences
HomeAbout UsAnalysis ToolsInformation ResourcesProjects and Research
[space] Gene Channel • Generation Microbial Gene Prediction System • Grail (Microbial Gene Prediction System Internet Link) • GrailEXP • Genome Analysis Pipeline • DomainParser • PROSPECT (PROtein Structure Prediction and Evaluation Computer Toolkit) [space]
-

Taxonomic Distribution of the top KEGG Hits

Based on Blast against KEGG

Kingdom Category Genus/Species Count
    40
Archaea     64
    40
  Crenarchaeota   6
    Hyperthermus butylicus (hbu) 2
    Sulfolobus acidocaldarius (sai) 2
    Staphylothermus marinus (smr) 1
    Sulfolobus solfataricus (sso) 1
  Euryarchaeota   58
    Archaeoglobus fulgidus (afu) 2
    Methanosarcina acetivorans (mac) 1
    Methanosarcina barkeri (mba) 3
    Candidatus Methanoregula boonei (mbn) 2
    Methanococcoides burtonii (mbu) 1
    Methanoculleus marisnigri (mem) 1
    Methanospirillum hungatei (mhu) 1
    Methanococcus jannaschii (mja) 11
    Methanosarcina mazei (mma) 3
    Methanococcus maripaludis C6 (mmx) 1
    Methanobrevibacter smithii ATCC 35061 (msi) 3
    Methanosphaera stadtmanae (mst) 5
    Methanobacterium thermoautotrophicum (mth) 1
    Methanosaeta thermophila (mtp) 1
    Methanococcus vannielii (mvn) 1
    Pyrococcus abyssi (pab) 8
    Pyrococcus furiosus (pfu) 5
    Pyrococcus horikoshii (pho) 1
    Picrophilus torridus (pto) 1
    Thermococcus kodakaraensis (tko) 5
    Thermoplasma volcanium (tvo) 1
Bacteria     1658
  Acidobacteria   1
    Solibacter usitatus (sus) 1
  Bacteroides   3
    Bacteroides fragilis NCTC9343 (bfs) 1
    Cytophaga hutchinsonii (chu) 1
    Gramella forsetii (gfo) 1
  Cyanobacteria   2
    Anabaena sp. PCC7120 (ana) 1
    Gloeobacter violaceus (gvi) 1
  Deinococcus-Thermus   2
    Thermus thermophilus HB27 (tth) 1
    Thermus thermophilus HB8 (ttj) 1
  Firmicutes   105
    Alkaliphilus metalliredigens (amt) 3
    Alkaliphilus oremlandii (aoe) 3
    Bacillus cereus ATCC 14579 (bce) 1
    Bacillus cereus subsp. cytotoxis NVH 391-98 (bcy) 1
    Bacillus halodurans (bha) 1
    Bacillus licheniformis DSM13 (bld) 2
    Bacillus thuringiensis 97-27 (btk) 1
    Bacillus thuringiensis Al Hakam (btl) 1
    Bacillus weihenstephanensis (bwe) 1
    Clostridium acetobutylicum (cac) 9
    Clostridium beijerinckii (cbe) 4
    Clostridium botulinum F (cbf) 5
    Clostridium botulinum A Hall (cbh) 2
    Clostridium difficile (cdf) 7
    Carboxydothermus hydrogenoformans (chy) 10
    Clostridium kluyveri (ckl) 4
    Clostridium novyi (cno) 6
    Clostridium perfringens 13 (cpe) 1
    Clostridium perfringens ATCC 13124 (cpf) 1
    Clostridium perfringens SM101 (cpr) 2
    Caldicellulosiruptor saccharolyticus (csc) 7
    Clostridium tetani E88 (ctc) 4
    Clostridium thermocellum (cth) 3
    Desulfotomaculum reducens (drm) 3
    Geobacillus kaustophilus (gka) 2
    Geobacillus thermodenitrificans (gtn) 2
    Lactobacillus casei (lca) 1
    Mycoplasma pneumoniae (mpn) 1
    Oceanobacillus iheyensis (oih) 2
    Oenococcus oeni (ooe) 1
    Streptococcus agalactiae 2603 (serotype V) (sag) 1
    Staphylococcus aureus MSSA476 (sas) 1
    Streptococcus suis 98HAH33 (ssv) 1
    Streptococcus thermophilus LMG18311 (stl) 1
    Syntrophomonas wolfei (swo) 1
    Thermoanaerobacter tengcongensis (tte) 8
    Ureaplasma urealyticum (uur) 1
  Fusobacteria   1
    Fusobacterium nucleatum (fnu) 1
  Green nonsulfur bacteria   7
    Chloroflexus aurantiacus (cau) 2
    Dehalococcoides sp. BAV1 (deb) 1
    Herpetosiphon aurantiacus (hau) 2
    Roseiflexus sp. RS-1 (rrs) 2
  Green sulfur bacteria   6
    Chlorobium chlorochromatii (cch) 4
    Prosthecochloris vibrioformis (pvi) 2
  Hyperthermophilic bacteria   1502
    Aquifex aeolicus (aae) 2
    Fervidobacterium nodosum (fno) 1036
    Petrotoga mobilis (pmo) 62
    Thermotoga lettingae (tle) 138
    Thermotoga maritima (tma) 116
    Thermotoga petrophila (tpt) 148
  Proteobacteria   24
    Buchnera aphidicola Cc (bcc) 1
    Campylobacter hominis ATCC BAA-381 (cha) 2
    Citrobacter koseri ATCC BAA-895 (cko) 1
    Desulfovibrio desulfuricans (dde) 3
    Desulfotalea psychrophila (dps) 1
    Erythrobacter litoralis (eli) 1
    Francisella tularensis subsp. novicida U112 (ftn) 1
    Geobacter metallireducens (gme) 1
    Hahella chejuensis (hch) 1
    Magnetospirillum magneticum (mag) 1
    Methylobacillus flagellatus (mfa) 1
    Myxococcus xanthus (mxa) 1
    Nitratiruptor sp. SB155-2 (nis) 2
    Psychrobacter cryohalolentis (pcr) 1
    Pelobacter propionicus (ppd) 1
    Shewanella baltica OS185 (sbm) 1
    Sorangium cellulosum (scl) 1
    Syntrophobacter fumaroxidans (sfu) 1
    Shewanella sediminis (sse) 1
    Sulfurovum sp. NBC37-1 (sun) 1
  Spirochete   5
    Leptospira borgpetersenii L550 (lbl) 1
    Leptospira interrogans serovar Copenhageni (lic) 1
    Treponema denticola (tde) 3
Eukaryotes     6
  Plants   1
    Oryza sativa japonica (Japanese rice) (osa) 1
  Protists   5
    Dictyostelium discoideum (ddi) 2
    Plasmodium falciparum (pfa) 1
    Plasmodium yoelii (pyo) 1
    Tetrahymena thermophila (tet) 1
NULL     115
TOTAL     1883

-
SiteMap      Feedback      Life Sciences Division      ORNL     Disclaimer     Webmaster