Genome Channel Computational Biosciences
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Cell Motility and Secretion

COG Name Group Contig Gene COG ID Score Evalue
ABC-type uncharacterized transport system involved in gliding motility auxiliary component N BX548020 SYNW2303 COG3225 40 0.001
Chemotaxis protein histidine kinase and related kinase N BX548020 SYNW0551 COG0643 36 0.007
Chemotaxis protein histidine kinase and related kinase N BX548020 SYNW0753 COG0643 39 5e-04
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain N BX548020 SYNW0126 COG2201 63 3e-11
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain N BX548020 SYNW0808 COG2201 54 9e-09
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain N BX548020 SYNW0904 COG2201 37 0.001
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain N BX548020 SYNW0947 COG2201 54 1e-08
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain N BX548020 SYNW1875 COG2201 34 0.009
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain N BX548020 SYNW2236 COG2201 58 6e-10
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain N BX548020 SYNW2246 COG2201 71 5e-14
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain N BX548020 SYNW2289 COG2201 70 1e-13

FLAGELLUM STRUCTURE AND BIOGENESIS

COG Name Group Contig Gene COG ID Score Evalue
Flagellar biosynthesis/type III secretory pathway ATPase N BX548020 SYNW0494 COG1157 209 5e-55
Flagellar biosynthesis/type III secretory pathway ATPase N BX548020 SYNW0512 COG1157 228 7e-61
Flagellar GTP-binding protein N BX548020 SYNW0011 COG1419 95 8e-21
Flagellar GTP-binding protein N BX548020 SYNW1618 COG1419 89 7e-19
Flagellar GTP-binding protein N BX548020 SYNW1831 COG1419 38 4e-04
Predicted ATPase involved in biogenesis of flagella N BX548020 SYNW0550 COG2874 59 9e-10
Predicted ATPase involved in biogenesis of flagella N BX548020 SYNW2062 COG2874 45 1e-05
Predicted ATPase involved in biogenesis of flagella N BX548020 SYNW2245 COG2874 54 3e-08
COG Name Group Contig Gene COG ID Score Evalue
Methyl-accepting chemotaxis protein N BX548020 SYNW0551 COG0840 41 3e-04
Methylase of chemotaxis methyl-accepting protein N BX548020 SYNW0487 COG1352 40 3e-04
Methylase of chemotaxis methyl-accepting protein N BX548020 SYNW1273 COG1352 38 0.003
Tfp pilus assembly protein ATPase PilU N BX548020 SYNW0022 COG5008 115 9e-27
Tfp pilus assembly protein ATPase PilU N BX548020 SYNW1831 COG5008 119 2e-28
Tfp pilus assembly protein ATPase PilU N BX548020 SYNW1832 COG5008 141 3e-35
Tfp pilus assembly protein FimV N BX548020 SYNW1957 COG3170 35 0.006
Tfp pilus assembly protein FimV N BX548020 SYNW2303 COG3170 42 4e-04
Tfp pilus assembly protein PilF N BX548020 SYNW0006 COG3063 43 3e-05
Tfp pilus assembly protein PilF N BX548020 SYNW0136 COG3063 41 6e-05
Tfp pilus assembly protein PilF N BX548020 SYNW0986 COG3063 41 3e-04
Tfp pilus assembly protein PilF N BX548020 SYNW0989 COG3063 47 3e-06
Tfp pilus assembly protein PilF N BX548020 SYNW1273 COG3063 63 1e-10
Tfp pilus assembly protein PilF N BX548020 SYNW2209 COG3063 48 1e-06
Tfp pilus assembly protein PilF N BX548020 SYNW2240 COG3063 50 1e-07
Tfp pilus assembly protein pilus retraction ATPase PilT N BX548020 SYNW0022 COG2805 178 2e-45
Tfp pilus assembly protein pilus retraction ATPase PilT N BX548020 SYNW1831 COG2805 199 1e-52
Tfp pilus assembly protein pilus retraction ATPase PilT N BX548020 SYNW1832 COG2805 215 1e-57
Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB N BX548020 SYNW0022 COG2804 482 1.0e-137
Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB N BX548020 SYNW1831 COG2804 89 2e-19
Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB N BX548020 SYNW1832 COG2804 106 7e-25
Type II secretory pathway component PulD N BX548020 SYNW2336 COG1450 103 1e-23
Type II secretory pathway component PulF N BX548020 SYNW0018 COG1459 297 1e-81
Type II secretory pathway prepilin signal peptidase PulO and related peptidase N BX548020 SYNW0787 COG1989 119 3e-28
Type IV secretory pathway VirB11 protein involved in flagella biosynthesis N BX548020 SYNW0022 COG0630 72 1e-13
Type IV secretory pathway VirB11 protein involved in flagella biosynthesis N BX548020 SYNW1831 COG0630 40 1e-04
Type IV secretory pathway VirB11 protein involved in flagella biosynthesis N BX548020 SYNW1832 COG0630 54 7e-09
Type IV secretory pathway VirB11 protein involved in flagella biosynthesis N BX548020 SYNW2064 COG0630 40 6e-04

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