Transcription

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
AraC-type DNA-binding domain-containing protein	K	BX548020	SYNW1592	COG2207	58	5e-10

BASAL TRANSCRIPTION FACTORS

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Predicted transcription factor homolog of eukaryotic MBF1	K	BX548020	SYNW1845	COG1813	36	0.002
Transcription antiterminator	K	BX548020	SYNW2344	COG0250	152	2e-38
Transcription elongation factor	K	BX548020	SYNW0600	COG0195	170	3e-43
Transcription termination factor	K	BX548020	SYNW0010	COG0781	73	1e-14
Transcription termination factor	K	BX548020	SYNW0512	COG1158	54	2e-08
Transcription termination factor	K	BX548020	SYNW1679	COG0781	40	4e-04

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
DNA-binding HTH domain-containing protein	K	BX548020	SYNW0566	COG2771	53	2e-08
DNA-binding HTH domain-containing protein	K	BX548020	SYNW1380	COG2771	58	4e-10
DNA-binding HTH domain-containing protein	K	BX548020	SYNW1385	COG2771	58	7e-10
DNA-binding HTH domain-containing protein	K	BX548020	SYNW1973	COG2771	48	2e-07
DNA-binding HTH domain-containing protein	K	BX548020	SYNW2268	COG2771	73	5e-15
DNA-binding HTH domain-containing protein	K	BX548020	SYNW2289	COG2771	64	7e-12
DNA-binding winged-HTH domains	K	BX548020	SYNW0126	COG3710	65	4e-12
DNA-binding winged-HTH domains	K	BX548020	SYNW0808	COG3710	57	1e-09
DNA-binding winged-HTH domains	K	BX548020	SYNW0904	COG3710	64	1e-11
DNA-binding winged-HTH domains	K	BX548020	SYNW0947	COG3710	68	4e-13
DNA-binding winged-HTH domains	K	BX548020	SYNW1598	COG3710	73	2e-14
DNA-binding winged-HTH domains	K	BX548020	SYNW1875	COG3710	60	1e-10
DNA-binding winged-HTH domains	K	BX548020	SYNW2236	COG3710	59	3e-10
DNA-binding winged-HTH domains	K	BX548020	SYNW2246	COG3710	71	6e-14

DNA-DEPENDENT RNA POLYMERASE SUBUNITS

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
DNA-directed RNA polymerase alpha subunit/40 kD subunit	K	BX548020	SYNW2090	COG0202	240	1e-64
DNA-directed RNA polymerase beta subunit/140 kD subunit	K	BX548020	SYNW0613	COG0085	1275	0.0
DNA-directed RNA polymerase beta' subunit/160 kD subunit	K	BX548020	SYNW0614	COG0086	584	1.0e-168
DNA-directed RNA polymerase beta' subunit/160 kD subunit	K	BX548020	SYNW0615	COG0086	203	1e-52
DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)	K	BX548020	SYNW0102	COG0568	272	3e-74
DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)	K	BX548020	SYNW1164	COG0568	49	3e-07
DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)	K	BX548020	SYNW1232	COG0568	43	2e-05
DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)	K	BX548020	SYNW1509	COG0568	224	9e-60
DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)	K	BX548020	SYNW1621	COG0568	261	4e-71
DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)	K	BX548020	SYNW1783	COG0568	312	4e-86
DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)	K	BX548020	SYNW2427	COG0568	282	2e-77
DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)	K	BX548020	SYNW2496	COG0568	256	2e-69
DNA-directed RNA polymerase specialized sigma subunit	K	BX548020	SYNW0102	COG1191	123	2e-29
DNA-directed RNA polymerase specialized sigma subunit	K	BX548020	SYNW1159	COG1191	35	0.003
DNA-directed RNA polymerase specialized sigma subunit	K	BX548020	SYNW1164	COG1191	61	6e-11
DNA-directed RNA polymerase specialized sigma subunit	K	BX548020	SYNW1232	COG1191	93	2e-20
DNA-directed RNA polymerase specialized sigma subunit	K	BX548020	SYNW1509	COG1191	107	8e-25
DNA-directed RNA polymerase specialized sigma subunit	K	BX548020	SYNW1621	COG1191	111	7e-26
DNA-directed RNA polymerase specialized sigma subunit	K	BX548020	SYNW1783	COG1191	130	2e-31
DNA-directed RNA polymerase specialized sigma subunit	K	BX548020	SYNW2427	COG1191	120	3e-28
DNA-directed RNA polymerase specialized sigma subunit	K	BX548020	SYNW2496	COG1191	116	2e-27
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog	K	BX548020	SYNW1159	COG1595	35	0.002
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog	K	BX548020	SYNW1232	COG1595	43	2e-05
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog	K	BX548020	SYNW1509	COG1595	37	0.001
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog	K	BX548020	SYNW1783	COG1595	37	0.003
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog	K	BX548020	SYNW2268	COG1595	37	4e-04
DNA-directed RNA polymerase subunit E'	K	BX548020	SYNW1202	COG1095	58	3e-09
DNA-directed RNA polymerase subunit E'	K	BX548020	SYNW1740	COG1095	41	2e-04
DNA-directed RNA polymerase subunit E'	K	BX548020	SYNW1897	COG1095	43	1e-04
DNA-directed RNA polymerase subunit E'	K	BX548020	SYNW1985	COG1095	42	7e-05

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
DNA helicase TIP49 TBP-interacting protein	K	BX548020	SYNW0061	COG1224	37	0.005
DNA helicase TIP49 TBP-interacting protein	K	BX548020	SYNW0135	COG1224	43	2e-05
DNA helicase TIP49 TBP-interacting protein	K	BX548020	SYNW0305	COG1224	51	2e-07
DNA helicase TIP49 TBP-interacting protein	K	BX548020	SYNW0327	COG1224	36	0.004
DNA helicase TIP49 TBP-interacting protein	K	BX548020	SYNW1211	COG1224	51	3e-07
DNA helicase TIP49 TBP-interacting protein	K	BX548020	SYNW1300	COG1224	51	2e-07
DNA helicase TIP49 TBP-interacting protein	K	BX548020	SYNW1587	COG1224	48	2e-06
DNA helicase TIP49 TBP-interacting protein	K	BX548020	SYNW1892	COG1224	36	0.005
DNA helicase TIP49 TBP-interacting protein	K	BX548020	SYNW2158	COG1224	36	0.009
DNA methylase	K	BX548020	SYNW0165	COG4646	37	0.005
DNA or RNA helicase of superfamily II	K	BX548020	SYNW0077	COG1061	56	7e-09
DNA or RNA helicase of superfamily II	K	BX548020	SYNW0636	COG1061	74	5e-14
DNA or RNA helicase of superfamily II	K	BX548020	SYNW0689	COG1061	137	2e-33
DNA or RNA helicase of superfamily II	K	BX548020	SYNW0920	COG1061	64	2e-11
DNA or RNA helicase of superfamily II	K	BX548020	SYNW1093	COG1061	60	6e-10
DNA or RNA helicase of superfamily II	K	BX548020	SYNW1177	COG1061	57	1e-08
DNA or RNA helicase of superfamily II	K	BX548020	SYNW1268	COG1061	35	0.005
DNA or RNA helicase of superfamily II	K	BX548020	SYNW1322	COG1061	58	3e-09
DNA or RNA helicase of superfamily II	K	BX548020	SYNW1782	COG1061	52	2e-07
DNA or RNA helicase of superfamily II	K	BX548020	SYNW1958	COG1061	46	7e-06
DNA or RNA helicase of superfamily II	K	BX548020	SYNW2179	COG1061	38	0.003
DNA or RNA helicase of superfamily II	K	BX548020	SYNW2362	COG1061	63	9e-11
dsRNA-specific ribonuclease	K	BX548020	SYNW0152	COG0571	163	1e-41
Exoribonuclease II	K	BX548020	SYNW1202	COG4776	38	0.002
Exoribonuclease II	K	BX548020	SYNW1224	COG4776	142	8e-35
Exoribonuclease R	K	BX548020	SYNW1202	COG0557	278	2e-75
Exoribonuclease R	K	BX548020	SYNW1224	COG0557	245	8e-66
Exoribonuclease R	K	BX548020	SYNW1897	COG0557	45	2e-05
Glucitol operon activator	K	BX548020	SYNW2169	COG4578	35	0.007
Guanosine polyphosphate pyrophosphohydrolase/synthetase	K	BX548020	SYNW2324	COG0317	807	0.0
Histone acetyltransferase	K	BX548020	SYNW1646	COG1243	48	1e-06
Histone acetyltransferase	K	BX548020	SYNW2150	COG1243	47	3e-06
Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase	K	BX548020	SYNW1414	COG0378	210	8e-56
Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase	K	BX548020	SYNW1795	COG0378	40	3e-04
Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase	K	BX548020	SYNW2443	COG0378	230	4e-62
Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase	K	BX548020	SYNW2482	COG0378	48	1e-06
Phage shock protein A (IM30) suppresses sigma54-dependent transcription	K	BX548020	SYNW1879	COG1842	134	8e-33
Predicted nucleic-acid-binding protein implicated in transcription termination	K	BX548020	SYNW0599	COG2740	54	2e-09
Predicted RNA-binding protein homologous to eukaryotic snRNP	K	BX548020	SYNW1838	COG1293	206	4e-54
Predicted RNA-binding protein homologous to eukaryotic snRNP	K	BX548020	SYNW1961	COG1293	42	8e-05
Predicted RNA-binding protein homologous to eukaryotic snRNP	K	BX548020	SYNW2242	COG1293	36	0.003
Predicted transcriptional regulator BolA superfamily protein	K	BX548020	SYNW0907	COG5007	59	7e-11
Predicted transcriptional regulator protein	K	BX548020	SYNW0798	COG4189	37	3e-04
Predicted transcriptional regulator protein containing CBS domains	K	BX548020	SYNW0101	COG4109	59	8e-10
Predicted transcriptional regulator protein containing CBS domains	K	BX548020	SYNW0187	COG4109	38	0.001
Predicted transcriptional regulator protein containing CBS domains	K	BX548020	SYNW0239	COG4109	47	3e-06
Predicted transcriptional regulator protein containing CBS domains	K	BX548020	SYNW1819	COG4109	55	1e-08
Rad3-related DNA helicase	K	BX548020	SYNW0077	COG1199	39	0.001
Rad3-related DNA helicase	K	BX548020	SYNW0636	COG1199	49	2e-06
Rad3-related DNA helicase	K	BX548020	SYNW0689	COG1199	39	7e-04
Rad3-related DNA helicase	K	BX548020	SYNW0920	COG1199	39	8e-04
Rad3-related DNA helicase	K	BX548020	SYNW1958	COG1199	40	5e-04
Rad3-related DNA helicase	K	BX548020	SYNW2059	COG1199	69	8e-13
RecG-like helicase	K	BX548020	SYNW0077	COG1200	48	3e-06
RecG-like helicase	K	BX548020	SYNW0636	COG1200	40	7e-04
RecG-like helicase	K	BX548020	SYNW0920	COG1200	63	8e-11
RecG-like helicase	K	BX548020	SYNW1093	COG1200	747	0.0
RecG-like helicase	K	BX548020	SYNW1177	COG1200	365	1.0e-101
RecG-like helicase	K	BX548020	SYNW1782	COG1200	40	5e-04
RecG-like helicase	K	BX548020	SYNW1958	COG1200	38	0.002
Regulators of stationary/sporulation gene expression	K	BX548020	SYNW0464	COG2002	37	4e-04
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain	K	BX548020	SYNW0126	COG4567	65	7e-12
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain	K	BX548020	SYNW0808	COG4567	57	9e-10
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain	K	BX548020	SYNW0904	COG4567	34	0.009
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain	K	BX548020	SYNW0947	COG4567	63	2e-11
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain	K	BX548020	SYNW1875	COG4567	52	2e-08
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain	K	BX548020	SYNW2236	COG4567	61	1e-10
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain	K	BX548020	SYNW2246	COG4567	67	9e-13
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain	K	BX548020	SYNW2289	COG4567	66	2e-12
Response regulator containing a CheY-like receiver domain and an HD-GYP domain	K	BX548020	SYNW0126	COG3437	108	4e-25
Response regulator containing a CheY-like receiver domain and an HD-GYP domain	K	BX548020	SYNW0808	COG3437	88	4e-19
Response regulator containing a CheY-like receiver domain and an HD-GYP domain	K	BX548020	SYNW0904	COG3437	61	6e-11
Response regulator containing a CheY-like receiver domain and an HD-GYP domain	K	BX548020	SYNW0947	COG3437	100	7e-23
Response regulator containing a CheY-like receiver domain and an HD-GYP domain	K	BX548020	SYNW1875	COG3437	72	3e-14
Response regulator containing a CheY-like receiver domain and an HD-GYP domain	K	BX548020	SYNW2236	COG3437	101	4e-23
Response regulator containing a CheY-like receiver domain and an HD-GYP domain	K	BX548020	SYNW2246	COG3437	113	2e-26
Response regulator containing a CheY-like receiver domain and an HD-GYP domain	K	BX548020	SYNW2289	COG3437	105	3e-24
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	K	BX548020	SYNW0126	COG2197	80	2e-16
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	K	BX548020	SYNW0566	COG2197	108	3e-25
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	K	BX548020	SYNW0808	COG2197	72	4e-14
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	K	BX548020	SYNW0904	COG2197	60	2e-10
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	K	BX548020	SYNW0947	COG2197	78	4e-16
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	K	BX548020	SYNW1380	COG2197	91	8e-20
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	K	BX548020	SYNW1385	COG2197	122	2e-29
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	K	BX548020	SYNW1875	COG2197	70	1e-13
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	K	BX548020	SYNW1973	COG2197	58	2e-10
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	K	BX548020	SYNW2236	COG2197	74	8e-15
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	K	BX548020	SYNW2246	COG2197	87	1e-18
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	K	BX548020	SYNW2268	COG2197	81	2e-17
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	K	BX548020	SYNW2289	COG2197	153	1e-38
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	K	BX548020	SYNW2317	COG2197	35	0.008
Response regulator of citrate/malate metabolism	K	BX548020	SYNW0126	COG4565	68	9e-13
Response regulator of citrate/malate metabolism	K	BX548020	SYNW0808	COG4565	64	7e-12
Response regulator of citrate/malate metabolism	K	BX548020	SYNW0904	COG4565	44	7e-06
Response regulator of citrate/malate metabolism	K	BX548020	SYNW0947	COG4565	61	8e-11
Response regulator of citrate/malate metabolism	K	BX548020	SYNW1875	COG4565	62	4e-11
Response regulator of citrate/malate metabolism	K	BX548020	SYNW2236	COG4565	62	4e-11
Response regulator of citrate/malate metabolism	K	BX548020	SYNW2246	COG4565	70	2e-13
Response regulator of citrate/malate metabolism	K	BX548020	SYNW2289	COG4565	57	1e-09
Response regulator of the LytR/AlgR family	K	BX548020	SYNW0126	COG3279	63	1e-11
Response regulator of the LytR/AlgR family	K	BX548020	SYNW0808	COG3279	50	2e-07
Response regulator of the LytR/AlgR family	K	BX548020	SYNW0904	COG3279	39	4e-04
Response regulator of the LytR/AlgR family	K	BX548020	SYNW0947	COG3279	47	1e-06
Response regulator of the LytR/AlgR family	K	BX548020	SYNW1875	COG3279	48	5e-07
Response regulator of the LytR/AlgR family	K	BX548020	SYNW2236	COG3279	46	2e-06
Response regulator of the LytR/AlgR family	K	BX548020	SYNW2246	COG3279	62	5e-11
Response regulator of the LytR/AlgR family	K	BX548020	SYNW2289	COG3279	58	5e-10
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	K	BX548020	SYNW0126	COG0745	222	2e-59
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	K	BX548020	SYNW0808	COG0745	204	5e-54
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	K	BX548020	SYNW0904	COG0745	147	1e-36
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	K	BX548020	SYNW0947	COG0745	248	3e-67
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	K	BX548020	SYNW1598	COG0745	123	9e-30
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	K	BX548020	SYNW1875	COG0745	190	8e-50
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	K	BX548020	SYNW2236	COG0745	225	2e-60
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	K	BX548020	SYNW2246	COG0745	232	3e-62
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	K	BX548020	SYNW2289	COG0745	130	1e-31
Serine phosphatase RsbU regulator of sigma subunit	K	BX548020	SYNW0012	COG2208	211	7e-56
Serine/threonine protein kinase	K	BX548020	SYNW2524	COG0515	37	0.004
SOS-response transcriptional repressors (RecA-mediated autopeptidase)	K	BX548020	SYNW1044	COG1974	117	3e-28
SOS-response transcriptional repressors (RecA-mediated autopeptidase)	K	BX548020	SYNW1582	COG1974	177	7e-46
Superfamily II DNA and RNA helicase	K	BX548020	SYNW0077	COG0513	66	1e-11
Superfamily II DNA and RNA helicase	K	BX548020	SYNW0636	COG0513	57	4e-09
Superfamily II DNA and RNA helicase	K	BX548020	SYNW0689	COG0513	41	2e-04
Superfamily II DNA and RNA helicase	K	BX548020	SYNW0920	COG0513	418	1.0e-118
Superfamily II DNA and RNA helicase	K	BX548020	SYNW1093	COG0513	64	5e-11
Superfamily II DNA and RNA helicase	K	BX548020	SYNW1177	COG0513	67	7e-12
Superfamily II DNA and RNA helicase	K	BX548020	SYNW1322	COG0513	108	2e-24
Superfamily II DNA and RNA helicase	K	BX548020	SYNW1782	COG0513	41	4e-04
Superfamily II DNA and RNA helicase	K	BX548020	SYNW1958	COG0513	102	6e-23
Superfamily II DNA and RNA helicase	K	BX548020	SYNW2179	COG0513	76	9e-15
Superfamily II DNA and RNA helicase	K	BX548020	SYNW2362	COG0513	37	0.006
Superfamily II DNA/RNA helicase SNF2 family	K	BX548020	SYNW0039	COG0553	114	1e-26
Superfamily II DNA/RNA helicase SNF2 family	K	BX548020	SYNW2362	COG0553	328	1e-90
Transcriptional accessory protein	K	BX548020	SYNW1202	COG2183	46	1e-05
Transcriptional accessory protein	K	BX548020	SYNW1740	COG2183	51	1e-07
Transcriptional accessory protein	K	BX548020	SYNW1897	COG2183	65	2e-11
Transcriptional accessory protein	K	BX548020	SYNW1985	COG2183	68	8e-13
Transcriptional activator of acetoin/glycerol metabolism	K	BX548020	SYNW0063	COG3284	39	7e-04
Transcriptional activator of acetoin/glycerol metabolism	K	BX548020	SYNW0327	COG3284	38	0.001
Transcriptional activator of acetoin/glycerol metabolism	K	BX548020	SYNW2158	COG3284	46	7e-06
Transcriptional activator of acetoin/glycerol metabolism	K	BX548020	SYNW2346	COG3284	36	0.008
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain	K	BX548020	SYNW1592	COG4977	52	4e-08

TRANSCRIPTIONAL REGULATORS

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
ATP-dependent transcriptional regulator protein	K	BX548020	SYNW0566	COG2909	48	8e-07
ATP-dependent transcriptional regulator protein	K	BX548020	SYNW1380	COG2909	49	3e-07
ATP-dependent transcriptional regulator protein	K	BX548020	SYNW1385	COG2909	47	1e-06
ATP-dependent transcriptional regulator protein	K	BX548020	SYNW1973	COG2909	41	1e-05
ATP-dependent transcriptional regulator protein	K	BX548020	SYNW2268	COG2909	58	1e-10
ATP-dependent transcriptional regulator protein	K	BX548020	SYNW2289	COG2909	46	3e-06
Predicted transcriptional regulator protein	K	BX548020	SYNW0091	COG1725	105	4e-24
Predicted transcriptional regulator protein	K	BX548020	SYNW0101	COG2524	47	3e-06
Predicted transcriptional regulator protein	K	BX548020	SYNW0187	COG2524	38	0.001
Predicted transcriptional regulator protein	K	BX548020	SYNW0239	COG2524	44	2e-05
Predicted transcriptional regulator protein	K	BX548020	SYNW0317	COG3355	39	4e-04
Predicted transcriptional regulator protein	K	BX548020	SYNW0317	COG2345	153	1e-38
Predicted transcriptional regulator protein	K	BX548020	SYNW0450	COG2524	44	1e-05
Predicted transcriptional regulator protein	K	BX548020	SYNW0770	COG3620	46	8e-07
Predicted transcriptional regulator protein	K	BX548020	SYNW0770	COG2524	64	6e-12
Predicted transcriptional regulator protein	K	BX548020	SYNW0798	COG0640	65	1e-12
Predicted transcriptional regulator protein	K	BX548020	SYNW0798	COG1777	34	0.002
Predicted transcriptional regulator protein	K	BX548020	SYNW1044	COG2932	60	5e-11
Predicted transcriptional regulator protein	K	BX548020	SYNW1582	COG2932	51	9e-08
Predicted transcriptional regulator protein	K	BX548020	SYNW1627	COG2932	42	1e-05
Predicted transcriptional regulator protein	K	BX548020	SYNW1660	COG3311	51	1e-08
Predicted transcriptional regulator protein	K	BX548020	SYNW1665	COG3311	53	5e-09
Predicted transcriptional regulator protein	K	BX548020	SYNW2105	COG3311	57	2e-10
Predicted transcriptional regulator protein	K	BX548020	SYNW2370	COG1733	119	4e-29
Predicted transcriptional regulator protein consists of a Zn-ribbon and ATP-cone domains	K	BX548020	SYNW1984	COG1327	178	2e-46
Predicted transcriptional regulator protein containing the HTH domain	K	BX548020	SYNW1294	COG1386	91	3e-20
Putative transcriptional regulator protein	K	BX548020	SYNW2163	COG1521	70	2e-13
Transcriptional regulator	K	BX548020	SYNW0926	COG1316	130	1e-31
Transcriptional regulator	K	BX548020	SYNW0964	COG1316	95	6e-21
Transcriptional regulator	K	BX548020	SYNW2260	COG0583	152	3e-38
Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains	K	BX548020	SYNW0327	COG3604	38	0.002
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains	K	BX548020	SYNW0327	COG3829	49	1e-06
Transcriptional regulator of a riboflavin/FAD biosynthetic operon	K	BX548020	SYNW1193	COG1339	38	4e-04
Transcriptional regulator of heat shock gene	K	BX548020	SYNW2279	COG1420	220	2e-58
Transcriptional regulators	K	BX548020	SYNW0091	COG1802	42	9e-05
Transcriptional regulators	K	BX548020	SYNW0091	COG2188	61	1e-10
Transcriptional regulators	K	BX548020	SYNW0091	COG2186	55	9e-09
Transcriptional regulators	K	BX548020	SYNW0145	COG1737	46	8e-06
Transcriptional regulators	K	BX548020	SYNW0187	COG1737	83	3e-17
Transcriptional regulators	K	BX548020	SYNW0317	COG1846	36	0.002
Transcriptional regulators	K	BX548020	SYNW1083	COG1609	43	4e-05
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs	K	BX548020	SYNW0091	COG1167	59	4e-10
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs	K	BX548020	SYNW0220	COG1167	38	0.001
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs	K	BX548020	SYNW1171	COG1167	156	3e-39
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs	K	BX548020	SYNW1253	COG1167	45	1e-05
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs	K	BX548020	SYNW1877	COG1167	123	2e-29
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs	K	BX548020	SYNW2147	COG1167	105	5e-24
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs	K	BX548020	SYNW2291	COG1167	36	0.006
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs	K	BX548020	SYNW2318	COG1167	81	1e-16
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs	K	BX548020	SYNW2334	COG1167	39	4e-04
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs	K	BX548020	SYNW2376	COG1167	43	4e-05
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain	K	BX548020	SYNW0327	COG1221	57	4e-09
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain	K	BX548020	SYNW1707	COG1221	35	0.006
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain	K	BX548020	SYNW2158	COG1221	46	1e-05
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain	K	BX548020	SYNW2346	COG1221	40	0.001
Transcriptional regulators of sugar metabolism	K	BX548020	SYNW0317	COG1349	37	0.002
Transcriptional regulators of sugar metabolism	K	BX548020	SYNW0609	COG1349	46	2e-06
Transcriptional regulator/sugar kinase	K	BX548020	SYNW1480	COG1940	52	6e-08
Transcriptional regulator/sugar kinase	K	BX548020	SYNW1487	COG1940	193	2e-50

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Transcriptional repressor	K	BX548020	SYNW2303	COG5175	45	7e-05
Transcription-repair coupling factor (superfamily II helicase)	K	BX548020	SYNW0077	COG1197	130	3e-31
Transcription-repair coupling factor (superfamily II helicase)	K	BX548020	SYNW0920	COG1197	46	8e-06
Transcription-repair coupling factor (superfamily II helicase)	K	BX548020	SYNW1093	COG1197	329	6e-91
Transcription-repair coupling factor (superfamily II helicase)	K	BX548020	SYNW1177	COG1197	1151	0.0
Transcription-repair coupling factor (superfamily II helicase)	K	BX548020	SYNW1782	COG1197	40	5e-04

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