Translation, Ribosomal Structure and Biogenesis

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
16S RNA G1207 methylase RsmC	J	BX548020	SYNW0487	COG2813	42	9e-05
16S RNA G1207 methylase RsmC	J	BX548020	SYNW0534	COG2813	41	1e-04
16S RNA G1207 methylase RsmC	J	BX548020	SYNW0545	COG2813	40	2e-04
16S RNA G1207 methylase RsmC	J	BX548020	SYNW0991	COG2813	40	2e-04
16S RNA G1207 methylase RsmC	J	BX548020	SYNW1148	COG2813	44	1e-05
16S RNA G1207 methylase RsmC	J	BX548020	SYNW1228	COG2813	38	0.002
16S RNA G1207 methylase RsmC	J	BX548020	SYNW1976	COG2813	60	2e-10
16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase	J	BX548020	SYNW0685	COG1187	158	4e-40
16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase	J	BX548020	SYNW0737	COG1187	39	2e-04
16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase	J	BX548020	SYNW0824	COG1187	32	0.009
16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase	J	BX548020	SYNW0949	COG1187	223	6e-60
16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase	J	BX548020	SYNW2326	COG1187	66	4e-12
23S rRNA methylase	J	BX548020	SYNW0684	COG0293	39	3e-04
23S rRNA methylase	J	BX548020	SYNW2410	COG0293	38	5e-04
2-methylthioadenine synthetase	J	BX548020	SYNW1640	COG0621	485	1.0e-138
2-methylthioadenine synthetase	J	BX548020	SYNW1646	COG0621	49	5e-07
2-methylthioadenine synthetase	J	BX548020	SYNW2130	COG0621	46	3e-06
2-methylthioadenine synthetase	J	BX548020	SYNW2150	COG0621	66	8e-12
2-methylthioadenine synthetase	J	BX548020	SYNW2194	COG0621	451	1.0e-128
2-methylthioadenine synthetase	J	BX548020	SYNW2196	COG0621	38	0.002
2-methylthioadenine synthetase	J	BX548020	SYNW2502	COG0621	47	4e-06
Acetyltransferase including N-acetylase of ribosomal protein	J	BX548020	SYNW0937	COG1670	34	0.004

AMINOACYL-TRNA SYNTHETASES AND ALTERNATIVE SYSTEMS FOR AMINO ACID ACTIVATION

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Alanyl-tRNA synthetase	J	BX548020	SYNW1478	COG0013	43	7e-05
Alanyl-tRNA synthetase	J	BX548020	SYNW2360	COG0013	1034	0.0
Arginyl-tRNA synthetase	J	BX548020	SYNW1255	COG0018	44	3e-05
Arginyl-tRNA synthetase	J	BX548020	SYNW2319	COG0018	551	1.0e-158
Arginyl-tRNA synthetase	J	BX548020	SYNW2396	COG0018	39	0.002
Aspartyl/asparaginyl-tRNA synthetase	J	BX548020	SYNW0127	COG0017	173	2e-44
Aspartyl/asparaginyl-tRNA synthetase	J	BX548020	SYNW2426	COG0017	194	1e-50
Aspartyl-tRNA synthetase	J	BX548020	SYNW0127	COG0173	115	8e-27
Aspartyl-tRNA synthetase	J	BX548020	SYNW2426	COG0173	836	0.0
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase	J	BX548020	SYNW1031	COG0154	524	1.0e-150
Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog)	J	BX548020	SYNW2356	COG0064	686	0.0
Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit	J	BX548020	SYNW0292	COG0721	91	2e-20
Cysteinyl-tRNA synthetase	J	BX548020	SYNW0289	COG0215	44	7e-05
Cysteinyl-tRNA synthetase	J	BX548020	SYNW0701	COG0215	578	1.0e-166
Cysteinyl-tRNA synthetase	J	BX548020	SYNW1222	COG0215	44	2e-05
Cysteinyl-tRNA synthetase	J	BX548020	SYNW1255	COG0215	50	6e-07
Cysteinyl-tRNA synthetase	J	BX548020	SYNW2319	COG0215	36	0.006
Cysteinyl-tRNA synthetase	J	BX548020	SYNW2396	COG0215	44	6e-05
Glutamyl- and glutaminyl-tRNA synthetase	J	BX548020	SYNW0588	COG0008	224	5e-60
Glutamyl- and glutaminyl-tRNA synthetase	J	BX548020	SYNW1826	COG0008	431	1.0e-122
Glycyl-tRNA synthetase alpha subunit	J	BX548020	SYNW1671	COG0752	494	1.0e-141
Glycyl-tRNA synthetase beta subunit	J	BX548020	SYNW1096	COG0751	627	0.0
Glycyl-tRNA synthetase beta subunit	J	BX548020	SYNW2319	COG0751	39	7e-04
Glycyl-tRNA synthetase (class II)	J	BX548020	SYNW1478	COG0423	38	0.003
Glycyl-tRNA synthetase (class II)	J	BX548020	SYNW1771	COG0423	45	2e-05
Histidyl-tRNA synthetase	J	BX548020	SYNW0197	COG0124	465	1.0e-132
Histidyl-tRNA synthetase	J	BX548020	SYNW1276	COG0124	153	3e-38
Histidyl-tRNA synthetase	J	BX548020	SYNW1478	COG0124	50	5e-07
Histidyl-tRNA synthetase	J	BX548020	SYNW1771	COG0124	39	0.001
Histidyl-tRNA synthetase	J	BX548020	SYNW2426	COG0124	44	3e-05
Isoleucyl-tRNA synthetase	J	BX548020	SYNW0289	COG0060	1103	0.0
Isoleucyl-tRNA synthetase	J	BX548020	SYNW0701	COG0060	38	0.001
Isoleucyl-tRNA synthetase	J	BX548020	SYNW1222	COG0060	76	8e-15
Isoleucyl-tRNA synthetase	J	BX548020	SYNW1255	COG0060	231	2e-61
Isoleucyl-tRNA synthetase	J	BX548020	SYNW2396	COG0060	425	1.0e-119
Leucyl-tRNA synthetase	J	BX548020	SYNW0289	COG0495	200	4e-52
Leucyl-tRNA synthetase	J	BX548020	SYNW0701	COG0495	41	2e-04
Leucyl-tRNA synthetase	J	BX548020	SYNW1222	COG0495	60	6e-10
Leucyl-tRNA synthetase	J	BX548020	SYNW1255	COG0495	1020	0.0
Leucyl-tRNA synthetase	J	BX548020	SYNW2319	COG0495	38	0.002
Leucyl-tRNA synthetase	J	BX548020	SYNW2396	COG0495	226	6e-60
Lysyl-tRNA synthetase (class II)	J	BX548020	SYNW0127	COG1190	678	0.0
Lysyl-tRNA synthetase (class II)	J	BX548020	SYNW2426	COG1190	145	8e-36
Phenylalanyl-tRNA synthetase alpha subunit	J	BX548020	SYNW1600	COG0016	428	1.0e-121
Phenylalanyl-tRNA synthetase alpha subunit	J	BX548020	SYNW1600	COG2024	58	1e-09
Phenylalanyl-tRNA synthetase beta subunit	J	BX548020	SYNW1227	COG0072	473	1.0e-134
Prolyl-tRNA synthetase	J	BX548020	SYNW0197	COG0442	48	2e-06
Prolyl-tRNA synthetase	J	BX548020	SYNW1478	COG0442	86	9e-18
Prolyl-tRNA synthetase	J	BX548020	SYNW1771	COG0442	510	1.0e-145
Prolyl-tRNA synthetase	J	BX548020	SYNW1894	COG0442	58	2e-09
Seryl-tRNA synthetase	J	BX548020	SYNW0274	COG0172	37	0.003
Seryl-tRNA synthetase	J	BX548020	SYNW1478	COG0172	59	8e-10
Seryl-tRNA synthetase	J	BX548020	SYNW1894	COG0172	502	1.0e-143
Threonyl-tRNA synthetase	J	BX548020	SYNW0197	COG0441	37	0.002
Threonyl-tRNA synthetase	J	BX548020	SYNW1478	COG0441	699	0.0
Threonyl-tRNA synthetase	J	BX548020	SYNW1771	COG0441	63	4e-11
Threonyl-tRNA synthetase	J	BX548020	SYNW1894	COG0441	68	1e-12
Threonyl-tRNA synthetase	J	BX548020	SYNW2360	COG0441	38	0.002
Tryptophanyl-tRNA synthetase	J	BX548020	SYNW0568	COG0180	76	7e-15
Tryptophanyl-tRNA synthetase	J	BX548020	SYNW1475	COG0180	381	1.0e-107
Tyrosyl-tRNA synthetase	J	BX548020	SYNW0568	COG0162	332	2e-92
Tyrosyl-tRNA synthetase	J	BX548020	SYNW1475	COG0162	56	3e-09
Valyl-tRNA synthetase	J	BX548020	SYNW0289	COG0525	433	1.0e-122
Valyl-tRNA synthetase	J	BX548020	SYNW1222	COG0525	80	3e-16
Valyl-tRNA synthetase	J	BX548020	SYNW1255	COG0525	334	1e-92
Valyl-tRNA synthetase	J	BX548020	SYNW2396	COG0525	1150	0.0

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Cytosine/adenosine deaminase	J	BX548020	SYNW1076	COG0590	138	2e-34
Cytosine/adenosine deaminase	J	BX548020	SYNW1590	COG0590	73	4e-14
Dimethyladenosine transferase (rRNA methylation)	J	BX548020	SYNW0722	COG0030	35	0.003
Dimethyladenosine transferase (rRNA methylation)	J	BX548020	SYNW1052	COG0030	234	5e-63
Diphthamide biosynthesis methyltransferase	J	BX548020	SYNW1844	COG1798	37	0.001
Diphthamide biosynthesis methyltransferase	J	BX548020	SYNW1899	COG1798	37	0.002
Diphthamide biosynthesis methyltransferase	J	BX548020	SYNW2475	COG1798	39	5e-04
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)	J	BX548020	SYNW0336	COG0189	50	2e-07
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)	J	BX548020	SYNW0830	COG0189	43	9e-05
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)	J	BX548020	SYNW1384	COG0189	214	8e-57
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)	J	BX548020	SYNW2309	COG0189	191	7e-50
Glu-tRNAGln amidotransferase subunit E (contains GAD domain)	J	BX548020	SYNW2356	COG2511	96	4e-21
Glu-tRNAGln amidotransferase subunit E (contains GAD domain)	J	BX548020	SYNW2426	COG2511	41	3e-04
GTP-binding protein required for 40S ribosome biogenesis	J	BX548020	SYNW0825	COG5192	37	0.003
GTP-binding protein required for 40S ribosome biogenesis	J	BX548020	SYNW1272	COG5192	35	0.008
GTP-binding protein required for 40S ribosome biogenesis	J	BX548020	SYNW2322	COG5192	37	0.002
Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA	J	BX548020	SYNW1937	COG4445	170	7e-44
L-asparaginase/ Glu-tRNAGln amidotransferase subunit D	J	BX548020	SYNW2317	COG0252	242	3e-65
Methionyl-tRNA synthetase	J	BX548020	SYNW0289	COG0143	81	5e-16
Methionyl-tRNA synthetase	J	BX548020	SYNW0701	COG0143	58	2e-09
Methionyl-tRNA synthetase	J	BX548020	SYNW1222	COG0143	536	1.0e-153
Methionyl-tRNA synthetase	J	BX548020	SYNW1255	COG0143	119	9e-28
Methionyl-tRNA synthetase	J	BX548020	SYNW2319	COG0143	37	0.005
Methionyl-tRNA synthetase	J	BX548020	SYNW2396	COG0143	92	1e-19
Methylase of polypeptide chain release factors	J	BX548020	SYNW0104	COG2890	40	7e-04
Methylase of polypeptide chain release factors	J	BX548020	SYNW0487	COG2890	49	5e-07
Methylase of polypeptide chain release factors	J	BX548020	SYNW0534	COG2890	42	4e-05
Methylase of polypeptide chain release factors	J	BX548020	SYNW0545	COG2890	41	1e-04
Methylase of polypeptide chain release factors	J	BX548020	SYNW0626	COG2890	37	0.002
Methylase of polypeptide chain release factors	J	BX548020	SYNW0684	COG2890	36	0.003
Methylase of polypeptide chain release factors	J	BX548020	SYNW0722	COG2890	53	1e-08
Methylase of polypeptide chain release factors	J	BX548020	SYNW0991	COG2890	50	1e-07
Methylase of polypeptide chain release factors	J	BX548020	SYNW1148	COG2890	59	2e-10
Methylase of polypeptide chain release factors	J	BX548020	SYNW1228	COG2890	51	2e-07
Methylase of polypeptide chain release factors	J	BX548020	SYNW1273	COG2890	43	1e-04
Methylase of polypeptide chain release factors	J	BX548020	SYNW1596	COG2890	38	0.002
Methylase of polypeptide chain release factors	J	BX548020	SYNW1674	COG2890	42	3e-05
Methylase of polypeptide chain release factors	J	BX548020	SYNW1749	COG2890	44	1e-05
Methylase of polypeptide chain release factors	J	BX548020	SYNW1914	COG2890	42	5e-05
Methylase of polypeptide chain release factors	J	BX548020	SYNW1976	COG2890	179	3e-46
Methylase of polypeptide chain release factors	J	BX548020	SYNW2287	COG2890	41	7e-05
N2 N2-dimethylguanosine tRNA methyltransferase	J	BX548020	SYNW0682	COG1867	149	3e-37
NAD(FAD)-utilizing enzyme possibly involved in translation	J	BX548020	SYNW0899	COG1206	648	0.0
NAD(FAD)-utilizing enzyme possibly involved in translation	J	BX548020	SYNW0992	COG1206	38	0.001
NAD(FAD)-utilizing enzyme possibly involved in translation	J	BX548020	SYNW1427	COG1206	37	0.002
NAD(FAD)-utilizing enzyme possibly involved in translation	J	BX548020	SYNW2057	COG1206	40	5e-04
NAD(FAD)-utilizing enzyme possibly involved in translation	J	BX548020	SYNW2213	COG1206	38	0.002
NAD(FAD)-utilizing enzyme possibly involved in translation	J	BX548020	SYNW2382	COG1206	78	2e-15
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)	J	BX548020	SYNW0090	COG1208	39	4e-04
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)	J	BX548020	SYNW0148	COG1208	42	1e-04
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)	J	BX548020	SYNW0425	COG1208	34	0.009
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)	J	BX548020	SYNW0447	COG1208	50	1e-07
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)	J	BX548020	SYNW0450	COG1208	192	3e-50
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)	J	BX548020	SYNW0558	COG1208	46	2e-06
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)	J	BX548020	SYNW0649	COG1208	127	9e-31
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)	J	BX548020	SYNW0783	COG1208	50	4e-07
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)	J	BX548020	SYNW0897	COG1208	41	3e-05
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)	J	BX548020	SYNW1003	COG1208	142	5e-35
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)	J	BX548020	SYNW1118	COG1208	141	8e-35
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)	J	BX548020	SYNW1849	COG1208	36	0.002
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)	J	BX548020	SYNW2266	COG1208	286	2e-78
Peptide chain release factor RF-3	J	BX548020	SYNW0597	COG4108	59	1e-09
Peptide chain release factor RF-3	J	BX548020	SYNW1109	COG4108	108	1e-24
Peptide chain release factor RF-3	J	BX548020	SYNW1149	COG4108	752	0.0
Peptide chain release factor RF-3	J	BX548020	SYNW1684	COG4108	123	4e-29
Peptide chain release factor RF-3	J	BX548020	SYNW2137	COG4108	244	2e-65
Peptide chain release factor RF-3	J	BX548020	SYNW2138	COG4108	56	6e-09
Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)	J	BX548020	SYNW0276	COG1185	36	0.003
Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)	J	BX548020	SYNW1202	COG1185	45	2e-05
Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)	J	BX548020	SYNW1740	COG1185	51	1e-07
Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)	J	BX548020	SYNW1897	COG1185	877	0.0
Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)	J	BX548020	SYNW1985	COG1185	76	6e-15
Predicted exonuclease of the beta-lactamase fold involved in RNA processing	J	BX548020	SYNW0068	COG1236	50	5e-07
Predicted exonuclease of the beta-lactamase fold involved in RNA processing	J	BX548020	SYNW1317	COG1236	119	3e-28
Predicted GTPase probable translation factor	J	BX548020	SYNW0657	COG0012	37	0.003
Predicted GTPase probable translation factor	J	BX548020	SYNW0704	COG0012	455	1.0e-129
Predicted GTPase probable translation factor	J	BX548020	SYNW1340	COG0012	36	0.003
Predicted GTPase probable translation factor	J	BX548020	SYNW1928	COG0012	106	2e-24
Predicted GTPase probable translation factor	J	BX548020	SYNW2166	COG0012	38	0.002
Predicted RNA methylase	J	BX548020	SYNW0285	COG2263	34	0.010
Predicted RNA methylase	J	BX548020	SYNW0534	COG2263	48	1e-06
Predicted RNA methylase	J	BX548020	SYNW0684	COG2263	36	0.002
Predicted RNA methylase	J	BX548020	SYNW0722	COG2263	41	7e-05
Predicted RNA methylase	J	BX548020	SYNW0991	COG2263	39	2e-04
Predicted RNA methylase	J	BX548020	SYNW1148	COG2263	38	7e-04
Predicted RNA methylase	J	BX548020	SYNW1228	COG2263	40	3e-04
Predicted RNA methylase	J	BX548020	SYNW1976	COG2263	41	1e-04
Predicted RNA methylase	J	BX548020	SYNW2287	COG2263	43	1e-05
Predicted rRNA methylase	J	BX548020	SYNW0482	COG1189	285	3e-78
Predicted rRNA methylase	J	BX548020	SYNW0824	COG1189	37	3e-04
Predicted rRNA methylase	J	BX548020	SYNW1148	COG5459	35	0.004
Predicted rRNA methylase	J	BX548020	SYNW2326	COG1189	36	0.004
Predicted rRNA methylase (SpoU class)	J	BX548020	SYNW0719	COG0219	71	9e-14
Predicted rRNA methylase (SpoU class)	J	BX548020	SYNW1029	COG0219	58	2e-09
Predicted rRNA methylase (SpoU class)	J	BX548020	SYNW1215	COG0219	176	1e-45
Predicted rRNA methylase (SpoU class)	J	BX548020	SYNW1631	COG0219	37	0.002
Predicted rRNA methylase (SpoU class)	J	BX548020	SYNW1681	COG0219	65	4e-12
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain	J	BX548020	SYNW0047	COG0482	48	2e-06
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain	J	BX548020	SYNW1622	COG0482	373	1.0e-104
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain	J	BX548020	SYNW2051	COG0482	39	3e-04
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain	J	BX548020	SYNW2431	COG0482	46	3e-06
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain	J	BX548020	SYNW2513	COG0482	39	9e-04
Pseudouridine synthase	J	BX548020	SYNW0544	COG0130	216	1e-57
Pseudouridylate synthase 23S RNA-specific	J	BX548020	SYNW0685	COG0564	40	1e-04
Pseudouridylate synthase 23S RNA-specific	J	BX548020	SYNW0737	COG0564	167	4e-43
Pseudouridylate synthase 23S RNA-specific	J	BX548020	SYNW0949	COG0564	70	2e-13
Pseudouridylate synthase 23S RNA-specific	J	BX548020	SYNW2288	COG0564	158	7e-40
Pseudouridylate synthase 23S RNA-specific	J	BX548020	SYNW2326	COG0564	291	6e-80
Pseudouridylate synthase	J	BX548020	SYNW2092	COG0101	259	2e-70
Putative translation factor (SUA5)	J	BX548020	SYNW1975	COG0009	124	4e-30
Putative translation initiation inhibitor yjgF family	J	BX548020	SYNW1545	COG0251	138	2e-34
Queuine/archaeosine tRNA-ribosyltransferase	J	BX548020	SYNW0244	COG0343	457	1.0e-130
Ribonuclease D	J	BX548020	SYNW0702	COG0349	53	1e-07
Ribonuclease D	J	BX548020	SYNW2036	COG0349	187	7e-49
Ribonuclease G and E	J	BX548020	SYNW2145	COG1530	357	1e-99
Ribosomal protein L11 methylase	J	BX548020	SYNW0487	COG2264	41	1e-04
Ribosomal protein L11 methylase	J	BX548020	SYNW0534	COG2264	200	1e-52
Ribosomal protein L11 methylase	J	BX548020	SYNW0684	COG2264	45	6e-06
Ribosomal protein L11 methylase	J	BX548020	SYNW0722	COG2264	45	6e-06
Ribosomal protein L11 methylase	J	BX548020	SYNW0991	COG2264	47	1e-06
Ribosomal protein L11 methylase	J	BX548020	SYNW1148	COG2264	39	3e-04
Ribosomal protein L11 methylase	J	BX548020	SYNW1228	COG2264	36	0.008
Ribosomal protein L11 methylase	J	BX548020	SYNW1674	COG2264	42	4e-05
Ribosomal protein L11 methylase	J	BX548020	SYNW1976	COG2264	41	1e-04
Ribosomal protein L11 methylase	J	BX548020	SYNW2141	COG2264	37	0.002

RIBOSOMAL PROTEINS - LARGE SUBUNIT

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Ribosomal protein L10	J	BX548020	SYNW2341	COG0244	132	1e-32
Ribosomal protein L11	J	BX548020	SYNW2343	COG0080	192	9e-51
Ribosomal protein L13	J	BX548020	SYNW2093	COG0102	198	1e-52
Ribosomal protein L14	J	BX548020	SYNW2077	COG0093	171	2e-44
Ribosomal protein L15	J	BX548020	SYNW2084	COG0200	121	3e-29
Ribosomal protein L16/L10E	J	BX548020	SYNW2074	COG0197	174	2e-45
Ribosomal protein L17	J	BX548020	SYNW2091	COG0203	139	4e-35
Ribosomal protein L18	J	BX548020	SYNW2082	COG0256	140	2e-35
Ribosomal protein L18E	J	BX548020	SYNW2084	COG1727	42	2e-05
Ribosomal protein L19	J	BX548020	SYNW1824	COG0335	148	1e-37
Ribosomal protein L1	J	BX548020	SYNW2342	COG0081	278	2e-76
Ribosomal protein L20	J	BX548020	SYNW0057	COG0292	133	4e-33
Ribosomal protein L21	J	BX548020	SYNW0547	COG0261	104	2e-24
Ribosomal protein L22	J	BX548020	SYNW2072	COG0091	124	1e-30
Ribosomal protein L23	J	BX548020	SYNW2069	COG0089	101	9e-24
Ribosomal protein L24	J	BX548020	SYNW2078	COG0198	90	6e-20
Ribosomal protein L27	J	BX548020	SYNW0546	COG0211	111	1e-26
Ribosomal protein L28	J	BX548020	SYNW1279	COG0227	69	8e-14
Ribosomal protein L29	J	BX548020	SYNW2075	COG0255	52	7e-09
Ribosomal protein L2	J	BX548020	SYNW2070	COG0090	345	2e-96
Ribosomal protein L31	J	BX548020	SYNW2095	COG0254	86	6e-19
Ribosomal protein L32	J	BX548020	SYNW1210	COG0333	37	3e-04
Ribosomal protein L33	J	BX548020	SYNW1226	COG0267	46	4e-07
Ribosomal protein L35	J	BX548020	SYNW0058	COG0291	59	4e-11
Ribosomal protein L36	J	BX548020	SYNW2087	COG0257	38	1e-04
Ribosomal protein L3	J	BX548020	SYNW2067	COG0087	241	3e-65
Ribosomal protein L4	J	BX548020	SYNW2068	COG0088	177	6e-46
Ribosomal protein L5	J	BX548020	SYNW2079	COG0094	258	2e-70
Ribosomal protein L6P/L9E	J	BX548020	SYNW2081	COG0097	206	7e-55
Ribosomal protein L7/L12	J	BX548020	SYNW2340	COG0222	96	6e-22
Ribosomal protein L9	J	BX548020	SYNW2378	COG0359	130	5e-32

RIBOSOMAL PROTEINS - SMALL SUBUNIT

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Predicted RNA binding protein (contains ribosomal protein S1 domain)	J	BX548020	SYNW1202	COG1098	42	2e-04
Predicted RNA binding protein (contains ribosomal protein S1 domain)	J	BX548020	SYNW1740	COG1098	53	5e-08
Predicted RNA binding protein (contains ribosomal protein S1 domain)	J	BX548020	SYNW1897	COG1098	78	2e-15
Predicted RNA binding protein (contains ribosomal protein S1 domain)	J	BX548020	SYNW1985	COG1098	84	2e-17
Ribosomal protein S10	J	BX548020	SYNW2139	COG0051	137	2e-34
Ribosomal protein S11	J	BX548020	SYNW2089	COG0100	170	4e-44
Ribosomal protein S12	J	BX548020	SYNW2135	COG0048	184	2e-48
Ribosomal protein S13	J	BX548020	SYNW2088	COG0099	142	7e-36
Ribosomal protein S14	J	BX548020	SYNW1896	COG0199	74	2e-15
Ribosomal protein S15P/S13E	J	BX548020	SYNW1034	COG0184	90	3e-20
Ribosomal protein S16	J	BX548020	SYNW1617	COG0228	84	3e-18
Ribosomal protein S17	J	BX548020	SYNW2076	COG0186	96	3e-22
Ribosomal protein S18	J	BX548020	SYNW1225	COG0238	83	4e-18
Ribosomal protein S19	J	BX548020	SYNW2071	COG0185	139	3e-35
Ribosomal protein S1	J	BX548020	SYNW1202	COG0539	53	7e-08
Ribosomal protein S1	J	BX548020	SYNW1740	COG0539	205	4e-54
Ribosomal protein S1	J	BX548020	SYNW1897	COG0539	80	6e-16
Ribosomal protein S1	J	BX548020	SYNW1985	COG0539	269	2e-73
Ribosomal protein S1	J	BX548020	SYNW2145	COG0539	39	0.001
Ribosomal protein S20	J	BX548020	SYNW0611	COG0268	55	9e-10
Ribosomal protein S21	J	BX548020	SYNW1442	COG0828	34	0.002
Ribosomal protein S2	J	BX548020	SYNW1090	COG0052	324	3e-90
Ribosomal protein S3	J	BX548020	SYNW2073	COG0092	242	1e-65
Ribosomal protein S4 and related protein	J	BX548020	SYNW1694	COG0522	196	8e-52
Ribosomal protein S5	J	BX548020	SYNW2083	COG0098	180	1e-46
Ribosomal protein S6	J	BX548020	SYNW2511	COG0360	97	4e-22
Ribosomal protein S7	J	BX548020	SYNW2136	COG0049	189	7e-50
Ribosomal protein S8	J	BX548020	SYNW2080	COG0096	165	1e-42
Ribosomal protein S9	J	BX548020	SYNW2094	COG0103	153	4e-39

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Ribosome-associated chaperone zuotin	J	BX548020	SYNW0024	COG5269	52	7e-08
Ribosome-associated chaperone zuotin	J	BX548020	SYNW0627	COG5269	36	0.002
Ribosome-associated chaperone zuotin	J	BX548020	SYNW1268	COG5269	44	1e-05
Ribosome-associated chaperone zuotin	J	BX548020	SYNW1934	COG5269	47	2e-06
Ribosome-associated chaperone zuotin	J	BX548020	SYNW2221	COG5269	37	0.001
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	J	BX548020	SYNW2326	COG1188	48	7e-07
Ribosome-associated protein Y (PSrp-1)	J	BX548020	SYNW0667	COG1544	95	4e-21
Ribosome-binding factor A	J	BX548020	SYNW2207	COG0858	104	3e-24
RimM protein required for 16S rRNA processing	J	BX548020	SYNW0149	COG0806	154	3e-39
RNA-binding protein of the Puf family translational repressor	J	BX548020	SYNW2303	COG5099	42	4e-04
RNA-binding protein Rrp4 and related protein (contain S1 domain and KH domain)	J	BX548020	SYNW1740	COG1097	42	7e-05
RNA-binding protein Rrp4 and related protein (contain S1 domain and KH domain)	J	BX548020	SYNW1985	COG1097	42	6e-05
RNase PH	J	BX548020	SYNW0276	COG0689	220	1e-58
RNase PH	J	BX548020	SYNW1897	COG0689	66	1e-11
RNase PH-related exoribonuclease	J	BX548020	SYNW0276	COG2123	68	7e-13
RNase PH-related exoribonuclease	J	BX548020	SYNW1897	COG2123	48	3e-06
RNase P protein component	J	BX548020	SYNW1888	COG0594	40	7e-05
rRNA methylase	J	BX548020	SYNW0719	COG0565	200	7e-53
rRNA methylase	J	BX548020	SYNW0719	COG0566	55	6e-09
rRNA methylase	J	BX548020	SYNW1029	COG0565	50	3e-07
rRNA methylase	J	BX548020	SYNW1029	COG0566	231	7e-62
rRNA methylase	J	BX548020	SYNW1215	COG0565	64	7e-12
rRNA methylase	J	BX548020	SYNW1215	COG0566	79	1e-16
rRNA methylase	J	BX548020	SYNW1631	COG0565	44	1e-05
rRNA methylase	J	BX548020	SYNW1631	COG0566	162	3e-41
rRNA methylase	J	BX548020	SYNW1681	COG0565	39	3e-04
rRNA methylase	J	BX548020	SYNW1681	COG0566	141	4e-35
S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase)	J	BX548020	SYNW0672	COG0809	412	1.0e-116
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase	J	BX548020	SYNW0487	COG2265	36	0.005
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase	J	BX548020	SYNW0684	COG2265	35	0.004
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase	J	BX548020	SYNW0722	COG2265	35	0.004
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase	J	BX548020	SYNW0991	COG2265	36	0.003
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase	J	BX548020	SYNW1148	COG2265	44	1e-05
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase	J	BX548020	SYNW1228	COG2265	351	4e-98
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase	J	BX548020	SYNW1674	COG2265	40	1e-04
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase	J	BX548020	SYNW1679	COG2265	43	5e-05
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase	J	BX548020	SYNW1976	COG2265	40	2e-04
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase	J	BX548020	SYNW2141	COG2265	35	0.006
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase	J	BX548020	SYNW2287	COG2265	42	4e-05
Selenocysteine-specific translation elongation factor	J	BX548020	SYNW0597	COG3276	83	6e-17
Selenocysteine-specific translation elongation factor	J	BX548020	SYNW0657	COG3276	39	8e-04
Selenocysteine-specific translation elongation factor	J	BX548020	SYNW1109	COG3276	72	9e-14
Selenocysteine-specific translation elongation factor	J	BX548020	SYNW1149	COG3276	57	3e-09
Selenocysteine-specific translation elongation factor	J	BX548020	SYNW1684	COG3276	83	7e-17
Selenocysteine-specific translation elongation factor	J	BX548020	SYNW2137	COG3276	51	3e-07
Selenocysteine-specific translation elongation factor	J	BX548020	SYNW2138	COG3276	190	1e-49
Superfamily II DNA and RNA helicase	J	BX548020	SYNW0077	COG0513	66	1e-11
Superfamily II DNA and RNA helicase	J	BX548020	SYNW0636	COG0513	57	4e-09
Superfamily II DNA and RNA helicase	J	BX548020	SYNW0689	COG0513	41	2e-04
Superfamily II DNA and RNA helicase	J	BX548020	SYNW0920	COG0513	418	1.0e-118
Superfamily II DNA and RNA helicase	J	BX548020	SYNW1093	COG0513	64	5e-11
Superfamily II DNA and RNA helicase	J	BX548020	SYNW1177	COG0513	67	7e-12
Superfamily II DNA and RNA helicase	J	BX548020	SYNW1322	COG0513	108	2e-24
Superfamily II DNA and RNA helicase	J	BX548020	SYNW1782	COG0513	41	4e-04
Superfamily II DNA and RNA helicase	J	BX548020	SYNW1958	COG0513	102	6e-23
Superfamily II DNA and RNA helicase	J	BX548020	SYNW2179	COG0513	76	9e-15
Superfamily II DNA and RNA helicase	J	BX548020	SYNW2362	COG0513	37	0.006
Translation elongation factor EF-1alpha (GTPase)	J	BX548020	SYNW0597	COG5256	92	1e-19
Translation elongation factor EF-1alpha (GTPase)	J	BX548020	SYNW0657	COG5256	39	0.001
Translation elongation factor EF-1alpha (GTPase)	J	BX548020	SYNW1109	COG5256	119	4e-28
Translation elongation factor EF-1alpha (GTPase)	J	BX548020	SYNW1149	COG5256	78	2e-15
Translation elongation factor EF-1alpha (GTPase)	J	BX548020	SYNW1684	COG5256	125	8e-30
Translation elongation factor EF-1alpha (GTPase)	J	BX548020	SYNW2137	COG5256	69	9e-13
Translation elongation factor EF-1alpha (GTPase)	J	BX548020	SYNW2138	COG5256	256	2e-69

TRANSLATION FACTORS AND ENZYMES INVOLVED IN TRANSLATION

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
GTPase - translation elongation factors	J	BX548020	SYNW0597	COG0050	78	2e-15
GTPase - translation elongation factors	J	BX548020	SYNW1109	COG0050	119	5e-28
GTPase - translation elongation factors	J	BX548020	SYNW1149	COG0050	70	5e-13
GTPase - translation elongation factors	J	BX548020	SYNW1684	COG0050	91	2e-19
GTPase - translation elongation factors	J	BX548020	SYNW2137	COG0050	66	9e-12
GTPase - translation elongation factors	J	BX548020	SYNW2138	COG0050	671	0.0
Methionine aminopeptidase	J	BX548020	SYNW0506	COG0024	96	5e-21
Methionine aminopeptidase	J	BX548020	SYNW1822	COG0024	319	1e-88
Methionyl-tRNA formyltransferase	J	BX548020	SYNW1195	COG0223	287	6e-79
Methionyl-tRNA formyltransferase	J	BX548020	SYNW1261	COG0223	81	6e-17
Methionyl-tRNA formyltransferase	J	BX548020	SYNW2504	COG0223	73	3e-14
N-formylmethionyl-tRNA deformylase	J	BX548020	SYNW0324	COG0242	183	9e-48
Peptidyl-tRNA hydrolase	J	BX548020	SYNW0271	COG0193	226	6e-61
Predicted translation initiation factor 2B subunit eIF-2B alpha/beta/delta family	J	BX548020	SYNW1962	COG0182	365	1.0e-102
Protein chain release factor A	J	BX548020	SYNW2096	COG0216	429	1.0e-121
Protein chain release factor A	J	BX548020	SYNW2311	COG0216	231	4e-62
Protein chain release factor A	J	BX548020	SYNW2420	COG0216	46	1e-06
Protein chain release factor B	J	BX548020	SYNW2096	COG1186	177	9e-46
Protein chain release factor B	J	BX548020	SYNW2311	COG1186	333	9e-93
Protein chain release factor B	J	BX548020	SYNW2420	COG1186	89	1e-19
Ribosome recycling factor	J	BX548020	SYNW1753	COG0233	211	3e-56
Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)	J	BX548020	SYNW0033	COG0231	156	7e-40
Translation elongation factors (GTPase)	J	BX548020	SYNW0504	COG0480	39	7e-04
Translation elongation factors (GTPase)	J	BX548020	SYNW0597	COG0480	90	6e-19
Translation elongation factors (GTPase)	J	BX548020	SYNW0657	COG0480	39	5e-04
Translation elongation factors (GTPase)	J	BX548020	SYNW1109	COG0480	158	1e-39
Translation elongation factors (GTPase)	J	BX548020	SYNW1149	COG0480	262	6e-71
Translation elongation factors (GTPase)	J	BX548020	SYNW1684	COG0480	148	2e-36
Translation elongation factors (GTPase)	J	BX548020	SYNW2137	COG0480	953	0.0
Translation elongation factors (GTPase)	J	BX548020	SYNW2138	COG0480	88	1e-18
Translation elongation factor Ts	J	BX548020	SYNW1091	COG0264	145	2e-36
Translation initiation factor 1 (eIF-1/SUI1) and related protein	J	BX548020	SYNW2282	COG0023	77	3e-16
Translation initiation factor 1 (IF-1)	J	BX548020	SYNW0686	COG0361	69	5e-14
Translation initiation factor 2 alpha subunit (eIF-2alpha)	J	BX548020	SYNW1202	COG1093	40	8e-04
Translation initiation factor 2 alpha subunit (eIF-2alpha)	J	BX548020	SYNW1740	COG1093	51	2e-07
Translation initiation factor 2 alpha subunit (eIF-2alpha)	J	BX548020	SYNW1897	COG1093	64	4e-11
Translation initiation factor 2 alpha subunit (eIF-2alpha)	J	BX548020	SYNW1985	COG1093	58	1e-09
Translation initiation factor 2B subunit eIF-2B alpha/beta/delta family	J	BX548020	SYNW1962	COG1184	152	3e-38
Translation initiation factor 2 (IF-2; GTPase)	J	BX548020	SYNW0504	COG0532	44	2e-05
Translation initiation factor 2 (IF-2; GTPase)	J	BX548020	SYNW0597	COG0532	609	1.0e-175
Translation initiation factor 2 (IF-2; GTPase)	J	BX548020	SYNW0657	COG0532	37	0.003
Translation initiation factor 2 (IF-2; GTPase)	J	BX548020	SYNW1109	COG0532	66	7e-12
Translation initiation factor 2 (IF-2; GTPase)	J	BX548020	SYNW1149	COG0532	60	6e-10
Translation initiation factor 2 (IF-2; GTPase)	J	BX548020	SYNW1684	COG0532	94	3e-20
Translation initiation factor 2 (IF-2; GTPase)	J	BX548020	SYNW2137	COG0532	57	4e-09
Translation initiation factor 2 (IF-2; GTPase)	J	BX548020	SYNW2138	COG0532	83	3e-17
Translation initiation factor 3 (IF-3)	J	BX548020	SYNW0093	COG0290	209	1e-55

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Translation initiation factor 2 gamma subunit (eIF-2gamma; GTPase)	J	BX548020	SYNW0597	COG5257	79	1e-15
Translation initiation factor 2 gamma subunit (eIF-2gamma; GTPase)	J	BX548020	SYNW1109	COG5257	72	1e-13
Translation initiation factor 2 gamma subunit (eIF-2gamma; GTPase)	J	BX548020	SYNW1684	COG5257	59	1e-09
Translation initiation factor 2 gamma subunit (eIF-2gamma; GTPase)	J	BX548020	SYNW2137	COG5257	36	0.007
Translation initiation factor 2 gamma subunit (eIF-2gamma; GTPase)	J	BX548020	SYNW2138	COG5257	156	3e-39
tRNA(1-methyladenosine) methyltransferase and related methyltransferase	J	BX548020	SYNW0104	COG2519	38	0.002
tRNA(1-methyladenosine) methyltransferase and related methyltransferase	J	BX548020	SYNW0439	COG2519	38	7e-04
tRNA(1-methyladenosine) methyltransferase and related methyltransferase	J	BX548020	SYNW0487	COG2519	39	4e-04
tRNA(1-methyladenosine) methyltransferase and related methyltransferase	J	BX548020	SYNW0684	COG2519	48	1e-06
tRNA(1-methyladenosine) methyltransferase and related methyltransferase	J	BX548020	SYNW1052	COG2519	36	0.003
tRNA(1-methyladenosine) methyltransferase and related methyltransferase	J	BX548020	SYNW1228	COG2519	40	4e-04
tRNA(1-methyladenosine) methyltransferase and related methyltransferase	J	BX548020	SYNW1674	COG2519	34	0.009
tRNA and rRNA cytosine-C5-methylase	J	BX548020	SYNW0722	COG0144	35	0.005
tRNA and rRNA cytosine-C5-methylase	J	BX548020	SYNW1674	COG0144	34	0.008
tRNA and rRNA cytosine-C5-methylase	J	BX548020	SYNW1679	COG0144	270	1e-73
tRNA delta(2)-isopentenylpyrophosphate transferase	J	BX548020	SYNW0063	COG0324	36	0.005
tRNA delta(2)-isopentenylpyrophosphate transferase	J	BX548020	SYNW0094	COG0324	270	6e-74
tRNA-dihydrouridine synthase	J	BX548020	SYNW0015	COG0042	239	2e-64
tRNA-dihydrouridine synthase	J	BX548020	SYNW0655	COG0042	281	7e-77
tRNA-dihydrouridine synthase	J	BX548020	SYNW0773	COG0042	41	6e-05
tRNA-(guanine-N1)-methyltransferase	J	BX548020	SYNW1610	COG0336	320	8e-89
tRNA nucleotidyltransferase/poly(A) polymerase	J	BX548020	SYNW0188	COG0617	143	2e-35
tRNA nucleotidyltransferase/poly(A) polymerase	J	BX548020	SYNW2254	COG0617	110	2e-25
Truncated possibly inactive lysyl-tRNA synthetase (class II)	J	BX548020	SYNW0127	COG2269	203	2e-53
Truncated possibly inactive lysyl-tRNA synthetase (class II)	J	BX548020	SYNW2426	COG2269	65	2e-11

SiteMap Feedback Life Sciences Division ORNL Disclaimer Webmaster