Top 20 Categories

Top 20 InterPro

206	NULL	NULL
168	IPR003593	AAA+ ATPase, core
137	IPR003439	ABC transporter-like
79	IPR001789	Signal transduction response regulator, receiver region
66	IPR002198	Short-chain dehydrogenase/reductase SDR
62	IPR000515	Binding-protein-dependent transport systems inner membrane component
61	IPR006311	Twin-arginine translocation pathway signal
61	IPR003594	ATP-binding region, ATPase-like
58	IPR002347	Glucose/ribitol dehydrogenase
55	IPR005467	Signal transduction histidine kinase, core
52	IPR004358	Signal transduction histidine kinase-related protein, C-terminal
46	IPR001851	Bacterial inner-membrane translocator
46	IPR000014	PAS
44	IPR003661	Signal transduction histidine kinase, subgroup 1, dimerisation and phosphoacceptor region
41	IPR013968	Polyketide synthase, KR
41	IPR000873	AMP-dependent synthetase and ligase
40	IPR003660	Signal transduction histidine kinase, HAMP region
39	IPR011701	Major facilitator superfamily MFS-1
37	IPR001647	Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal
36	IPR006076	FAD dependent oxidoreductase

Top 20 HMMPfam

126	PF00005	ABC_tran
76	PF00072	Response_reg
64	PF00106	adh_short
62	PF00528	BPD_transp_1
61	PF02518	HATPase_c
46	PF02653	BPD_transp_2
44	PF00512	HisKA
41	PF08659	KR
41	PF00501	AMP-binding
39	PF07690	MFS_1
38	PF00672	HAMP
36	PF01266	DAO
36	PF00440	TetR_N
33	PF01370	Epimerase
33	PF00990	GGDEF
33	PF00989	PAS
32	PF08448	PAS_4
31	PF00441	Acyl-CoA_dh_1
30	PF08241	Methyltransf_11
30	PF00378	ECH

Top 20 HMMTigr

61	TIGR01409	TAT_signal_seq
41	TIGR00229	sensory_box
33	TIGR00254	GGDEF
24	TIGR01730	RND_mfp
18	TIGR02937	sigma70-ECF
13	TIGR00231	small_GTP
11	TIGR01783	TonB-siderophor
10	TIGR01494	ATPase_P-type
8	TIGR01509	HAD-SF-IA-v3
7	TIGR01930	AcCoA-C-Actrans
7	TIGR01525	ATPase-IB_hvy
7	TIGR00369	unchar_dom_1
6	TIGR01727	oligo_HPY
6	TIGR01414	autotrans_barl
6	TIGR00914	2A0601
5	TIGR02607	antidote_HigA
5	TIGR02283	MltB_2
5	TIGR01326	OAH_OAS_sulfhy
5	TIGR00915	2A0602
5	TIGR00786	dctM

Top 20 ProfileScan

126	PS50893	ABC_TRANSPORTER_2
79	PS50110	RESPONSE_REGULATORY
71	PS00013	PROKAR_LIPOPROTEIN
62	PS50928	ABC_TM1
55	PS50109	HIS_KIN
39	PS50885	HAMP
35	PS50977	HTH_TETR_2
35	PS50850	MFS
35	PS50112	PAS
33	PS50887	GGDEF
29	PS50111	CHEMOTAXIS_TRANSDUC_2
26	PS51186	GNAT
26	PS50931	HTH_LYSR
24	PS50113	PAC
24	PS01124	HTH_ARAC_FAMILY_2
21	PS50943	HTH_CROC1
21	PS50192	T_SNARE
20	PS51007	CYTC
19	PS50995	HTH_MARR_2
17	PS50883	EAL

Top 20 FPrintScan

58	PR00081	GDHRDH
52	PR00344	BCTRLSENSOR
48	PR00080	SDRFAMILY
38	PR00154	AMPBINDING
29	PR00455	HTHTETR
25	PR00368	FADPNR
23	PR00702	ACRIFLAVINRP
22	PR00039	HTHLYSR
22	PR00032	HTHARAC
21	PR01590	HTHFIS
20	PR01167	INSADHFAMILY
20	PR00260	CHEMTRNSDUCR
17	PR00411	PNDRDTASEI
16	PR00111	ABHYDROLASE
15	PR00469	PNDRDTASEII
15	PR00420	RNGMNOXGNASE
13	PR00412	EPOXHYDRLASE
13	PR00353	4FE4SFRDOXIN
13	PR00038	HTHLUXR
10	PR00598	HTHMARR

Top 20 BlastProDom

121	PD000006	sp_Q6NDQ6_RHOPA_Q6NDQ6;
77	PD000039	sp_CHB3_RHOPA_P62645;
13	PD000307	sp_Q6NCZ5_RHOPA_Q6NCZ5;
12	PD000329	sp_Q89WQ8_BRAJA_Q89WQ8;
12	PD000139	sp_Q8KTE3_METEX_Q8KTE3;
8	PD000930	sp_Q6ND96_RHOPA_Q6ND96;
7	PD000001	sp_Q6AHM0_BBBBB_Q6AHM0;
6	PD001979	sp_LHB1_RHOSH_P02951;
6	PD000288	sp_Q6N995_RHOPA_Q6N995;
5	PD139017	sp_Q6NCR8_RHOPA_Q6NCR8;
5	PD020774	sp_Q6NDR8_RHOPA_Q6NDR8;
5	PD002334	sp_Q726M7_DESVH_Q726M7;
5	PD001895	sp_Q6NCE7_RHOPA_Q6NCE7;
5	PD001859	sp_Q6NBD0_RHOPA_Q6NBD0;
4	PD454109	sp_Q8XC86_ECO57_Q8XC86;
4	PD354634	sp_Q8D5M6_VIBVU_Q8D5M6;
4	PD023420	sp_Q6NBC4_RHOPA_Q6NBC4;
4	PD008688	sp_Q6N9R2_RHOPA_Q6N9R2;
4	PD002691	sp_Q6N9S5_RHOPA_Q6N9S5;
4	PD002183	sp_Q6N6Z3_RHOPA_Q6N6Z3;

Top 20 COGs

258	COG4988	ABC-type transport system involved in cytochrome bd biosynthesis ATPase and permease components
252	COG4987	ABC-type transport system involved in cytochrome bd biosynthesis fused ATPase and permease components
252	COG4555	ABC-type Na+ transport system ATPase component
252	COG1124	ABC-type dipeptide/oligopeptide/nickel transport system ATPase component
252	COG1120	ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components
252	COG0444	ABC-type dipeptide/oligopeptide/nickel transport system ATPase component
250	COG1134	ABC-type polysaccharide/polyol phosphate transport system ATPase component
248	COG4615	ABC-type siderophore export system fused ATPase and permease components
164	COG2197	Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
158	COG0745	Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
150	COG4565	Response regulator of citrate/malate metabolism
150	COG3437	Response regulator containing a CheY-like receiver domain and an HD-GYP domain
132	COG3279	Response regulator of the LytR/AlgR family
130	COG1245	Predicted ATPase RNase L inhibitor (RLI) homolog
129	COG4178	ABC-type uncharacterized transport system permease and ATPase components
128	COG4148	ABC-type molybdate transport system ATPase component
128	COG1136	ABC-type antimicrobial peptide transport system ATPase component
128	COG1132	ABC-type multidrug transport system ATPase and permease components
128	COG1131	ABC-type multidrug transport system ATPase component
128	COG1122	ABC-type cobalt transport system ATPase component

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