Top 20 Categories

Top 20 InterPro

159	IPR003593	AAA+ ATPase, core
158	NULL	NULL
137	IPR003439	ABC transporter related
79	IPR001789	Response regulator receiver
67	IPR000515	Binding-protein-dependent transport systems inner membrane component
62	IPR003594	ATP-binding region, ATPase-like
57	IPR002198	Short-chain dehydrogenase/reductase SDR
55	IPR005467	Histidine kinase
50	IPR002347	Glucose/ribitol dehydrogenase
49	IPR006311	Twin-arginine translocation pathway signal
48	IPR004358	Histidine kinase related protein, C-terminal
46	IPR003661	Histidine kinase A, N-terminal
44	IPR001851	Bacterial inner-membrane translocator
42	IPR003660	Histidine kinase, HAMP region
38	IPR011701	Major facilitator superfamily MFS_1
36	IPR000014	PAS
34	IPR013968	KR
34	IPR000873	AMP-dependent synthetase and ligase
33	IPR000160	GGDEF
32	IPR013027	FAD-dependent pyridine nucleotide-disulphide oxidoreductase

Top 20 HMMPfam

133	PF00005	ABC_tran
77	PF00072	Response_reg
67	PF00528	BPD_transp_1
62	PF02518	HATPase_c
55	PF00106	adh_short
46	PF00512	HisKA
44	PF02653	BPD_transp_2
42	PF00672	HAMP
38	PF07690	MFS_1
34	PF08659	KR
34	PF00501	AMP-binding
33	PF00990	GGDEF
32	PF01266	DAO
31	PF01370	Epimerase
29	PF08241	Methyltransf_11
28	PF00015	MCPsignal
27	PF08242	Methyltransf_12
27	PF00561	Abhydrolase_1
27	PF00441	Acyl-CoA_dh_1
27	PF00440	TetR_N

Top 20 HMMTigr

49	TIGR01409	TAT_signal_seq
33	TIGR00254	GGDEF
32	TIGR00229	sensory_box
22	TIGR02937	sigma70-ECF
19	TIGR01730	RND_mfp
13	TIGR00231	small_GTP
9	TIGR01783	TonB-siderophor
9	TIGR01509	HAD-SF-IA-v3
9	TIGR00369	unchar_dom_1
8	TIGR01727	oligo_HPY
6	TIGR01930	AcCoA-C-Actrans
5	TIGR02283	MltB_2
5	TIGR01901	adhes_NPXG
5	TIGR01494	ATPase_P-type
4	TIGR02037	degP_htrA_DO
4	TIGR01844	type_I_sec_TolC
4	TIGR01549	HAD-SF-IA-v1
4	TIGR01352	tonB_Cterm
4	TIGR01326	OAH_OAS_sulfhy
4	TIGR01097	3A0109s02M

Top 20 ProfileScan

133	PS50893	ABC_TRANSPORTER_2
79	PS50110	RESPONSE_REGULATORY
67	PS50928	ABC_TM1
55	PS50109	HIS_KIN
50	PS00013	PROKAR_LIPOPROTEIN
40	PS50885	HAMP
33	PS50887	GGDEF
29	PS50850	MFS
28	PS50111	CHEMOTAXIS_TRANSDUC_2
25	PS50977	HTH_TETR_2
25	PS50931	HTH_LYSR
25	PS50112	PAS
21	PS51186	GNAT
20	PS50192	T_SNARE
20	PS50113	PAC
19	PS51085	2FE2S_FER_2
18	PS51007	CYTC
17	PS01124	HTH_ARAC_FAMILY_2
16	PS50995	HTH_MARR_2
16	PS50883	EAL

Top 20 FPrintScan

50	PR00081	GDHRDH
48	PR00344	BCTRLSENSOR
42	PR00080	SDRFAMILY
30	PR00154	AMPBINDING
28	PR00368	FADPNR
24	PR00455	HTHTETR
22	PR00411	PNDRDTASEI
19	PR00039	HTHLYSR
18	PR00469	PNDRDTASEII
18	PR00260	CHEMTRNSDUCR
18	PR00111	ABHYDROLASE
17	PR00702	ACRIFLAVINRP
17	PR00420	RNGMNOXGNASE
16	PR00032	HTHARAC
14	PR01590	HTHFIS
14	PR01167	INSADHFAMILY
13	PR00412	EPOXHYDRLASE
13	PR00038	HTHLUXR
12	PR00598	HTHMARR
12	PR00353	4FE4SFRDOXIN

Top 20 BlastProDom

121	PD000006	sp_Q6NC99_RHOPA_Q6NC99;
77	PD000039	sp_Q6NC89_RHOPA_Q6NC89;
15	PD000329	sp_Q89WQ8_BRAJA_Q89WQ8;
14	PD000307	sp_Q6N7Z5_RHOPA_Q6N7Z5;
12	PD000139	sp_Q8KTE3_METEX_Q8KTE3;
9	PD186071	sp_Q6N0U5_RHOPA_Q6N0U5;
9	PD000930	sp_Q6ND96_RHOPA_Q6ND96;
7	PD020774	sp_Q89W65_BRAJA_Q89W65;
6	PD001979	sp_LHB1_RHOGE_P51757;
5	PD139017	sp_Q6NCR8_RHOPA_Q6NCR8;
5	PD002334	sp_Q6N3D3_RHOPA_Q6N3D3;
5	PD001895	sp_Q6NC95_RHOPA_Q6NC95;
5	PD000621	sp_Q6NAL1_RHOPA_Q6NAL1;
4	PD454109	sp_EAEB_ECO27_Q05129;
4	PD354634	sp_Q8D5M6_VIBVU_Q8D5M6;
4	PD149803	sp_Q89DR5_BRAJA_Q89DR5;
4	PD023420	sp_Q6NAM8_RHOPA_Q6NAM8;
4	PD008688	sp_Q6N0P5_RHOPA_Q6N0P5;
4	PD002183	sp_HEB2_ANAVA_P46052;
4	PD001859	sp_Q6N4Z3_RHOPA_Q6N4Z3;

Top 20 COGs

268	COG4988	ABC-type transport system involved in cytochrome bd biosynthesis ATPase and permease components
268	COG4987	ABC-type transport system involved in cytochrome bd biosynthesis fused ATPase and permease components
268	COG0444	ABC-type dipeptide/oligopeptide/nickel transport system ATPase component
266	COG4555	ABC-type Na+ transport system ATPase component
266	COG1124	ABC-type dipeptide/oligopeptide/nickel transport system ATPase component
266	COG1120	ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components
264	COG1134	ABC-type polysaccharide/polyol phosphate transport system ATPase component
260	COG4615	ABC-type siderophore export system fused ATPase and permease components
166	COG2197	Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
158	COG0745	Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
146	COG3437	Response regulator containing a CheY-like receiver domain and an HD-GYP domain
140	COG4565	Response regulator of citrate/malate metabolism
140	COG1245	Predicted ATPase RNase L inhibitor (RLI) homolog
139	COG0488	ATPase components of ABC transporter with duplicated ATPase domains
138	COG1131	ABC-type multidrug transport system ATPase component
136	COG2274	ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain
135	COG4618	ABC-type protease/lipase transport system ATPase and permease components
135	COG4178	ABC-type uncharacterized transport system permease and ATPase components
135	COG4175	ABC-type proline/glycine betaine transport system ATPase component
135	COG4148	ABC-type molybdate transport system ATPase component

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