| Kingdom |
Category |
Genus/Species |
Count |
|
|
|
19 |
| Archaea |
|
|
8 |
| |
|
|
19 |
| |
Crenarchaeota |
|
1 |
| |
|
Staphylothermus marinus (smr) |
1 |
| |
Euryarchaeota |
|
7 |
| |
|
Archaeoglobus fulgidus (afu) |
1 |
| |
|
Methanosarcina acetivorans (mac) |
1 |
| |
|
Methanopyrus kandleri (mka) |
1 |
| |
|
Methanosarcina mazei (mma) |
1 |
| |
|
Methanococcus vannielii (mvn) |
1 |
| |
|
Natronomonas pharaonis (nph) |
1 |
| |
|
Thermoplasma acidophilum (tac) |
1 |
| Bacteria |
|
|
4160 |
| |
Acidobacteria |
|
4 |
| |
|
Acidobacteria bacterium (aba) |
2 |
| |
|
Solibacter usitatus (sus) |
2 |
| |
Actinobacteria |
|
27 |
| |
|
Acidothermus cellulolyticus (ace) |
1 |
| |
|
Arthrobacter sp. FB24 (art) |
1 |
| |
|
Corynebacterium glutamicum R (cgt) |
1 |
| |
|
Corynebacterium jeikeium (cjk) |
1 |
| |
|
Frankia alni (fal) |
1 |
| |
|
Frankia sp. EAN1pec (fre) |
1 |
| |
|
Kineococcus radiotolerans (kra) |
1 |
| |
|
Mycobacterium avium 104 (mav) |
2 |
| |
|
Mycobacterium gilvum (mgi) |
2 |
| |
|
Mycobacterium tuberculosis CDC1551 (mtc) |
1 |
| |
|
Mycobacterium ulcerans (mul) |
1 |
| |
|
Mycobacterium vanbaalenii (mva) |
1 |
| |
|
Nocardia farcinica (nfa) |
3 |
| |
|
Rhodococcus sp. RHA1 (rha) |
1 |
| |
|
Rubrobacter xylanophilus (rxy) |
1 |
| |
|
Salinispora arenicola (saq) |
1 |
| |
|
Streptomyces coelicolor (sco) |
3 |
| |
|
Saccharopolyspora erythraea (sen) |
2 |
| |
|
Streptomyces avermitilis (sma) |
1 |
| |
|
Salinispora tropica (stp) |
1 |
| |
Bacteroides |
|
4 |
| |
|
Flavobacterium johnsoniae (fjo) |
3 |
| |
|
Flavobacterium psychrophilum (fps) |
1 |
| |
Chlamydia |
|
1 |
| |
|
Candidatus Protochlamydia amoebophila (pcu) |
1 |
| |
Cyanobacteria |
|
19 |
| |
|
Acaryochloris marina (amr) |
3 |
| |
|
Anabaena sp. PCC7120 (ana) |
2 |
| |
|
Anabaena variabilis (ava) |
5 |
| |
|
Cyanobacteria Yellowstone A-Prime (cya) |
1 |
| |
|
Cyanobacteria Yellowstone B-Prime (cyb) |
1 |
| |
|
Gloeobacter violaceus (gvi) |
6 |
| |
|
Synechococcus elongatus PCC7942 (syf) |
1 |
| |
Deinococcus-Thermus |
|
1 |
| |
|
Deinococcus radiodurans (dra) |
1 |
| |
Firmicutes |
|
16 |
| |
|
Alkaliphilus metalliredigens (amt) |
1 |
| |
|
Alkaliphilus oremlandii (aoe) |
1 |
| |
|
Bacillus subtilis (bsu) |
1 |
| |
|
Clostridium acetobutylicum (cac) |
1 |
| |
|
Carboxydothermus hydrogenoformans (chy) |
2 |
| |
|
Geobacillus kaustophilus (gka) |
1 |
| |
|
Geobacillus thermodenitrificans (gtn) |
1 |
| |
|
Moorella thermoacetica (mta) |
1 |
| |
|
Pelotomaculum thermopropionicum (pth) |
3 |
| |
|
Symbiobacterium thermophilum (sth) |
1 |
| |
|
Syntrophomonas wolfei (swo) |
2 |
| |
|
Thermoanaerobacter tengcongensis (tte) |
1 |
| |
Green nonsulfur bacteria |
|
4 |
| |
|
Chloroflexus aurantiacus (cau) |
1 |
| |
|
Herpetosiphon aurantiacus (hau) |
1 |
| |
|
Roseiflexus castenholzii DSM13941 (rca) |
1 |
| |
|
Roseiflexus sp. RS-1 (rrs) |
1 |
| |
Green sulfur bacteria |
|
8 |
| |
|
Chlorobium chlorochromatii (cch) |
2 |
| |
|
Chlorobium phaeobacteroides (cph) |
2 |
| |
|
Chlorobaculum tepidum (cte) |
1 |
| |
|
Pelodictyon luteolum (plt) |
2 |
| |
|
Prosthecochloris vibrioformis (pvi) |
1 |
| |
Hyperthermophilic bacteria |
|
1 |
| |
|
Thermotoga lettingae (tle) |
1 |
| |
Planctomyces |
|
2 |
| |
|
Rhodopirellula baltica (rba) |
2 |
| |
Proteobacteria |
|
4073 |
| |
|
Acidovorax avenae (aav) |
5 |
| |
|
Acidiphilium cryptum JF-5 (acr) |
8 |
| |
|
Anaeromyxobacter dehalogenans (ade) |
4 |
| |
|
Alkalilimnicola ehrlichei (aeh) |
4 |
| |
|
Anaeromyxobacter sp. Fw109-5 (afw) |
3 |
| |
|
Acidovorax sp. JS42 (ajs) |
6 |
| |
|
Agrobacterium tumefaciens C58 (Cereon) (atc) |
20 |
| |
|
Agrobacterium tumefaciens C58 (UWash/Dupont) (atu) |
1 |
| |
|
Azorhizobium caulinodans (azc) |
47 |
| |
|
Azoarcus sp. BH72 (azo) |
8 |
| |
|
Burkholderia cepacia (bam) |
4 |
| |
|
Bdellovibrio bacteriovorus (bba) |
1 |
| |
|
Bordetella bronchiseptica (bbr) |
8 |
| |
|
Bradyrhizobium sp. BTAi1 (bbt) |
599 |
| |
|
Burkholderia cenocepacia HI2424 (bch) |
4 |
| |
|
Brucella canis (bcs) |
1 |
| |
|
Bradyrhizobium japonicum (bja) |
1216 |
| |
|
Brucella abortus (bmb) |
1 |
| |
|
Burkholderia mallei NCTC 10247 (bmn) |
1 |
| |
|
Burkholderia multivorans (bmu) |
1 |
| |
|
Burkholderia mallei SAVP1 (bmv) |
1 |
| |
|
Bordetella parapertussis (bpa) |
1 |
| |
|
Burkholderia pseudomallei 668 (bpd) |
2 |
| |
|
Bordetella petrii (bpt) |
4 |
| |
|
Bradyrhizobium sp. ORS278 (bra) |
486 |
| |
|
Burkholderia thailandensis (bte) |
2 |
| |
|
Burkholderia sp. 383 (bur) |
6 |
| |
|
Burkholderia vietnamiensis (bvi) |
4 |
| |
|
Burkholderia xenovorans (bxe) |
7 |
| |
|
Coxiella burnetii Dugway 7E9-12 (cbd) |
1 |
| |
|
Caulobacter crescentus (ccr) |
10 |
| |
|
Citrobacter koseri ATCC BAA-895 (cko) |
1 |
| |
|
Colwellia psychrerythraea (cps) |
2 |
| |
|
Delftia acidovorans (dac) |
4 |
| |
|
Dechloromonas aromatica (dar) |
11 |
| |
|
Desulfovibrio desulfuricans (dde) |
2 |
| |
|
Candidatus Desulfococcus oleovorans (dol) |
4 |
| |
|
Desulfotalea psychrophila (dps) |
1 |
| |
|
Dinoroseobacter shibae (dsh) |
3 |
| |
|
Azoarcus sp. EbN1 (eba) |
18 |
| |
|
Erwinia carotovora (eca) |
1 |
| |
|
Escherichia coli O157 Sakai (EHEC) (ecs) |
1 |
| |
|
Escherichia coli APEC O1 (ecv) |
1 |
| |
|
Erythrobacter litoralis (eli) |
1 |
| |
|
Enterobacter sakazakii (esa) |
1 |
| |
|
Francisella tularensis subsp. novicida U112 (ftn) |
1 |
| |
|
Granulobacter bethesdensis (gbe) |
5 |
| |
|
Gluconacetobacter diazotrophicus (gdi) |
5 |
| |
|
Geobacter metallireducens (gme) |
4 |
| |
|
Gluconobacter oxydans (gox) |
1 |
| |
|
Geobacter sulfurreducens (gsu) |
1 |
| |
|
Geobacter uraniumreducens (gur) |
4 |
| |
|
Herminiimonas arsenicoxydans (har) |
7 |
| |
|
Hahella chejuensis (hch) |
4 |
| |
|
Halorhodospira halophila (hha) |
18 |
| |
|
Hyphomonas neptunium (hne) |
4 |
| |
|
Jannaschia sp. CCS1 (jan) |
7 |
| |
|
Klebsiella pneumoniae (kpn) |
1 |
| |
|
Magnetospirillum magneticum (mag) |
30 |
| |
|
Marinobacter aquaeolei (maq) |
2 |
| |
|
Methylococcus capsulatus (mca) |
7 |
| |
|
Mesorhizobium sp. BNC1 (mes) |
21 |
| |
|
Methylobacterium extorquens (mex) |
34 |
| |
|
Magnetococcus sp. MC-1 (mgm) |
1 |
| |
|
Mesorhizobium loti (mlo) |
36 |
| |
|
Maricaulis maris (mmr) |
4 |
| |
|
Minibacterium massiliensis (mms) |
3 |
| |
|
Methylibium petroleiphilum (mpt) |
6 |
| |
|
Myxococcus xanthus (mxa) |
4 |
| |
|
Novosphingobium aromaticivorans (nar) |
5 |
| |
|
Nitrosomonas europaea (neu) |
1 |
| |
|
Nitrobacter hamburgensis (nha) |
734 |
| |
|
Nitrosospira multiformis (nmu) |
1 |
| |
|
Nitrosococcus oceani (noc) |
3 |
| |
|
Nitrobacter winogradskyi (nwi) |
217 |
| |
|
Ochrobactrum anthropi (oan) |
17 |
| |
|
Pseudomonas aeruginosa PA7 (pap) |
6 |
| |
|
Paracoccus denitrificans (pde) |
9 |
| |
|
Pseudomonas entomophila (pen) |
4 |
| |
|
Pseudomonas fluorescens Pf-5 (pfl) |
3 |
| |
|
Pseudomonas fluorescens PfO-1 (pfo) |
2 |
| |
|
Pseudoalteromonas haloplanktis (pha) |
1 |
| |
|
Parvibaculum lavamentivorans (pla) |
16 |
| |
|
Pseudomonas mendocina (pmy) |
3 |
| |
|
Polaromonas naphthalenivorans (pna) |
11 |
| |
|
Polaromonas sp. JS666 (pol) |
4 |
| |
|
Pelobacter propionicus (ppd) |
3 |
| |
|
Pseudomonas putida F1 (ppf) |
2 |
| |
|
Pseudomonas syringae pv. syringae B728a (psb) |
1 |
| |
|
Pseudomonas syringae pv. phaseolicola 1448A (psp) |
1 |
| |
|
Pseudomonas syringae pv. tomato DC3000 (pst) |
3 |
| |
|
Candidatus Pelagibacter ubique (pub) |
1 |
| |
|
Rickettsia canadensis McKiel (rcm) |
1 |
| |
|
Roseobacter denitrificans (rde) |
1 |
| |
|
Ralstonia eutropha H16 (reh) |
8 |
| |
|
Rhizobium etli (ret) |
8 |
| |
|
Ralstonia eutropha JMP134 (reu) |
6 |
| |
|
Rickettsia felis (rfe) |
1 |
| |
|
Rhodoferax ferrireducens (rfr) |
9 |
| |
|
Rhizobium leguminosarum (rle) |
20 |
| |
|
Ralstonia metallidurans (rme) |
3 |
| |
|
Rhodospirillum rubrum (rru) |
33 |
| |
|
Rhodobacter sphaeroides ATCC 17029 (rsh) |
6 |
| |
|
Ralstonia solanacearum (rso) |
7 |
| |
|
Rhodobacter sphaeroides 2.4.1 (rsp) |
9 |
| |
|
Rhodobacter sphaeroides ATCC 17025 (rsq) |
17 |
| |
|
Sphingopyxis alaskensis (sal) |
2 |
| |
|
Shewanella amazonensis (saz) |
2 |
| |
|
Shewanella baltica OS185 (sbm) |
1 |
| |
|
Shewanella baltica OS195 (sbn) |
1 |
| |
|
Sorangium cellulosum (scl) |
6 |
| |
|
Saccharophagus degradans (sde) |
1 |
| |
|
Shewanella denitrificans (sdn) |
1 |
| |
|
Syntrophobacter fumaroxidans (sfu) |
5 |
| |
|
Shewanella sp. MR-4 (she) |
1 |
| |
|
Shewanella sp. MR-7 (shm) |
2 |
| |
|
Shewanella sp. ANA-3 (shn) |
2 |
| |
|
Silicibacter pomeroyi (sil) |
11 |
| |
|
Silicibacter sp. TM1040 (sit) |
6 |
| |
|
Sinorhizobium medicae (smd) |
5 |
| |
|
Sinorhizobium meliloti (sme) |
10 |
| |
|
Shewanella putrefaciens (spc) |
1 |
| |
|
Serratia proteamaculans (spe) |
2 |
| |
|
Salmonella enterica serovar Paratyphi B (spq) |
1 |
| |
|
Sphingomonas wittichii (swi) |
8 |
| |
|
Thiobacillus denitrificans (tbd) |
3 |
| |
|
Thiomicrospira crunogena (tcx) |
2 |
| |
|
Verminephrobacter eiseniae (vei) |
4 |
| |
|
Vibrio vulnificus YJ016 (vvy) |
1 |
| |
|
Xanthomonas axonopodis (xac) |
2 |
| |
|
Xanthobacter autotrophicus (xau) |
83 |
| |
|
Xanthomonas campestris pv. vesicatoria (xcv) |
5 |
| |
|
Xylella fastidiosa 9a5c (xfa) |
1 |
| Eukaryotes |
|
|
10 |
| |
Animals |
|
3 |
| |
|
Gallus gallus (chicken) (gga) |
1 |
| |
|
Nematostella vectensis (sea anemone) (nve) |
1 |
| |
|
Rattus norvegicus (rat) (rno) |
1 |
| |
Fungi |
|
1 |
| |
|
Aspergillus niger (ang) |
1 |
| |
Plants |
|
3 |
| |
|
Ostreococcus lucimarinus (olu) |
2 |
| |
|
Oryza sativa japonica (Japanese rice) (osa) |
1 |
| |
Protists |
|
3 |
| |
|
Cryptosporidium parvum (cpv) |
1 |
| |
|
Plasmodium falciparum (pfa) |
1 |
| |
|
Trypanosoma brucei (tbr) |
1 |
| NULL |
|
|
204 |
| TOTAL |
|
|
4401 |
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