| Kingdom |
Category |
Genus/Species |
Count |
|
|
|
21 |
| Archaea |
|
|
21 |
| |
|
|
21 |
| |
Crenarchaeota |
|
4 |
| |
|
Metallosphaera sedula (mse) |
1 |
| |
|
Nitrosopumilus maritimus (nmr) |
1 |
| |
|
Pyrobaculum arsenaticum (pas) |
1 |
| |
|
Thermofilum pendens (tpe) |
1 |
| |
Euryarchaeota |
|
17 |
| |
|
Archaeoglobus fulgidus (afu) |
1 |
| |
|
Haloarcula marismortui (hma) |
1 |
| |
|
Methanosarcina acetivorans (mac) |
1 |
| |
|
Candidatus Methanoregula boonei (mbn) |
3 |
| |
|
Methanoculleus marisnigri (mem) |
1 |
| |
|
Methanospirillum hungatei (mhu) |
2 |
| |
|
Methanococcus jannaschii (mja) |
1 |
| |
|
Methanosarcina mazei (mma) |
1 |
| |
|
Methanobrevibacter smithii ATCC 35061 (msi) |
1 |
| |
|
Methanosaeta thermophila (mtp) |
1 |
| |
|
Natronomonas pharaonis (nph) |
1 |
| |
|
Pyrococcus horikoshii (pho) |
1 |
| |
|
Uncultured methanogenic archaeon RC-I (rci) |
1 |
| |
|
Thermoplasma acidophilum (tac) |
1 |
| Bacteria |
|
|
4554 |
| |
Acidobacteria |
|
13 |
| |
|
Acidobacteria bacterium (aba) |
2 |
| |
|
Solibacter usitatus (sus) |
11 |
| |
Actinobacteria |
|
34 |
| |
|
Arthrobacter sp. FB24 (art) |
2 |
| |
|
Frankia sp. CcI3 (fra) |
2 |
| |
|
Frankia sp. EAN1pec (fre) |
6 |
| |
|
Kineococcus radiotolerans (kra) |
3 |
| |
|
Mycobacterium avium 104 (mav) |
2 |
| |
|
Mycobacterium gilvum (mgi) |
2 |
| |
|
Mycobacterium sp. KMS (mkm) |
1 |
| |
|
Mycobacterium avium paratuberculosis (mpa) |
1 |
| |
|
Mycobacterium smegmatis (msm) |
3 |
| |
|
Mycobacterium vanbaalenii (mva) |
2 |
| |
|
Rhodococcus sp. RHA1 (rha) |
2 |
| |
|
Rubrobacter xylanophilus (rxy) |
1 |
| |
|
Streptomyces coelicolor (sco) |
1 |
| |
|
Saccharopolyspora erythraea (sen) |
2 |
| |
|
Streptomyces avermitilis (sma) |
2 |
| |
|
Salinispora tropica (stp) |
1 |
| |
|
Thermobifida fusca (tfu) |
1 |
| |
Bacteroides |
|
7 |
| |
|
Cytophaga hutchinsonii (chu) |
1 |
| |
|
Flavobacterium johnsoniae (fjo) |
2 |
| |
|
Flavobacterium psychrophilum (fps) |
1 |
| |
|
Parabacteroides distasonis (pdi) |
1 |
| |
|
Porphyromonas gingivalis (pgi) |
1 |
| |
|
Salinibacter ruber (sru) |
1 |
| |
Cyanobacteria |
|
29 |
| |
|
Acaryochloris marina (amr) |
4 |
| |
|
Anabaena sp. PCC7120 (ana) |
1 |
| |
|
Anabaena variabilis (ava) |
5 |
| |
|
Cyanobacteria Yellowstone A-Prime (cya) |
2 |
| |
|
Cyanobacteria Yellowstone B-Prime (cyb) |
1 |
| |
|
Gloeobacter violaceus (gvi) |
13 |
| |
|
Synechococcus elongatus PCC7942 (syf) |
1 |
| |
|
Synechococcus sp. WH7803 (syx) |
1 |
| |
|
Thermosynechococcus elongatus (tel) |
1 |
| |
Deinococcus-Thermus |
|
5 |
| |
|
Thermus thermophilus HB27 (tth) |
3 |
| |
|
Thermus thermophilus HB8 (ttj) |
2 |
| |
Firmicutes |
|
39 |
| |
|
Alkaliphilus metalliredigens (amt) |
1 |
| |
|
Alkaliphilus oremlandii (aoe) |
1 |
| |
|
Bacillus anthracis Sterne (bat) |
1 |
| |
|
Bacillus amyloliquefaciens (bay) |
1 |
| |
|
Bacillus cereus ATCC 10987 (bca) |
1 |
| |
|
Bacillus licheniformis DSM13 (bld) |
1 |
| |
|
Clostridium acetobutylicum (cac) |
1 |
| |
|
Clostridium beijerinckii (cbe) |
2 |
| |
|
Carboxydothermus hydrogenoformans (chy) |
2 |
| |
|
Clostridium kluyveri (ckl) |
1 |
| |
|
Clostridium phytofermentans (cpy) |
1 |
| |
|
Caldicellulosiruptor saccharolyticus (csc) |
3 |
| |
|
Desulfotomaculum reducens (drm) |
2 |
| |
|
Desulfitobacterium hafniense (dsy) |
2 |
| |
|
Geobacillus kaustophilus (gka) |
1 |
| |
|
Geobacillus thermodenitrificans (gtn) |
1 |
| |
|
Moorella thermoacetica (mta) |
6 |
| |
|
Pelotomaculum thermopropionicum (pth) |
4 |
| |
|
Staphylococcus aureus MSSA476 (sas) |
1 |
| |
|
Streptococcus pneumoniae TIGR4 (spn) |
1 |
| |
|
Symbiobacterium thermophilum (sth) |
3 |
| |
|
Syntrophomonas wolfei (swo) |
2 |
| |
Green nonsulfur bacteria |
|
11 |
| |
|
Chloroflexus aurantiacus (cau) |
2 |
| |
|
Dehalococcoides ethenogenes (det) |
1 |
| |
|
Herpetosiphon aurantiacus (hau) |
2 |
| |
|
Roseiflexus castenholzii DSM13941 (rca) |
2 |
| |
|
Roseiflexus sp. RS-1 (rrs) |
4 |
| |
Green sulfur bacteria |
|
4 |
| |
|
Chlorobium phaeobacteroides (cph) |
4 |
| |
Hyperthermophilic bacteria |
|
1 |
| |
|
Fervidobacterium nodosum (fno) |
1 |
| |
Planctomyces |
|
1 |
| |
|
Rhodopirellula baltica (rba) |
1 |
| |
Proteobacteria |
|
4409 |
| |
|
Acidovorax avenae (aav) |
7 |
| |
|
Acidiphilium cryptum JF-5 (acr) |
12 |
| |
|
Anaeromyxobacter dehalogenans (ade) |
1 |
| |
|
Alkalilimnicola ehrlichei (aeh) |
4 |
| |
|
Aeromonas hydrophila (aha) |
1 |
| |
|
Acidovorax sp. JS42 (ajs) |
1 |
| |
|
Aeromonas salmonicida (asa) |
2 |
| |
|
Agrobacterium tumefaciens C58 (Cereon) (atc) |
16 |
| |
|
Azorhizobium caulinodans (azc) |
67 |
| |
|
Azoarcus sp. BH72 (azo) |
7 |
| |
|
Burkholderia cepacia (bam) |
6 |
| |
|
Bdellovibrio bacteriovorus (bba) |
1 |
| |
|
Bordetella bronchiseptica (bbr) |
13 |
| |
|
Bradyrhizobium sp. BTAi1 (bbt) |
611 |
| |
|
Burkholderia cenocepacia HI2424 (bch) |
5 |
| |
|
Brucella canis (bcs) |
6 |
| |
|
Bartonella henselae (bhe) |
2 |
| |
|
Bradyrhizobium japonicum (bja) |
1100 |
| |
|
Burkholderia mallei NCTC 10247 (bmn) |
1 |
| |
|
Brucella suis ATCC 23445 (bmt) |
2 |
| |
|
Burkholderia multivorans (bmu) |
2 |
| |
|
Brucella ovis (bov) |
4 |
| |
|
Bordetella parapertussis (bpa) |
3 |
| |
|
Burkholderia pseudomallei 668 (bpd) |
4 |
| |
|
Bordetella pertussis (bpe) |
1 |
| |
|
Burkholderia pseudomallei 1106a (bpl) |
1 |
| |
|
Bordetella petrii (bpt) |
12 |
| |
|
Bradyrhizobium sp. ORS278 (bra) |
464 |
| |
|
Burkholderia thailandensis (bte) |
4 |
| |
|
Bartonella tribocorum (btr) |
2 |
| |
|
Burkholderia sp. 383 (bur) |
9 |
| |
|
Burkholderia vietnamiensis (bvi) |
3 |
| |
|
Burkholderia xenovorans (bxe) |
23 |
| |
|
Coxiella burnetii Dugway 7E9-12 (cbd) |
1 |
| |
|
Coxiella burnetii RSA 331 (cbs) |
1 |
| |
|
Caulobacter crescentus (ccr) |
11 |
| |
|
Colwellia psychrerythraea (cps) |
1 |
| |
|
Chromohalobacter salexigens (csa) |
2 |
| |
|
Chromobacterium violaceum (cvi) |
2 |
| |
|
Delftia acidovorans (dac) |
8 |
| |
|
Dechloromonas aromatica (dar) |
6 |
| |
|
Dichelobacter nodosus (dno) |
1 |
| |
|
Candidatus Desulfococcus oleovorans (dol) |
2 |
| |
|
Desulfotalea psychrophila (dps) |
1 |
| |
|
Dinoroseobacter shibae (dsh) |
14 |
| |
|
Azoarcus sp. EbN1 (eba) |
16 |
| |
|
Erwinia carotovora (eca) |
3 |
| |
|
Escherichia coli CFT073 (UPEC) (ecc) |
1 |
| |
|
Escherichia coli K-12 W3110 (ecj) |
1 |
| |
|
Escherichia coli O157 Sakai (EHEC) (ecs) |
2 |
| |
|
Escherichia coli APEC O1 (ecv) |
2 |
| |
|
Escherichia coli HS (ecx) |
3 |
| |
|
Enterobacter sakazakii (esa) |
3 |
| |
|
Francisella tularensis subsp. novicida U112 (ftn) |
1 |
| |
|
Granulobacter bethesdensis (gbe) |
8 |
| |
|
Gluconacetobacter diazotrophicus (gdi) |
18 |
| |
|
Geobacter metallireducens (gme) |
4 |
| |
|
Gluconobacter oxydans (gox) |
1 |
| |
|
Geobacter sulfurreducens (gsu) |
2 |
| |
|
Geobacter uraniumreducens (gur) |
2 |
| |
|
Herminiimonas arsenicoxydans (har) |
4 |
| |
|
Hahella chejuensis (hch) |
5 |
| |
|
Halorhodospira halophila (hha) |
16 |
| |
|
Hyphomonas neptunium (hne) |
3 |
| |
|
Helicobacter pylori 26695 (hpy) |
1 |
| |
|
Idiomarina loihiensis (ilo) |
1 |
| |
|
Jannaschia sp. CCS1 (jan) |
6 |
| |
|
Legionella pneumophila Lens (lpf) |
1 |
| |
|
Magnetospirillum magneticum (mag) |
35 |
| |
|
Marinobacter aquaeolei (maq) |
2 |
| |
|
Methylococcus capsulatus (mca) |
6 |
| |
|
Mesorhizobium sp. BNC1 (mes) |
28 |
| |
|
Methylobacterium extorquens (mex) |
66 |
| |
|
Magnetococcus sp. MC-1 (mgm) |
4 |
| |
|
Mesorhizobium loti (mlo) |
41 |
| |
|
Minibacterium massiliensis (mms) |
5 |
| |
|
Marinomonas sp. MWYL1 (mmw) |
2 |
| |
|
Methylibium petroleiphilum (mpt) |
5 |
| |
|
Myxococcus xanthus (mxa) |
7 |
| |
|
Novosphingobium aromaticivorans (nar) |
5 |
| |
|
Nitrosomonas eutropha (net) |
1 |
| |
|
Nitrosomonas europaea (neu) |
2 |
| |
|
Nitrobacter hamburgensis (nha) |
786 |
| |
|
Neisseria meningitidis 053442 (nmn) |
2 |
| |
|
Nitrosospira multiformis (nmu) |
5 |
| |
|
Nitrosococcus oceani (noc) |
5 |
| |
|
Nitrobacter winogradskyi (nwi) |
233 |
| |
|
Ochrobactrum anthropi (oan) |
10 |
| |
|
Pseudomonas aeruginosa PAO1 (pae) |
9 |
| |
|
Pseudomonas aeruginosa PA7 (pap) |
6 |
| |
|
Psychrobacter arcticum (par) |
1 |
| |
|
Pseudomonas aeruginosa UCBPP-PA14 (pau) |
3 |
| |
|
Pelobacter carbinolicus (pca) |
5 |
| |
|
Paracoccus denitrificans (pde) |
20 |
| |
|
Pseudomonas entomophila (pen) |
2 |
| |
|
Pseudomonas fluorescens Pf-5 (pfl) |
3 |
| |
|
Pseudomonas fluorescens PfO-1 (pfo) |
3 |
| |
|
Psychromonas ingrahamii (pin) |
2 |
| |
|
Parvibaculum lavamentivorans (pla) |
18 |
| |
|
Photorhabdus luminescens (plu) |
2 |
| |
|
Pseudomonas mendocina (pmy) |
2 |
| |
|
Polaromonas naphthalenivorans (pna) |
13 |
| |
|
Polynucleobacter sp. QLW-P1DMWA-1 (pnu) |
2 |
| |
|
Polaromonas sp. JS666 (pol) |
8 |
| |
|
Pelobacter propionicus (ppd) |
2 |
| |
|
Pseudomonas putida F1 (ppf) |
2 |
| |
|
Pseudomonas putida KT2440 (ppu) |
1 |
| |
|
Pseudomonas stutzeri (psa) |
4 |
| |
|
Pseudomonas syringae pv. syringae B728a (psb) |
3 |
| |
|
Pseudomonas syringae pv. phaseolicola 1448A (psp) |
1 |
| |
|
Pseudomonas syringae pv. tomato DC3000 (pst) |
1 |
| |
|
Roseobacter denitrificans (rde) |
5 |
| |
|
Ralstonia eutropha H16 (reh) |
8 |
| |
|
Rhizobium etli (ret) |
21 |
| |
|
Ralstonia eutropha JMP134 (reu) |
5 |
| |
|
Rickettsia felis (rfe) |
1 |
| |
|
Rhodoferax ferrireducens (rfr) |
11 |
| |
|
Rhizobium leguminosarum (rle) |
29 |
| |
|
Ralstonia metallidurans (rme) |
3 |
| |
|
Rickettsia prowazekii (rpr) |
1 |
| |
|
Rhodospirillum rubrum (rru) |
150 |
| |
|
Rhodobacter sphaeroides ATCC 17029 (rsh) |
10 |
| |
|
Ralstonia solanacearum (rso) |
15 |
| |
|
Rhodobacter sphaeroides 2.4.1 (rsp) |
6 |
| |
|
Rhodobacter sphaeroides ATCC 17025 (rsq) |
21 |
| |
|
Sphingopyxis alaskensis (sal) |
3 |
| |
|
Syntrophus aciditrophicus (sat) |
3 |
| |
|
Shewanella amazonensis (saz) |
2 |
| |
|
Shewanella baltica OS155 (sbl) |
1 |
| |
|
Sorangium cellulosum (scl) |
14 |
| |
|
Saccharophagus degradans (sde) |
2 |
| |
|
Shewanella denitrificans (sdn) |
2 |
| |
|
Salmonella enterica serovar Choleraesuis (sec) |
3 |
| |
|
Syntrophobacter fumaroxidans (sfu) |
4 |
| |
|
Shewanella sp. MR-4 (she) |
1 |
| |
|
Shewanella sp. W3-18-1 (shw) |
1 |
| |
|
Silicibacter pomeroyi (sil) |
5 |
| |
|
Silicibacter sp. TM1040 (sit) |
6 |
| |
|
Sinorhizobium medicae (smd) |
1 |
| |
|
Sinorhizobium meliloti (sme) |
13 |
| |
|
Serratia proteamaculans (spe) |
2 |
| |
|
Salmonella enterica serovar Paratyphi B (spq) |
1 |
| |
|
Shewanella sediminis (sse) |
1 |
| |
|
Shigella sonnei (ssn) |
1 |
| |
|
Salmonella typhimurium LT2 (stm) |
1 |
| |
|
Sulfurovum sp. NBC37-1 (sun) |
1 |
| |
|
Sphingomonas wittichii (swi) |
14 |
| |
|
Thiobacillus denitrificans (tbd) |
3 |
| |
|
Thiomicrospira crunogena (tcx) |
1 |
| |
|
Verminephrobacter eiseniae (vei) |
6 |
| |
|
Vibrio harveyi (vha) |
1 |
| |
|
Vibrio vulnificus CMCP6 (vvu) |
1 |
| |
|
Vibrio vulnificus YJ016 (vvy) |
2 |
| |
|
Xanthomonas axonopodis (xac) |
2 |
| |
|
Xanthobacter autotrophicus (xau) |
89 |
| |
|
Xanthomonas campestris pv. campestris 8004 (xcb) |
1 |
| |
|
Xanthomonas campestris pv. vesicatoria (xcv) |
3 |
| |
|
Xylella fastidiosa Temecula1 (xft) |
1 |
| |
|
Xanthomonas oryzae MAFF311018 (xom) |
2 |
| |
|
Yersinia enterocolitica (yen) |
11 |
| |
|
Zymomonas mobilis (zmo) |
4 |
| |
Spirochete |
|
1 |
| |
|
Treponema denticola (tde) |
1 |
| Eukaryotes |
|
|
10 |
| |
Animals |
|
3 |
| |
|
Nematostella vectensis (sea anemone) (nve) |
3 |
| |
Fungi |
|
6 |
| |
|
Aspergillus niger (ang) |
1 |
| |
|
Aspergillus oryzae (aor) |
1 |
| |
|
Fusarium graminearum (fgr) |
2 |
| |
|
Magnaporthe grisea (mgr) |
1 |
| |
|
Yarrowia lipolytica (yli) |
1 |
| |
Protists |
|
1 |
| |
|
Dictyostelium discoideum (ddi) |
1 |
| NULL |
|
|
280 |
| TOTAL |
|
|
4886 |
![[space]](http://homer.ornl.gov/compbio/public/images/bluespacer.gif){kind=small}
![[space]](http://maple.lsd.ornl.gov/common/images/bluespacer.gif){kind=small}