Top 20 Categories

Top 20 InterPro

191	NULL	NULL
155	IPR003593	AAA+ ATPase, core
110	IPR003439	ABC transporter related
87	IPR001789	Response regulator receiver
72	IPR003594	ATP-binding region, ATPase-like
63	IPR005467	Histidine kinase
56	IPR003660	Histidine kinase, HAMP region
55	IPR004358	Histidine kinase related protein, C-terminal
52	IPR002198	Short-chain dehydrogenase/reductase SDR
49	IPR003661	Histidine kinase A, N-terminal
45	IPR011701	Major facilitator superfamily MFS_1
44	IPR002347	Glucose/ribitol dehydrogenase
41	IPR004089	Bacterial chemotaxis sensory transducer
41	IPR000515	Binding-protein-dependent transport systems inner membrane component
39	IPR007114	Major facilitator superfamily
38	IPR000014	PAS
37	IPR000847	Bacterial regulatory protein, LysR
34	IPR013216	Methyltransferase type 11
34	IPR005119	LysR, substrate-binding
33	IPR006311	Twin-arginine translocation pathway signal

Top 20 HMMPfam

106	PF00005	ABC_tran
82	PF00072	Response_reg
72	PF02518	HATPase_c
55	PF00672	HAMP
52	PF00106	adh_short
49	PF00512	HisKA
45	PF07690	MFS_1
41	PF00528	BPD_transp_1
40	PF00015	MCPsignal
37	PF00126	HTH_1
34	PF08241	Methyltransf_11
34	PF03466	LysR_substrate
32	PF04055	Radical_SAM
31	PF00501	AMP-binding
30	PF08659	KR
30	PF08242	Methyltransf_12
29	PF08448	PAS_4
28	PF02653	BPD_transp_2
28	PF00990	GGDEF
26	PF00561	Abhydrolase_1

Top 20 HMMTigr

33	TIGR01409	TAT_signal_seq
32	TIGR00229	sensory_box
28	TIGR00254	GGDEF
21	TIGR01730	RND_mfp
11	TIGR02937	sigma70-ECF
11	TIGR00231	small_GTP
9	TIGR01930	AcCoA-C-Actrans
8	TIGR01733	AA-adenyl-dom
7	TIGR02607	antidote_HigA
7	TIGR01509	HAD-SF-IA-v3
6	TIGR01494	ATPase_P-type
6	TIGR00915	2A0602
6	TIGR00016	ackA
5	TIGR02429	pcaI_scoA_fam
5	TIGR02283	MltB_2
5	TIGR01845	outer_NodT
5	TIGR01552	phd_fam
5	TIGR01549	HAD-SF-IA-v1
5	TIGR00369	unchar_dom_1
4	TIGR02492	flgK_ends

Top 20 ProfileScan

106	PS50893	ABC_TRANSPORTER_2
86	PS50110	RESPONSE_REGULATORY
63	PS50109	HIS_KIN
61	PS00013	PROKAR_LIPOPROTEIN
54	PS50885	HAMP
41	PS50928	ABC_TM1
41	PS50111	CHEMOTAXIS_TRANSDUC_2
39	PS50850	MFS
34	PS50931	HTH_LYSR
29	PS50112	PAS
28	PS50887	GGDEF
27	PS50977	HTH_TETR_2
26	PS50192	T_SNARE
22	PS51186	GNAT
22	PS50113	PAC
16	PS51192	HELICASE_ATP_BIND_1
16	PS50943	HTH_CROC1
16	PS01124	HTH_ARAC_FAMILY_2
15	PS50929	ABC_TM1F
15	PS50883	EAL

Top 20 FPrintScan

55	PR00344	BCTRLSENSOR
44	PR00081	GDHRDH
31	PR00080	SDRFAMILY
30	PR00154	AMPBINDING
24	PR00368	FADPNR
24	PR00039	HTHLYSR
22	PR01590	HTHFIS
22	PR00455	HTHTETR
20	PR00411	PNDRDTASEI
19	PR00702	ACRIFLAVINRP
19	PR00260	CHEMTRNSDUCR
18	PR00353	4FE4SFRDOXIN
16	PR01167	INSADHFAMILY
15	PR00469	PNDRDTASEII
14	PR00111	ABHYDROLASE
14	PR00032	HTHARAC
13	PR00420	RNGMNOXGNASE
9	PR01437	NUOXDRDTASE4
9	PR00502	NUDIXFAMILY
9	PR00419	ADXRDTASE

Top 20 BlastProDom

97	PD000006	sp_Q6N0F3_RHOPA_Q6N0F3;
85	PD000039	sp_Q89VL6_BRAJA_Q89VL6;
20	PD000329	sp_Q6LQ51_PHOPR_Q6LQ51;
12	PD000139	sp_Q9AB89_CAUCR_Q9AB89;
9	PD000316	sp_Q89NY8_BRAJA_Q89NY8;
9	PD000307	sp_Q98BC5_RHILO_Q98BC5;
7	PD186071	sp_Q89PE7_BRAJA_Q89PE7;
7	PD000930	sp_Q6ND96_RHOPA_Q6ND96;
6	PD000288	sp_Q82BR7_STRAW_Q82BR7;
5	PD023420	sp_Q7VC05_PROMA_Q7VC05;
5	PD002691	sp_ILD2_BRAJA_Q89KY5;
5	PD001979	sp_LHB1_RHOGE_P51757;
5	PD001895	sp_Q6NC95_RHOPA_Q6NC95;
5	PD001859	sp_Q8FJW9_ECOL6_Q8FJW9;
5	PD001777	sp_Q6NAB8_RHOPA_Q6NAB8;
5	PD000739	sp_Q89HH0_BRAJA_Q89HH0;
5	PD000621	sp_Q6NAL1_RHOPA_Q6NAL1;
4	PD139017	sp_Q6N9M8_RHOPA_Q6N9M8;
4	PD043187	sp_Q989Z4_RHILO_Q989Z4;
4	PD004960	sp_NIRT_PSEST_P24038;

Top 20 COGs

220	COG1120	ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components
216	COG1124	ABC-type dipeptide/oligopeptide/nickel transport system ATPase component
214	COG4988	ABC-type transport system involved in cytochrome bd biosynthesis ATPase and permease components
214	COG4555	ABC-type Na+ transport system ATPase component
212	COG4987	ABC-type transport system involved in cytochrome bd biosynthesis fused ATPase and permease components
212	COG0444	ABC-type dipeptide/oligopeptide/nickel transport system ATPase component
210	COG1134	ABC-type polysaccharide/polyol phosphate transport system ATPase component
206	COG4615	ABC-type siderophore export system fused ATPase and permease components
170	COG2197	Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
170	COG0745	Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
162	COG3437	Response regulator containing a CheY-like receiver domain and an HD-GYP domain
154	COG4565	Response regulator of citrate/malate metabolism
142	COG3279	Response regulator of the LytR/AlgR family
136	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
130	COG2201	Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
115	COG1245	Predicted ATPase RNase L inhibitor (RLI) homolog
110	COG1136	ABC-type antimicrobial peptide transport system ATPase component
109	COG3839	ABC-type sugar transport systems ATPase components
109	COG2274	ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain
109	COG1131	ABC-type multidrug transport system ATPase component

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