Top 20 Categories

Top 20 InterPro

254	NULL	NULL
138	IPR003593	AAA+ ATPase, core
98	IPR003439	ABC transporter related
87	IPR001789	Response regulator receiver
69	IPR003594	ATP-binding region, ATPase-like
63	IPR003660	Histidine kinase, HAMP region
57	IPR005467	Histidine kinase
57	IPR004358	Histidine kinase related protein, C-terminal
52	IPR002198	Short-chain dehydrogenase/reductase SDR
48	IPR003661	Histidine kinase A, N-terminal
44	IPR006311	Twin-arginine translocation pathway signal
44	IPR000014	PAS
42	IPR004089	Bacterial chemotaxis sensory transducer
42	IPR002347	Glucose/ribitol dehydrogenase
36	IPR000160	GGDEF
34	IPR001509	NAD-dependent epimerase/dehydratase
33	IPR000515	Binding-protein-dependent transport systems inner membrane component
31	IPR000182	GCN5-related N-acetyltransferase
30	IPR013216	Methyltransferase type 11
30	IPR001851	Bacterial inner-membrane translocator

Top 20 HMMPfam

94	PF00005	ABC_tran
83	PF00072	Response_reg
69	PF02518	HATPase_c
61	PF00672	HAMP
50	PF00106	adh_short
48	PF00512	HisKA
42	PF00015	MCPsignal
36	PF00990	GGDEF
34	PF01370	Epimerase
33	PF00528	BPD_transp_1
30	PF08241	Methyltransf_11
30	PF02653	BPD_transp_2
29	PF08242	Methyltransf_12
29	PF07690	MFS_1
29	PF00583	Acetyltransf_1
28	PF00501	AMP-binding
27	PF08659	KR
27	PF00561	Abhydrolase_1
26	PF08448	PAS_4
25	PF04055	Radical_SAM

Top 20 HMMTigr

44	TIGR01409	TAT_signal_seq
36	TIGR00254	GGDEF
36	TIGR00229	sensory_box
21	TIGR02937	sigma70-ECF
13	TIGR01730	RND_mfp
13	TIGR00231	small_GTP
8	TIGR01901	adhes_NPXG
8	TIGR01509	HAD-SF-IA-v3
7	TIGR01444	fkbM_fam
6	TIGR01930	AcCoA-C-Actrans
6	TIGR01552	phd_fam
5	TIGR02283	MltB_2
5	TIGR01494	ATPase_P-type
5	TIGR01352	tonB_Cterm
4	TIGR03026	NDP-sugDHase
4	TIGR01097	PhnE
4	TIGR00969	3a0106s02
4	TIGR00650	MG442
4	TIGR00369	unchar_dom_1
4	TIGR00125	cyt_tran_rel

Top 20 ProfileScan

94	PS50893	ABC_TRANSPORTER_2
85	PS50110	RESPONSE_REGULATORY
62	PS50885	HAMP
57	PS50109	HIS_KIN
57	PS00013	PROKAR_LIPOPROTEIN
42	PS50111	CHEMOTAXIS_TRANSDUC_2
36	PS50887	GGDEF
33	PS50928	ABC_TM1
30	PS50112	PAS
28	PS50192	T_SNARE
26	PS51186	GNAT
26	PS50113	PAC
23	PS50850	MFS
21	PS50883	EAL
20	PS51192	HELICASE_ATP_BIND_1
19	PS51007	CYTC
19	PS50977	HTH_TETR_2
19	PS50293	TPR_REGION
18	PS50943	HTH_CROC1
16	PS50975	ATP_GRASP

Top 20 FPrintScan

57	PR00344	BCTRLSENSOR
42	PR00081	GDHRDH
33	PR00080	SDRFAMILY
27	PR00368	FADPNR
26	PR00154	AMPBINDING
25	PR00260	CHEMTRNSDUCR
18	PR00469	PNDRDTASEII
17	PR01590	HTHFIS
17	PR00455	HTHTETR
17	PR00411	PNDRDTASEI
16	PR01167	INSADHFAMILY
16	PR00420	RNGMNOXGNASE
16	PR00111	ABHYDROLASE
14	PR00702	ACRIFLAVINRP
14	PR00038	HTHLUXR
13	PR00039	HTHLYSR
12	PR00353	4FE4SFRDOXIN
11	PR00419	ADXRDTASE
9	PR00673	LIGHTHARVSTA
9	PR00502	NUDIXFAMILY

Top 20 BlastProDom

89	PD000006	sp_Q89Y65_BRAJA_Q89Y65;
84	PD000039	sp_Q6NCH8_RHOPA_Q6NCH8;
18	PD000329	sp_Q89WQ8_BRAJA_Q89WQ8;
15	PD000307	sp_Q6N5G4_RHOPA_Q6N5G4;
14	PD000139	sp_Q9AB89_CAUCR_Q9AB89;
10	PD000930	sp_Q6ND96_RHOPA_Q6ND96;
8	PD001979	sp_LHB1_RHOGE_P51757;
7	PD000316	sp_Q89NY8_BRAJA_Q89NY8;
6	PD000945	sp_Q89WE8_BRAJA_Q89WE8;
6	PD000621	sp_Q6NAL1_RHOPA_Q6NAL1;
5	PD186071	sp_P95635_BBBBB_P95635;
5	PD139017	sp_Q6NAP3_RHOPA_Q6NAP3;
5	PD020774	sp_Q6NAY4_RHOPA_Q6NAY4;
5	PD003142	sp_CHEA_RHOSH_Q53135;
5	PD002003	sp_Q6NCF5_RHOPA_Q6NCF5;
5	PD001895	sp_Q6NCE7_RHOPA_Q6NCE7;
5	PD001777	sp_Q6NAB8_RHOPA_Q6NAB8;
4	PD060431	sp_Q7NHK1_GLOVI_Q7NHK1;
4	PD023420	sp_Q89CR5_BRAJA_Q89CR5;
4	PD005328	sp_CHEB_BORPE_Q7VZ94;

Top 20 COGs

192	COG4988	ABC-type transport system involved in cytochrome bd biosynthesis ATPase and permease components
188	COG4987	ABC-type transport system involved in cytochrome bd biosynthesis fused ATPase and permease components
188	COG4555	ABC-type Na+ transport system ATPase component
188	COG1124	ABC-type dipeptide/oligopeptide/nickel transport system ATPase component
188	COG1120	ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components
188	COG0444	ABC-type dipeptide/oligopeptide/nickel transport system ATPase component
186	COG1134	ABC-type polysaccharide/polyol phosphate transport system ATPase component
184	COG4615	ABC-type siderophore export system fused ATPase and permease components
182	COG2197	Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
168	COG0745	Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
160	COG3437	Response regulator containing a CheY-like receiver domain and an HD-GYP domain
146	COG4565	Response regulator of citrate/malate metabolism
142	COG3279	Response regulator of the LytR/AlgR family
130	COG2201	Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
126	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
112	COG3706	Response regulator containing a CheY-like receiver domain and a GGDEF domain
104	COG1028	Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)
104	COG0840	Methyl-accepting chemotaxis protein
102	COG0451	Nucleoside-diphosphate-sugar epimerase
98	COG1245	Predicted ATPase RNase L inhibitor (RLI) homolog

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