Summary of the tRNAs found by tRNAscan-se
| Amino Acid | Count |
|---|
| Ala | 4 |
| Arg | 5 |
| Asn | 1 |
| Asp | 1 |
| Cys | 1 |
| Gln | 2 |
| Glu | 2 |
| Gly | 3 |
| His | 1 |
| Ile | 2 |
| Leu | 5 |
| Lys | 2 |
| Met | 3 |
| Phe | 1 |
| Pro | 3 |
| Pseudo | 0 |
| Ser | 4 |
| Thr | 3 |
| Trp | 1 |
| Tyr | 1 |
| Undet | 1 |
| Val | 3 |
List of tRNAs found by tRNAscan-se
| Amino Acid | Anticodon | Contig | tRNA | tRNA Location | Intron Location | Cove Score | HMM Score |
|---|
| Ala | CGC | BX571963 | 4 | 458356 ..458431 | 0..0 | 85.83 | 70.28 |
| Ala | GGC | BX571963 | 49 | 66585 ..66510 | 0..0 | 87.23 | 69.29 |
| Ala | TGC | BX571963 | 25 | 5249655..5249580 | 0..0 | 86.35 | 74.13 |
| Ala | TGC | BX571963 | 28 | 4995890..4995815 | 0..0 | 86.35 | 74.13 |
| Arg | ACG | BX571963 | 5 | 702780 ..702856 | 0..0 | 92.98 | 73.98 |
| Arg | CCG | BX571963 | 6 | 858392 ..858468 | 0..0 | 86.37 | 55.76 |
| Arg | CCT | BX571963 | 46 | 526702 ..526626 | 0..0 | 77.28 | 47.85 |
| Arg | TCG | BX571963 | 17 | 3591387..3591463 | 0..0 | 90.16 | 68.68 |
| Arg | TCT | BX571963 | 40 | 2893892..2893816 | 0..0 | 80.78 | 58.74 |
| Asn | GTT | BX571963 | 38 | 2933866..2933792 | 0..0 | 86.74 | 66.13 |
| Asp | GTC | BX571963 | 36 | 3338405..3338329 | 0..0 | 97.02 | 82.50 |
| Cys | GCA | BX571963 | 39 | 2930040..2929967 | 0..0 | 70.06 | 42.02 |
| Gln | CTG | BX571963 | 19 | 3934358..3934431 | 0..0 | 68.86 | 39.93 |
| Gln | TTG | BX571963 | 8 | 1061293..1061367 | 0..0 | 69.86 | 41.15 |
| Glu | CTC | BX571963 | 3 | 399949 ..400023 | 0..0 | 68.86 | 42.27 |
| Glu | TTC | BX571963 | 41 | 2862554..2862480 | 0..0 | 60.15 | 31.71 |
| Gly | CCC | BX571963 | 22 | 5374792..5374719 | 0..0 | 80.62 | 58.67 |
| Gly | GCC | BX571963 | 47 | 295365 ..295291 | 0..0 | 88.17 | 69.67 |
| Gly | TCC | BX571963 | 32 | 3729487..3729414 | 0..0 | 82.33 | 66.40 |
| His | GTG | BX571963 | 29 | 4678955..4678879 | 0..0 | 90.83 | 66.86 |
| Ile | GAT | BX571963 | 24 | 5249765..5249689 | 0..0 | 93.43 | 73.71 |
| Ile | GAT | BX571963 | 27 | 4996000..4995924 | 0..0 | 93.43 | 73.71 |
| Leu | CAA | BX571963 | 45 | 604683 ..604599 | 0..0 | 74.81 | 48.91 |
| Leu | CAG | BX571963 | 1 | 52242 ..52326 | 0..0 | 71.88 | 43.46 |
| Leu | GAG | BX571963 | 34 | 3574740..3574656 | 0..0 | 69.13 | 39.95 |
| Leu | TAA | BX571963 | 30 | 3879854..3879766 | 0..0 | 79.43 | 46.32 |
| Leu | TAG | BX571963 | 35 | 3356522..3356438 | 0..0 | 77.53 | 51.95 |
| Lys | CTT | BX571963 | 13 | 2309175..2309250 | 0..0 | 96.14 | 71.08 |
| Lys | TTT | BX571963 | 37 | 3018528..3018453 | 0..0 | 94.10 | 72.78 |
| Met | CAT | BX571963 | 10 | 1428260..1428336 | 0..0 | 89.01 | 76.46 |
| Met | CAT | BX571963 | 11 | 1824830..1824905 | 0..0 | 86.47 | 64.62 |
| Met | CAT | BX571963 | 12 | 1884001..1884077 | 0..0 | 83.88 | 55.32 |
| Phe | GAA | BX571963 | 26 | 5108016..5107941 | 0..0 | 88.73 | 66.87 |
| Pro | CGG | BX571963 | 9 | 1189709..1189785 | 0..0 | 86.36 | 60.13 |
| Pro | GGG | BX571963 | 15 | 3114233..3114310 | 0..0 | 79.64 | 51.96 |
| Pro | TGG | BX571963 | 14 | 2866851..2866927 | 0..0 | 79.83 | 55.97 |
| Ser | CGA | BX571963 | 48 | 175810 ..175721 | 0..0 | 78.76 | 47.16 |
| Ser | GCT | BX571963 | 42 | 2744972..2744879 | 0..0 | 76.24 | 47.13 |
| Ser | GGA | BX571963 | 23 | 5252419..5252330 | 0..0 | 76.12 | 49.44 |
| Ser | TGA | BX571963 | 43 | 2728568..2728479 | 0..0 | 79.34 | 46.93 |
| Thr | CGT | BX571963 | 2 | 284219 ..284294 | 0..0 | 97.39 | 74.93 |
| Thr | GGT | BX571963 | 21 | 5118650..5118724 | 0..0 | 89.61 | 62.53 |
| Thr | TGT | BX571963 | 18 | 3809553..3809627 | 0..0 | 83.07 | 58.45 |
| Trp | CCA | BX571963 | 33 | 3701639..3701564 | 0..0 | 91.15 | 66.67 |
| Tyr | GTA | BX571963 | 31 | 3807196..3807111 | 0..0 | 74.36 | 42.73 |
| Undet | ??? | BX571963 | 20 | 4608449..4608523 | 0..0 | 32.59 | 16.20 |
| Val | CAC | BX571963 | 44 | 1802563..1802489 | 0..0 | 81.20 | 58.80 |
| Val | GAC | BX571963 | 7 | 1009620..1009694 | 0..0 | 89.95 | 69.24 |
| Val | TAC | BX571963 | 16 | 3345173..3345249 | 0..0 | 92.05 | 64.77 |
tRNA Models
BX571963.trna1 (52242-52326) Length: 85 bp
Type: Leu Anticodon: CAG at 35-37 (52276-52278) Score: 71.88
HMM Sc=43.46 Sec struct Sc=28.42
* | * | * | * | * | * | * | * |
Seq: GCCCAGGTGGCGGAATTGGTaGACGCGCTGGTTTCAGGTACCAGTGGGTAACaCCGTGGAGGTTCGAGTCCTCTCCTGGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>.....<<..>>>>>.......<<<<<<<<<<<<....
BX571963.trna2 (284219-284294) Length: 76 bp
Type: Thr Anticodon: CGT at 34-36 (284252-284254) Score: 97.39
HMM Sc=74.93 Sec struct Sc=22.46
* | * | * | * | * | * | * | *
Seq: GCCGCAATAGCTCAGCTGGTAGAGCACGTCATTCGTAATGACGGGGtCGGGGGTTCGAATCCCTCTTGCGGCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
BX571963.trna3 (399949-400023) Length: 75 bp
Type: Glu Anticodon: CTC at 34-36 (399982-399984) Score: 68.86
HMM Sc=42.27 Sec struct Sc=26.59
* | * | * | * | * | * | * |
Seq: GCTCCCTTCGTCTAGCGGTtAGGACGCGGCCCTCTCAAGGCTGAAACAGGGGTTCGATTCCCCTAGGGAGCGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
BX571963.trna4 (458356-458431) Length: 76 bp
Type: Ala Anticodon: CGC at 34-36 (458389-458391) Score: 85.83
HMM Sc=70.28 Sec struct Sc=15.55
* | * | * | * | * | * | * | *
Seq: GGGGCCATAGCTCAGCTGGGAGAGCGCATCGTTCGCAATGATGAGGtCGGCGGTTCGATCCCGCCTGGCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
BX571963.trna5 (702780-702856) Length: 77 bp
Type: Arg Anticodon: ACG at 35-37 (702814-702816) Score: 92.98
HMM Sc=73.98 Sec struct Sc=19.00
* | * | * | * | * | * | * | *
Seq: GCGCCCGTAGCTCAGCTGGAtAGAGCACCAGACTACGAATCTGGGGGtCAGAGGTTCGAATCCTTTCGGGCGCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
BX571963.trna6 (858392-858468) Length: 77 bp
Type: Arg Anticodon: CCG at 35-37 (858426-858428) Score: 86.37
HMM Sc=55.76 Sec struct Sc=30.61
* | * | * | * | * | * | * | *
Seq: GCACCCGTAGCTCAGCTGGAtAGAGCGTTGCCCTCCGAAGGCAAAGGtCACACGTTCGAATCGTGTCGGGTGCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
BX571963.trna7 (1009620-1009694) Length: 75 bp
Type: Val Anticodon: GAC at 33-35 (1009652-1009654) Score: 89.95
HMM Sc=69.24 Sec struct Sc=20.71
* | * | * | * | * | * | * |
Seq: GGGCGCGTAGCTCAGCGGGAGAGCACCTCGTTGACATCGAGGGGGtCACAGGTTCGATCCCTGTCGCGCCCACCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
BX571963.trna8 (1061293-1061367) Length: 75 bp
Type: Gln Anticodon: TTG at 33-35 (1061325-1061327) Score: 69.86
HMM Sc=41.15 Sec struct Sc=28.71
* | * | * | * | * | * | * |
Seq: TGGGGCGTAGCCAAGCGGTAAGGCAGGGGATTTTGATTCCCCCATgCGGAGGTTCGATCCCTCCCGCCCCAGCCA
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
BX571963.trna9 (1189709-1189785) Length: 77 bp
Type: Pro Anticodon: CGG at 35-37 (1189743-1189745) Score: 86.36
HMM Sc=60.13 Sec struct Sc=26.23
* | * | * | * | * | * | * | *
Seq: CGGAGTGTGGCTCAGCCcGGTAGAGCACTGCGTTCGGGACGCAGGGGtCGCAGGTTCGAATCCTGCCACTCCGACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
BX571963.trna10 (1428260-1428336) Length: 77 bp
Type: Met Anticodon: CAT at 35-37 (1428294-1428296) Score: 89.01
HMM Sc=76.46 Sec struct Sc=12.55
* | * | * | * | * | * | * | *
Seq: GGCGGGGTAGCTCAGCTGGTtAGAGCACGGGAATCATAATCCTGGGGtCGGGGGTTCGAGTCCCTCTCCCGCTACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
BX571963.trna11 (1824830-1824905) Length: 76 bp
Type: Met Anticodon: CAT at 34-36 (1824863-1824865) Score: 86.47
HMM Sc=64.62 Sec struct Sc=21.85
* | * | * | * | * | * | * | *
Seq: GGGCCTGTAGCTCAATGGTtAGAGCCGACCGCTCATAACGGTCTGGtTGCAGGTTCGAGTCCTGCCGGGCCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
BX571963.trna12 (1884001-1884077) Length: 77 bp
Type: Met Anticodon: CAT at 35-37 (1884035-1884037) Score: 83.88
HMM Sc=55.32 Sec struct Sc=28.56
* | * | * | * | * | * | * | *
Seq: CGCGGGGTGGAGCAGCCcGGTAGCTCGTCAGGCTCATAACCTGAAGGtCATAGGTTCAAATCCTATCCCCGCAACCA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....
BX571963.trna13 (2309175-2309250) Length: 76 bp
Type: Lys Anticodon: CTT at 34-36 (2309208-2309210) Score: 96.14
HMM Sc=71.08 Sec struct Sc=25.06
* | * | * | * | * | * | * | *
Seq: GGGCGCATAGCTCAGTTGGTAGAGCAGCTGACTCTTAATCAGCGGGtCCTAGGTTCGAGCCCTAGTGCGCCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
BX571963.trna14 (2866851-2866927) Length: 77 bp
Type: Pro Anticodon: TGG at 35-37 (2866885-2866887) Score: 79.83
HMM Sc=55.97 Sec struct Sc=23.86
* | * | * | * | * | * | * | *
Seq: CGGGGTATAGCGCAGCCtGGTAGCGCGGCAGTTTTGGGTACTGCAGGtCGTTGGTTCGAATCCAGCTGCCCCGACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
BX571963.trna15 (3114233-3114310) Length: 78 bp
Type: Pro Anticodon: GGG at 36-38 (3114268-3114270) Score: 79.64
HMM Sc=51.96 Sec struct Sc=27.68
* | * | * | * | * | * | * | *
Seq: CGGAGCGTGGCGCAGCCcGGTtAGCGCACTAGTCTGGGAGACTAGGGGtCGAAGGTTCAAATCCTTTCGCTCCGACCA
Str: >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
BX571963.trna16 (3345173-3345249) Length: 77 bp
Type: Val Anticodon: TAC at 35-37 (3345207-3345209) Score: 92.05
HMM Sc=64.77 Sec struct Sc=27.28
* | * | * | * | * | * | * | *
Seq: GGGCGGCTAGCTCAGCTGGTtAGAGCATCTCGTTTACACCGAGAGGGtCGGGAGTTCGAATCTCTCGCCGCCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
BX571963.trna17 (3591387-3591463) Length: 77 bp
Type: Arg Anticodon: TCG at 35-37 (3591421-3591423) Score: 90.16
HMM Sc=68.68 Sec struct Sc=21.48
* | * | * | * | * | * | * | *
Seq: GCGCTCGTAGCTCAGCTGGAtAGAGCATCGGATTTCGATTCCGAGGGtCGGAGGTTCGAATCCTTCCGAGCGCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
BX571963.trna18 (3809553-3809627) Length: 75 bp
Type: Thr Anticodon: TGT at 33-35 (3809585-3809587) Score: 83.07
HMM Sc=58.45 Sec struct Sc=24.62
* | * | * | * | * | * | * |
Seq: GCCGGCGTAGCACAGCGGTAGTGCAGCGGTTTTGTAAACCGAAGGtCGGGAGTTCGATCCTCTCCGCCGGCACCA
Str: >>>>>>>..>>>>.......<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<....
BX571963.trna19 (3934358-3934431) Length: 74 bp
Type: Gln Anticodon: CTG at 33-35 (3934390-3934392) Score: 68.86
HMM Sc=39.93 Sec struct Sc=28.93
* | * | * | * | * | * | * |
Seq: TGGGGAATGGTGTAATGGTAGCACAACAGACTCTGACTCTGTTTGTCTTGGTTCGAATCCAGGTTCCCCAGCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
BX571963.trna20 (4608449-4608523) Length: 75 bp
Type: Undet Anticodon: ??? at 0-0 (0-0) Score: 32.59
HMM Sc=16.20 Sec struct Sc=16.39
* | * | * | * | * | * | * |
Seq: GGCCCGGTGGCGGAAGATtAACGCGGGGGCggTGCAACGCTCTTTtTCCTGGTTCAAGTCCAGGCTGGGCCTCCA
Str: >>>>>>>..>>>.........<<<.>>>>>........<<<<<....>>>>>.......<<<<<<<<<<<<....
BX571963.trna21 (5118650-5118724) Length: 75 bp
Type: Thr Anticodon: GGT at 33-35 (5118682-5118684) Score: 89.61
HMM Sc=62.53 Sec struct Sc=27.08
* | * | * | * | * | * | * |
Seq: GCTGCCGTAGCTCAGTGGTAGAGCACTCCCTTGGTAAGGGAGAGGtCGACAGTTCAATCCTGTCCGGCAGCACCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
BX571963.trna22 (5374792-5374719) Length: 74 bp
Type: Gly Anticodon: CCC at 33-35 (5374760-5374758) Score: 80.62
HMM Sc=58.67 Sec struct Sc=21.95
* | * | * | * | * | * | * |
Seq: GCGGGCGTAGTTCAATGGTAGAACGGCAGCTTCCCAAGCTGCATACGAGGGTTCGATTCCCTTCGCCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
BX571963.trna23 (5252419-5252330) Length: 90 bp
Type: Ser Anticodon: GGA at 35-37 (5252385-5252383) Score: 76.12
HMM Sc=49.44 Sec struct Sc=26.68
* | * | * | * | * | * | * | * | *
Seq: GGAGAGGTGGCCGAGTGGTtgAAGGCGCACGCCTGGAACGCGTGTATACGGGAAACTGTATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>>....<<<<<<.>>>>>.......<<<<<<<<<<<<....
BX571963.trna24 (5249765-5249689) Length: 77 bp
Type: Ile Anticodon: GAT at 35-37 (5249731-5249729) Score: 93.43
HMM Sc=73.71 Sec struct Sc=19.72
* | * | * | * | * | * | * | *
Seq: GGGCTTGTAGCTCAGTTGGTtAGAGCGCGCGCTTGATAAGCGTGAGGtCGGAAGTTCAAGTCTTCCCAGGCCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
BX571963.trna25 (5249655-5249580) Length: 76 bp
Type: Ala Anticodon: TGC at 34-36 (5249622-5249620) Score: 86.35
HMM Sc=74.13 Sec struct Sc=12.22
* | * | * | * | * | * | * | *
Seq: GGGGCCATAGCTCAGCTGGGAGAGCGCGTGCTTTGCAAGCATGAGGtCGTCGGTTCGATCCCGTCTGGCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>.>>>.......<<<.<<<<<<<<....
BX571963.trna26 (5108016-5107941) Length: 76 bp
Type: Phe Anticodon: GAA at 34-36 (5107983-5107981) Score: 88.73
HMM Sc=66.87 Sec struct Sc=21.86
* | * | * | * | * | * | * | *
Seq: GCCCAGGTAGCTCAGTTGGTAGAGCATGCGACTGAAAATCGCAGTGtCGGTGGTTCGATCCCGCCCCTGGGCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
BX571963.trna27 (4996000-4995924) Length: 77 bp
Type: Ile Anticodon: GAT at 35-37 (4995966-4995964) Score: 93.43
HMM Sc=73.71 Sec struct Sc=19.72
* | * | * | * | * | * | * | *
Seq: GGGCTTGTAGCTCAGTTGGTtAGAGCGCGCGCTTGATAAGCGTGAGGtCGGAAGTTCAAGTCTTCCCAGGCCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
BX571963.trna28 (4995890-4995815) Length: 76 bp
Type: Ala Anticodon: TGC at 34-36 (4995857-4995855) Score: 86.35
HMM Sc=74.13 Sec struct Sc=12.22
* | * | * | * | * | * | * | *
Seq: GGGGCCATAGCTCAGCTGGGAGAGCGCGTGCTTTGCAAGCATGAGGtCGTCGGTTCGATCCCGTCTGGCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>.>>>.......<<<.<<<<<<<<....
BX571963.trna29 (4678955-4678879) Length: 77 bp
Type: His Anticodon: GTG at 35-37 (4678921-4678919) Score: 90.83
HMM Sc=66.86 Sec struct Sc=23.97
* | * | * | * | * | * | * | *
Seq: GCAGTTGTAGCTCAGTTGGTtAGAGCGCCTGTCTGTGGAACAGGAGGtCGGTGGTTCGAGCCCACCCAACTGTACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
BX571963.trna30 (3879854-3879766) Length: 89 bp
Type: Leu Anticodon: TAA at 35-37 (3879820-3879818) Score: 79.43
HMM Sc=46.32 Sec struct Sc=33.11
* | * | * | * | * | * | * | * | *
Seq: GCGGGCGTGGCGAAATTGGTaGACGCAAGGGACTTAAAATCCCTCGGCTCGAAAGAGCTgTGCCGGTTCGACCCCGGCCGCCCGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>>....<<<<...>>>>>.......<<<<<<<<<<<<....
BX571963.trna31 (3807196-3807111) Length: 86 bp
Type: Tyr Anticodon: GTA at 35-37 (3807162-3807160) Score: 74.36
HMM Sc=42.73 Sec struct Sc=31.63
* | * | * | * | * | * | * | * | *
Seq: GGGGGAGTGtCCCGAGTGGCaAAGGGAGCTGACTGTAAATCAGCCGCCTCATGGCTtCGCAGGTTCGAGTCCTGCCTCCCCCACCA
Str: >>>>>>>...>>>..........<<<.>>>>>.......<<<<<.>>>....<<<...>>>>>.......<<<<<<<<<<<<....
BX571963.trna32 (3729487-3729414) Length: 74 bp
Type: Gly Anticodon: TCC at 33-35 (3729455-3729453) Score: 82.33
HMM Sc=66.40 Sec struct Sc=15.93
* | * | * | * | * | * | * |
Seq: GCGGGTGTAGCTCAATGGTAGAGCAGCAGCCTTCCAAGCTGAATACGAGGGTTCGATTCCCTTCACCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<..>>>>.......<<<<.....>>>>>.......<<<<<<<<<<<<....
BX571963.trna33 (3701639-3701564) Length: 76 bp
Type: Trp Anticodon: CCA at 34-36 (3701606-3701604) Score: 91.15
HMM Sc=66.67 Sec struct Sc=24.48
* | * | * | * | * | * | * | *
Seq: AGGAGTGTAGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGGGtCGCAGGTTCGAGCCCTGCCACTCCTGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
BX571963.trna34 (3574740-3574656) Length: 85 bp
Type: Leu Anticodon: GAG at 35-37 (3574706-3574704) Score: 69.13
HMM Sc=39.95 Sec struct Sc=29.18
* | * | * | * | * | * | * | * |
Seq: GCGCTCGTGGCGGAATTGGTaGACGCGCTGCCTTGAGGTGGCAGTGAGTAAAATCGTGGGGGTTCGAGTCCCTCCGAGCGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>......<<..>>>>>.......<<<<<<<<<<<<....
BX571963.trna35 (3356522-3356438) Length: 85 bp
Type: Leu Anticodon: TAG at 35-37 (3356488-3356486) Score: 77.53
HMM Sc=51.95 Sec struct Sc=25.58
* | * | * | * | * | * | * | * |
Seq: GCGGGCGTGGCGGAATTGGTaGACGCGCTGGATTTAGGTTCCAGTGACGAAAGTTGTGGGGGTTCGAGTCCCTCCGCCCGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<....
BX571963.trna36 (3338405-3338329) Length: 77 bp
Type: Asp Anticodon: GTC at 35-37 (3338371-3338369) Score: 97.02
HMM Sc=82.50 Sec struct Sc=14.52
* | * | * | * | * | * | * | *
Seq: GCGGGAGTAGCTCAGTTGGTtAGAGCGCCGGCCTGTCACGCCGGAGGtCGCGGGTTCGAGCCCCGTCTCTCGCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
BX571963.trna37 (3018528-3018453) Length: 76 bp
Type: Lys Anticodon: TTT at 34-36 (3018495-3018493) Score: 94.10
HMM Sc=72.78 Sec struct Sc=21.32
* | * | * | * | * | * | * | *
Seq: GAGCGCGTAGCTCAGCCGGTAGAGCACGTGACTTTTAATCATGGGGtCGAGGGTTCGAGTCCCTCCGCGCTCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
BX571963.trna38 (2933866-2933792) Length: 75 bp
Type: Asn Anticodon: GTT at 33-35 (2933834-2933832) Score: 86.74
HMM Sc=66.13 Sec struct Sc=20.61
* | * | * | * | * | * | * |
Seq: TCCCTGGTAGCTCAGTGGTAGAGCAACCGGCTGTTAACCGGTTGGtCGCTGGTTCGAATCCGGCCCGGGGAGCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
BX571963.trna39 (2930040-2929967) Length: 74 bp
Type: Cys Anticodon: GCA at 33-35 (2930008-2930006) Score: 70.06
HMM Sc=42.02 Sec struct Sc=28.04
* | * | * | * | * | * | * |
Seq: GGCCACGTGGCGGAGTGGTTACGCAACGGTCTGCAAAACCGTGTACACCAGTTCAATTCTGGTCGTGGCCTCCA
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
BX571963.trna40 (2893892-2893816) Length: 77 bp
Type: Arg Anticodon: TCT at 35-37 (2893858-2893856) Score: 80.78
HMM Sc=58.74 Sec struct Sc=22.04
* | * | * | * | * | * | * | *
Seq: GGTCCCATAGCTCAACTGGAtAGAGTAGCGGATTTCTACTCCGCGGGtTGCAGGTTCGAATCCTGCTGGGATCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
BX571963.trna41 (2862554-2862480) Length: 75 bp
Type: Glu Anticodon: TTC at 34-36 (2862521-2862519) Score: 60.15
HMM Sc=31.71 Sec struct Sc=28.44
* | * | * | * | * | * | * |
Seq: GCTCCCTTCGTCTATCGGTtAGGACGCCACCCTTTCACGGTGGAGAGAGCGGTTCGATTCCGCTAGGGAGCGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
BX571963.trna42 (2744972-2744879) Length: 94 bp
Type: Ser Anticodon: GCT at 35-37 (2744938-2744936) Score: 76.24
HMM Sc=47.13 Sec struct Sc=29.11
* | * | * | * | * | * | * | * | * |
Seq: GGAGACGTGGCCGAGTGGCtgAAGGCGGCGGTTTGCTAAACCGTTATAGGGTTGTAAAGCCCTATCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>>>>>....<<<<<<<..>>>>>.......<<<<<<<<<<<<....
BX571963.trna43 (2728568-2728479) Length: 90 bp
Type: Ser Anticodon: TGA at 35-37 (2728534-2728532) Score: 79.34
HMM Sc=46.93 Sec struct Sc=32.41
* | * | * | * | * | * | * | * | *
Seq: GGAAGGGTGGCCGAGTGGTttAAGGCACCGGTCTTGAAAACCGGCGTGCCCGCAAGGGTACCGTGGGTTCGAATCCCACCCCTTCCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>>....<<<<<<.>>>>>.......<<<<<<<<<<<<....
BX571963.trna44 (1802563-1802489) Length: 75 bp
Type: Val Anticodon: CAC at 33-35 (1802531-1802529) Score: 81.20
HMM Sc=58.80 Sec struct Sc=22.40
* | * | * | * | * | * | * |
Seq: GGGCGCATAGCTCAGCGGGAGAGCGTTCCCTTCACACGGGAGAGGtCCAAGGTTCGATCCCTTGTGCGCCCACCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
BX571963.trna45 (604683-604599) Length: 85 bp
Type: Leu Anticodon: CAA at 35-37 (604649-604647) Score: 74.81
HMM Sc=48.91 Sec struct Sc=25.90
* | * | * | * | * | * | * | * |
Seq: GCCCCTGTGGCGGAACTGGTaGACGCGCTCGACTCAAAATCGAGTTCCGCAAGGAGTGCTGGTTCGATCCCGGCCAGGGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<....
BX571963.trna46 (526702-526626) Length: 77 bp
Type: Arg Anticodon: CCT at 35-37 (526668-526666) Score: 77.28
HMM Sc=47.85 Sec struct Sc=29.43
* | * | * | * | * | * | * | *
Seq: GGTCCCGTAGCTCAGCCGGAtAGAGCGGCGGTTTCCTAAACCGTAGGtCGGATGTTCGAGTCATCCCGGGATCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
BX571963.trna47 (295365-295291) Length: 75 bp
Type: Gly Anticodon: GCC at 33-35 (295333-295331) Score: 88.17
HMM Sc=69.67 Sec struct Sc=18.50
* | * | * | * | * | * | * |
Seq: GCGGGTGTAGCTCAGGGGTAGAGCACAACCTTGCCAAGGTTGGGGtCGAGGGTTCGAATCCCTTCGCCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
BX571963.trna48 (175810-175721) Length: 90 bp
Type: Ser Anticodon: CGA at 35-37 (175776-175774) Score: 78.76
HMM Sc=47.16 Sec struct Sc=31.60
* | * | * | * | * | * | * | * | *
Seq: GGAGAGGTGGCAGAGTGGTtgAATGCACCGCACTCGAAATGCGGCATAGGTGCAAGCCTATCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>>....<<<<<<.>>>>>.......<<<<<<<<<<<<....
BX571963.trna49 (66585-66510) Length: 76 bp
Type: Ala Anticodon: GGC at 34-36 (66552-66550) Score: 87.23
HMM Sc=69.29 Sec struct Sc=17.94
* | * | * | * | * | * | * | *
Seq: GGGGCCATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGtCGGCGGTTCGATCCCGCCTGGCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
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