| Kingdom |
Category |
Genus/Species |
Count |
|
|
|
53 |
| Archaea |
|
|
17 |
| |
|
|
53 |
| |
Crenarchaeota |
|
4 |
| |
|
Aeropyrum pernix (ape) |
1 |
| |
|
Ignicoccus hospitalis (iho) |
1 |
| |
|
Pyrobaculum aerophilum (pai) |
1 |
| |
|
Thermofilum pendens (tpe) |
1 |
| |
Euryarchaeota |
|
13 |
| |
|
Methanosarcina acetivorans (mac) |
3 |
| |
|
Methanosarcina barkeri (mba) |
2 |
| |
|
Candidatus Methanoregula boonei (mbn) |
1 |
| |
|
Methanoculleus marisnigri (mem) |
1 |
| |
|
Methanopyrus kandleri (mka) |
1 |
| |
|
Methanosarcina mazei (mma) |
2 |
| |
|
Methanosphaera stadtmanae (mst) |
1 |
| |
|
Natronomonas pharaonis (nph) |
1 |
| |
|
Thermoplasma acidophilum (tac) |
1 |
| Bacteria |
|
|
4580 |
| |
Acidobacteria |
|
14 |
| |
|
Acidobacteria bacterium (aba) |
3 |
| |
|
Solibacter usitatus (sus) |
11 |
| |
Actinobacteria |
|
30 |
| |
|
Arthrobacter aurescens (aau) |
1 |
| |
|
Acidothermus cellulolyticus (ace) |
1 |
| |
|
Clavibacter michiganensis (cmi) |
2 |
| |
|
Frankia alni (fal) |
2 |
| |
|
Frankia sp. CcI3 (fra) |
1 |
| |
|
Frankia sp. EAN1pec (fre) |
2 |
| |
|
Mycobacterium bovis BCG Pasteur 1173P2 (mbb) |
1 |
| |
|
Mycobacterium gilvum (mgi) |
1 |
| |
|
Mycobacterium sp. JLS (mjl) |
2 |
| |
|
Mycobacterium smegmatis (msm) |
2 |
| |
|
Nocardioides sp. JS614 (nca) |
1 |
| |
|
Nocardia farcinica (nfa) |
1 |
| |
|
Rhodococcus sp. RHA1 (rha) |
2 |
| |
|
Rubrobacter xylanophilus (rxy) |
3 |
| |
|
Streptomyces coelicolor (sco) |
3 |
| |
|
Saccharopolyspora erythraea (sen) |
3 |
| |
|
Streptomyces avermitilis (sma) |
2 |
| |
Bacteroides |
|
9 |
| |
|
Cytophaga hutchinsonii (chu) |
1 |
| |
|
Flavobacterium johnsoniae (fjo) |
3 |
| |
|
Flavobacterium psychrophilum (fps) |
3 |
| |
|
Gramella forsetii (gfo) |
2 |
| |
Cyanobacteria |
|
24 |
| |
|
Acaryochloris marina (amr) |
3 |
| |
|
Anabaena sp. PCC7120 (ana) |
3 |
| |
|
Anabaena variabilis (ava) |
6 |
| |
|
Cyanobacteria Yellowstone A-Prime (cya) |
1 |
| |
|
Cyanobacteria Yellowstone B-Prime (cyb) |
1 |
| |
|
Gloeobacter violaceus (gvi) |
4 |
| |
|
Prochlorococcus marinus MIT 9303 (pmf) |
1 |
| |
|
Prochlorococcus marinus MIT9313 (pmt) |
1 |
| |
|
Synechococcus sp. CC9605 (syd) |
1 |
| |
|
Synechocystis sp. PCC6803 (syn) |
1 |
| |
|
Trichodesmium erythraeum (ter) |
2 |
| |
Deinococcus-Thermus |
|
4 |
| |
|
Deinococcus geothermalis (dge) |
3 |
| |
|
Thermus thermophilus HB8 (ttj) |
1 |
| |
Firmicutes |
|
17 |
| |
|
Alkaliphilus metalliredigens (amt) |
1 |
| |
|
Bacillus anthracis A2012 (baa) |
1 |
| |
|
Bacillus amyloliquefaciens (bay) |
2 |
| |
|
Bacillus cereus ATCC 10987 (bca) |
1 |
| |
|
Bacillus clausii (bcl) |
1 |
| |
|
Clostridium beijerinckii (cbe) |
1 |
| |
|
Clostridium difficile (cdf) |
1 |
| |
|
Clostridium kluyveri (ckl) |
2 |
| |
|
Geobacillus thermodenitrificans (gtn) |
1 |
| |
|
Pelotomaculum thermopropionicum (pth) |
2 |
| |
|
Symbiobacterium thermophilum (sth) |
2 |
| |
|
Syntrophomonas wolfei (swo) |
2 |
| |
Green nonsulfur bacteria |
|
6 |
| |
|
Herpetosiphon aurantiacus (hau) |
1 |
| |
|
Roseiflexus castenholzii DSM13941 (rca) |
4 |
| |
|
Roseiflexus sp. RS-1 (rrs) |
1 |
| |
Green sulfur bacteria |
|
6 |
| |
|
Chlorobium chlorochromatii (cch) |
3 |
| |
|
Chlorobium phaeobacteroides (cph) |
1 |
| |
|
Chlorobaculum tepidum (cte) |
1 |
| |
|
Pelodictyon luteolum (plt) |
1 |
| |
Hyperthermophilic bacteria |
|
1 |
| |
|
Thermotoga lettingae (tle) |
1 |
| |
Planctomyces |
|
1 |
| |
|
Rhodopirellula baltica (rba) |
1 |
| |
Proteobacteria |
|
4467 |
| |
|
Acidovorax avenae (aav) |
2 |
| |
|
Alcanivorax borkumensis (abo) |
1 |
| |
|
Acinetobacter baumannii (acb) |
1 |
| |
|
Acidiphilium cryptum JF-5 (acr) |
7 |
| |
|
Anaeromyxobacter dehalogenans (ade) |
5 |
| |
|
Alkalilimnicola ehrlichei (aeh) |
1 |
| |
|
Anaeromyxobacter sp. Fw109-5 (afw) |
1 |
| |
|
Acidovorax sp. JS42 (ajs) |
3 |
| |
|
Actinobacillus succinogenes (asu) |
1 |
| |
|
Agrobacterium tumefaciens C58 (Cereon) (atc) |
22 |
| |
|
Azorhizobium caulinodans (azc) |
82 |
| |
|
Azoarcus sp. BH72 (azo) |
9 |
| |
|
Burkholderia cepacia (bam) |
6 |
| |
|
Bordetella bronchiseptica (bbr) |
6 |
| |
|
Bradyrhizobium sp. BTAi1 (bbt) |
731 |
| |
|
Burkholderia cenocepacia HI2424 (bch) |
4 |
| |
|
Bartonella henselae (bhe) |
2 |
| |
|
Bradyrhizobium japonicum (bja) |
1219 |
| |
|
Brucella abortus (bmb) |
3 |
| |
|
Brucella melitensis biovar Abortus (bmf) |
1 |
| |
|
Burkholderia mallei NCTC 10247 (bmn) |
1 |
| |
|
Brucella suis (bms) |
3 |
| |
|
Brucella ovis (bov) |
5 |
| |
|
Bordetella parapertussis (bpa) |
1 |
| |
|
Burkholderia pseudomallei 668 (bpd) |
1 |
| |
|
Burkholderia pseudomallei 1710b (bpm) |
1 |
| |
|
Burkholderia pseudomallei K96243 (bps) |
1 |
| |
|
Bradyrhizobium sp. ORS278 (bra) |
563 |
| |
|
Burkholderia thailandensis (bte) |
8 |
| |
|
Burkholderia sp. 383 (bur) |
11 |
| |
|
Burkholderia vietnamiensis (bvi) |
7 |
| |
|
Burkholderia xenovorans (bxe) |
11 |
| |
|
Coxiella burnetii Dugway 7E9-12 (cbd) |
4 |
| |
|
Coxiella burnetii RSA 493 (cbu) |
1 |
| |
|
Caulobacter crescentus (ccr) |
13 |
| |
|
Campylobacter fetus (cff) |
1 |
| |
|
Chromohalobacter salexigens (csa) |
1 |
| |
|
Chromobacterium violaceum (cvi) |
3 |
| |
|
Delftia acidovorans (dac) |
12 |
| |
|
Dechloromonas aromatica (dar) |
12 |
| |
|
Candidatus Desulfococcus oleovorans (dol) |
2 |
| |
|
Dinoroseobacter shibae (dsh) |
2 |
| |
|
Desulfovibrio vulgaris DP4 (dvl) |
2 |
| |
|
Desulfovibrio vulgaris Hildenborough (dvu) |
1 |
| |
|
Azoarcus sp. EbN1 (eba) |
12 |
| |
|
Erwinia carotovora (eca) |
3 |
| |
|
Escherichia coli UTI89 (UPEC) (eci) |
1 |
| |
|
Escherichia coli O157 Sakai (EHEC) (ecs) |
1 |
| |
|
Enterobacter sp. 638 (ent) |
1 |
| |
|
Enterobacter sakazakii (esa) |
4 |
| |
|
Francisella tularensis subsp. novicida U112 (ftn) |
1 |
| |
|
Granulobacter bethesdensis (gbe) |
10 |
| |
|
Geobacter metallireducens (gme) |
2 |
| |
|
Gluconobacter oxydans (gox) |
4 |
| |
|
Geobacter sulfurreducens (gsu) |
1 |
| |
|
Geobacter uraniumreducens (gur) |
4 |
| |
|
Herminiimonas arsenicoxydans (har) |
2 |
| |
|
Hahella chejuensis (hch) |
3 |
| |
|
Halorhodospira halophila (hha) |
15 |
| |
|
Hyphomonas neptunium (hne) |
5 |
| |
|
Jannaschia sp. CCS1 (jan) |
8 |
| |
|
Klebsiella pneumoniae (kpn) |
1 |
| |
|
Magnetospirillum magneticum (mag) |
36 |
| |
|
Marinobacter aquaeolei (maq) |
5 |
| |
|
Methylococcus capsulatus (mca) |
9 |
| |
|
Mesorhizobium sp. BNC1 (mes) |
21 |
| |
|
Methylobacillus flagellatus (mfa) |
3 |
| |
|
Magnetococcus sp. MC-1 (mgm) |
1 |
| |
|
Mesorhizobium loti (mlo) |
40 |
| |
|
Maricaulis maris (mmr) |
1 |
| |
|
Minibacterium massiliensis (mms) |
18 |
| |
|
Methylibium petroleiphilum (mpt) |
8 |
| |
|
Mannheimia succiniciproducens (msu) |
1 |
| |
|
Myxococcus xanthus (mxa) |
4 |
| |
|
Novosphingobium aromaticivorans (nar) |
7 |
| |
|
Nitrosomonas europaea (neu) |
1 |
| |
|
Neisseria gonorrhoeae (ngo) |
1 |
| |
|
Nitrobacter hamburgensis (nha) |
667 |
| |
|
Nitrosospira multiformis (nmu) |
4 |
| |
|
Nitrosococcus oceani (noc) |
5 |
| |
|
Nitrobacter winogradskyi (nwi) |
208 |
| |
|
Ochrobactrum anthropi (oan) |
20 |
| |
|
Pseudomonas aeruginosa PAO1 (pae) |
2 |
| |
|
Pseudomonas aeruginosa PA7 (pap) |
8 |
| |
|
Pseudoalteromonas atlantica (pat) |
1 |
| |
|
Pseudomonas aeruginosa UCBPP-PA14 (pau) |
8 |
| |
|
Pelobacter carbinolicus (pca) |
1 |
| |
|
Paracoccus denitrificans (pde) |
24 |
| |
|
Pseudomonas entomophila (pen) |
6 |
| |
|
Pseudomonas fluorescens Pf-5 (pfl) |
7 |
| |
|
Pseudomonas fluorescens PfO-1 (pfo) |
2 |
| |
|
Psychromonas ingrahamii (pin) |
2 |
| |
|
Parvibaculum lavamentivorans (pla) |
24 |
| |
|
Photorhabdus luminescens (plu) |
1 |
| |
|
Pasteurella multocida (pmu) |
1 |
| |
|
Pseudomonas mendocina (pmy) |
2 |
| |
|
Polaromonas naphthalenivorans (pna) |
9 |
| |
|
Polynucleobacter sp. QLW-P1DMWA-1 (pnu) |
4 |
| |
|
Polaromonas sp. JS666 (pol) |
4 |
| |
|
Pelobacter propionicus (ppd) |
2 |
| |
|
Pseudomonas putida F1 (ppf) |
3 |
| |
|
Pseudomonas putida KT2440 (ppu) |
1 |
| |
|
Pseudomonas stutzeri (psa) |
4 |
| |
|
Pseudomonas syringae pv. syringae B728a (psb) |
4 |
| |
|
Pseudomonas syringae pv. phaseolicola 1448A (psp) |
2 |
| |
|
Pseudomonas syringae pv. tomato DC3000 (pst) |
4 |
| |
|
Candidatus Pelagibacter ubique (pub) |
1 |
| |
|
Roseobacter denitrificans (rde) |
2 |
| |
|
Ralstonia eutropha H16 (reh) |
13 |
| |
|
Rhizobium etli (ret) |
9 |
| |
|
Ralstonia eutropha JMP134 (reu) |
6 |
| |
|
Rhodoferax ferrireducens (rfr) |
8 |
| |
|
Rhizobium leguminosarum (rle) |
28 |
| |
|
Ralstonia metallidurans (rme) |
11 |
| |
|
Rhodospirillum rubrum (rru) |
72 |
| |
|
Rhodobacter sphaeroides ATCC 17029 (rsh) |
11 |
| |
|
Ralstonia solanacearum (rso) |
6 |
| |
|
Rhodobacter sphaeroides 2.4.1 (rsp) |
9 |
| |
|
Rhodobacter sphaeroides ATCC 17025 (rsq) |
19 |
| |
|
Sphingopyxis alaskensis (sal) |
1 |
| |
|
Syntrophus aciditrophicus (sat) |
1 |
| |
|
Shewanella amazonensis (saz) |
1 |
| |
|
Syntrophobacter fumaroxidans (sfu) |
2 |
| |
|
Shigella flexneri 8401 (serotype 5b) (sfv) |
1 |
| |
|
Shewanella sp. MR-7 (shm) |
1 |
| |
|
Shewanella sp. W3-18-1 (shw) |
2 |
| |
|
Silicibacter pomeroyi (sil) |
13 |
| |
|
Silicibacter sp. TM1040 (sit) |
6 |
| |
|
Shewanella loihica (slo) |
1 |
| |
|
Sinorhizobium medicae (smd) |
8 |
| |
|
Sinorhizobium meliloti (sme) |
16 |
| |
|
Serratia proteamaculans (spe) |
2 |
| |
|
Shewanella sediminis (sse) |
1 |
| |
|
Sphingomonas wittichii (swi) |
12 |
| |
|
Thiobacillus denitrificans (tbd) |
6 |
| |
|
Thiomicrospira crunogena (tcx) |
1 |
| |
|
Thiomicrospira denitrificans (tdn) |
1 |
| |
|
Verminephrobacter eiseniae (vei) |
14 |
| |
|
Vibrio harveyi (vha) |
1 |
| |
|
Vibrio vulnificus YJ016 (vvy) |
2 |
| |
|
Xanthomonas axonopodis (xac) |
3 |
| |
|
Xanthobacter autotrophicus (xau) |
126 |
| |
|
Xanthomonas campestris pv. campestris 8004 (xcb) |
2 |
| |
|
Xanthomonas campestris pv. vesicatoria (xcv) |
4 |
| |
|
Xylella fastidiosa 9a5c (xfa) |
1 |
| |
|
Xylella fastidiosa Temecula1 (xft) |
2 |
| |
|
Xanthomonas oryzae MAFF311018 (xom) |
1 |
| |
|
Yersinia enterocolitica (yen) |
2 |
| |
Spirochete |
|
1 |
| |
|
Leptospira borgpetersenii L550 (lbl) |
1 |
| Eukaryotes |
|
|
13 |
| |
Animals |
|
2 |
| |
|
Caenorhabditis elegans (nematode) (cel) |
1 |
| |
|
Strongylocentrotus purpuratus (purple sea urchin) (spu) |
1 |
| |
Fungi |
|
6 |
| |
|
Aspergillus niger (ang) |
1 |
| |
|
Aspergillus nidulans (ani) |
1 |
| |
|
Fusarium graminearum (fgr) |
1 |
| |
|
Saccharomyces cerevisiae (sce) |
1 |
| |
|
Schizosaccharomyces pombe (spo) |
1 |
| |
|
Yarrowia lipolytica (yli) |
1 |
| |
Plants |
|
2 |
| |
|
Ostreococcus lucimarinus (olu) |
2 |
| |
Protists |
|
3 |
| |
|
Dictyostelium discoideum (ddi) |
1 |
| |
|
Leishmania major (lma) |
2 |
| NULL |
|
|
159 |
| TOTAL |
|
|
4822 |
![[space]](http://homer.ornl.gov/compbio/public/images/bluespacer.gif){kind=small}
![[space]](http://maple.lsd.ornl.gov/common/images/bluespacer.gif){kind=small}