Top 20 Categories

Top 20 InterPro

277	NULL	NULL
159	IPR003593	AAA+ ATPase, core
132	IPR003439	ABC transporter related
79	IPR001789	Response regulator receiver
63	IPR002198	Short-chain dehydrogenase/reductase SDR
62	IPR003594	ATP-binding region, ATPase-like
61	IPR000515	Binding-protein-dependent transport systems inner membrane component
56	IPR002347	Glucose/ribitol dehydrogenase
55	IPR006311	Twin-arginine translocation pathway signal
55	IPR005467	Histidine kinase
52	IPR004358	Histidine kinase related protein, C-terminal
46	IPR003661	Histidine kinase A, N-terminal
44	IPR000014	PAS
42	IPR001851	Bacterial inner-membrane translocator
40	IPR003660	Histidine kinase, HAMP region
40	IPR001647	Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal
40	IPR000873	AMP-dependent synthetase and ligase
39	IPR011701	Major facilitator superfamily MFS-1
38	IPR013968	KR
36	IPR000160	GGDEF

Top 20 HMMPfam

121	PF00005	ABC_tran
74	PF00072	Response_reg
62	PF02518	HATPase_c
61	PF00528	BPD_transp_1
61	PF00106	adh_short
46	PF00512	HisKA
42	PF02653	BPD_transp_2
40	PF00501	AMP-binding
40	PF00440	TetR_N
39	PF07690	MFS_1
38	PF08659	KR
38	PF00672	HAMP
36	PF00990	GGDEF
33	PF01370	Epimerase
33	PF01266	DAO
30	PF08448	PAS_4
30	PF00989	PAS
30	PF00378	ECH
30	PF00126	HTH_1
29	PF00441	Acyl-CoA_dh_1

Top 20 HMMTigr

55	TIGR01409	TAT_signal_seq
39	TIGR00229	sensory_box
36	TIGR00254	GGDEF
23	TIGR01730	RND_mfp
18	TIGR02937	sigma70-ECF
13	TIGR00231	small_GTP
10	TIGR01783	TonB-siderophor
9	TIGR01509	HAD-SF-IA-v3
7	TIGR01930	AcCoA-C-Actrans
7	TIGR01494	ATPase_P-type
7	TIGR00915	2A0602
6	TIGR01727	oligo_HPY
6	TIGR01414	autotrans_barl
6	TIGR01352	tonB_Cterm
6	TIGR00369	unchar_dom_1
5	TIGR02283	MltB_2
5	TIGR01326	OAH_OAS_sulfhy
5	TIGR01287	nifH
5	TIGR00786	dctM
4	TIGR02797	exbB

Top 20 ProfileScan

121	PS50893	ABC_TRANSPORTER_2
78	PS50110	RESPONSE_REGULATORY
77	PS00013	PROKAR_LIPOPROTEIN
61	PS50928	ABC_TM1
55	PS50109	HIS_KIN
39	PS50977	HTH_TETR_2
39	PS50885	HAMP
36	PS50887	GGDEF
34	PS50850	MFS
34	PS50112	PAS
29	PS50111	CHEMOTAXIS_TRANSDUC_2
27	PS51186	GNAT
27	PS50931	HTH_LYSR
23	PS50113	PAC
23	PS01124	HTH_ARAC_FAMILY_2
21	PS50192	T_SNARE
18	PS51007	CYTC
18	PS50883	EAL
17	PS50995	HTH_MARR_2
15	PS51192	HELICASE_ATP_BIND_1

Top 20 FPrintScan

56	PR00081	GDHRDH
52	PR00344	BCTRLSENSOR
46	PR00080	SDRFAMILY
37	PR00154	AMPBINDING
32	PR00455	HTHTETR
25	PR00368	FADPNR
24	PR00039	HTHLYSR
22	PR00702	ACRIFLAVINRP
21	PR00032	HTHARAC
19	PR01590	HTHFIS
19	PR00260	CHEMTRNSDUCR
18	PR01167	INSADHFAMILY
16	PR00411	PNDRDTASEI
14	PR00469	PNDRDTASEII
14	PR00420	RNGMNOXGNASE
14	PR00111	ABHYDROLASE
13	PR00353	4FE4SFRDOXIN
11	PR00038	HTHLUXR
10	PR00598	HTHMARR
10	PR00502	NUDIXFAMILY

Top 20 BlastProDom

114	PD000006	sp_Q6NDQ6_RHOPA_Q6NDQ6;
77	PD000039	sp_CHB3_RHOPA_P62645;
12	PD000329	sp_Q89WQ8_BRAJA_Q89WQ8;
12	PD000139	sp_Q8KTE3_METEX_Q8KTE3;
11	PD000307	sp_Q6NCZ5_RHOPA_Q6NCZ5;
8	PD000930	sp_Q6ND96_RHOPA_Q6ND96;
6	PD001979	sp_LHB1_RHOSH_P02951;
6	PD000288	sp_Q6N995_RHOPA_Q6N995;
6	PD000001	sp_Q6AHM0_BBBBB_Q6AHM0;
5	PD454109	sp_Q8XC86_ECO57_Q8XC86;
5	PD139017	sp_Q6NCR8_RHOPA_Q6NCR8;
5	PD002334	sp_Q9RTR1_DEIRA_Q9RTR1;
5	PD001895	sp_Q6NCE7_RHOPA_Q6NCE7;
5	PD001859	sp_Q6NBD0_RHOPA_Q6NBD0;
4	PD688335	sp_Q6NBQ8_RHOPA_Q6NBQ8;
4	PD354634	sp_Q8D5M6_VIBVU_Q8D5M6;
4	PD023420	sp_Q6NBC4_RHOPA_Q6NBC4;
4	PD023318	sp_VIC1_AGRRH_P13459;
4	PD020774	sp_Q6NDR8_RHOPA_Q6NDR8;
4	PD002691	sp_Q6N9S5_RHOPA_Q6N9S5;

Top 20 COGs

246	COG4988	ABC-type transport system involved in cytochrome bd biosynthesis ATPase and permease components
246	COG1120	ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components
244	COG4987	ABC-type transport system involved in cytochrome bd biosynthesis fused ATPase and permease components
244	COG1124	ABC-type dipeptide/oligopeptide/nickel transport system ATPase component
242	COG4555	ABC-type Na+ transport system ATPase component
242	COG0444	ABC-type dipeptide/oligopeptide/nickel transport system ATPase component
240	COG1134	ABC-type polysaccharide/polyol phosphate transport system ATPase component
238	COG4615	ABC-type siderophore export system fused ATPase and permease components
158	COG2197	Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
156	COG0745	Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
148	COG3437	Response regulator containing a CheY-like receiver domain and an HD-GYP domain
146	COG4565	Response regulator of citrate/malate metabolism
130	COG3279	Response regulator of the LytR/AlgR family
125	COG1131	ABC-type multidrug transport system ATPase component
124	COG1245	Predicted ATPase RNase L inhibitor (RLI) homolog
124	COG1136	ABC-type antimicrobial peptide transport system ATPase component
124	COG1122	ABC-type cobalt transport system ATPase component
124	COG1028	Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)
123	COG4618	ABC-type protease/lipase transport system ATPase and permease components
123	COG4148	ABC-type molybdate transport system ATPase component

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