Summary of the tRNAs found by tRNAscan-se
| Amino Acid | Count |
|---|
| Ala | 4 |
| Arg | 4 |
| Asn | 1 |
| Asp | 1 |
| Cys | 1 |
| Gln | 1 |
| Glu | 1 |
| Gly | 3 |
| His | 1 |
| Ile | 2 |
| Leu | 5 |
| Lys | 1 |
| Met | 2 |
| Phe | 1 |
| Pro | 3 |
| Pseudo | 2 |
| Ser | 4 |
| Thr | 3 |
| Trp | 1 |
| Tyr | 1 |
| Undet | 0 |
| Val | 3 |
List of tRNAs found by tRNAscan-se
| Amino Acid | Anticodon | Contig | tRNA | tRNA Location | Intron Location | Cove Score | HMM Score |
|---|
| Ala | CGC | Prochlorococcus | 23 | 1905155..1905227 | 0..0 | 76.82 | 56.52 |
| Ala | GGC | Prochlorococcus | 6 | 430628..430700 | 0..0 | 83.37 | 64.28 |
| Ala | TGC | Prochlorococcus | 36 | 1751894..1751822 | 0..0 | 91.01 | 73.87 |
| Ala | TGC | Prochlorococcus | 3 | 210594..210666 | 0..0 | 91.01 | 73.87 |
| Arg | ACG | Prochlorococcus | 29 | 1956763..1956690 | 0..0 | 76.73 | 55.57 |
| Arg | CCG | Prochlorococcus | 33 | 1817015..1816942 | 0..0 | 78.52 | 60.00 |
| Arg | CCT | Prochlorococcus | 27 | 2059396..2059323 | 0..0 | 84.56 | 66.34 |
| Arg | TCT | Prochlorococcus | 17 | 1466353..1466426 | 0..0 | 82.14 | 62.77 |
| Asn | GTT | Prochlorococcus | 24 | 2101164..2101235 | 0..0 | 74.62 | 57.64 |
| Asp | GTC | Prochlorococcus | 15 | 1395301..1395374 | 0..0 | 78.26 | 62.40 |
| Cys | GCA | Prochlorococcus | 34 | 1800921..1800851 | 0..0 | 67.72 | 36.91 |
| Gln | TTG | Prochlorococcus | 32 | 1831933..1831862 | 0..0 | 58.60 | 28.69 |
| Glu | TTC | Prochlorococcus | 13 | 1191237..1191312 | 0..0 | 58.07 | 33.83 |
| Gly | CCC | Prochlorococcus | 45 | 42353..42282 | 0..0 | 74.79 | 49.45 |
| Gly | GCC | Prochlorococcus | 1 | 87820..87891 | 0..0 | 84.10 | 60.81 |
| Gly | TCC | Prochlorococcus | 38 | 1484588..1484518 | 0..0 | 59.75 | 43.14 |
| His | GTG | Prochlorococcus | 42 | 370882..370810 | 0..0 | 65.02 | 44.98 |
| Ile | GAT | Prochlorococcus | 2 | 210511..210584 | 0..0 | 86.10 | 59.20 |
| Ile | GAT | Prochlorococcus | 35 | 1751977..1751904 | 0..0 | 86.10 | 59.20 |
| Leu | CAA | Prochlorococcus | 41 | 379441..379360 | 0..0 | 68.97 | 41.98 |
| Leu | CAG | Prochlorococcus | 5 | 380928..381011 | 0..0 | 62.23 | 31.20 |
| Leu | GAG | Prochlorococcus | 37 | 1689905..1689824 | 0..0 | 55.81 | 27.60 |
| Leu | TAA | Prochlorococcus | 7 | 518780..518865 | 0..0 | 75.22 | 44.48 |
| Leu | TAG | Prochlorococcus | 30 | 1921488..1921407 | 0..0 | 58.17 | 28.97 |
| Lys | TTT | Prochlorococcus | 39 | 1129270..1129199 | 0..0 | 70.57 | 35.90 |
| Met | CAT | Prochlorococcus | 11 | 904478..904554 | 0..0 | 77.15 | 54.44 |
| Met | CAT | Prochlorococcus | 9 | 819958..820031 | 0..0 | 81.17 | 59.26 |
| Phe | GAA | Prochlorococcus | 21 | 1778675..1778750 | 0..0 | 78.00 | 49.30 |
| Pro | CGG | Prochlorococcus | 31 | 1870470..1870397 | 0..0 | 78.95 | 54.46 |
| Pro | GGG | Prochlorococcus | 40 | 540526..540453 | 0..0 | 71.10 | 48.40 |
| Pro | TGG | Prochlorococcus | 12 | 1002550..1002623 | 0..0 | 80.66 | 58.00 |
| Pseudo | CAT | Prochlorococcus | 28 | 1974148..1974076 | 0..0 | 40.01 | 8.21 |
| Pseudo | TAC | Prochlorococcus | 25 | 2143041..2143115 | 0..0 | 24.63 | 31.87 |
| Ser | CGA | Prochlorococcus | 4 | 329018..329102 | 0..0 | 70.56 | 39.95 |
| Ser | GCT | Prochlorococcus | 22 | 1854201..1854289 | 0..0 | 67.55 | 39.68 |
| Ser | GGA | Prochlorococcus | 8 | 755235..755321 | 0..0 | 68.33 | 37.14 |
| Ser | TGA | Prochlorococcus | 10 | 871424..871510 | 0..0 | 54.67 | 32.06 |
| Thr | CGT | Prochlorococcus | 19 | 1623006..1623080 | 0..0 | 82.39 | 68.24 |
| Thr | GGT | Prochlorococcus | 44 | 227816..227745 | 0..0 | 82.87 | 58.18 |
| Thr | TGT | Prochlorococcus | 20 | 1762100..1762171 | 0..0 | 73.09 | 55.16 |
| Trp | CCA | Prochlorococcus | 14 | 1394722..1394794 | 0..0 | 81.69 | 59.20 |
| Tyr | GTA | Prochlorococcus | 43 | 227908..227824 | 0..0 | 54.65 | 28.17 |
| Val | CAC | Prochlorococcus | 16 | 1410332..1410403 | 0..0 | 79.65 | 61.49 |
| Val | GAC | Prochlorococcus | 18 | 1522156..1522227 | 0..0 | 79.57 | 55.36 |
| Val | TAC | Prochlorococcus | 26 | 2336700..2336629 | 0..0 | 87.47 | 67.46 |
tRNA Models
Prochlorococcus.trna1 (87820-87891) Length: 72 bp
Type: Gly Anticodon: GCC at 33-35 (87852-87854) Score: 84.10
HMM Sc=60.81 Sec struct Sc=23.29
* | * | * | * | * | * | * |
Seq: GCGGATGTAGCTCAGTGGTAGAGCATCTCCTTGCCAAGGAGAGGGtCGAGAGTTCGAATCTCTTCATCCGCT
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna2 (210511-210584) Length: 74 bp
Type: Ile Anticodon: GAT at 35-37 (210545-210547) Score: 86.10
HMM Sc=59.20 Sec struct Sc=26.90
* | * | * | * | * | * | * |
Seq: GGGCCATTAGCTCAGGTGGTtAGAGCGCACCCCTGATAAGGGTGAGGtCCCTGGTTCAAGTCCAGGATGGCCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna3 (210594-210666) Length: 73 bp
Type: Ala Anticodon: TGC at 34-36 (210627-210629) Score: 91.01
HMM Sc=73.87 Sec struct Sc=17.14
* | * | * | * | * | * | * |
Seq: GGGGGTTTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGtCAGCGGTTCGAGTCCGCTAACCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna4 (329018-329102) Length: 85 bp
Type: Ser Anticodon: CGA at 35-37 (329052-329054) Score: 70.56
HMM Sc=39.95 Sec struct Sc=30.61
* | * | * | * | * | * | * | * |
Seq: GGAGAGGTGGCTGAGTGGTcgAAAGCGAACGACTCGAAATCGTTTGACGGGCAACCGTCCGTGGGTTCGAATCCCACCCTCTCCG
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>....<<<<<.>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna5 (380928-381011) Length: 84 bp
Type: Leu Anticodon: CAG at 35-37 (380962-380964) Score: 62.23
HMM Sc=31.20 Sec struct Sc=31.03
* | * | * | * | * | * | * | * |
Seq: GCGGATGTGGCGGAATTGGTaGACGCGCTAGTTTCAGGTACTAGTGGCAGCAATGTCGTGGGAGTTCAAGTCTCCCCATCCGCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna6 (430628-430700) Length: 73 bp
Type: Ala Anticodon: GGC at 34-36 (430661-430663) Score: 83.37
HMM Sc=64.28 Sec struct Sc=19.09
* | * | * | * | * | * | * |
Seq: GGGGCCATAGCTCAGCTGGTAGAGCACCTGCATGGCATGCAGGGGGtCAGGAGTTCGAGTCTCCTTGGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna7 (518780-518865) Length: 86 bp
Type: Leu Anticodon: TAA at 35-37 (518814-518816) Score: 75.22
HMM Sc=44.48 Sec struct Sc=30.74
* | * | * | * | * | * | * | * | *
Seq: GGGGGCATGGCGGAATTGGTaGACGCAAGCGACTTAAAATCGCTTGTCCTGAAAAGGACGTGGGGGTTCAAGTCCCCCTGCCCCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>....<<<<<..>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna8 (755235-755321) Length: 87 bp
Type: Ser Anticodon: GGA at 35-37 (755269-755271) Score: 68.33
HMM Sc=37.14 Sec struct Sc=31.19
* | * | * | * | * | * | * | * | *
Seq: GGAGAGGTGGCCGAGTGGTcgAAGGCGCAGCACTGGAAATGCTGTATAGGGGCAACTCTATCGAGGGTTCGAATCCCTCCCTCTCCG
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>>....<<<<<<.>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna9 (819958-820031) Length: 74 bp
Type: Met Anticodon: CAT at 35-37 (819992-819994) Score: 81.17
HMM Sc=59.26 Sec struct Sc=21.91
* | * | * | * | * | * | * |
Seq: GGCTCGGTAGCTCAGCTGGTtAGAGCGTGGGATTCATAACCCCAAGGtCGGGAGTTCAAGTCTCCCCCGAGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>.........<<<<.....>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna10 (871424-871510) Length: 87 bp
Type: Ser Anticodon: TGA at 35-37 (871458-871460) Score: 54.67
HMM Sc=32.06 Sec struct Sc=22.61
* | * | * | * | * | * | * | * | *
Seq: GGAGAGGTGGTCGAGTGGTtgATGGCTCTGGTCTTGAAAACCAGCATGTCCGCAAGGGCATCGTGGGTTCGAATCCCACCCTCTCCG
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<..>>>>>....<<<<<..>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna11 (904478-904554) Length: 77 bp
Type: Met Anticodon: CAT at 35-37 (904512-904514) Score: 77.15
HMM Sc=54.44 Sec struct Sc=22.71
* | * | * | * | * | * | * | *
Seq: CGCGGGGTAGAGCAGTCtGGTAGCTCGTCGGGCTCATAACCCGAAGGtCGGGAGTTCAAATCTCCCCCCCGCCACCT
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....
Prochlorococcus.trna12 (1002550-1002623) Length: 74 bp
Type: Pro Anticodon: TGG at 35-37 (1002584-1002586) Score: 80.66
HMM Sc=58.00 Sec struct Sc=22.66
* | * | * | * | * | * | * |
Seq: CGGGGCGTGGCGCAGCTtGGTAGCGCGGGTGCTTTGGGAGCACTAGGtCGCAGGTTCGAATCCTGTCGCCCCGA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna13 (1191237-1191312) Length: 76 bp
Type: Glu Anticodon: TTC at 35-37 (1191271-1191273) Score: 58.07
HMM Sc=33.83 Sec struct Sc=24.24
* | * | * | * | * | * | * | *
Seq: GCCCCCATCGTCTAGAGGCctAGGACACCTCCCTTTCACGGAGGCGACAGGGGTTCGAATCCCCTTGGGGGTATCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
Prochlorococcus.trna14 (1394722-1394794) Length: 73 bp
Type: Trp Anticodon: CCA at 34-36 (1394755-1394757) Score: 81.69
HMM Sc=59.20 Sec struct Sc=22.49
* | * | * | * | * | * | * |
Seq: GCGCCGTTAGTTCAGTTGGTAGAACGCAGGTCTCCAAAACCTGATGtCGGGGGTTCAAGTCCTCCACGGCGCG
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna15 (1395301-1395374) Length: 74 bp
Type: Asp Anticodon: GTC at 35-37 (1395335-1395337) Score: 78.26
HMM Sc=62.40 Sec struct Sc=15.86
* | * | * | * | * | * | * |
Seq: GGGACCGTAGTTCAATTGGTtAGAGCACCGCCCTGTCACGGCGGAAGtTGCGGGTTCGAACCCCGTCGGTCCCG
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna16 (1410332-1410403) Length: 72 bp
Type: Val Anticodon: CAC at 33-35 (1410364-1410366) Score: 79.65
HMM Sc=61.49 Sec struct Sc=18.16
* | * | * | * | * | * | * |
Seq: GGGCGATTAGCACAGTGGTAGCGCACTTCCTTCACACGGAAGGGGtCGTGGGTTCGAATCCCGCATCGCCCA
Str: >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna17 (1466353-1466426) Length: 74 bp
Type: Arg Anticodon: TCT at 35-37 (1466387-1466389) Score: 82.14
HMM Sc=62.77 Sec struct Sc=19.37
* | * | * | * | * | * | * |
Seq: GCTCCCTTAGCTCAGCTGGAtAGAGCAACTGCCTTCTAAGCAGTCGGtCGATGGTTCGAATCCATCAGGGGGCG
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna18 (1522156-1522227) Length: 72 bp
Type: Val Anticodon: GAC at 33-35 (1522188-1522190) Score: 79.57
HMM Sc=55.36 Sec struct Sc=24.21
* | * | * | * | * | * | * |
Seq: GGGCGATTAGCTCAGAGGTAGAGCACTACCTTGACACGGTAGGAGtCACTGGTTCGATTCCAGTATCGCCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna19 (1623006-1623080) Length: 75 bp
Type: Thr Anticodon: CGT at 33-35 (1623038-1623040) Score: 82.39
HMM Sc=68.24 Sec struct Sc=14.15
* | * | * | * | * | * | * |
Seq: GCCGGTGTAGCTCAGGGGTAGAGCAACTGATTCGTAATCAGTAGGtCGCAGGTTCAATTCCCGTCACCGGCATCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>.>>.......<<.<<<<<<<<<....
Prochlorococcus.trna20 (1762100-1762171) Length: 72 bp
Type: Thr Anticodon: TGT at 33-35 (1762132-1762134) Score: 73.09
HMM Sc=55.16 Sec struct Sc=17.93
* | * | * | * | * | * | * |
Seq: GCCGGCTTAGCTCAGTGGTAGAGCAGCGCTTTTGTAAAGCGAAGGcCATCGGTTCAAATCCGTTAGCCGGCA
Str: >>>>>>>..>>>>.......<<<<..>>>>.......<<<<......>.>>>.......<<<.<<<<<<<<.
Prochlorococcus.trna21 (1778675-1778750) Length: 76 bp
Type: Phe Anticodon: GAA at 34-36 (1778708-1778710) Score: 78.00
HMM Sc=49.30 Sec struct Sc=28.70
* | * | * | * | * | * | * | *
Seq: GCCGGGATAGCTCAGTTGGTAGAGCAGGCGACTGAAAATCGCCGTGtCCCCAGTTCAAATCTGGGTCCTGGCATCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
Prochlorococcus.trna22 (1854201-1854289) Length: 89 bp
Type: Ser Anticodon: GCT at 35-37 (1854235-1854237) Score: 67.55
HMM Sc=39.68 Sec struct Sc=27.87
* | * | * | * | * | * | * | * | *
Seq: GGAGAGGTGGCCGAGTGGTtgAAGGCGGCTCCCTGCTAAGGAGTTACAGGAGGCAACTCTTGtCGAGGGTTCGAATCCCTCCCTCTCCG
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<...>>>>>....<<<<<...>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna23 (1905155-1905227) Length: 73 bp
Type: Ala Anticodon: CGC at 34-36 (1905188-1905190) Score: 76.82
HMM Sc=56.52 Sec struct Sc=20.30
* | * | * | * | * | * | * |
Seq: GGGGAATTAGCTCAGTTGGTAGAGCGCTGTGATCGCACCGCAGAGGtCAGGGGTTCGAATCCCCTATTCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna24 (2101164-2101235) Length: 72 bp
Type: Asn Anticodon: GTT at 33-35 (2101196-2101198) Score: 74.62
HMM Sc=57.64 Sec struct Sc=16.98
* | * | * | * | * | * | * |
Seq: TCCTCGGTAGCTCAGCGGTAGAGCGGTCGACTGTTAATCGATTGGtCGCAGGTTCGAATCCCGCCCGGGGAG
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>.>>.......<<.<<<<<<<<<.
Prochlorococcus.trna25 (2143041-2143115) Length: 75 bp
Type: Val Anticodon: TAC at 33-35 (2143073-2143075) Score: 24.63
Possible pseudogene: HMM Sc=31.87 Sec struct Sc=-7.24
* | * | * | * | * | * | * |
Seq: AGGCGTTTGGCTCAGCGGTAGAAAGCCTGCCTTACAAACACGATCtCGCTGGTTCTATCCCGGCATCGCTAATCA
Str: .>>>>.>....>>.......<<...>.>>.........<<.<.....>>>>>.......<<<<<<.<<<<.....
Prochlorococcus.trna26 (2336700-2336629) Length: 72 bp
Type: Val Anticodon: TAC at 33-35 (2336668-2336666) Score: 87.47
HMM Sc=67.46 Sec struct Sc=20.01
* | * | * | * | * | * | * |
Seq: GGGCGATTAGCTCAGCGGTAGAGCGCCTGCCTTACAAGCAGGATGtCGCTGGTTCGATCCCAGCATCGCCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna27 (2059396-2059323) Length: 74 bp
Type: Arg Anticodon: CCT at 35-37 (2059362-2059360) Score: 84.56
HMM Sc=66.34 Sec struct Sc=18.22
* | * | * | * | * | * | * |
Seq: GGGGCTGTAGCTCAGCCGGAtAGAGCGACGGTTTCCTAAACCGTAGGtCGTGGGTTCGAGTCCCGCCAGCCCCG
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna28 (1974148-1974076) Length: 73 bp
Type: Met Anticodon: CAT at 34-36 (1974115-1974113) Score: 40.01
Possible pseudogene: HMM Sc=8.21 Sec struct Sc=31.80
* | * | * | * | * | * | * |
Seq: GGGGGTCTAGCAATCTGGTgAATGCAGCGAACTCATAATTCGCCTAaGGCGAGTTCGATCCTCGCGACCCCCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna29 (1956763-1956690) Length: 74 bp
Type: Arg Anticodon: ACG at 35-37 (1956729-1956727) Score: 76.73
HMM Sc=55.57 Sec struct Sc=21.16
* | * | * | * | * | * | * |
Seq: GCGCCTGTAGCTCAGCGGAttAGAGCATCTGACTACGGATCAGAGGGtCGGGAGTTCGAATCTCTCCAGGCGCG
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna30 (1921488-1921407) Length: 82 bp
Type: Leu Anticodon: TAG at 35-37 (1921454-1921452) Score: 58.17
HMM Sc=28.97 Sec struct Sc=29.20
* | * | * | * | * | * | * | * |
Seq: GCCCATCTGGCGGAATTGGTaGACGCGCTGGTTTTAGGTACCAGTGGCTTAGGTCGTGGGGGTTCAAGTCCCCCGGTGGGCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna31 (1870470-1870397) Length: 74 bp
Type: Pro Anticodon: CGG at 35-37 (1870436-1870434) Score: 78.95
HMM Sc=54.46 Sec struct Sc=24.49
* | * | * | * | * | * | * |
Seq: CGGGATGTAGCGCAGCTtGGTAGCGCACTTCGTTCGGGACGAAGGGGcCGCAGGTTCGAATCCTGTCATCCCGA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna32 (1831933-1831862) Length: 72 bp
Type: Gln Anticodon: TTG at 33-35 (1831901-1831899) Score: 58.60
HMM Sc=28.69 Sec struct Sc=29.91
* | * | * | * | * | * | * |
Seq: TGGGCCGTCGCCAAGTGGTAAGGCAGCGGGTTTTGGTCTCGCCATtCCTAGGTTCGAATCCTAGCGGCCCAG
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna33 (1817015-1816942) Length: 74 bp
Type: Arg Anticodon: CCG at 35-37 (1816981-1816979) Score: 78.52
HMM Sc=60.00 Sec struct Sc=18.52
* | * | * | * | * | * | * |
Seq: GGGCATGTAGCTCAGTTGGAtAGAGCATCAGATTCCGGTTCTGAGGGtCGGGGGTTCGAGTCCCTCCATGCTCG
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna34 (1800921-1800851) Length: 71 bp
Type: Cys Anticodon: GCA at 33-35 (1800889-1800887) Score: 67.72
HMM Sc=36.91 Sec struct Sc=30.81
* | * | * | * | * | * | * |
Seq: GGCGGCATGGCCAAGTGGTAAGGCAGAGGATTGCAAATCCTTTAtCCCCAGTTCGAATCTGGGTGCCGCCT
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna35 (1751977-1751904) Length: 74 bp
Type: Ile Anticodon: GAT at 35-37 (1751943-1751941) Score: 86.10
HMM Sc=59.20 Sec struct Sc=26.90
* | * | * | * | * | * | * |
Seq: GGGCCATTAGCTCAGGTGGTtAGAGCGCACCCCTGATAAGGGTGAGGtCCCTGGTTCAAGTCCAGGATGGCCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna36 (1751894-1751822) Length: 73 bp
Type: Ala Anticodon: TGC at 34-36 (1751861-1751859) Score: 91.01
HMM Sc=73.87 Sec struct Sc=17.14
* | * | * | * | * | * | * |
Seq: GGGGGTTTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGtCAGCGGTTCGAGTCCGCTAACCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna37 (1689905-1689824) Length: 82 bp
Type: Leu Anticodon: GAG at 35-37 (1689871-1689869) Score: 55.81
HMM Sc=27.60 Sec struct Sc=28.21
* | * | * | * | * | * | * | * |
Seq: GCGGATGTGGTGGAATTGGTaGACACGCACGTTTGAGGGGCGTGTGGCTTCGGCCtTGCGAGTTCAAGTCTCGCCATCCGCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>..<<<...>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna38 (1484588-1484518) Length: 71 bp
Type: Gly Anticodon: TCC at 33-35 (1484556-1484554) Score: 59.75
HMM Sc=43.14 Sec struct Sc=16.61
* | * | * | * | * | * | * |
Seq: GCGGGCGTTGTGTAGTGGTAAGACCTCAGCCTTCCAAGCTGATGACGCGGGTTCGATTCCCGCCGCCCGCT
Str: >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna39 (1129270-1129199) Length: 72 bp
Type: Lys Anticodon: TTT at 33-35 (1129238-1129236) Score: 70.57
HMM Sc=35.90 Sec struct Sc=34.67
* | * | * | * | * | * | * |
Seq: GGGTCGCTAGCTCAGCGGTAGAGCATTCGGCTTTTAACCGACTGGtCCTGCGTTCGAATCGCAGGCGACCCA
Str: >>>>>>>..>>>>.......<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna40 (540526-540453) Length: 74 bp
Type: Pro Anticodon: GGG at 35-37 (540492-540490) Score: 71.10
HMM Sc=48.40 Sec struct Sc=22.70
* | * | * | * | * | * | * |
Seq: CGGGGCGTGGCGCAGCTtGGTAGCGCACTACTTTGGGGTAGTAGGGGtCGTGGGTTCAAATCCCGCCGCTCCGA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna41 (379441-379360) Length: 82 bp
Type: Leu Anticodon: CAA at 35-37 (379407-379405) Score: 68.97
HMM Sc=41.98 Sec struct Sc=26.99
* | * | * | * | * | * | * | * |
Seq: GGGAGCGTGGCGGAATTGGTaGACGCACTGGATTCAAAATCCAGCGCCTTCGGGCATGTGGGTTCAAGTCCCACCGCTCCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>..<<<<..>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna42 (370882-370810) Length: 73 bp
Type: His Anticodon: GTG at 34-36 (370849-370847) Score: 65.02
HMM Sc=44.98 Sec struct Sc=20.04
* | * | * | * | * | * | * |
Seq: GCGGGCGTCGCCAAGTGGTtAAGGCAGCGGCTTGTGGCGCCGCTATtCGGGGGTTCGAATCCCCTCGCTCGCC
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna43 (227908-227824) Length: 85 bp
Type: Tyr Anticodon: GTA at 35-37 (227874-227872) Score: 54.65
HMM Sc=28.17 Sec struct Sc=26.48
* | * | * | * | * | * | * | * |
Seq: GGGTCGGTGCCCGAGTGGTtaATGGGGGCGGACTGTAAATCCGCTGGCTCTGCCTaCGTTGGTTCAAATCCAACCCGGCCCACCT
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<..>.>..<.<...>>>>>.......<<<<<<<<<<<<....
Prochlorococcus.trna44 (227816-227745) Length: 72 bp
Type: Thr Anticodon: GGT at 33-35 (227784-227782) Score: 82.87
HMM Sc=58.18 Sec struct Sc=24.69
* | * | * | * | * | * | * |
Seq: GCCCTTGTAGCTCAGTGGTAGAGCACTCCCTTGGTAAGGGAGAGGtCCCGGGTTCAAATCCCGGCGAGGGCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
Prochlorococcus.trna45 (42353-42282) Length: 72 bp
Type: Gly Anticodon: CCC at 33-35 (42321-42319) Score: 74.79
HMM Sc=49.45 Sec struct Sc=25.34
* | * | * | * | * | * | * |
Seq: GCGGGTGTAATTCAGTGGTAGAATGTCAGCTTCCCAAGCTGAACGtCGCCGGTTCGAATCCGGTCACCCGCT
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
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