Genome Channel Computational Biosciences
HomeAbout UsAnalysis ToolsInformation ResourcesProjects and Research
[space] Gene Channel • Generation Microbial Gene Prediction System • Grail (Microbial Gene Prediction System Internet Link) • GrailEXP • Genome Analysis Pipeline • DomainParser • PROSPECT (PROtein Structure Prediction and Evaluation Computer Toolkit) [space]
-

Taxonomic Distribution of the top KEGG Hits

Based on Blast against KEGG

Kingdom Category Genus/Species Count
    87
Archaea     1
    87
  Euryarchaeota   1
    Uncultured methanogenic archaeon RC-I (rci) 1
Bacteria     1548
  Acidobacteria   2
    Solibacter usitatus (sus) 2
  Actinobacteria   3
    Nocardia farcinica (nfa) 1
    Rubrobacter xylanophilus (rxy) 1
    Salinispora tropica (stp) 1
  Bacteroides   4
    Bacteroides fragilis NCTC9343 (bfs) 1
    Flavobacterium johnsoniae (fjo) 1
    Gramella forsetii (gfo) 1
    Parabacteroides distasonis (pdi) 1
  Chlamydia   1
    Candidatus Protochlamydia amoebophila (pcu) 1
  Cyanobacteria   1467
    Acaryochloris marina (amr) 4
    Anabaena sp. PCC7120 (ana) 3
    Anabaena variabilis (ava) 4
    Cyanobacteria Yellowstone A-Prime (cya) 1
    Gloeobacter violaceus (gvi) 1
    Synechococcus sp. CC9605 (syd) 204
    Synechococcus sp. CC9902 (sye) 219
    Synechococcus elongatus PCC7942 (syf) 5
    Synechococcus sp. CC9311 (syg) 373
    Synechocystis sp. PCC6803 (syn) 7
    Synechococcus sp. RCC307 (syr) 117
    Synechococcus sp. WH8102 (syw) 196
    Synechococcus sp. WH7803 (syx) 323
    Thermosynechococcus elongatus (tel) 3
    Trichodesmium erythraeum (ter) 7
  Firmicutes   17
    Alkaliphilus metalliredigens (amt) 1
    Bacillus halodurans (bha) 2
    Bacillus thuringiensis 97-27 (btk) 1
    Clostridium acetobutylicum (cac) 3
    Clostridium kluyveri (ckl) 1
    Caldicellulosiruptor saccharolyticus (csc) 1
    Clostridium tetani E88 (ctc) 1
    Lactobacillus salivarius (lsl) 1
    Mycoplasma pulmonis (mpu) 1
    Oceanobacillus iheyensis (oih) 1
    Staphylococcus epidermidis RP62A (ser) 1
    Staphylococcus haemolyticus (sha) 1
    Staphylococcus saprophyticus (ssp) 1
    Thermoanaerobacter tengcongensis (tte) 1
  Fusobacteria   1
    Fusobacterium nucleatum (fnu) 1
  Green nonsulfur bacteria   1
    Roseiflexus castenholzii DSM13941 (rca) 1
  Green sulfur bacteria   4
    Chlorobium chlorochromatii (cch) 1
    Chlorobium phaeobacteroides (cph) 1
    Chlorobaculum tepidum (cte) 1
    Prosthecochloris vibrioformis (pvi) 1
  Hyperthermophilic bacteria   3
    Petrotoga mobilis (pmo) 1
    Thermosipho melanesiensis (tme) 2
  Planctomyces   1
    Rhodopirellula baltica (rba) 1
  Proteobacteria   41
    Acinetobacter baumannii (acb) 1
    Agrobacterium tumefaciens C58 (UWash/Dupont) (atu) 1
    Bradyrhizobium sp. BTAi1 (bbt) 8
    Bradyrhizobium japonicum (bja) 2
    Coxiella burnetii Dugway 7E9-12 (cbd) 1
    Coxiella burnetii RSA 493 (cbu) 1
    Delftia acidovorans (dac) 1
    Candidatus Desulfococcus oleovorans (dol) 1
    Erythrobacter litoralis (eli) 1
    Francisella tularensis subsp. novicida U112 (ftn) 1
    Hahella chejuensis (hch) 1
    Minibacterium massiliensis (mms) 1
    Neisseria gonorrhoeae (ngo) 1
    Nitrosococcus oceani (noc) 1
    Psychrobacter arcticum (par) 1
    Psychromonas ingrahamii (pin) 1
    Psychrobacter sp. PRwf-1 (prw) 1
    Candidatus Pelagibacter ubique (pub) 2
    Rhizobium etli (ret) 1
    Rhizobium leguminosarum (rle) 1
    Ralstonia metallidurans (rme) 1
    Rhodopseudomonas palustris HaA2 (rpb) 1
    Rhodopseudomonas palustris BisB18 (rpc) 1
    Rhodospirillum rubrum (rru) 3
    Syntrophus aciditrophicus (sat) 1
    Shewanella sp. MR-4 (she) 1
    Shewanella sp. ANA-3 (shn) 1
    Silicibacter sp. TM1040 (sit) 1
    Thiomicrospira crunogena (tcx) 1
    Thiomicrospira denitrificans (tdn) 1
  Spirochete   3
    Leptospira interrogans serovar Copenhageni (lic) 3
Eukaryotes     13
  Animals   2
    Bos taurus (cow) (bta) 1
    Mus musculus (mouse) (mmu) 1
  Plants   5
    Arabidopsis thaliana (thale cress) (ath) 1
    Cyanidioschyzon merolae (cme) 1
    Ostreococcus lucimarinus (olu) 3
  Protists   6
    Plasmodium falciparum (pfa) 4
    Tetrahymena thermophila (tet) 2
NULL     277
TOTAL     1926

-
SiteMap      Feedback      Life Sciences Division      ORNL     Disclaimer     Webmaster