Genome Channel Computational Biosciences
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Intracellular trafficking and secretion

COG Name Group Contig Gene COG ID Score Evalue
Competence protein ComGC U Contig1 OEOE1255 COG4537 76 6e-16
Competence protein ComGF U Contig1 OEOE1252 COG4940 33 0.008

FLAGELLUM STRUCTURE AND BIOGENESIS

COG Name Group Contig Gene COG ID Score Evalue
Flagellar biosynthesis/type III secretory pathway ATPase U Contig1 OEOE0663 COG1157 222 4e-59
Flagellar biosynthesis/type III secretory pathway ATPase U Contig1 OEOE0665 COG1157 243 3e-65
Muramidase (flagellum-specific) U Contig1 OEOE0416 COG1705 145 3e-36
Muramidase (flagellum-specific) U Contig1 OEOE1199 COG1705 134 1e-32
Muramidase (flagellum-specific) U Contig1 OEOE1247 COG1705 154 1e-38
Muramidase (flagellum-specific) U Contig1 OEOE1734 COG1705 101 4e-23
Predicted ATPase involved in biogenesis of flagella U Contig1 OEOE0318 COG2874 51 3e-07
Predicted ATPase involved in biogenesis of flagella U Contig1 OEOE1382 COG2874 41 1e-04
COG Name Group Contig Gene COG ID Score Evalue
Flp pilus assembly protein ATPase CpaE U Contig1 OEOE0113 COG4963 57 2e-09
Flp pilus assembly protein ATPase CpaE U Contig1 OEOE1505 COG4963 41 2e-04
Flp pilus assembly protein TadD contains TPR repeats U Contig1 OEOE1011 COG5010 40 2e-04
Periplasmic serine protease (ClpP class) U Contig1 OEOE0570 COG0616 48 5e-07
Predicted ABC-type exoprotein transport system permease component U Contig1 OEOE1273 COG4473 105 5e-24
Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake U Contig1 OEOE1020 COG0758 241 7e-65
Preprotein translocase subunit Sec63 U Contig1 OEOE1308 COG5407 63 3e-11

PREPROTEIN TRANSLOCASE SUBUNITS

COG Name Group Contig Gene COG ID Score Evalue
Preprotein translocase subunit SecA (ATPase RNA helicase) U Contig1 OEOE1321 COG0653 945 0.0
Preprotein translocase subunit SecE U Contig1 OEOE1423 COG0690 41 2e-05
Preprotein translocase subunit SecG U Contig1 OEOE0405 COG1314 46 7e-07
Preprotein translocase subunit SecY U Contig1 OEOE0614 COG0201 361 1.0e-101
Preprotein translocase subunit YajC U Contig1 OEOE1288 COG1862 64 3e-12
Preprotein translocase subunit YidC U Contig1 OEOE0914 COG0706 119 4e-28
Preprotein translocase subunit YidC U Contig1 OEOE1862 COG0706 154 6e-39
COG Name Group Contig Gene COG ID Score Evalue
Protease subunit of ATP-dependent Clp protease U Contig1 OEOE0570 COG0740 253 6e-69
Signal peptidase I U Contig1 OEOE1333 COG0681 50 1e-07
Signal peptidase I U Contig1 OEOE1860 COG0681 45 3e-06
Signal peptidase I U Contig1 OEOE1861 COG0681 52 4e-08
Signal recognition particle GTPase U Contig1 OEOE0455 COG0552 360 1.0e-101
Signal recognition particle GTPase U Contig1 OEOE0455 COG0541 229 3e-61
Signal recognition particle GTPase U Contig1 OEOE0457 COG0552 232 7e-62
Signal recognition particle GTPase U Contig1 OEOE0457 COG0541 578 1.0e-166
Signal recognition particle GTPase U Contig1 OEOE0722 COG0552 36 0.004
Signal recognition particle GTPase U Contig1 OEOE1598 COG0552 36 0.002
Tfp pilus assembly protein ATPase PilM U Contig1 OEOE0668 COG4972 40 3e-04
Tfp pilus assembly protein ATPase PilM U Contig1 OEOE1144 COG4972 75 1e-14
Tfp pilus assembly protein FimT U Contig1 OEOE1255 COG4970 38 2e-04
Tfp pilus assembly protein FimV U Contig1 OEOE0805 COG3170 39 6e-04
Tfp pilus assembly protein PilE U Contig1 OEOE1255 COG4968 40 3e-05
Tfp pilus assembly protein PilF U Contig1 OEOE1011 COG3063 43 5e-05
Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB U Contig1 OEOE1345 COG2804 42 1e-04
Type II secretory pathway component ExeA (predicted ATPase) U Contig1 OEOE0578 COG3267 36 0.003
Type II secretory pathway component PulF U Contig1 OEOE1256 COG1459 141 7e-35
Type II secretory pathway pseudopilin PulG U Contig1 OEOE1252 COG2165 35 0.002
Type II secretory pathway pseudopilin PulG U Contig1 OEOE1255 COG2165 45 2e-06
Type IV secretory pathway protease TraF U Contig1 OEOE1333 COG4959 44 7e-06
Type IV secretory pathway TrbL protein U Contig1 OEOE0865 COG3846 33 0.008
Type IV secretory pathway VirB11 protein involved in flagella biosynthesis U Contig1 OEOE1379 COG0630 36 0.008
Type IV secretory pathway VirB11 protein involved in flagella biosynthesis U Contig1 OEOE1711 COG0630 36 0.009
Type IV secretory pathway VirB4 protein U Contig1 OEOE1456 COG3451 40 3e-04

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