Transcription

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
AraC-type DNA-binding domain-containing protein	K	Contig1	OEOE0100	COG2207	88	6e-19
AraC-type DNA-binding domain-containing protein	K	Contig1	OEOE0209	COG2207	86	3e-18
AraC-type DNA-binding domain-containing protein	K	Contig1	OEOE0754	COG2207	74	2e-14
AraC-type DNA-binding domain-containing protein	K	Contig1	OEOE1455	COG2207	80	2e-16
AraC-type DNA-binding domain-containing protein	K	Contig1	OEOE1507	COG2207	84	2e-17
AraC-type DNA-binding domain-containing protein	K	Contig1	OEOE1572	COG2207	85	7e-18
AraC-type DNA-binding domain-containing protein	K	Contig1	OEOE1575	COG2207	95	7e-21
AraC-type DNA-binding domain-containing protein	K	Contig1	OEOE1830	COG2207	45	5e-06

BASAL TRANSCRIPTION FACTORS

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Predicted transcription factor homolog of eukaryotic MBF1	K	Contig1	OEOE0047	COG1813	41	7e-05
Predicted transcription factor homolog of eukaryotic MBF1	K	Contig1	OEOE0099	COG1813	51	7e-08
Transcription antiterminator	K	Contig1	OEOE1422	COG0250	165	2e-42
Transcription elongation factor	K	Contig1	OEOE0430	COG0195	169	4e-43
Transcription elongation factor	K	Contig1	OEOE1246	COG0782	146	7e-37
Transcription termination factor	K	Contig1	OEOE0663	COG1158	43	5e-05
Transcription termination factor	K	Contig1	OEOE0665	COG1158	50	4e-07
Transcription termination factor	K	Contig1	OEOE1238	COG0781	91	2e-20

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Biotin operon repressor	K	Contig1	OEOE0232	COG1654	35	0.010
Biotin operon repressor	K	Contig1	OEOE1596	COG1654	59	5e-10
CCR4-NOT transcriptional regulation complex NOT5 subunit	K	Contig1	OEOE1199	COG5665	38	0.001
CCR4-NOT transcriptional regulation complex NOT5 subunit	K	Contig1	OEOE1430	COG5665	37	0.002
Cold shock protein	K	Contig1	OEOE1376	COG1278	101	1e-23
DNA-binding winged-HTH domains	K	Contig1	OEOE0105	COG3710	59	3e-10
DNA-binding winged-HTH domains	K	Contig1	OEOE0119	COG3710	63	2e-11
DNA-binding winged-HTH domains	K	Contig1	OEOE0142	COG3710	58	5e-10
DNA-binding winged-HTH domains	K	Contig1	OEOE0488	COG3710	52	6e-08
DNA-binding winged-HTH domains	K	Contig1	OEOE1773	COG3710	46	2e-06

DNA-DEPENDENT RNA POLYMERASE SUBUNITS

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
DNA-directed RNA polymerase alpha subunit/40 kD subunit	K	Contig1	OEOE0620	COG0202	317	9e-88
DNA-directed RNA polymerase beta subunit/140 kD subunit	K	Contig1	OEOE1375	COG0085	1121	0.0
DNA-directed RNA polymerase beta' subunit/160 kD subunit	K	Contig1	OEOE1374	COG0086	826	0.0
DNA-directed RNA polymerase delta subunit	K	Contig1	OEOE1788	COG3343	51	6e-08
DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)	K	Contig1	OEOE0996	COG0568	341	6e-95
DNA-directed RNA polymerase specialized sigma subunit	K	Contig1	OEOE0996	COG1191	122	5e-29
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog	K	Contig1	OEOE1424	COG1595	36	0.002
DNA-directed RNA polymerase subunit E'	K	Contig1	OEOE1439	COG1095	57	4e-09
DNA-directed RNA polymerase subunit K/omega	K	Contig1	OEOE1230	COG1758	32	0.008

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
DNA helicase TIP49 TBP-interacting protein	K	Contig1	OEOE0188	COG1224	48	3e-06
DNA helicase TIP49 TBP-interacting protein	K	Contig1	OEOE0572	COG1224	38	0.003
DNA helicase TIP49 TBP-interacting protein	K	Contig1	OEOE0578	COG1224	44	1e-05
DNA helicase TIP49 TBP-interacting protein	K	Contig1	OEOE1410	COG1224	42	1e-04
DNA helicase TIP49 TBP-interacting protein	K	Contig1	OEOE1729	COG1224	37	0.003
DNA or RNA helicase of superfamily II	K	Contig1	OEOE0183	COG1061	57	9e-09
DNA or RNA helicase of superfamily II	K	Contig1	OEOE0372	COG1061	58	2e-09
DNA or RNA helicase of superfamily II	K	Contig1	OEOE0449	COG1061	57	3e-09
DNA or RNA helicase of superfamily II	K	Contig1	OEOE0786	COG1061	47	5e-06
DNA or RNA helicase of superfamily II	K	Contig1	OEOE1285	COG1061	47	3e-06
DNA or RNA helicase of superfamily II	K	Contig1	OEOE1643	COG1061	62	1e-10
dsRNA-specific ribonuclease	K	Contig1	OEOE0453	COG0571	212	3e-56
Exoribonuclease II	K	Contig1	OEOE1439	COG4776	200	4e-52
Exoribonuclease R	K	Contig1	OEOE1228	COG0557	37	4e-04
Exoribonuclease R	K	Contig1	OEOE1439	COG0557	613	1.0e-176
Guanosine polyphosphate pyrophosphohydrolase/synthetase	K	Contig1	OEOE0587	COG0317	836	0.0
Guanosine polyphosphate pyrophosphohydrolase/synthetase	K	Contig1	OEOE0944	COG0317	36	7e-04
NAD-dependent protein deacetylase SIR2 family	K	Contig1	OEOE1797	COG0846	176	2e-45
Nucleosome binding factor SPN SPT16 subunit	K	Contig1	OEOE0574	COG5406	47	3e-06
Nucleosome binding factor SPN SPT16 subunit	K	Contig1	OEOE0959	COG5406	45	5e-06
Nucleosome binding factor SPN SPT16 subunit	K	Contig1	OEOE1788	COG5406	34	0.006
Predicted nucleic-acid-binding protein implicated in transcription termination	K	Contig1	OEOE0431	COG2740	79	6e-17
Predicted RNA-binding protein homologous to eukaryotic snRNP	K	Contig1	OEOE1077	COG1293	359	1.0e-100
Predicted transcriptional regulator protein containing CBS domains	K	Contig1	OEOE0137	COG4109	51	2e-07
Predicted transcriptional regulator protein	K	Contig1	OEOE0480	COG4742	36	7e-04
Predicted transcriptional regulator protein	K	Contig1	OEOE0480	COG4189	39	9e-05
Predicted transcriptional regulator protein	K	Contig1	OEOE0970	COG4189	35	0.006
RecG-like helicase	K	Contig1	OEOE0183	COG1200	356	8e-99
RecG-like helicase	K	Contig1	OEOE0372	COG1200	51	4e-07
RecG-like helicase	K	Contig1	OEOE0449	COG1200	734	0.0
RecG-like helicase	K	Contig1	OEOE0786	COG1200	71	3e-13
RecG-like helicase	K	Contig1	OEOE0794	COG1200	38	0.002
RecG-like helicase	K	Contig1	OEOE1285	COG1200	67	3e-12
RecG-like helicase	K	Contig1	OEOE1643	COG1200	38	0.002
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain	K	Contig1	OEOE0105	COG4567	58	4e-10
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain	K	Contig1	OEOE0119	COG4567	56	2e-09
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain	K	Contig1	OEOE0142	COG4567	57	2e-09
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain	K	Contig1	OEOE0488	COG4567	63	1e-11
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain	K	Contig1	OEOE0885	COG4567	38	0.001
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain	K	Contig1	OEOE1773	COG4567	61	8e-11
Response regulator containing a CheY-like receiver domain and an HD-GYP domain	K	Contig1	OEOE0105	COG3437	92	3e-20
Response regulator containing a CheY-like receiver domain and an HD-GYP domain	K	Contig1	OEOE0119	COG3437	93	2e-20
Response regulator containing a CheY-like receiver domain and an HD-GYP domain	K	Contig1	OEOE0142	COG3437	90	2e-19
Response regulator containing a CheY-like receiver domain and an HD-GYP domain	K	Contig1	OEOE0488	COG3437	81	5e-17
Response regulator containing a CheY-like receiver domain and an HD-GYP domain	K	Contig1	OEOE0885	COG3437	58	4e-10
Response regulator containing a CheY-like receiver domain and an HD-GYP domain	K	Contig1	OEOE1773	COG3437	95	5e-21
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	K	Contig1	OEOE0105	COG2197	81	7e-17
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	K	Contig1	OEOE0119	COG2197	75	6e-15
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	K	Contig1	OEOE0142	COG2197	75	4e-15
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	K	Contig1	OEOE0488	COG2197	77	1e-15
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	K	Contig1	OEOE0885	COG2197	75	5e-15
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	K	Contig1	OEOE1773	COG2197	81	6e-17
Response regulator of citrate/malate metabolism	K	Contig1	OEOE0105	COG4565	71	1e-13
Response regulator of citrate/malate metabolism	K	Contig1	OEOE0119	COG4565	67	1e-12
Response regulator of citrate/malate metabolism	K	Contig1	OEOE0142	COG4565	59	2e-10
Response regulator of citrate/malate metabolism	K	Contig1	OEOE0488	COG4565	66	3e-12
Response regulator of citrate/malate metabolism	K	Contig1	OEOE0885	COG4565	66	3e-12
Response regulator of citrate/malate metabolism	K	Contig1	OEOE1773	COG4565	80	1e-16
Response regulator of the LytR/AlgR family	K	Contig1	OEOE0105	COG3279	63	2e-11
Response regulator of the LytR/AlgR family	K	Contig1	OEOE0119	COG3279	53	2e-08
Response regulator of the LytR/AlgR family	K	Contig1	OEOE0142	COG3279	58	6e-10
Response regulator of the LytR/AlgR family	K	Contig1	OEOE0488	COG3279	54	7e-09
Response regulator of the LytR/AlgR family	K	Contig1	OEOE0724	COG3279	53	6e-09
Response regulator of the LytR/AlgR family	K	Contig1	OEOE0885	COG3279	169	2e-43
Response regulator of the LytR/AlgR family	K	Contig1	OEOE1773	COG3279	63	2e-11
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	K	Contig1	OEOE0105	COG0745	240	9e-65
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	K	Contig1	OEOE0119	COG0745	225	2e-60
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	K	Contig1	OEOE0142	COG0745	194	6e-51
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	K	Contig1	OEOE0488	COG0745	208	4e-55
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	K	Contig1	OEOE0885	COG0745	66	3e-12
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	K	Contig1	OEOE1773	COG0745	188	2e-49
Serine/threonine protein kinase	K	Contig1	OEOE0789	COG0515	166	4e-42
SOS-response transcriptional repressors (RecA-mediated autopeptidase)	K	Contig1	OEOE0970	COG1974	180	7e-47
Sugar diacid utilization regulator	K	Contig1	OEOE0965	COG3835	37	0.002
Superfamily II DNA and RNA helicase	K	Contig1	OEOE0183	COG0513	59	1e-09
Superfamily II DNA and RNA helicase	K	Contig1	OEOE0372	COG0513	66	1e-11
Superfamily II DNA and RNA helicase	K	Contig1	OEOE0449	COG0513	74	4e-14
Superfamily II DNA and RNA helicase	K	Contig1	OEOE0786	COG0513	52	2e-07
Superfamily II DNA and RNA helicase	K	Contig1	OEOE1285	COG0513	330	9e-92
Superfamily II DNA and RNA helicase	K	Contig1	OEOE1643	COG0513	417	1.0e-117
Transcriptional accessory protein	K	Contig1	OEOE0962	COG2183	56	9e-10
Transcriptional accessory protein	K	Contig1	OEOE1228	COG2183	58	3e-10
Transcriptional accessory protein	K	Contig1	OEOE1439	COG2183	41	2e-04
Transcriptional activator of acetoin/glycerol metabolism	K	Contig1	OEOE0514	COG3284	39	0.001
Transcriptional activator of acetoin/glycerol metabolism	K	Contig1	OEOE1729	COG3284	38	0.001
Transcriptional antiterminator	K	Contig1	OEOE0232	COG3933	39	0.001
Transcriptional antiterminator	K	Contig1	OEOE0232	COG3711	84	3e-17
Transcriptional antiterminator	K	Contig1	OEOE1484	COG3933	41	3e-04
Transcriptional antiterminator	K	Contig1	OEOE1484	COG3711	120	2e-28
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain	K	Contig1	OEOE0100	COG4977	75	8e-15
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain	K	Contig1	OEOE0209	COG4977	88	7e-19
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain	K	Contig1	OEOE0754	COG4977	55	8e-09
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain	K	Contig1	OEOE1134	COG4977	40	1e-04
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain	K	Contig1	OEOE1455	COG4977	73	5e-14
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain	K	Contig1	OEOE1507	COG4977	70	2e-13
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain	K	Contig1	OEOE1572	COG4977	75	1e-14
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain	K	Contig1	OEOE1575	COG4977	93	4e-20

TRANSCRIPTIONAL REGULATORS

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
ATP-dependent transcriptional regulator protein	K	Contig1	OEOE0318	COG2909	36	0.006
Mn-dependent transcriptional regulator protein	K	Contig1	OEOE0540	COG1321	33	0.008
Mn-dependent transcriptional regulator protein	K	Contig1	OEOE0970	COG1321	36	0.002
Mn-dependent transcriptional regulator protein	K	Contig1	OEOE1297	COG1321	37	7e-04
Mn-dependent transcriptional regulator protein	K	Contig1	OEOE1346	COG1321	43	1e-05
Mn-dependent transcriptional regulator protein	K	Contig1	OEOE1594	COG1321	35	0.003
Predicted transcriptional regulator protein containing the HTH domain	K	Contig1	OEOE1005	COG1386	153	6e-39
Predicted transcriptional regulator protein	K	Contig1	OEOE0047	COG2944	38	4e-04
Predicted transcriptional regulator protein	K	Contig1	OEOE0047	COG1396	48	6e-07
Predicted transcriptional regulator protein	K	Contig1	OEOE0047	COG1395	39	3e-04
Predicted transcriptional regulator protein	K	Contig1	OEOE0047	COG1476	47	8e-07
Predicted transcriptional regulator protein	K	Contig1	OEOE0062	COG2865	175	5e-45
Predicted transcriptional regulator protein	K	Contig1	OEOE0079	COG0789	83	4e-18
Predicted transcriptional regulator protein	K	Contig1	OEOE0082	COG3355	34	0.004
Predicted transcriptional regulator protein	K	Contig1	OEOE0099	COG2944	41	4e-05
Predicted transcriptional regulator protein	K	Contig1	OEOE0099	COG1396	41	6e-05
Predicted transcriptional regulator protein	K	Contig1	OEOE0099	COG3620	35	0.004
Predicted transcriptional regulator protein	K	Contig1	OEOE0099	COG1395	35	0.004
Predicted transcriptional regulator protein	K	Contig1	OEOE0099	COG1476	46	2e-06
Predicted transcriptional regulator protein	K	Contig1	OEOE0115	COG1475	155	5e-39
Predicted transcriptional regulator protein	K	Contig1	OEOE0137	COG2524	54	2e-08
Predicted transcriptional regulator protein	K	Contig1	OEOE0226	COG1725	57	2e-09
Predicted transcriptional regulator protein	K	Contig1	OEOE0480	COG0640	55	2e-09
Predicted transcriptional regulator protein	K	Contig1	OEOE0480	COG1777	35	0.002
Predicted transcriptional regulator protein	K	Contig1	OEOE0522	COG1695	64	2e-12
Predicted transcriptional regulator protein	K	Contig1	OEOE0540	COG1497	35	0.003
Predicted transcriptional regulator protein	K	Contig1	OEOE0694	COG1959	72	2e-14
Predicted transcriptional regulator protein	K	Contig1	OEOE0702	COG0789	58	2e-10
Predicted transcriptional regulator protein	K	Contig1	OEOE0878	COG0789	37	9e-04
Predicted transcriptional regulator protein	K	Contig1	OEOE0916	COG1733	78	1e-16
Predicted transcriptional regulator protein	K	Contig1	OEOE0926	COG0640	47	1e-06
Predicted transcriptional regulator protein	K	Contig1	OEOE0951	COG0789	47	3e-07
Predicted transcriptional regulator protein	K	Contig1	OEOE0970	COG2932	46	2e-06
Predicted transcriptional regulator protein	K	Contig1	OEOE1211	COG1725	55	4e-09
Predicted transcriptional regulator protein	K	Contig1	OEOE1297	COG2345	38	5e-04
Predicted transcriptional regulator protein	K	Contig1	OEOE1331	COG3620	46	3e-06
Predicted transcriptional regulator protein	K	Contig1	OEOE1331	COG2524	60	2e-10
Predicted transcriptional regulator protein	K	Contig1	OEOE1339	COG1725	49	3e-07
Predicted transcriptional regulator protein	K	Contig1	OEOE1346	COG2345	39	2e-04
Predicted transcriptional regulator protein	K	Contig1	OEOE1467	COG1725	52	3e-08
Predicted transcriptional regulator protein	K	Contig1	OEOE1530	COG1396	36	8e-04
Predicted transcriptional regulator protein	K	Contig1	OEOE1530	COG1476	33	0.008
Predicted transcriptional regulator protein	K	Contig1	OEOE1648	COG3682	84	4e-18
Predicted transcriptional regulator protein	K	Contig1	OEOE1727	COG1725	60	1e-10
Predicted transcriptional regulator protein	K	Contig1	OEOE1803	COG1725	90	3e-20
Predicted transcriptional regulator protein	K	Contig1	OEOE1826	COG0789	55	7e-09
Predicted transcriptional regulator protein	K	Contig1	OEOE1861	COG2932	41	7e-05
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains	K	Contig1	OEOE0106	COG3829	41	2e-04
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains	K	Contig1	OEOE0188	COG3829	38	0.002
Transcriptional regulator contains sigma factor-related N-terminal domain	K	Contig1	OEOE0417	COG2390	200	8e-53
Transcriptional regulator	K	Contig1	OEOE0045	COG1309	59	3e-10
Transcriptional regulator	K	Contig1	OEOE0096	COG1309	42	3e-05
Transcriptional regulator	K	Contig1	OEOE0179	COG1309	72	2e-14
Transcriptional regulator	K	Contig1	OEOE0215	COG1309	51	5e-08
Transcriptional regulator	K	Contig1	OEOE0245	COG1309	61	5e-11
Transcriptional regulator	K	Contig1	OEOE0395	COG1309	63	2e-11
Transcriptional regulator	K	Contig1	OEOE0412	COG0583	149	3e-37
Transcriptional regulator	K	Contig1	OEOE0435	COG1316	169	4e-43
Transcriptional regulator	K	Contig1	OEOE0532	COG1309	39	3e-04
Transcriptional regulator	K	Contig1	OEOE0548	COG0583	99	4e-22
Transcriptional regulator	K	Contig1	OEOE0733	COG1309	40	1e-04
Transcriptional regulator	K	Contig1	OEOE0736	COG1309	61	7e-11
Transcriptional regulator	K	Contig1	OEOE0758	COG1309	59	3e-10
Transcriptional regulator	K	Contig1	OEOE0970	COG1414	40	2e-04
Transcriptional regulator	K	Contig1	OEOE1045	COG0583	106	2e-24
Transcriptional regulator	K	Contig1	OEOE1175	COG0583	143	1e-35
Transcriptional regulator	K	Contig1	OEOE1180	COG1309	60	1e-10
Transcriptional regulator	K	Contig1	OEOE1184	COG0583	125	4e-30
Transcriptional regulator	K	Contig1	OEOE1297	COG1414	41	4e-05
Transcriptional regulator	K	Contig1	OEOE1565	COG0583	129	2e-31
Transcriptional regulator	K	Contig1	OEOE1685	COG1309	52	3e-08
Transcriptional regulator	K	Contig1	OEOE1710	COG1309	50	1e-07
Transcriptional regulator	K	Contig1	OEOE1732	COG1316	168	3e-43
Transcriptional regulator	K	Contig1	OEOE1823	COG0583	140	1e-34
Transcriptional regulator of a riboflavin/FAD biosynthetic operon	K	Contig1	OEOE0540	COG1339	35	0.002
Transcriptional regulator of a riboflavin/FAD biosynthetic operon	K	Contig1	OEOE1297	COG1339	36	0.002
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs	K	Contig1	OEOE0226	COG1167	50	3e-07
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs	K	Contig1	OEOE0333	COG1167	160	1e-40
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs	K	Contig1	OEOE0411	COG1167	337	8e-94
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs	K	Contig1	OEOE0777	COG1167	153	1e-38
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs	K	Contig1	OEOE0894	COG1167	133	3e-32
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs	K	Contig1	OEOE0895	COG1167	152	3e-38
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs	K	Contig1	OEOE1211	COG1167	55	3e-09
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs	K	Contig1	OEOE1339	COG1167	50	2e-07
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs	K	Contig1	OEOE1467	COG1167	45	3e-06
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs	K	Contig1	OEOE1727	COG1167	56	3e-09
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs	K	Contig1	OEOE1803	COG1167	61	3e-11
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain	K	Contig1	OEOE0188	COG1221	38	0.002
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain	K	Contig1	OEOE0514	COG1221	41	3e-04
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain	K	Contig1	OEOE0572	COG1221	42	1e-04
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain	K	Contig1	OEOE0578	COG1221	38	7e-04
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain	K	Contig1	OEOE0640	COG1221	45	2e-05
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain	K	Contig1	OEOE1192	COG1221	43	4e-05
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain	K	Contig1	OEOE1729	COG1221	37	0.004
Transcriptional regulators	K	Contig1	OEOE0038	COG1737	45	5e-06
Transcriptional regulators	K	Contig1	OEOE0042	COG1609	254	7e-69
Transcriptional regulators	K	Contig1	OEOE0082	COG1846	55	3e-09
Transcriptional regulators	K	Contig1	OEOE0125	COG1609	152	2e-38
Transcriptional regulators	K	Contig1	OEOE0132	COG1737	95	2e-21
Transcriptional regulators	K	Contig1	OEOE0146	COG1609	248	4e-67
Transcriptional regulators	K	Contig1	OEOE0225	COG1737	146	2e-36
Transcriptional regulators	K	Contig1	OEOE0226	COG1802	44	1e-05
Transcriptional regulators	K	Contig1	OEOE0226	COG2188	82	6e-17
Transcriptional regulators	K	Contig1	OEOE0226	COG2186	63	4e-11
Transcriptional regulators	K	Contig1	OEOE0226	COG1609	191	7e-50
Transcriptional regulators	K	Contig1	OEOE0302	COG1609	184	7e-48
Transcriptional regulators	K	Contig1	OEOE0497	COG1846	41	2e-05
Transcriptional regulators	K	Contig1	OEOE0501	COG1846	46	1e-06
Transcriptional regulators	K	Contig1	OEOE0540	COG1846	45	2e-06
Transcriptional regulators	K	Contig1	OEOE0635	COG1737	48	2e-06
Transcriptional regulators	K	Contig1	OEOE0684	COG1609	271	5e-74
Transcriptional regulators	K	Contig1	OEOE0728	COG1846	41	3e-05
Transcriptional regulators	K	Contig1	OEOE0808	COG1609	209	2e-55
Transcriptional regulators	K	Contig1	OEOE0970	COG1846	40	1e-04
Transcriptional regulators	K	Contig1	OEOE1076	COG1846	42	1e-05
Transcriptional regulators	K	Contig1	OEOE1211	COG1802	50	1e-07
Transcriptional regulators	K	Contig1	OEOE1211	COG2188	182	2e-47
Transcriptional regulators	K	Contig1	OEOE1211	COG2186	65	7e-12
Transcriptional regulators	K	Contig1	OEOE1297	COG1846	71	5e-14
Transcriptional regulators	K	Contig1	OEOE1297	COG1522	33	0.009
Transcriptional regulators	K	Contig1	OEOE1331	COG1737	78	1e-15
Transcriptional regulators	K	Contig1	OEOE1339	COG1802	49	3e-07
Transcriptional regulators	K	Contig1	OEOE1339	COG2188	164	5e-42
Transcriptional regulators	K	Contig1	OEOE1339	COG2186	63	2e-11
Transcriptional regulators	K	Contig1	OEOE1346	COG1846	59	2e-10
Transcriptional regulators	K	Contig1	OEOE1467	COG1802	47	1e-06
Transcriptional regulators	K	Contig1	OEOE1467	COG2188	123	1e-29
Transcriptional regulators	K	Contig1	OEOE1467	COG2186	64	1e-11
Transcriptional regulators	K	Contig1	OEOE1524	COG1737	227	7e-61
Transcriptional regulators	K	Contig1	OEOE1594	COG1846	55	2e-09
Transcriptional regulators	K	Contig1	OEOE1596	COG2186	37	0.002
Transcriptional regulators	K	Contig1	OEOE1668	COG1609	222	2e-59
Transcriptional regulators	K	Contig1	OEOE1727	COG1802	52	5e-08
Transcriptional regulators	K	Contig1	OEOE1727	COG2188	205	2e-54
Transcriptional regulators	K	Contig1	OEOE1727	COG2186	69	4e-13
Transcriptional regulators	K	Contig1	OEOE1765	COG1846	51	4e-08
Transcriptional regulators	K	Contig1	OEOE1803	COG2188	60	5e-11
Transcriptional regulators	K	Contig1	OEOE1803	COG2186	47	3e-07
Transcriptional regulators	K	Contig1	OEOE1854	COG1846	43	8e-06
Transcriptional regulators of sugar metabolism	K	Contig1	OEOE0159	COG1349	39	2e-04
Transcriptional regulators of sugar metabolism	K	Contig1	OEOE0226	COG1349	35	0.007
Transcriptional regulators of sugar metabolism	K	Contig1	OEOE1329	COG1349	34	0.007
Transcriptional regulators of sugar metabolism	K	Contig1	OEOE1611	COG1349	37	0.001
Transcriptional regulator/sugar kinase	K	Contig1	OEOE0920	COG1940	235	4e-63
Transcriptional regulator/sugar kinase	K	Contig1	OEOE1421	COG1940	37	0.003
Transcriptional regulator/sugar kinase	K	Contig1	OEOE1708	COG1940	127	6e-31

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Transcriptional repressor of class III stress genes	K	Contig1	OEOE0513	COG4463	149	8e-38
Transcription-repair coupling factor (superfamily II helicase)	K	Contig1	OEOE0183	COG1197	1112	0.0
Transcription-repair coupling factor (superfamily II helicase)	K	Contig1	OEOE0372	COG1197	131	2e-31
Transcription-repair coupling factor (superfamily II helicase)	K	Contig1	OEOE0449	COG1197	340	2e-94
Transcription-repair coupling factor (superfamily II helicase)	K	Contig1	OEOE0786	COG1197	64	5e-11

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