Genome Channel Computational Biosciences
HomeAbout UsAnalysis ToolsInformation ResourcesProjects and Research
[space] Gene Channel • Generation Microbial Gene Prediction System • Grail (Microbial Gene Prediction System Internet Link) • GrailEXP • Genome Analysis Pipeline • DomainParser • PROSPECT (PROtein Structure Prediction and Evaluation Computer Toolkit) [space]
-

Lipid Metabolism

COG Name Group Contig Gene COG ID Score Evalue
1-acyl-sn-glycerol-3-phosphate acyltransferase I Contig1 OEOE0973 COG0204 77 6e-16
3-hydroxy-3-methylglutaryl CoA synthase I Contig1 OEOE0968 COG3425 335 3e-93
3-hydroxy-3-methylglutaryl CoA synthase I Contig1 OEOE1593 COG3425 78 7e-16
3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase I Contig1 OEOE0244 COG2084 49 2e-07
3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase I Contig1 OEOE0266 COG2084 280 1e-76
3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase I Contig1 OEOE0564 COG2084 42 5e-05
3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase I Contig1 OEOE0892 COG2084 93 6e-20
3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase I Contig1 OEOE1523 COG2084 102 3e-23
3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase I Contig1 OEOE1737 COG2084 40 4e-04
3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase I Contig1 OEOE1586 COG0764 168 2e-43
3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase I Contig1 OEOE1595 COG0764 102 9e-24
Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta) I Contig1 OEOE1583 COG4799 69 2e-13
Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta) I Contig1 OEOE1584 COG4799 62 6e-11
Acetyl/propionyl-CoA carboxylase alpha subunit I Contig1 OEOE0261 COG4770 62 2e-10
Acetyl/propionyl-CoA carboxylase alpha subunit I Contig1 OEOE0330 COG4770 44 2e-05
Acetyl/propionyl-CoA carboxylase alpha subunit I Contig1 OEOE0672 COG4770 45 1e-05
Acetyl/propionyl-CoA carboxylase alpha subunit I Contig1 OEOE1585 COG4770 594 1.0e-171
Acetyl/propionyl-CoA carboxylase alpha subunit I Contig1 OEOE1587 COG4770 52 2e-08
Acyl-ACP thioesterase I Contig1 OEOE1403 COG3884 127 8e-31
Acyl carrier protein phosphodiesterase I Contig1 OEOE0727 COG1182 52 4e-08
Acyl carrier protein phosphodiesterase I Contig1 OEOE0875 COG1182 38 5e-04
Acyl carrier protein phosphodiesterase I Contig1 OEOE0881 COG1182 141 3e-35
Acyl carrier protein phosphodiesterase I Contig1 OEOE1767 COG1182 48 3e-07
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase I Contig1 OEOE0280 COG0365 229 4e-61
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase I Contig1 OEOE1263 COG0365 166 3e-42
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase I Contig1 OEOE1366 COG0365 237 1e-63
Carboxylesterase type B I Contig1 OEOE1292 COG2272 37 0.002
Carboxylesterase type B I Contig1 OEOE1573 COG2272 57 1e-09
Carboxylesterase type B I Contig1 OEOE1768 COG2272 37 0.001
CDP-diglyceride synthetase I Contig1 OEOE0980 COG0575 127 8e-31
Cytidylyltransferase I Contig1 OEOE1312 COG0615 41 1e-04

DEOXYXYLULOSE PATHWAY OF TERPENOID BIOSYNTHESIS

COG Name Group Contig Gene COG ID Score Evalue
4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase I Contig1 OEOE1101 COG1947 40 2e-04
4-diphosphocytidyl-2-methyl-D-erithritol synthase I Contig1 OEOE1449 COG1211 39 3e-04
4-diphosphocytidyl-2-methyl-D-erithritol synthase I Contig1 OEOE1542 COG1211 47 3e-06
Deoxyxylulose-5-phosphate synthase I Contig1 OEOE0328 COG1154 35 0.007
Deoxyxylulose-5-phosphate synthase I Contig1 OEOE0329 COG1154 92 6e-20
Deoxyxylulose-5-phosphate synthase I Contig1 OEOE1480 COG1154 64 5e-11
COG Name Group Contig Gene COG ID Score Evalue
Esterase/lipase I Contig1 OEOE1049 COG0657 44 2e-05
Esterase/lipase I Contig1 OEOE1292 COG0657 84 8e-18
Esterase/lipase I Contig1 OEOE1306 COG0657 67 5e-12
Esterase/lipase I Contig1 OEOE1573 COG0657 128 6e-31
Esterase/lipase I Contig1 OEOE1768 COG0657 75 4e-15

FATTY ACID BIOSYNTHESIS

COG Name Group Contig Gene COG ID Score Evalue
3-hydroxyacyl-CoA dehydrogenase I Contig1 OEOE0077 COG1250 40 2e-04
3-hydroxyacyl-CoA dehydrogenase I Contig1 OEOE0266 COG1250 39 4e-04
3-hydroxyacyl-CoA dehydrogenase I Contig1 OEOE1325 COG1250 38 0.001
3-hydroxyacyl-CoA dehydrogenase I Contig1 OEOE1602 COG1250 35 0.006
3-oxoacyl-(acyl-carrier-protein) synthase I Contig1 OEOE0529 COG0304 39 7e-04
3-oxoacyl-(acyl-carrier-protein) synthase I Contig1 OEOE1588 COG0304 434 1.0e-123
Acetyl-CoA acetyltransferase I Contig1 OEOE0529 COG0183 328 6e-91
Acetyl-CoA acetyltransferase I Contig1 OEOE1588 COG0183 38 9e-04
Acetyl-CoA carboxylase alpha subunit I Contig1 OEOE1583 COG0825 305 3e-84
Acetyl-CoA carboxylase beta subunit I Contig1 OEOE1584 COG0777 331 4e-92
Acyl carrier protein I Contig1 OEOE0287 COG0236 38 2e-04
Acyl carrier protein I Contig1 OEOE0451 COG0236 51 1e-08
Acyl carrier protein I Contig1 OEOE1592 COG0236 43 4e-06
(acyl-carrier-protein) S-malonyltransferase I Contig1 OEOE1590 COG0331 258 5e-70
Biotin carboxylase I Contig1 OEOE0261 COG0439 97 8e-21
Biotin carboxylase I Contig1 OEOE0672 COG0439 62 6e-11
Biotin carboxylase I Contig1 OEOE1137 COG0439 44 2e-05
Biotin carboxylase I Contig1 OEOE1585 COG0439 577 1.0e-166
Biotin carboxyl carrier protein I Contig1 OEOE0330 COG0511 51 2e-07
Biotin carboxyl carrier protein I Contig1 OEOE1587 COG0511 92 2e-20
Enoyl-CoA hydratase/carnithine racemase I Contig1 OEOE0279 COG1024 174 4e-45
Enoyl-CoA hydratase/carnithine racemase I Contig1 OEOE1583 COG1024 35 0.005
COG Name Group Contig Gene COG ID Score Evalue
Fatty acid/phospholipid biosynthesis enzyme I Contig1 OEOE0450 COG0416 354 7e-99
Fatty acid/phospholipid biosynthesis enzyme I Contig1 OEOE1435 COG0416 44 1e-05
Hydroxymethylglutaryl-CoA reductase I Contig1 OEOE1799 COG1257 231 6e-62
Isopentenyldiphosphate isomerase I Contig1 OEOE0674 COG1443 42 2e-05
Isopentenyldiphosphate isomerase I Contig1 OEOE1697 COG1443 34 0.007
Long-chain acyl-CoA synthetase (AMP-forming) I Contig1 OEOE0280 COG1022 194 1e-50
Long-chain acyl-CoA synthetase (AMP-forming) I Contig1 OEOE1263 COG1022 158 8e-40
Long-chain acyl-CoA synthetase (AMP-forming) I Contig1 OEOE1366 COG1022 143 2e-35
Lysophospholipase I Contig1 OEOE0060 COG2267 35 0.003
Lysophospholipase I Contig1 OEOE0208 COG2267 60 2e-10
Lysophospholipase I Contig1 OEOE0241 COG2267 59 3e-10
Lysophospholipase I Contig1 OEOE0326 COG2267 53 2e-08
Lysophospholipase I Contig1 OEOE0576 COG2267 44 1e-05
Lysophospholipase I Contig1 OEOE0700 COG2267 60 2e-10
Lysophospholipase I Contig1 OEOE1064 COG2267 37 0.002
Lysophospholipase I Contig1 OEOE1306 COG2267 49 1e-06
Lysophospholipase I Contig1 OEOE1527 COG2267 66 3e-12
Lysophospholipase I Contig1 OEOE1768 COG2267 37 0.002
Lysophospholipase I Contig1 OEOE1827 COG2267 42 6e-05

MENAQUINONE BIOSYNTHESIS

COG Name Group Contig Gene COG ID Score Evalue
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II I Contig1 OEOE0280 COG0318 365 1.0e-102
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II I Contig1 OEOE1263 COG0318 290 2e-79
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II I Contig1 OEOE1366 COG0318 322 5e-89
COG Name Group Contig Gene COG ID Score Evalue
Mevalonate kinase I Contig1 OEOE0304 COG1577 86 4e-18
Mevalonate kinase I Contig1 OEOE1100 COG1577 238 4e-64
Mevalonate kinase I Contig1 OEOE1101 COG1577 53 4e-08
Mevalonate kinase I Contig1 OEOE1102 COG1577 127 7e-31
Mevalonate pyrophosphate decarboxylase I Contig1 OEOE1100 COG3407 41 1e-04
Mevalonate pyrophosphate decarboxylase I Contig1 OEOE1101 COG3407 262 3e-71
Phosphatidylglycerophosphatase A and related protein I Contig1 OEOE1369 COG1267 60 1e-10
Phosphatidylglycerophosphatase A and related protein I Contig1 OEOE1855 COG1267 103 1e-23
Phosphatidylglycerophosphate synthase I Contig1 OEOE1383 COG0558 90 7e-20
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase I Contig1 OEOE1387 COG1502 273 2e-74
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase I Contig1 OEOE1629 COG1502 44 5e-05
Phosphomevalonate kinase I Contig1 OEOE1100 COG3890 43 2e-05
Phosphomevalonate kinase I Contig1 OEOE1102 COG3890 56 3e-09
Phosphopantetheinyl transferase (holo-ACP synthase) I Contig1 OEOE1642 COG0736 92 1e-20
Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase) I Contig1 OEOE0424 COG3697 129 1e-31
Phytoene/squalene synthetase I Contig1 OEOE0064 COG1562 110 7e-26
Poly(3-hydroxyalkanoate) synthetase I Contig1 OEOE0241 COG3243 40 3e-04
Sphingosine kinase I Contig1 OEOE1675 COG1597 251 7e-68
Undecaprenyl pyrophosphate synthase I Contig1 OEOE0979 COG0020 304 3e-84

-
SiteMap      Feedback      Life Sciences Division      ORNL     Disclaimer     Webmaster