Cell Motility and Secretion

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Autotransporter protein or domain integral membrane beta-barrel involved in protein secretion	N	Contig6	Nwi1826	COG5571	38	6e-04
Chemotaxis protein	N	Contig6	Nwi2571	COG3143	45	5e-06
Chemotaxis protein histidine kinase and related kinase	N	Contig6	Nwi0114	COG0643	38	0.003
Chemotaxis protein histidine kinase and related kinase	N	Contig6	Nwi0119	COG0643	40	5e-04
Chemotaxis protein histidine kinase and related kinase	N	Contig6	Nwi0347	COG0643	41	3e-04
Chemotaxis protein histidine kinase and related kinase	N	Contig6	Nwi0520	COG0643	440	1.0e-124
Chemotaxis protein histidine kinase and related kinase	N	Contig6	Nwi0521	COG0643	42	2e-05
Chemotaxis protein histidine kinase and related kinase	N	Contig6	Nwi0749	COG0643	36	0.004
Chemotaxis protein histidine kinase and related kinase	N	Contig6	Nwi1029	COG0643	41	1e-04
Chemotaxis protein histidine kinase and related kinase	N	Contig6	Nwi1138	COG0643	50	1e-06
Chemotaxis protein histidine kinase and related kinase	N	Contig6	Nwi1198	COG0643	44	2e-05
Chemotaxis protein histidine kinase and related kinase	N	Contig6	Nwi1200	COG0643	38	0.002
Chemotaxis protein histidine kinase and related kinase	N	Contig6	Nwi1446	COG0643	37	0.006
Chemotaxis protein histidine kinase and related kinase	N	Contig6	Nwi1744	COG0643	56	8e-09
Chemotaxis protein histidine kinase and related kinase	N	Contig6	Nwi1754	COG0643	54	3e-08
Chemotaxis protein histidine kinase and related kinase	N	Contig6	Nwi2221	COG0643	57	3e-09
Chemotaxis protein histidine kinase and related kinase	N	Contig6	Nwi2914	COG0643	42	1e-04
Chemotaxis protein histidine kinase and related kinase	N	Contig6	Nwi3058	COG0643	44	3e-05
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig6	Nwi0087	COG2201	52	3e-08
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig6	Nwi0114	COG2201	49	2e-06
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig6	Nwi0119	COG2201	36	0.008
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig6	Nwi0241	COG2201	50	1e-07
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig6	Nwi0348	COG2201	75	3e-15
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig6	Nwi0511	COG2201	53	2e-08
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig6	Nwi0520	COG2201	52	1e-07
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig6	Nwi0522	COG2201	74	4e-15
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig6	Nwi0523	COG2201	261	8e-71
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig6	Nwi0525	COG2201	56	2e-09
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig6	Nwi0574	COG2201	48	2e-07
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig6	Nwi0992	COG2201	52	7e-08
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig6	Nwi1028	COG2201	48	4e-07
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig6	Nwi1138	COG2201	45	3e-05
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig6	Nwi1187	COG2201	51	5e-08
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig6	Nwi1196	COG2201	41	5e-05
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig6	Nwi1334	COG2201	59	2e-10
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig6	Nwi1431	COG2201	60	6e-11
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig6	Nwi1432	COG2201	67	3e-12
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig6	Nwi1445	COG2201	50	3e-07
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig6	Nwi1447	COG2201	63	6e-11
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig6	Nwi1755	COG2201	39	2e-04
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig6	Nwi1756	COG2201	52	6e-08
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig6	Nwi2518	COG2201	63	2e-11
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig6	Nwi2540	COG2201	47	5e-07
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig6	Nwi2771	COG2201	41	8e-05
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig6	Nwi2913	COG2201	43	2e-05
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig6	Nwi2946	COG2201	38	2e-04
Chemotaxis signal transduction protein	N	Contig6	Nwi0520	COG0835	40	7e-04
Chemotaxis signal transduction protein	N	Contig6	Nwi0521	COG0835	99	1e-22
Flagellar basal body rod protein	N	Contig6	Nwi1099	COG4787	43	8e-05
Flagellar basal body rod protein	N	Contig6	Nwi1099	COG4786	84	3e-17
Flagellar basal body rod protein	N	Contig6	Nwi1121	COG4787	115	3e-27
Flagellar basal body rod protein	N	Contig6	Nwi1121	COG4786	262	2e-71
Flagellar basal body rod protein	N	Contig6	Nwi1122	COG4787	130	1e-31
Flagellar basal body rod protein	N	Contig6	Nwi1122	COG4786	179	2e-46
Flagellar basal body rod protein	N	Contig6	Nwi1133	COG4786	41	3e-05
Flagellar biogenesis protein	N	Contig6	Nwi1131	COG3190	35	0.007
Flagellar biosynthesis regulator FlaF	N	Contig6	Nwi1106	COG5442	41	2e-05
Flagellar biosynthesis regulator FlbT	N	Contig6	Nwi1103	COG5443	66	9e-13
Flagellar hook-length control protein	N	Contig6	Nwi0602	COG3144	48	2e-06

FLAGELLUM STRUCTURE AND BIOGENESIS

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Flagellar basal body-associated protein	N	Contig6	Nwi1123	COG1580	66	2e-12
Flagellar basal body L-ring protein	N	Contig6	Nwi1119	COG2063	185	2e-48
Flagellar basal body P-ring biosynthesis protein	N	Contig6	Nwi0647	COG1261	36	0.005
Flagellar basal body P-ring biosynthesis protein	N	Contig6	Nwi1120	COG1261	76	4e-15
Flagellar basal-body P-ring protein	N	Contig6	Nwi1111	COG1706	396	1.0e-111
Flagellar basal body protein	N	Contig6	Nwi1132	COG1815	67	4e-13
Flagellar basal body protein	N	Contig6	Nwi1133	COG1815	49	1e-07
Flagellar basal body rod protein	N	Contig6	Nwi1099	COG1558	40	4e-04
Flagellar basal body rod protein	N	Contig6	Nwi1121	COG1558	45	7e-06
Flagellar basal body rod protein	N	Contig6	Nwi1122	COG1558	38	6e-04
Flagellar basal body rod protein	N	Contig6	Nwi1133	COG1558	140	3e-35
Flagellar biosynthesis pathway component FlhA	N	Contig6	Nwi0529	COG1298	775	0.0
Flagellar biosynthesis pathway component FlhB	N	Contig6	Nwi1137	COG1377	345	3e-96
Flagellar biosynthesis pathway component FlhB	N	Contig6	Nwi1400	COG1377	84	2e-18
Flagellar biosynthesis pathway component FliP	N	Contig6	Nwi1130	COG1338	270	7e-74
Flagellar biosynthesis pathway component FliQ	N	Contig6	Nwi1135	COG1987	69	8e-14
Flagellar biosynthesis pathway component FliR	N	Contig6	Nwi1136	COG1684	135	3e-33
Flagellar biosynthesis/type III secretory pathway ATPase	N	Contig6	Nwi0100	COG1157	113	3e-26
Flagellar biosynthesis/type III secretory pathway ATPase	N	Contig6	Nwi0430	COG1157	206	4e-54
Flagellar biosynthesis/type III secretory pathway ATPase	N	Contig6	Nwi0433	COG1157	249	3e-67
Flagellar biosynthesis/type III secretory pathway ATPase	N	Contig6	Nwi0526	COG1157	545	1.0e-156
Flagellar biosynthesis/type III secretory pathway lipoprotein	N	Contig6	Nwi0599	COG1766	370	1.0e-103
Flagellar biosynthesis/type III secretory pathway protein	N	Contig6	Nwi0597	COG1317	53	2e-08
Flagellar GTP-binding protein	N	Contig6	Nwi0316	COG1419	107	1e-24
Flagellar GTP-binding protein	N	Contig6	Nwi2779	COG1419	94	2e-20
Flagellar hook-associated protein	N	Contig6	Nwi1099	COG1256	40	7e-04
Flagellar hook-associated protein	N	Contig6	Nwi1100	COG1256	192	5e-50
Flagellar hook-associated protein	N	Contig6	Nwi1121	COG1256	39	3e-04
Flagellar hook-basal body protein	N	Contig6	Nwi1134	COG1677	55	1e-09
Flagellar hook capping protein	N	Contig6	Nwi0601	COG1843	87	1e-18
Flagellar hook protein FlgE	N	Contig6	Nwi1099	COG1749	117	2e-27
Flagellar hook protein FlgE	N	Contig6	Nwi1100	COG1749	37	0.005
Flagellar hook protein FlgE	N	Contig6	Nwi1121	COG1749	97	1e-21
Flagellar hook protein FlgE	N	Contig6	Nwi1122	COG1749	69	3e-13
Flagellar hook protein FlgE	N	Contig6	Nwi1133	COG1749	43	1e-05
Flagellar motor component	N	Contig6	Nwi0703	COG1291	39	7e-04
Flagellar motor component	N	Contig6	Nwi1236	COG1291	169	2e-43
Flagellar motor component	N	Contig6	Nwi2040	COG1291	40	3e-04
Flagellar motor component	N	Contig6	Nwi2720	COG1291	38	8e-04
Flagellar motor protein	N	Contig6	Nwi0502	COG1360	79	8e-16
Flagellar motor protein	N	Contig6	Nwi1237	COG1360	136	2e-33
Flagellar motor protein	N	Contig6	Nwi1814	COG1360	71	9e-14
Flagellar motor protein	N	Contig6	Nwi2714	COG1360	61	4e-11
Flagellar motor protein	N	Contig6	Nwi2744	COG1360	138	8e-34
Flagellar motor protein	N	Contig6	Nwi2802	COG1360	62	1e-10
Flagellar motor protein	N	Contig6	Nwi3028	COG1360	65	3e-12
Flagellar motor switch protein	N	Contig6	Nwi0596	COG1868	46	7e-07
Flagellar motor switch protein	N	Contig6	Nwi0598	COG1536	259	3e-70
Flagellar motor switch protein	N	Contig6	Nwi1124	COG1868	201	6e-53
Flagellar motor switch protein	N	Contig6	Nwi1730	COG1868	43	7e-06
Flagellar motor switch/type III secretory pathway protein	N	Contig6	Nwi0596	COG1886	86	6e-19
Flagellar motor switch/type III secretory pathway protein	N	Contig6	Nwi1124	COG1886	38	0.002
Flagellar motor switch/type III secretory pathway protein	N	Contig6	Nwi1730	COG1886	54	2e-09
Flagellin and related hook-associated protein	N	Contig6	Nwi1101	COG1344	41	2e-04
Flagellin and related hook-associated protein	N	Contig6	Nwi1104	COG1344	47	3e-06
Flagellin and related hook-associated protein	N	Contig6	Nwi1105	COG1344	55	2e-08
Predicted ATPase involved in biogenesis of flagella	N	Contig6	Nwi1280	COG2874	37	0.002
Predicted ATPase involved in biogenesis of flagella	N	Contig6	Nwi2015	COG2874	43	6e-05

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Flp pilus assembly protein TadC	N	Contig6	Nwi0296	COG2064	119	3e-28
Flp pilus assembly protein TadC	N	Contig6	Nwi0297	COG2064	51	2e-07
Methyl-accepting chemotaxis protein	N	Contig6	Nwi0530	COG0840	133	3e-32
Methyl-accepting chemotaxis protein	N	Contig6	Nwi1198	COG0840	49	8e-07
Methyl-accepting chemotaxis protein	N	Contig6	Nwi2996	COG0840	118	1e-27
Methyl-accepting chemotaxis protein	N	Contig6	Nwi3040	COG0840	50	5e-07
Methylase of chemotaxis methyl-accepting protein	N	Contig6	Nwi0524	COG1352	264	7e-72
Predicted small periplasmic lipoprotein	N	Contig6	Nwi0714	COG5567	34	0.002
Rod binding protein	N	Contig6	Nwi1110	COG3951	40	4e-05
Tfp pilus assembly protein ATPase PilM	N	Contig6	Nwi1057	COG4972	35	0.008
Tfp pilus assembly protein ATPase PilU	N	Contig6	Nwi0298	COG5008	62	7e-11
Tfp pilus assembly protein FimV	N	Contig6	Nwi1772	COG3170	37	0.004
Tfp pilus assembly protein FimV	N	Contig6	Nwi2718	COG3170	35	0.007
Tfp pilus assembly protein FimV	N	Contig6	Nwi3029	COG3170	37	0.002
Tfp pilus assembly protein PilF	N	Contig6	Nwi0295	COG3063	40	2e-04
Tfp pilus assembly protein PilF	N	Contig6	Nwi0964	COG3063	52	2e-07
Tfp pilus assembly protein PilF	N	Contig6	Nwi0984	COG3063	38	4e-04
Tfp pilus assembly protein PilF	N	Contig6	Nwi1393	COG3063	45	5e-06
Tfp pilus assembly protein PilF	N	Contig6	Nwi1742	COG3063	38	0.002
Tfp pilus assembly protein PilF	N	Contig6	Nwi2594	COG3063	43	4e-05
Tfp pilus assembly protein pilus retraction ATPase PilT	N	Contig6	Nwi0298	COG2805	70	3e-13
Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB	N	Contig6	Nwi0298	COG2804	80	4e-16
Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB	N	Contig6	Nwi2485	COG2804	36	0.009
Type II secretory pathway component PulD	N	Contig6	Nwi0301	COG1450	122	9e-29
Type II secretory pathway component PulF	N	Contig6	Nwi0297	COG1459	35	0.008
Type IV pili component	N	Contig6	Nwi0300	COG5461	147	1e-36
Type IV secretory pathway VirB11 protein involved in flagella biosynthesis	N	Contig6	Nwi0298	COG0630	216	4e-57

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