ID Contig6 standard; DNA; UNC; 3402093 BP. FT CDS 567..1994 FT /locus_tag="Nwi_0001" FT /product="chromosomal replication initiator protein, DnaA" FT /note="TIGRFAM: Bacterial chromosomal replication FT initiator protein, DnaA" FT /note="PFAM: Bacterial chromosomal replication initiator FT protein, DnaA" FT /note="SMART: ATPase " FT /note="SPTR top hit: Q89W63 Chromosomal replication FT initiator protein dnaA. Bradyrhizobium japonicum" FT /note="KEGG top hit: bja:bll0830 dnaA category=Unassigned" FT /note="COGs: category=L group=COG0593 ATPase involved in DNA replication initiation" FT /note="InterPro IPR001957:IPR003593" FT /codon_start=1 FT /transl_table=11 FT /colour=2 FT /translation="MSDTEQERWSRVKGRLRSTVGEDIYSSWFARMDLESVHGESVRLSVPTRFLKSWIQAHYAERVLSCWQAELPDVHRIDLT FT VRSAMRCAAPVREAPATDARHPERSEGRNGVELKTVATAPASANHDALGGSPLDPRLTFQSFVTGRSNTLAHAAARQVAE FT GRRGDSVMFNPLYIHAGVGLGKTHLLQAVTWAGNAGTERRVLYLTAEKFMYGFVAALKTQTALAFKEALRGIDVLVIDDL FT QFLQGKSTQAEFCHTLNALIDAGRQVVIAADRPPSDLESLDDRVRSRLAGGLVVEMGSLGEELRLGILRSRVEAARVHHA FT SFDVPEPVLDYLAKAITHNGRDLEGAINRLLAHSKLNAQPVTLEMAEREVRDLVRPQEPRRIKIEDIQRVVARQYNVSRS FT DLLSSRRTANVVRPRQVAMYLAKTLTLRSLPEIGRRFGGRDHTTVLHAVRKIEALVSKDTTLSDEVELLKRQLQE*" FT gene 567..1994 FT /locus_tag="Nwi_0001" FT /colour=2 FT CDS 2211..3329 FT /locus_tag="Nwi_0002" FT /EC_number="2.7.7.7" FT /product="DNA polymerase III, beta chain" FT /note="TIGRFAM: DNA polymerase III, beta chain: (7.2e-92)" FT /note="PFAM: DNA polymerase III, beta chain: (1.4e-45) DNA FT polymerase III, beta chain: (2.2e-46) DNA polymerase III, FT beta chain: (2.9e-36)" FT /note="SMART: DNA polymerase III, beta chain: (6.2e-128)" FT /note="SPTR top hit: 'Q89W64 DNA polymerase III beta FT chain. Bradyrhizobium japonicum., evalue=0.0, 90% identity FT hit'" FT /note="KEGG top hit: 'bja:bll0829 dnaN EC=2.7.7.7 FT category=Metabolism; Nucleotide Metabolism; Purine FT metabolism [PATH:bja00230] Metabolism; Nucleotide FT Metabolism; Pyrimidine metabolism [PATH:bja00240] Genetic FT Information Processing; Replication and Repair; DNA FT polymerase [PATH:bja03030] , evalue=0.0, 90.322581% FT identity hit'" FT /note="COGs: 'evalue=9e-93 score=334 category=L FT group=COG0592 DNA polymerase sliding clamp subunit (PCNA FT homolog)'" FT /note="InterPro IPR001001" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=2 FT /translation="MKVTVERAQLLKSLGHVHRVVERRNTIPILGNVLVRAENAKLSLKATDLDLEVTETLAAETGTVGSTTVPAHMFYDIIRK FT LPDGAQIVLEGDGDRSVLTIRAGRSRFTLQTLPENDFPDLAAGEMTHSFTLAAADLKRLIDRTQFAISTEETRYYLNGIY FT LHGAGTANNATLRGVATDGHRLAQLDLALPKGAEGMPGVIIPRKTVGEVQRLIEDSEAEIGIELSQGKIRFTLGNVVLTS FT KLIDGTFPDYGRVIPQNNDKELVVDKKDFEAAVDRVSTISSERGRAVKLALSAGKLVLSVTNPDSGSATEELEVEYASDA FT LDIGFNSRYLLDIAAQIEGEAAVLKLADPGSPTLVHDRDSRGALYVLMPMRV*" FT gene 2211..3329 FT /locus_tag="Nwi_0002" FT /colour=2 FT CDS 3391..4548 FT /locus_tag="Nwi_0003" FT /product="RecF protein" FT /note="TIGRFAM: RecF protein: (3.9e-15)" FT /note="SPTR top hit: 'Q89W66 DNA replication and repair FT protein recF. Bradyrhizobium japonicum., evalue=1e-162, FT 76% identity hit'" FT /note="KEGG top hit: 'bja:bll0827 recF FT category=Unassigned, evalue=1e-163, 76.595745% identity FT hit'" FT /note="COGs: 'evalue=1e-81 score=296 category=L FT group=COG1195 Recombinational DNA repair ATPase (RecF FT pathway)'" FT /note="InterPro IPR001238:IPR001687" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=2 FT /translation="LPGVMIPSRVRRLSLTHFRNYRAATFETRSNMIVLVGPNGAGKTNCLEAISLLSPGRGLRRATRDDIADNTGDGSWAVSA FT EMQGALGLATLGTGIDAPGNEAAPSGRRCRIDREPVASAAAFGDHLRMVWLTPSMDGLFTGPASDRRRFLDRLVLAIDSE FT HSGRVSALERSLRSRNRLLEMRHHDDLWCEAIERKTAELAVAVAAMRAQTVTRLTAALEARGGGSSFPAASIHLDGWMEN FT ALLTEPATVVEDRYREILRASRPRDAAAGRTLEGPHLTDLEVIYAPKNMPAKEASTGEQKALLIGLVLAHARLVAEMTGI FT IPLLLLDEVVAHLDPDRRGALFGELAGLGAQVWMSGADPAAFANLSAGSETFRVDSGRITREPPT* FT " FT gene 3391..4548 FT /locus_tag="Nwi_0003" FT /colour=2 FT CDS 4812..7253 FT /locus_tag="Nwi_0004" FT /EC_number="5.99.1.3" FT /product="DNA gyrase, B subunit" FT /note="TIGRFAM: DNA gyrase, B subunit: (0)" FT /note="PFAM: DNA topoisomerase II: (4.1e-82) DNA gyrase, FT subunit B, C-terminal: (8.3e-36) ATP-binding region, FT ATPase-like: (2.5e-31) TOPRIM: (3.3e-08)" FT /note="SMART: DNA topoisomerase II: (1.8e-252) ATP-binding FT region, ATPase-like: (1.1e-27)" FT /note="SPTR top hit: 'Q6NDV0 DNA gyrase subunit B. FT Rhodopseudomonas palustris., evalue=0.0, 87% identity FT hit'" FT /note="KEGG top hit: 'rpa:RPA0004 gyrB EC=5.99.1.3 FT category=Unassigned, evalue=0.0, 87.330873% identity hit'" FT /note="COGs: 'evalue=0.0 score=879 category=L FT group=COG0187 Type IIA topoisomerase (DNA gyrase/topo II FT topoisomerase IV) B subunit'" FT /note="InterPro FT IPR000565:IPR001241:IPR002288:IPR003594:IPR006171:IPR011557:IPR011558" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=2 FT /translation="MNEPARQQIADTESVAAIEYGAESIRVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDEALAGHATAVEVILNA FT DNSVTVRDDGRGIPVDIHKGEGVSAAEVIMTQLHAGGKFDQNSYKVSGGLHGVGVSVVNALSSKLTLRIWRRDKEHLIEF FT ANGDALAPLKVVGDANGRRGTEVTFLASTETFTNIEYDFATLEHRLRELAFLNSGVNILLSDMRHAVERREQMMYEGGVV FT EFVKYLDRNKKAMVADPIMVRAEMNGISVEAALWWNDSYHENVLCFTNNIPQRDGGTHLAGFRGALTRQVNGYADAMAKK FT ERIALTGDDCREGLTAVLSVKVPDPKFSSQTKDKLVSSEVRPVVENVINEALAAWFEEHPTEAKLIVGKVVEAAAAREAA FT RKARELTRRKGALDVASLPGKLADCQERDPAKSELFIVEGDSAGGSAKQGRNREFQAVLPLRGKILNVERARFDKMLSSE FT QIGTLITALGTGIGREDFDLSKLRYHKIIVMTDADVDGAHIRTLLLTFFFRQMPALIEAGHLYIAQPPLYKVTRGKSERY FT LKDERALEDYLIETGLDDCVYKLATGEDRGGRDLLALVDDARVIRNVLQNLHGRYNRGVIEQAAIAGVMNPRITENLATA FT TAAADYIARRLDALADEVERGWVGRFVEGQGFFFERTVRGVKDVAMIDDALLGSADARKLDEYAGRLQEAYPRPGLLRRR FT DTETAIHGPVSLFEAVTDAGRKGVALQRYKGLGEMNPDQLWETTLDVSERSLLQVKIKEVDEADDIFTKLMGDVVEPRRE FT FIQDNSLSANVDV*" FT gene 4812..7253 FT /locus_tag="Nwi_0004" FT /colour=2 FT CDS complement(7303..7923) FT /locus_tag="Nwi_0005" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q89V82 Blr1165 protein. FT Bradyrhizobium japonicum., evalue=3e-62, 61% identity FT hit'" FT /note="KEGG top hit: 'bja:blr1165 category=Unassigned, FT evalue=1e-62, 61.170213% identity hit'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MTPIRARPRWGCAALRQVMKVHALKVGLVLLAALLWSSVPAVRPASAQVNFDRPGADYLRVPLRSGDPVDCGLACERDRR FT CRAWSFSYPNERSETAVCWLKNAVPQRIANRCCVSGVRGAGVIERRIGPVETSTDRSGGDYRNFEIRKDERADADQVCRH FT ACDADSKCRAWTYARPGYAGKAARCFLKKEIKPPHRRPGFTSGVIR*" FT gene complement(7303..7923) FT /locus_tag="Nwi_0005" FT /colour=13 FT sig_peptide complement(7780..7923) FT /colour=11 FT /locus_tag="Nwi_0005" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.864) with cleavage site probability FT 0.859 atresidue 48" FT misc_feature complement(7795..7860) FT /colour=11 FT /locus_tag="Nwi_0005" FT /note="1 probable transmembrane helix predicted FT byTMHMM2.0" FT CDS complement(8214..8582) FT /locus_tag="Nwi_0006" FT /product="transposase, IS4" FT /note="PFAM: Transposase, IS4: (0.0001)" FT /note="SPTR top hit: 'Q81ZP9 Transposase IS4 family. FT Nitrosomonas europaea., evalue=2e-28, 53% identity hit'" FT /note="KEGG top hit: 'neu:NE2446 category=Unassigned, FT evalue=7e-29, 53.719008% identity hit'" FT /note="COGs: 'evalue=5e-13 score=66.7 category=L FT group=COG3293 Transposase and inactivated derivatives'" FT /note="InterPro IPR002559" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=2 FT /translation="MLADALGRPLRFIVTAGQVGDVTQAPALLEAQAGDAVLADKAYDSNALRALIAGMGAEAVIPSNRTRKIIIPHDAGLYKH FT RNRIERCFNRLKHFRRFATRYDRRTVHFTGFVHLAAALIWLP*" FT gene complement(8214..8582) FT /locus_tag="Nwi_0006" FT /colour=2 FT CDS complement(8597..8995) FT /locus_tag="Nwi_0007" FT /product="transposase" FT /note="SPTR top hit: 'Q81ZK8 Transposase. Nitrosomonas FT europaea., evalue=1e-48, 68% identity hit'" FT /note="KEGG top hit: 'neu:NE2412 category=Unassigned, FT evalue=5e-49, 68.595041% identity hit'" FT /note="COGs: 'evalue=2e-13 score=68.2 category=L FT group=COG3293 Transposase and inactivated derivatives'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=2 FT /translation="VILTRSCTMGIKRYELSDHQWAKIAPLLPGKASDPGRTGSDNRLFVNGCLWVLRSGAHWCDLPERYGRWKTVHRRFSRWC FT HAGVWERVFSTLTADRDNQYLMLDSTIVRAHQQAATGKGGPRIRRWGVPEVD*" FT gene complement(8597..8995) FT /locus_tag="Nwi_0007" FT /colour=2 FT CDS 9288..9782 FT /locus_tag="Nwi_0008" FT /product="UspA" FT /note="PFAM: UspA: (7.6e-07)" FT /note="SPTR top hit: 'Q6NCL8 Hypothetical protein. FT Rhodopseudomonas palustris., evalue=2e-62, 69% identity FT hit'" FT /note="KEGG top hit: 'rpa:RPA0454 category=Unassigned, FT evalue=1e-62, 69.512195% identity hit'" FT /note="COGs: 'evalue=2e-05 score=41.9 category=T FT group=COG0589 Universal stress protein UspA and related FT nucleotide-binding proteins'" FT /note="InterPro IPR006016" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MSAQRRSYESGHKPKYLVVVDDSAEWDRAVYYASRRAIRVGGGIVMLRVVEPEDRNQEWLGIAEVIRAEAYEGADAALDR FT ASGRANGIAAITPERIIREGDPLEQILDVIEKDLDISMLVLAASGGPEGPGPIITTLAKTAGNFPIPVTIVPGTLTDDAI FT DALS*" FT gene 9288..9782 FT /locus_tag="Nwi_0008" FT /colour=13 FT CDS 10086..10658 FT /locus_tag="Nwi_0009" FT /product="nitrogen-fixing NifU" FT /note="PFAM: Nitrogen-fixing NifU, C-terminal: (4.3e-29)" FT /note="SPTR top hit: 'Q89W93 Bll0800 protein. FT Bradyrhizobium japonicum., evalue=8e-79, 76% identity FT hit'" FT /note="KEGG top hit: 'bja:bll0800 category=Unassigned, FT evalue=4e-79, 76.842105% identity hit'" FT /note="COGs: 'evalue=2e-24 score=105 category=O FT group=COG0694 Thioredoxin-like proteins and domains'" FT /note="InterPro IPR001075" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MFIQTEITPNPATLKFLPGRTVLGKGTMEFTSASTTARSPLAVKLFAVHGVAGVFYGSDFITVTKDEGSDWQHLKPAILG FT VIMEHYMAGAPLLADGEGCSEANADSDVEFFDEADAETVTLIKDLIETRVRPGVADDGGDITFRGFRDGIVYVNMKGACS FT GCPSSTVTLRNGIQNLLKHFVPEVVEVRPV*" FT gene 10086..10658 FT /locus_tag="Nwi_0009" FT /colour=9 FT CDS complement(10655..11857) FT /locus_tag="Nwi_0010" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q6N7U7 Hypothetical protein FT precursor. Rhodopseudomonas palustris., evalue=5e-58, 41% FT identity hit'" FT /note="KEGG top hit: 'rpa:RPA2157 category=Unassigned, FT evalue=3e-58, 41.131105% identity hit'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="VTLDVGRMTYVTGRRYYEAAAHSADLPRKAVPQNILGFAGLACIGLACAWTLYTRVSGGFEPAELVTASLPPVVSGRSAE FT PVHRIAAAYEALEEIPGVRAPQAIAGVRAARFPVSKAPVSKNRAANAGVTKAGVTKARAEDPQARARTALLYGPRLLGPP FT PGTFEPAAASQIAVSSLAEAPPEILPLPQASQISSIVPMPAPRPSELRQLQAASAPSRSEIAQASAAVAPEPNKPSIFEK FT LFGRPAAGLKLAFAAPDGGVSSDGESLTLGSIPQHESTAIYDISARTVYLPDGTRLEAHSGLGKMMDDPRYADRKMRGVT FT PPHIYDLSLRERPFHGVEAIRLKPIGGEDKIYGRTGLLAHTYMLGPSGASNGCVSFKNYDAFLRAYKSGKIKRLVVVAKL FT *" FT gene complement(10655..11857) FT /locus_tag="Nwi_0010" FT /colour=13 FT misc_feature complement(11696..11752) FT /colour=11 FT /locus_tag="Nwi_0010" FT /note="1 probable transmembrane helix predicted FT byTMHMM2.0" FT CDS 12141..12839 FT /locus_tag="Nwi_0011" FT /EC_number="3.4.24.57" FT /product="peptidase M22, glycoprotease" FT /note="PFAM: Peptidase M22, glycoprotease: (7.3e-20)" FT /note="SPTR top hit: 'Q89W94 Bll0799 protein. FT Bradyrhizobium japonicum., evalue=3e-86, 70% identity FT hit'" FT /note="KEGG top hit: 'bja:bll0799 category=Unassigned, FT evalue=2e-86, 70.642202% identity hit'" FT /note="COGs: 'evalue=2e-33 score=136 category=O FT group=COG1214 Inactive homolog of metal-dependent FT proteases putative molecular chaperone'" FT /note="InterPro IPR000905" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MLVLAIDTALDACAAGILDTDEGRLIAQETLPMKRGHAETLMPLIARVIESAGIGFKALDRIAATTGPGSFTGLRVGLSA FT ARGIALAADKPVVGVTTLAAFAAPVIGEDRKPPVISAIDARHDQVYFQAMSGDGAALIQPRVAPVAEALAASRFGAPHLV FT GNAARLLADRWPAHAPPPVAVDQQAAPDIVWVAWLGAAVSPDAAPPRPYYLRAPDARPTGDTLLKPRTLAAS* FT " FT gene 12141..12839 FT /locus_tag="Nwi_0011" FT /colour=9 FT CDS 12836..13318 FT /locus_tag="Nwi_0012" FT /EC_number="2.3.1.128" FT /product="Ribosomal-protein-alanine acetyltransferase" FT /note="TIGRFAM: Ribosomal-protein-alanine FT acetyltransferase: (1.3e-24)" FT /note="PFAM: GCN5-related N-acetyltransferase: (1.4e-15)" FT /note="SPTR top hit: 'Q89W95 Bll0798 protein. FT Bradyrhizobium japonicum., evalue=4e-56, 68% identity FT hit'" FT /note="KEGG top hit: 'bja:bll0798 EC=2.3.1.128 FT category=Unassigned, evalue=3e-56, 68.944099% identity FT hit'" FT /note="COGs: 'evalue=5e-14 score=70.4 category=R FT group=COG0456 Acetyltransferases'" FT /note="InterPro IPR000182:IPR006464" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MMTWFPGRERAVPIVEPASPNDAARLAAIHGASFHRGWGESEFETMIAERNTLVQRLRLRSNVIGFAVSRIAADEAEILS FT IAIDAGYRGQGFSRNLLLTHLGHLAGRGVRTVFLEVEENNQPARRLYERAGFAVVGRRERYYREAGDLELNALVMRRNLS FT *" FT gene 12836..13318 FT /locus_tag="Nwi_0012" FT /colour=11 FT CDS 13439..13909 FT /locus_tag="Nwi_0013" FT /product="ferric-uptake regulator" FT /note="PFAM: Ferric-uptake regulator: (9.2e-56)" FT /note="SPTR top hit: 'O85206 Ferric uptake regulator. FT Bradyrhizobium japonicum., evalue=3e-69, 87% identity FT hit'" FT /note="KEGG top hit: 'bja:bll0797 fur FT category=Unassigned, evalue=2e-69, 87.074830% identity FT hit'" FT /note="COGs: 'evalue=7e-32 score=129 category=P FT group=COG0735 Fe2+/Zn2+ uptake regulation proteins'" FT /note="InterPro IPR002481" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MRHRNRTLEMMALKSTPVQKPTTIEARCAAAGMRMTEQRRVIARVLAEASDHPDVEELYRRCAGVDDKISISTVYRTVKL FT FEDAGIIERHDFREGRARYETMRDSHHDHLINLRDGQVIEFTSDEIEKLQAEVARKLGYRLVDHRLELYCVPMDDE* FT " FT gene 13439..13909 FT /locus_tag="Nwi_0013" FT /colour=9 FT CDS 13929..15362 FT /locus_tag="Nwi_0014" FT /product="tRNA-i(6)A37 FT modification enzyme MiaB" FT /note="TIGRFAM: Protein of unknown function UPF0004: FT (5.6e-185) tRNA-i(6)A37 modification enzyme MiaB: FT (1.6e-151)" FT /note="PFAM: Deoxyribonuclease/rho motif-related TRAM: FT (0.0018) Protein of unknown function UPF0004: (8.5e-46) FT Radical SAM: (1.1e-32)" FT /note="SMART: Elongator protein 3/MiaB/NifB: (1.2e-58)" FT /note="SPTR top hit: 'Q89W97 Bll0795 protein. FT Bradyrhizobium japonicum., evalue=0.0, 80% identity hit'" FT /note="KEGG top hit: 'bja:bll0795 category=Unassigned, FT evalue=0.0, 80.777538% identity hit'" FT /note="COGs: 'evalue=1.0e-141 score=496 category=J FT group=COG0621 2-methylthioadenine synthetase'" FT /note="InterPro FT IPR002792:IPR005839:IPR006463:IPR006638:IPR007197" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=7 FT /translation="MPESRMPPRKLHIKSYGCQMNVYDAQRMADTLAVEGYVETTSAEDADLVILNTCHIREKASEKVYSELGRLRAAKDQAAR FT DGRGMNIVVAGCVAQAEGEEIIRRAPMVDVVVGPQSYHHLPQLLARAKTCGRALETEFPVADKFGFLPQPSRQAIRSRGI FT SAFVTVQEGCDKFCTFCVVPYTRGAEASRPVAKVVEDVRRLADNGVREITLIGQNVNAYHGEGPDGRPWPFGKLLYRLAG FT IPGIVRLRYSTSHPRDVEDTLIDAHRDLDALMPFVHLPVQSGSDRILAAMNRRHTADDYRRVIDRFRQARPDIAFSSDFI FT VGFPGETEEDFAATLALVGQIGYAAAYSFKYSPRPGTPAADMQETVSTADMDQRLVQLQNLIDSQQSAFNRTALGRTIDV FT LFDRAGRKPGQIVGRTAYLQPAHVEASDAIIGQVLPVTVASLERYSLFGTLASKPTSGEPSNHAATGGAQFQTTAGA* FT " FT gene 13929..15362 FT /locus_tag="Nwi_0014" FT /colour=7 FT CDS 15367..16416 FT /locus_tag="Nwi_0015" FT /product="PhoH-like protein" FT /note="PFAM: PhoH-like protein: (3.1e-125) KH, type 1: FT (0.00023)" FT /note="SPTR top hit: 'Q89W98 Phosphate starvation FT inducible protein. Bradyrhizobium japonicum., FT evalue=1e-160, 86% identity hit'" FT /note="KEGG top hit: 'bja:bll0794 phoH FT category=Unassigned, evalue=1e-161, 86.969697% identity FT hit'" FT /note="COGs: 'evalue=1e-96 score=346 category=T FT group=COG1702 Phosphate starvation-inducible protein PhoH FT predicted ATPase'" FT /note="InterPro IPR003714:IPR004088" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=15 FT /translation="LPKSASDSPPLAPSRKPEIQGPPETQVVIDFEDNRAVSALVGPYGQNLSQLERRLGVVVDSRGNHITIAGSRDGCDAGKR FT VLETLYAQAAQGHDLSQGEVEGAIRAAIAQGSLFEDDVKAPRSGFEAINLRKRPVRARTAAQDLYIRALKRHELVFGIGP FT AGTGKTWLAVAQATQLFERKEVDRIILTRPAVEAGERLGFLPGDLREKVDPYLRPIYDALYDLMDSRIVERALQSGEIEI FT APLAFMRGRTLTNAAIILDEAQNTTSMQMKMFLTRLGENSRMIVTGDPSQVDLPNGQTSGLTEATRLLDGVEGVAQVTFI FT AEDVIRHELVARIVAAYEGLPPRPAAGKP*" FT gene 15367..16416 FT /locus_tag="Nwi_0015" FT /colour=15 FT CDS 16416..16988 FT /locus_tag="Nwi_0016" FT /product="Protein of unknown function" FT /note="TIGRFAM: Protein of unknown function UPF0054: FT (8e-49)" FT /note="PFAM: Protein of unknown function UPF0054: FT (3.5e-38)" FT /note="SPTR top hit: 'Q89W99 Hypothetical UPF0054 protein FT bll0793. Bradyrhizobium japonicum., evalue=1e-65, 75% FT identity hit'" FT /note="KEGG top hit: 'bja:bll0793 category=Unassigned, FT evalue=7e-66, 75.796178% identity hit'" FT /note="COGs: 'evalue=3e-39 score=154 category=R FT group=COG0319 metal-dependent hydrolase'" FT /note="InterPro IPR002036" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MPNITCREQPARARRGGEKHIMIRSATPVTEILVVADCWRAEAGAEAVIHRAIATAAGMVDKDTGDAELAIMLTDDAGIR FT TLNANWRGLDKPTNVLSFPALQPTGPCLPDDPPRMLGDIAIAYETLRREAGDERKTFDHHLSHLAVHGFLHLIGYDHETD FT GEAEEMESLERQILAQLGIPDPYAPPERMT*" FT gene 16416..16988 FT /locus_tag="Nwi_0016" FT /colour=11 FT CDS 16989..18116 FT /locus_tag="Nwi_0017" FT /product="CTransporter-associated region" FT /note="PFAM: CBS: (9.4e-26) Transporter-associated region: FT (6.7e-19)" FT /note="SMART: CBS: (0.0028)" FT /note="SPTR top hit: 'Q89WA0 Magnesium and cobalt efflux FT protein. Bradyrhizobium japonicum., evalue=1e-146, 72% FT identity hit'" FT /note="KEGG top hit: 'bja:bll0792 category=Unassigned, FT evalue=1e-146, 72.340426% identity hit'" FT /note="COGs: 'evalue=2e-56 score=213 category=R FT group=COG1253 Hemolysins and related proteins containing FT CBS domains'" FT /note="InterPro IPR000644:IPR005170" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="VPSEDQTSESPPAQESRNLPVPVHNGEVLRPAPERWLMRAIRSLFGWKAGSVRADLQVVLDASTPDETSFTAVERTMLRN FT ILNLHERRIADVMVHRADIVAVKRDIPLGELINLFESAAHSRLVVYHENLDDPEGMVHIRDLLAFMAQRARTAMPSTAKR FT KKKTPPAGLDLRAIDLALPLSEADITRKLLYVPPSMPAIDLLAQMQASRIHLALVVDEYGGTDGLVSIEDIVEQVVGEID FT DEHDSDEPPSIVRQTENSFIADARASLEDVRAMIGEAFETGEAGEEVDTLGGFLVTYVGRLPVRGEVILGPGPFEIEVLD FT ADPRRVKRLRIGLRAERPPVRPRDGRRRENAPDATSQSQGDPASPSSPGDGGDPQ*" FT gene 16989..18116 FT /locus_tag="Nwi_0017" FT /colour=11 FT CDS 18113..19720 FT /locus_tag="Nwi_0018" FT /product="apolipoprotein N-acyltransferase" FT /note="TIGRFAM: Apolipoprotein N-acyltransferase: FT (1.4e-95)" FT /note="PFAM: Nitrilase/cyanide hydratase and FT apolipoprotein N-acyltransferase: (2.7e-05)" FT /note="SPTR top hit: 'P61036 Apolipoprotein FT N-acyltransferase (EC 2.3.1.-) (ALP N-acyltransferase). FT Rhodopseudomonas palustris., evalue=0.0, 73% identity FT hit'" FT /note="KEGG top hit: 'rpa:RPA0444 lnt EC=2.3.1.- FT category=Unassigned, evalue=0.0, 73.025048% identity hit'" FT /note="COGs: 'evalue=3e-91 score=329 category=M FT group=COG0815 Apolipoprotein N-acyltransferase'" FT /note="InterPro IPR003010:IPR004563" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="VSLSIAGSARTAGVAVTLSWGWKRAFVALASGAASSLAMEPFNAWPLLFVTFPVATWLIDGSAGRLRGVPAAALAGWLFG FT FGYFVPGLYWIGNAFLVDAQTFAWLIPFAVLGLPAYLALFTALGFALARFIWTTDASRILALAAALTISEWLRGHVLTGF FT PWNAFGYALTEPLALAQTASLIGLWGLTFIGVAIFASPAVLIDGGSRGRRPWLVPVTALMLLLAMSIYGSVRLSRHPTEF FT ADNVKLRIMQPNLAQDARFNYSAKAAVMQKYLALSDRATGPHSTGVSGATILIWPESAFPFFLTREADAMAEIADLLPKG FT TILMTGSVRAPDPSPNGRITRAFNSIYVIGDDGGILSIYDKLHLVPFGEFLPFQGLMEKLGFVQLTKVQGGFIPGKSRRT FT IELPNAPSVLPLICYEAIFPDGMQTRGGRPGWIVNLTNDGWFGISTGPHQHLQQARLRAIEQGLPLVRAANTGISVVTDP FT VGRIVARLDLGVESVLDSRLPVNMTPTPYARAGDIPAAIMVTMALVLVIRRRRGH*" FT gene 18113..19720 FT /locus_tag="Nwi_0018" FT /colour=9 FT misc_feature join(18236..18295,18314..18382,18425..18493,18530..18598,18641..18709,18746..18805,19631..19699) FT /colour=11 FT /locus_tag="Nwi_0018" FT /note="7 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 19954..20373 FT /locus_tag="Nwi_0019" FT /product="transcriptional regulator, XRE family" FT /note="PFAM: Helix-turn-helix motif: (1.3e-12)" FT /note="SMART: Helix-turn-helix motif: (1.7e-14)" FT /note="SPTR top hit: 'Q6NCM8 Possible transcriptional FT regulator, XRE family. Rhodopseudomonas palustris., FT evalue=2e-60, 86% identity hit'" FT /note="KEGG top hit: 'rpa:RPA0443 category=Unassigned, FT evalue=1e-60, 86.131387% identity hit'" FT /note="COGs: 'evalue=9e-09 score=52.8 category=K FT group=COG1396 transcriptional regulators'" FT /note="InterPro IPR001387" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MSTKAPNPVDKHVGSRVRMRRIMLGMSQEKLGEALGLTFQQVQKYEKGTNRVGASRIQQISEILQVPVSFLFEGSPGTGV FT VRTGGMSEAPSPAYVSDFLATSEGLALTRAFTRITDAKLRRSIVDMVEQIAAREPSDQR* FT " FT gene 19954..20373 FT /locus_tag="Nwi_0019" FT /colour=11 FT CDS 20396..21169 FT /locus_tag="Nwi_0020" FT /EC_number="2.1.1.33" FT /product="putative methyltransferase" FT /note="PFAM: Putative methyltransferase: (1.4e-46)" FT /note="SPTR top hit: 'Q89WA4 tRNA FT (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) FT (tRNA(m7G46)- methyltransferase). Bradyrhizobium FT japonicum., evalue=1e-91, 71% identity hit'" FT /note="KEGG top hit: 'bja:bll0788 EC=2.1.1.33 FT category=Unassigned, evalue=6e-92, 71.365639% identity FT hit'" FT /note="COGs: 'evalue=5e-48 score=184 category=R FT group=COG0220 S-adenosylmethionine-dependent FT methyltransferase'" FT /note="InterPro IPR003358" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="VTVVVSDHQNPRPPGDDAAPLGRTGNRDRPPGSFFGRRKGHRLRPHQNDLVAQLLPRLGFDPARIGPSGPAALFDPPVDE FT TRIEIGFGGGEHLVAEALAFPRAGFIGCEPYVNGMAKILVQIEAHAIRNIRLFAGDASQLLACLPPASLARIDLIHPDPW FT PKRRHWKRRFVQDATVAEMARVLRPEGEFRFVSDIDDYCAWTLTHLARSPDFLWLAERSADWQDPWSGYTMTRYGRKAMR FT EGRRAAYLRFRRERTAV*" FT gene 20396..21169 FT /locus_tag="Nwi_0020" FT /colour=11 FT CDS 21460..22242 FT /locus_tag="Nwi_0021" FT /product="Protein of unknown function DUF150" FT /note="PFAM: Protein of unknown function DUF150: FT (6.3e-49)" FT /note="SPTR top hit: 'Q89WA6 Hypothetical UPF0090 protein FT bll0786. Bradyrhizobium japonicum., evalue=8e-98, 71% FT identity hit'" FT /note="KEGG top hit: 'bja:bll0786 category=Unassigned, FT evalue=4e-98, 71.153846% identity hit'" FT /note="COGs: 'evalue=4e-34 score=138 category=S FT group=COG0779 Uncharacterized protein conserved in FT bacteria'" FT /note="InterPro IPR003728" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MTDPSAQNPDHELLDEPRLVVEPGVAARVAAIAAPVLQGMGYRLVRIKVSGEAGCTVQIMAERPDGSIQIEDCEAISKAL FT SPVLDVADPIDKAYRLEISSPGIDRPLVRRSDFERYAGHLAKIEMAVAHQGRKRFRGVLQGVEDNAVRLHRDDIRNNDDE FT SEVMLVMEDIADARLVLTDELIAESMRRGKIAEREMKQSLGILPPPPPHAKTDPAKRGTPKPKLENGKKAPGKIPPKNTK FT EHRLAAERLRRGDIDPIEGE*" FT gene 21460..22242 FT /locus_tag="Nwi_0021" FT /colour=13 FT CDS 22246..23862 FT /locus_tag="Nwi_0022" FT /product="transcription termination factor NusA" FT /note="TIGRFAM: Transcription termination factor NusA: FT (6.8e-184) Transcription termination factor NusA, FT C-terminal duplication: (2.1e-18)" FT /note="PFAM: RNA binding S1: (2.8e-07) KH, type 1: FT (0.025)" FT /note="SMART: RNA binding S1: (5.6e-13) KH: (0.00096)" FT /note="SPTR top hit: 'Q89WA7 N-utilization substance FT protein A. Bradyrhizobium japonicum., evalue=0.0, 89% FT identity hit'" FT /note="KEGG top hit: 'bja:bll0785 nusA FT category=Unassigned, evalue=0.0, 89.179104% identity hit'" FT /note="COGs: 'evalue=8e-52 score=198 category=K FT group=COG0195 Transcription elongation factor'" FT /note="InterPro FT IPR003029:IPR004087:IPR004088:IPR010213:IPR010214" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=6 FT /translation="MAAVSANKLELLQIADAVAREKTIDRGIVIAAMEDAIAKAARARYGSETDVHAEIHPKTGQLQLTRHMLVVEQVENAANQ FT ISLKDAQRANPGAQIGDTIADTLPPLEYGRISAQSAKQVIVQKVREAERDRQYQEFKDRIGDIVNGIVKRVEYGSVIVDL FT GRGEAVIRRDEMLPREVFRNGDRVRAYIFDVRRETRGPQIFLSRTHPQFMVKLFTQEVPEIYDGIVEIKAVARDPGSRAK FT IGVVSRDSSVDPVGACVGMRGSRVQAVVNELQGEKIDIIPWSPDIATFVVNALAPAEVAKVVIDEDRERIEVVVPDTNNQ FT LSLAIGRRGQNVRLASQLTGWDIDILTEQEESERRQADFENATRMFMETLNVDEVVGQLLASEGFTSVEELTLVDTREIA FT GIEGFDDETATELQNRAREYLEQLEAELENRRKELGVDDALKTVPGVTSKMLVKLGENEVRTIEDLAGCATDDLVGWTER FT KEGEAVKHAGYFDGIEISREDAEAIIMQARLSVGWINEADLAKPAEAEDIAAEDQPAE* FT " FT gene 22246..23862 FT /locus_tag="Nwi_0022" FT /colour=6 FT CDS 24107..24772 FT /locus_tag="Nwi_0023" FT /product="Protein of unknown function DUF448" FT /note="PFAM: Protein of unknown function DUF448: (2e-19)" FT /note="SPTR top hit: 'Q6NCN4 DUF448. Rhodopseudomonas FT palustris., evalue=1e-73, 67% identity hit'" FT /note="KEGG top hit: 'rpa:RPA0437 category=Unassigned, FT evalue=7e-74, 67.136150% identity hit'" FT /note="COGs: 'evalue=4e-15 score=75.0 category=K FT group=COG2740 nucleic-acid-binding protein implicated in FT transcription termination'" FT /note="InterPro IPR007393" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=6 FT /translation="MLAIADPADLDQGPRTNRSATARMCAVTRQVRPIGELIRFVVSPSGEVIADLKRKLPGRGLWISASHAAVAEAVRRNQFS FT RGFKRDVRVPASLAEDTRQLMVRSAMDALAMVAKAGQVVAGFAKVEDALLRRQAVALIHAADGAADGIRKLDAAVRKIAG FT QSGEAREIPVVTALNSAELDLALGRANVIHAALLAGPAGRTFLQRSQTLVRYQDGGQRQDS* FT " FT gene 24107..24772 FT /locus_tag="Nwi_0023" FT /colour=6 FT CDS 24841..27456 FT /locus_tag="Nwi_0024" FT /product="initiation factor 2" FT /note="TIGRFAM: Initiation factor 2: (1.9e-238) Small FT GTP-binding protein domain: (3.2e-30)" FT /note="PFAM: Protein synthesis factor, GTP-binding: FT (9e-50) GTP-binding protein, HSR1-related: (3.9e-09) FT Elongation factor Tu, domain 2: (2.4e-09) Translation FT initiation factor IF-2, N-terminal: (1.1e-17)" FT /note="SPTR top hit: 'Q6NCN5 Putative translation FT initiation factor if-2. Rhodopseudomonas palustris., FT evalue=0.0, 84% identity hit'" FT /note="KEGG top hit: 'rpa:RPA0436 infB FT category=Unassigned, evalue=0.0, 84.537246% identity hit'" FT /note="COGs: 'evalue=0.0 score=642 category=J FT group=COG0532 Translation initiation factor 2 (IF-2; FT GTPase)'" FT /note="InterPro FT IPR000178:IPR000795:IPR002917:IPR004161:IPR005225:IPR006847" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=7 FT /translation="MVDTKNPGDKTLSVSPTKTLTLKPRVEQGTVRQSFSHGRTKQVVVEKRGKRRIGGDSPGPEPAGTSEPASARTPAAKAPP FT ARAATPAAPRAGSGVVLRKLTEDERSARASALAEAKVRAEEERRIAEAEAARRNSKEGIEQAEREAAEARRKAEEERHRQ FT EEEAKRKAEIEAKRRFGQTESKPAPAKTTTTTTRAAPPARPAAVAADGSDEDEAPRLVRRPGGPARPVIAPKPAAKPAPA FT KQRGRLTLVTALSADDVRERSIASFRRRTQRLKGHASNEPKEKLVREVVVPEAITIQELANRMAERAVDVIRMLMKQGAM FT HKITDVIDADTAQLIAEELGHTVKRVAASDVEEGLFDVVDNSTDIEPRSPVVTVMGHVDHGKTSLLDALRHANVVSGEAG FT GITQHIGAYQVTSPESGKKITFIDTPGHAAFTAMRARGAKVTDLVILVVAADDGVMPQTIEAINHAKAAKVPMIIAINKI FT DKPEAKPERVRTELLQHEVQVESMGGQVVDVEVSAKNKTNLDKLLEMISLQADLLDLKTNASRPAEGTVIEAKLDRGRGP FT VATVLVQRGTLRVGDIIVAGAEMGRVRALISDQGETVNEAGPSVPVEVLGFNGPPEAGDRLAVVENEARARQVTSYRAHQ FT KRENAAASTSGMRGSLEQMMSQLKTVGRKDFPLIIKADVQGSLEAILGSLEKLGTDEVAARILHAGVGGISESDVTLAEG FT FNAAIIGFSVRANKEAAAAAKRNGIEIRYYNIIYDLVDDVKKAMSGLLAPTLRETMLGNAEILEVFNISKVGKVAGCRVT FT DGSVERGANVRLIRDNVVVHEGKLSTLKRFKDEVKEVQSGQECGMAFESYGDMRVGDVIECYRVETIQRSL* FT " FT gene 24841..27456 FT /locus_tag="Nwi_0024" FT /colour=7 FT CDS 27584..28024 FT /locus_tag="Nwi_0025" FT /product="ribosome-binding factor A" FT /note="TIGRFAM: Ribosome-binding factor A: (9.9e-10)" FT /note="PFAM: Ribosome-binding factor A: (4.2e-24)" FT /note="SPTR top hit: 'Q89WB0 Ribosome-binding factor A. FT Bradyrhizobium japonicum., evalue=6e-54, 78% identity FT hit'" FT /note="KEGG top hit: 'bja:bll0782 rbfA FT category=Unassigned, evalue=3e-54, 78.832117% identity FT hit'" FT /note="COGs: 'evalue=2e-20 score=91.4 category=J FT group=COG0858 Ribosome-binding factor A'" FT /note="InterPro IPR000238" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=7 FT /translation="MTSVFRRTFMPRRHQPEKHPGGSHRQLRVAETVRHAIADILAQGQVHDPVLEGHLVTVPEVRMSADLKLATIYVMPLGGR FT DTADVIDALDRNRKFLRGEIARRVNLKFAPDIRFRVDERFDEAERIEKLLRTPAVQRDLAPDTDES* FT " FT gene 27584..28024 FT /locus_tag="Nwi_0025" FT /colour=7 FT CDS 28031..29107 FT /locus_tag="Nwi_0026" FT /EC_number="4.2.1.70" FT /product="tRNA pseudouridine synthase B" FT /note="TIGRFAM: tRNA pseudouridine synthase B: (5.5e-80)" FT /note="PFAM: Pseudouridylate synthase TruB, N-terminal: FT (5.5e-53)" FT /note="SPTR top hit: 'P60345 tRNA pseudouridine synthase B FT (EC 5.4.99.-) (tRNA pseudouridine 55 synthase) (Psi55 FT synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate FT synthase). Rhodopseudomonas palustris., evalue=1e-164, 82% FT identity hit'" FT /note="KEGG top hit: 'rpa:RPA0434 truB EC=4.2.1.70 FT category=Metabolism; Nucleotide Metabolism; Pyrimidine FT metabolism [PATH:rpa00240] , evalue=1e-165, 82.865169% FT identity hit'" FT /note="COGs: 'evalue=1e-63 score=237 category=J FT group=COG0130 Pseudouridine synthase'" FT /note="InterPro IPR002501:IPR004510" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=7 FT /translation="MTTPDAAIDSKISDSNGADKNKSAADDNAFNAPGRKRHHNNQPRRDKRDVHGWVALDKPVGMTSTQAVAVVKRLFSAKRA FT GHAGTLDPLASGGLPIALGEATKTVPFVMDGRKRYRFTVAWGEERDTDDTEGRAVATSAERPTAEAIMALLPSFTGKIEQ FT IPPQYSAVKIQGERAYDLARDGEVVPLAPRPVEIHHLNLADHQDSGHSVFEAECGKGTYVRALARDMGRLLGCYGHICAL FT RRTLVGPFDETSMIPLEHLQALCDRAASGEGNLADALLPVETALDDIPALAVTRADAARLHRGQAVLLRGRDAPNMSGTV FT YVTVAGRLLALAELGNGELIPKRVFNLSGLTASPHRQG*" FT gene 28031..29107 FT /locus_tag="Nwi_0026" FT /colour=7 FT CDS 29114..29383 FT /locus_tag="Nwi_0027" FT /product="Ribosomal protein S15" FT /note="TIGRFAM: Ribosomal protein S15, bacterial FT chloroplast and mitochondrial type: (1.1e-39)" FT /note="PFAM: Ribosomal protein S15: (2.6e-30)" FT /note="SPTR top hit: 'Q6NCN7 30S ribosomal protein S15. FT Rhodopseudomonas palustris., evalue=4e-39, 92% identity FT hit'" FT /note="KEGG top hit: 'rpa:RPA0433 rpsO category=Genetic FT Information Processing; Translation; Ribosome FT [PATH:rpa03010] , evalue=2e-39, 92.134831% identity hit'" FT /note="COGs: 'evalue=3e-23 score=100 category=J FT group=COG0184 Ribosomal protein S15P/S13E'" FT /note="InterPro IPR000589:IPR005290" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=7 FT /translation="MSIAAERKAEVIKTSANKPGDTGSPEVQVAILSERIANLTAHFKIHTKDNHSRRGLLKLVSTRRSLLDYVKKKDEARYKALLEKHGIRR*" FT gene 29114..29383 FT /locus_tag="Nwi_0027" FT /colour=7 FT CDS 29730..31886 FT /locus_tag="Nwi_0028" FT /EC_number="2.7.7.8" FT /product="3'exoribonuclease" FT /note="PFAM: 3' exoribonuclease: (1e-48) 3' FT exoribonuclease: (5e-20) 3' exoribonuclease: (1e-27) RNA FT binding S1: (5.1e-20) KH, type 1: (2.9e-16)" FT /note="SMART: RNA binding S1: (1.6e-24) KH: (5.4e-15)" FT /note="SPTR top hit: 'Q6NCN8 Polyribonucleotide FT nucleotidyltransferase (EC 2.7.7.8). Rhodopseudomonas FT palustris., evalue=0.0, 94% identity hit'" FT /note="KEGG top hit: 'rpa:RPA0432 pnp EC=2.7.7.8 FT category=Metabolism; Nucleotide Metabolism; Purine FT metabolism [PATH:rpa00230] Metabolism; Nucleotide FT Metabolism; Pyrimidine metabolism [PATH:rpa00240] , FT evalue=0.0, 94.459834% identity hit'" FT /note="COGs: 'evalue=0.0 score=981 category=J FT group=COG1185 Polyribonucleotide nucleotidyltransferase FT (polynucleotide phosphorylase)'" FT /note="InterPro IPR001247:IPR003029:IPR004087:IPR004088" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=7 FT /translation="MFNQHSVEIDWGGRPLKLETGKIARQADGAVVATYGETVVLATVVAAKSPREGVDFLPLTVDYQEKTYAAGRIPGGYFKR FT EGRPTEKETLVSRLIDRPVRPLFADGWRNETQVIVTVLSHDMENDPDILAMVAASAALTLSGAPFKGPIGAARVGFINDE FT YVLNPTLDEIVDTQLDLVVAGTADAVLMVESEAKELSEEIMLKAVMFGHRHFQPVIDAIIELAEKAAKEPRELKVIDDTE FT IEKEMLGLVEQDLRAAYAIPVKQDRYAAVGKVKEKALAHFFPEGQEPKYDKLRVAGVFKELEAKIVRWNILDTGKRIDGR FT DVKTVRNIVAEAGVLPRAHGSALFTRGETQAMVVTTLGTGEDEQYIDSLAGTYKETFLLHYNFPPYSVGETGRLGGAKRR FT EIGHGKLAWRAIRPVLPPHHEFPYTIRVVSEITESNGSSSMASVCGASLSLMDAGVPLKRPTAGIAMGLILEGERYAVLS FT DILGDEDHLGDMDFKVAGTEAGITSLQMDIKIAGITEEIMKVALGQAKDGRIHILGEMSKALDRARAELGEHAPRIETFK FT IPTDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVASSDGESIKAAIKWIKSIASDPEVGEIYEGTVVKVMEFGAFV FT NFFGAKDGLVHISQLAAGRVQKTSDVVKEGAKVKVKLLGFDDRGKTRLSMKVVDQETGEDLEAKQKAEGDAPREAAGE* FT " FT gene 29730..31886 FT /locus_tag="Nwi_0028" FT /colour=7 FT CDS complement(32072..32986) FT /locus_tag="Nwi_0029" FT /product="regulatory protein, LysR" FT /note="PFAM: Transcriptional regulatory protein, LysR: (2.1e-20) FT LysR, substrate-binding: (3.9e-41)" FT /note="SPTR top hit: 'Q6NCP0 Hydrogen peroxide-inducible FT transcriptional regulator OxyR, LysR family. FT Rhodopseudomonas palustris., evalue=1e-116, 69% identity FT hit'" FT /note="KEGG top hit: 'rpa:RPA0430 oxyR FT category=Unassigned, evalue=1e-117, 69.934641% identity FT hit'" FT /note="COGs: 'evalue=3e-30 score=126 category=K FT group=COG0583 Transcriptional regulator'" FT /note="InterPro IPR000847:IPR005119" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=6 FT /translation="MVTLRQLRYLAALARHGHFGRAAEACAITQPALSMQIRELEQFLGVTLVERRPGEVMLTEIGREISRRAEDVLASVRDLV FT DFARHRGRPLTGRLTLGIIPSLAPYLLPRILPALQSQFPDLELELRETQTRLLVEEVKGGALDAAMLALPLGEPDIDTLE FT LFNDLFLLAVPASDPRPCGRRVAARDIDQSRLILLEDGHCLRDQALAFCATIPRGPSSGATGMTFGASSLATVMQMVAGG FT YGLTLIPQIAADVEARDERVKILRLQDPQPGRCIGLAFRRTSPRRADFAALGEVVKGCVAANGP* FT " FT gene complement(32072..32986) FT /locus_tag="Nwi_0029" FT /colour=6 FT CDS 33243..35432 FT /locus_tag="Nwi_0030" FT /EC_number="1.11.1.6" FT /product="haem catalase/peroxidase" FT /note="TIGRFAM: Fungal/archaeal/bacterial haem FT catalase/peroxidase: (0)" FT /note="PFAM: Haem peroxidase, plant/fungal/bacterial: FT (1.8e-115)" FT /note="SPTR top hit: 'Q6NCP1 Peroxidase/catalase (EC FT 1.11.1.6) (Catalase-peroxidase). Rhodopseudomonas FT palustris., evalue=0.0, 78% identity hit'" FT /note="KEGG top hit: 'rpa:RPA0429 katG EC=1.11.1.6 FT category=Metabolism; Amino Acid Metabolism; Tryptophan FT metabolism [PATH:rpa00380] Metabolism; Energy Metabolism; FT Methane metabolism [PATH:rpa00680] , evalue=0.0, FT 78.522572% identity hit'" FT /note="COGs: 'evalue=0.0 score=1173 category=P FT group=COG0376 Catalase (peroxidase I)'" FT /note="InterPro IPR000763:IPR002016" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MDAKTNDGKAGQCPFTSGRGHKNRDWWPEQLDVQVLHQKSNLSNPMGRDFDYASAFASLDLNAVIADLKALMTDSQDWWP FT ADFGHYGGLMVRMAWHSAGTYRITDGRGGAGGGQQRFAPLNSWPDNVLLDRARRLLWPIKQKYGRKISWADLYVLAGNAA FT LESMGFKPLGFAGGRVDEWEPQELFWGPEGAWLGDERYSGERELAEPLAAVQMGLIYVNPEGPNGQPDPLAAAKDIRETF FT LRMAMNDEETVALIAGGHTFGKTHGAGDASLVGPVPDSAPIEDQGLGWKGRFGTGKGADAIGSGLEVTWTQTPTKWDNNF FT FDTLFGFEWELTKSPAGAHQWRAKDAPAITPDPFDESKKHVPTMLTTDLSLRFDPIYGEISKRFHENPDQFADAFARAWF FT KLTHRDMGPRDRYLGPLVPKEVMIWQDPIPAVDHELVDDNDIADLKAKILASGCTVAQLVSTAWASASTFRGSDKRGGAN FT GARIRLAPQKDWEVNQPIQLKAVLAKLEEIQAEFNDAQTGGKKVSLADLIVLGGSAAVEKAARDAGIDLKVPFTPGRMDA FT SLDQTDVESFAPLEPRADGFRNYISDRHQFMAPEEALVDRAQLLNLTGPEMTVLVGGLRVLGANAADSRHGVFTTRPGKL FT TNDFFVNLLTMDTEWQPVAGQDGVYESRDRKTGTLKWTGTRVDLIFGSHSQLRAFAEVYACADSGEKFANDFAAAWAKVM FT NADRFDLKA*" FT gene 33243..35432 FT /locus_tag="Nwi_0030" FT /colour=9 FT CDS 35623..36219 FT /locus_tag="Nwi_0031" FT /EC_number="2.5.1.18" FT /product="glutathione S-transferase" FT /note="PFAM: Glutathione S-transferase, N-terminal: FT (4.8e-20)" FT /note="SPTR top hit: 'Q89WB9 Hypothetical glutathione FT S-transferase like protein. Bradyrhizobium japonicum., FT evalue=1e-87, 75% identity hit'" FT /note="KEGG top hit: 'bja:bll0773 category=Unassigned, FT evalue=5e-88, 75.252525% identity hit'" FT /note="COGs: 'evalue=2e-28 score=118 category=O FT group=COG0625 Glutathione S-transferase'" FT /note="InterPro IPR004045" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MMKLYWSPRSRSFTALWLMEETGQPYERVLIDISTGAQKTPEFLAVNPMGKVPALTDGAIAIAEAAAICAYVAERFPDAK FT LAPPLGDARRAKYLQWLFFGPSCIEPALLQIFAKLQVPSSTAAWGDATQVFDVLDKAVEKGPWILGDDFSAADIVIGSGL FT NFAIRQFKMVPPRPAFDRYIDRCVARPAFQRAEKIAAG*" FT gene 35623..36219 FT /locus_tag="Nwi_0031" FT /colour=9 FT CDS complement(36277..37110) FT /locus_tag="Nwi_0032" FT /EC_number="1.3.1.9" FT /product="short-chain dehydrogenase/reductase SDR" FT /note="PFAM: Short-chain dehydrogenase/reductase SDR: FT (0.00077)" FT /note="SPTR top hit: 'Q89WC1 NADH-enoyl acyl carrier FT protein reductase (EC 1.3.1.9). Bradyrhizobium japonicum., FT evalue=1e-115, 75% identity hit'" FT /note="KEGG top hit: 'bja:blr0771 fabI EC=1.3.1.9 FT category=Metabolism; Lipid Metabolism; Fatty acid FT biosynthesis (path 1) [PATH:bja00061] , evalue=1e-115, FT 75.849057% identity hit'" FT /note="COGs: 'evalue=1.0e-106 score=379 category=R FT group=COG0623 Enoyl-(acyl-carrier-protein)'" FT /note="InterPro IPR002198:IPR002347" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MTHLMQGKRGLIMGVANDHSIAWGIAKTLAAHGAEMAFTYQGEALAKRVRPLAESVGSTMVLPCDVEDIASVDKVFADIG FT KAWGKMDFLVHAIAFSDKAELNGRYADTTRENFARTMLISCFAFTEAAKRAAELMPDGGSMLTLTYNGGDRAMPNYNVMG FT VAKAGLEASVRYLAVDFGAQNIRVNAISAGPIRTLAGAGIGDARFMFAFQQKHSPRGRGVSLDELGGAGLYLLSDLSGGV FT TGEIHFVDSGYNIIAMPQPDALRSEGMSNGAPNDTAK*" FT gene complement(36277..37110) FT /locus_tag="Nwi_0032" FT /colour=11 FT CDS complement(37283..38506) FT /locus_tag="Nwi_0033" FT /EC_number="2.3.1.41" FT /product="beta-ketoacyl synthase3" FT /note="PFAM: Beta-ketoacyl synthase: (1.5e-51) FT Beta-ketoacyl synthase: (2.5e-50)" FT /note="SPTR top hit: 'Q89WC2 FT 3-oxoacyl-[acyl-carrier-protein] synthase I (EC 2.3.1.41). FT Bradyrhizobium japonicum., evalue=0.0, 91% identity hit'" FT /note="KEGG top hit: 'bja:blr0770 fabB EC=2.3.1.41 FT category=Metabolism; Lipid Metabolism; Fatty acid FT biosynthesis (path 1) [PATH:bja00061] , evalue=0.0, FT 91.625616% identity hit'" FT /note="COGs: 'evalue=1.0e-121 score=428 category=Q FT group=COG0304 3-oxoacyl-(acyl-carrier-protein) synthase'" FT /note="InterPro IPR000794" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MRRVVVTGMGIVSSIGNSTQEVLSSLFEAKSGITRAEKYAELGFRSQVQGAPTLNPADVVDRRAMRFLAEGAAWNHVAME FT QAIRDSGLEPNEVSNERTGIIMGSGGPSARTIVEAADITRSKGPKRVGPFAVPKAMSSTASATLATWFKIKGVNYSISSA FT CATSNHCIGNAYETIQIGKQDIIFAGGCEELDWSLSVLFDAMGAMSSKYNDTPATASRAYDVSRDGFVIAGGAGVVVLEE FT LEHAKARGARIYGEVAGYGATSDGYDMVAPSGEGAERCMRMALSTVKTKVDYINPHATSTPAGDPPEIEAIRKVFGAGDK FT CPPISATKSLTGHSLGATGVQEAIYSLLMMNNGFICESANITELDPVFADMPIVRKRIDDARIGTVMSNSFGFGGTNATL FT VFKRLDA*" FT gene complement(37283..38506) FT /locus_tag="Nwi_0033" FT /colour=9 FT CDS complement(38590..39114) FT /locus_tag="Nwi_0034" FT /EC_number="4.2.1.60" FT /product="beta-hydroxyacyl-(acyl-carrier-protein) FT dehydratase FabA" FT /note="TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) FT dehydratase FabA: (7.6e-104)" FT /note="PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) FT dehydratase FabA: (1.1e-72)" FT /note="SPTR top hit: 'P61450 FT 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC FT 4.2.1.60) (Beta-hydroxydecanoyl thioester dehydrase). FT Rhodopseudomonas palustris., evalue=5e-86, 87% identity FT hit'" FT /note="KEGG top hit: 'rpa:RPA0425 fabA EC=4.2.1.60 FT category=Metabolism; Lipid Metabolism; Fatty acid FT biosynthesis (path 1) [PATH:rpa00061] , evalue=3e-86, FT 87.356322% identity hit'" FT /note="COGs: 'evalue=7e-34 score=136 category=I FT group=COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl FT carrier protein) dehydratases'" FT /note="InterPro IPR010083" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=5 FT /translation="MQDRRSSYDYEGLLACGRGELFGPGNAQLPLPPMLMFDRITDINEDGGEFGKGLIRAELDVKPDLWFFGCHFKGDPVMPG FT CLGLDALWQMVGFFLGWTGGEGRGRALGLGELKFTGQVLPPVRKVVYNVDIKRVMRSKLVLGIADGWLSADDDIIYRAKD FT LKVGLFKQDAGPGA*" FT gene complement(38590..39114) FT /locus_tag="Nwi_0034" FT /colour=5 FT CDS 39551..40057 FT /locus_tag="Nwi_0035" FT /product="ferric-uptake regulator" FT /note="PFAM: Ferric-uptake regulator: (3e-16)" FT /note="SPTR top hit: 'O85719 Iron response regulator. FT Bradyrhizobium japonicum., evalue=4e-76, 85% identity FT hit'" FT /note="KEGG top hit: 'bja:bll0768 irr FT category=Unassigned, evalue=3e-76, 85.802469% identity FT hit'" FT /note="COGs: 'evalue=1e-21 score=96.2 category=P FT group=COG0735 Fe2+/Zn2+ uptake regulation proteins'" FT /note="InterPro IPR002481" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MPGVSTSENIVVVTEEDRDIAAIGHGRQPTLTGCPWHDVNEMLQSVGLRPTRQRMALGWLLFGKGARHLTAEMLYEEATL FT AKVPVSLATVYNTLNQLTDAGLLRQVSVDGTKTYFDTNVTAHHHFYLENNHELVDIPDPHLVLQKMPNVPEGYEISRIDM FT VVRLRKKR*" FT gene 39551..40057 FT /locus_tag="Nwi_0035" FT /colour=9 FT CDS complement(40312..40842) FT /locus_tag="Nwi_0036" FT /product="Protein of unknown function DUF1058" FT /note="PFAM: Protein of unknown function DUF1058: (9e-67)" FT /note="SPTR top hit: 'Q89WC4 Blr0767 protein. FT Bradyrhizobium japonicum., evalue=1e-70, 73% identity FT hit'" FT /note="KEGG top hit: 'bja:blr0767 category=Unassigned, FT evalue=6e-71, 73.255814% identity hit'" FT /note="COGs: 'evalue=2e-43 score=169 category=S FT group=COG3807 Uncharacterized protein conserved in FT bacteria'" FT /note="InterPro IPR010466" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MTVRWRVLSMVFAAATLGAVAIETTADAKDSALSTSGLPVPRYVSLKSDHVNVRAGPTKDNDVAWVYTKAGLPVEITAEF FT ENWRRIRDSEGAEGWVYHSLLSGRRTAVVTMKAKDDFTPLYDRADVQGNVAARLQAGVVTQVKRCAAGWCHVTGDGFDGW FT IEQQRLWGVYADEKIN*" FT gene complement(40312..40842) FT /locus_tag="Nwi_0036" FT /colour=13 FT sig_peptide complement(40777..40842) FT /colour=11 FT /locus_tag="Nwi_0036" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.997) with cleavage site probability FT 0.788 atresidue 22" FT CDS 41197..42198 FT /locus_tag="Nwi_0037" FT /EC_number="1.1.1.26" FT /product="D-isomer specific FT 2-hydroxyacid dehydrogenase" FT /note="PFAM: Oxidoreductase, N-terminal: (0.0016) D-isomer FT specific 2-hydroxyacid dehydrogenase, catalytic region: FT (7.8e-21) D-isomer specific 2-hydroxyacid dehydrogenase, FT NAD-binding: (1.1e-69)" FT /note="SPTR top hit: 'Q6NCP7 Possible dehydrogenase. FT Rhodopseudomonas palustris., evalue=1e-169, 87% identity FT hit'" FT /note="KEGG top hit: 'rpa:RPA0422 category=Unassigned, FT evalue=1e-170, 87.987988% identity hit'" FT /note="COGs: 'evalue=4e-89 score=321 category=R FT group=COG1052 Lactate dehydrogenase and related FT dehydrogenases'" FT /note="InterPro IPR000683:IPR006139:IPR006140" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MSIKKKPLVVVTRKLPDSVETRMRELFDARLNLDDRPMTPDELIDAVRTADILVTTVTDHINAAVLKQPDCKLKLIAQFG FT NGVDNIDVVAAHEHGVTVTNTPNVLTEDTADMTMALILAVPRRFIEGAALLTAGGDWPGWSPTWMLGRRLGGKRLGIIGM FT GRIGQAVARRAHAFGLQIHYHNRKPVAPKIADELGATYWDSLDQMLARMDIISVNCPHTPATFHLLSARRLKLIRKDAYI FT VNTARGTVIDEDTLTKLIEAGEIAGAALDVFEHEPAVNPRLVRLAKAGKVVLLPHMGSATIEGRVEMGEKVIINIRTFLD FT NHKPPDRVLPSML*" FT gene 41197..42198 FT /locus_tag="Nwi_0037" FT /colour=11 FT CDS complement(42286..43122) FT /locus_tag="Nwi_0038" FT /product="UBA/THIF-type NAD/FAD binding fold" FT /note="PFAM: UBA/THIF-type NAD/FAD binding fold: (8.1e-62) FT MoeZ/MoeB: (2.9e-30)" FT /note="SPTR top hit: 'Q6NDL9 Putative molybdenum cofactor FT biosynthesis protein. Rhodopseudomonas palustris., FT evalue=1e-116, 77% identity hit'" FT /note="KEGG top hit: 'rpa:RPA0086 moeB FT category=Unassigned, evalue=1e-117, 77.566540% identity FT hit'" FT /note="COGs: 'evalue=3e-67 score=248 category=H FT group=COG0476 Dinucleotide-utilizing enzymes involved in FT molybdopterin and thiamine biosynthesis family 2'" FT /note="InterPro IPR000205:IPR000594:IPR007901" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=12 FT /translation="VRRLIDGENGRTMLSADELERYSRHIVMREVGGPGQNALRNARVLMIGAGGLGAPALMYLAAAGVGTLGVIDDDVVTLSN FT LQRQIIHATPDIGSPKVESAADKIRALNPHVAFRAHHMRLDASNAMALLADYDIVAEGSDNFATRYLVADACFLAKKPLV FT TAALGVFDGSLTTIRAHEKNADGVFNPTYRCLFPEPPPEGTVPSCQQAGILGALAGVLGSMTALEVIREIVGFGEGLVGR FT LLMVDARAMRFETLNYRRDPSNPLNGDHPTITDLSGYC*" FT gene complement(42286..43122) FT /locus_tag="Nwi_0038" FT /colour=12 FT misc_feature complement(42925..42990) FT /colour=11 FT /locus_tag="Nwi_0038" FT /note="1 probable transmembrane helix predicted FT byTMHMM2.0" FT CDS 43206..44549 FT /locus_tag="Nwi_0039" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q6NDM0 Hypothetical protein FT precursor. Rhodopseudomonas palustris., evalue=1e-134, 55% FT identity hit'" FT /note="KEGG top hit: 'rpa:RPA0085 category=Unassigned, FT evalue=1e-134, 55.947137% identity hit'" FT /note="COGs: 'evalue=4e-05 score=42.9 category=O FT group=COG0265 Trypsin-like serine proteases typically FT periplasmic contain C-terminal PDZ domain'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MRATIAAVLMIVATTMYAQAQPGNPVGRTKGKPEAAVSPPAQTPADTVRAMASAARQALQSDLAWTGHYNGLINGEVSDR FT MIAAIKAFQKERAGKQTGVLNPQERGVLAAAARKARANVGWKIAADAATGVRLGLPMRLTPQQSSAGDGTTWSSSTGTIQ FT ISVTRRKESGLTTARLADHARKQSPGRKVTYSAVKPDVFVLSGTQGLKKFYMRGQLRDSEARILTILYDQATEGVMEPVV FT IAMSSAFDPFPANGPPPRKLVEYASGVIVSDGGAILTGHEATDGCRSIVVTGHGYADRIAGDKDHGLALLRVYGAHGLQP FT IPLGRAAAKGGVDLVGITDPQNQGGGSAISRVKASVSGGDGGELMLTPAPASGFSGAAALDANGKLAGLALVKPADIAGL FT SGATPPAQAVLAPAQALRAFLKANDLDPFDGSFDAEAAVVRVICVRR*" FT sig_peptide 43206..43268 FT /colour=11 FT /locus_tag="Nwi_0039" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 1.000 atresidue 21" FT gene 43206..44549 FT /locus_tag="Nwi_0039" FT /colour=13 FT CDS complement(44680..45561) FT /locus_tag="Nwi_0040" FT /EC_number="3.2.2.23" FT /product="formamidopyrimidine-DNA glycolase" FT /note="TIGRFAM: Formamidopyrimidine-DNA glycolase: FT (1.2e-97)" FT /note="PFAM: Formamidopyrimidine-DNA glycolase: (9.1e-32) FT Formamidopyrimidine-DNA glycolase: (1.5e-35)" FT /note="SPTR top hit: 'Q89WC9 Formamidopyrimidine-DNA FT glycosylase (EC 3.2.2.23) (Fapy-DNA glycosylase) FT (DNA-(apurinic or apyrimidinic site) lyase mutM) (EC FT 4.2.99.18) (AP lyase mutM). Bradyrhizobium japonicum., FT evalue=1e-132, 79% identity hit'" FT /note="KEGG top hit: 'bja:blr0762 EC=3.2.2.23 FT category=Unassigned, evalue=1e-132, 78.767123% identity FT hit'" FT /note="COGs: 'evalue=2e-84 score=306 category=L FT group=COG0266 Formamidopyrimidine-DNA glycosylase'" FT /note="InterPro IPR000191" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=2 FT /translation="LPELPEVETVRRGLQPAMEGATIVRAETRRKDLRFPFQTDFVARLEGQAVTGLGRRAKYLLADLASGDVLLMHLGMSGSF FT RVIDAAGVTVPGDFHRPRGEDRVHDHVRFTMSSRAEIVFNDPRRFGYMKIVARSALGDEPLLKGLGPEPLGNEFDAAVLA FT HGCRNRKTSLKAALLDQRVVAGLGNIYVCEALFRARLSPRRLAATLAMKTGAPSERAERLVGAIRDVLNQAIEAGGSSLR FT DHRQTTGELGYFQHSFQVYDREGDKCRTPACKGAVKRFTQNGRSTFWCPVCQT*" FT gene complement(44680..45561) FT /locus_tag="Nwi_0040" FT /colour=2 FT CDS 45682..46479 FT /locus_tag="Nwi_0041" FT /product="ubiquinone/menaquinone biosynthesis FT methyltransferase" FT /note="TIGRFAM: Ubiquinone/menaquinone biosynthesis FT methyltransferase: (4.5e-108)" FT /note="PFAM: UbiE/COQ5 methyltransferase: (5.9e-101)" FT /note="SPTR top hit: 'Q89WD0 Ubiquinone/menaquinone FT biosynthesis methyltransferase ubiE (EC 2.1.1.-). FT Bradyrhizobium japonicum., evalue=1e-124, 84% identity FT hit'" FT /note="KEGG top hit: 'bja:bll0761 ubiE EC=2.1.1.- FT category=Metabolism; Metabolism of Cofactors and Vitamins; FT Ubiquinone biosynthesis [PATH:bja00130] , evalue=1e-124, FT 84.980237% identity hit'" FT /note="COGs: 'evalue=2e-77 score=282 category=H FT group=COG2226 Methylase involved in ubiquinone/menaquinone FT biosynthesis'" FT /note="InterPro IPR000051:IPR001601:IPR004033:IPR004034" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=12 FT /translation="MAGYGPVMEKTGMDREDQTTHFGFRDVPLGDKQTLVNDVFHSVARRYDLMNDLMSGGLHRVWKDAMITTLNPPRNDAPFS FT LLDVAGGTGDIAFRAAKAAGSGFQATVCDINPDMLAVGRERATKQHRDHQVSFVEGNAETLAFADRGFDAYTIAFGIRNV FT PRIDAALREAFRVLRPGGRFLCLEFSTVDVPGLDKIYDLFSFKMIPPLGRAVTGDADSYRYLVESIRKFPKPNAFAEMIR FT DAGFARVSWQALSGGIVALHSGWRL*" FT gene 45682..46479 FT /locus_tag="Nwi_0041" FT /colour=12 FT CDS 46476..48056 FT /locus_tag="Nwi_0042" FT /product="2-polyprenylphenol 6-hydroxylase" FT /note="TIGRFAM: 2-polyprenylphenol 6-hydroxylase: FT (2.4e-201)" FT /note="PFAM: ABC-1: (3e-41)" FT /note="SPTR top hit: 'Q89WD1 Ubiquinone biosynthesis FT protein. Bradyrhizobium japonicum., evalue=0.0, 81% FT identity hit'" FT /note="KEGG top hit: 'bja:bll0760 aarF FT category=Metabolism; Metabolism of Cofactors and Vitamins; FT Ubiquinone biosynthesis [PATH:bja00130] , evalue=0.0, FT 81.573896% identity hit'" FT /note="COGs: 'evalue=1.0e-120 score=426 category=R FT group=COG0661 unusual protein kinase'" FT /note="InterPro IPR000719:IPR004147:IPR010232" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="VISALGHVARLARAAFVFAREGVFGVVDPSLVPAPGQLALRMARLIERRGAKSGSRLTRALTRLGPAYLKLGQFLATRPD FT VIGVAMARDLESLQDRLPPFSQAEAEAVVAAALEKPVADAFANFGPSVAAASIAQVHRGEVEKNGVRRQVAIKVLRPNVA FT TRFRRDLSDFFFVANNAEAHSAEARRLRLVEVINTMSRSVAMEMDLRLEAAALSEMAENTRNDPDFRVPEVDWDRTTHNV FT LTMEWIDGIALNDHARLAQSKADLPELGRKVIQSFLRHALRDGFFHADMHPGNLFLDGSGRLVAVDFGIMGRLGLKERRF FT LAEILLGFITRDYRRVAEVHFEAGYVPGHHSVENFAQAIRAIGEPIHNRTAEEISMAKLLTLLLEVTGLFDMQTRPELIL FT LQKTMVVVEGVARSFDPKLDIWTVADPVVREWITENLGPLGRMQGAIAGAGELGRLLASLPAIASRSVAVLEQVETMTRD FT GLVLAPETVATLACARARQNRWRTIALWIIAVTLLGILWAVSSRLI*" FT gene 46476..48056 FT /locus_tag="Nwi_0042" FT /colour=11 FT misc_feature 47985..48044 FT /colour=11 FT /locus_tag="Nwi_0042" FT /note="1 probable transmembrane helix predicted FT byTMHMM2.0" FT CDS 48119..49558 FT /locus_tag="Nwi_0043" FT /EC_number="4.1.1.36" FT /EC_number="6.3.2.5" FT /product="DNA/pantothenate metabolism flavoprotein" FT /note="TIGRFAM: DNA/pantothenate metabolism flavoprotein: FT (1.8e-124)" FT /note="PFAM: Flavoprotein: (7.2e-41) DNA/pantothenate FT metabolism flavoprotein, C-terminal: (2.2e-34)" FT /note="SPTR top hit: 'Q89WD2 Panthotenate metabolism FT flavoprotein. Bradyrhizobium japonicum., evalue=0.0, 70% FT identity hit'" FT /note="KEGG top hit: 'bja:bll0759 dfp EC=4.1.1.36 6.3.2.5 FT category=Metabolism; Metabolism of Cofactors and Vitamins; FT Pantothenate and CoA biosynthesis [PATH:bja00770] , FT evalue=0.0, 70.901639% identity hit'" FT /note="COGs: 'evalue=1.0e-100 score=358 category=H FT group=COG0452 Phosphopantothenoylcysteine FT synthetase/decarboxylase'" FT /note="InterPro IPR003382:IPR005252:IPR007085" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=12 FT /translation="MASLTVRKLDDAVKARLRARAAVSGRSVEEEIRVILREATVIPPPTAFDDPASRNAASLRDKGFFNVSSRLTKVTVIVGG FT GIAAYKALDLIRRLRERGFFVRCVMTNAAQQFVTPLSAGSLSNERCYTDLFDASSEFDAGHIRLARDCDLIVVAPATADL FT MAKMANGLANDLASAILLASDRPVLLAPAMNPLMWNNPATRRNVARLARDGVAMIGPDAGEMAEAGEAGVGRMAEPVAIA FT AAAARMLGPPQTQAQPLKGRRVLITAGPTREAIDPVRYIANRSSGKQGFAIAAAAQAAGAEVTLISGPVDLDDPPGVTVA FT HVESARQMLAAVEAALPSDIAIFTAAVADWRVAHAGAQKLKKTEAGVPPLQLIENPDILATISNLRDERPPLVIGFAAET FT EHLIGNAKAKFARKGCDWMIANDVSPGTGVMGGDRNTVHLLTRGEDGEIRTESFPVMTKEEVAAMLIERIISALPGPAA* FT " FT gene 48119..49558 FT /locus_tag="Nwi_0043" FT /colour=12 FT CDS 49555..50013 FT /locus_tag="Nwi_0044" FT /EC_number="3.6.1.23" FT /product="deoxyUTP pyrophosphatase subfamily 1" FT /note="TIGRFAM: DeoxyUTP pyrophosphatase subfamily 1: FT (1.1e-80)" FT /note="PFAM: DeoxyUTP pyrophosphatase: (3.2e-30)" FT /note="SPTR top hit: 'O52597 Deoxyuridine 5'-triphosphate FT nucleotidohydrolase (EC 3.6.1.23) (dUTPase) (dUTP FT pyrophosphatase). Bradyrhizobium japonicum., evalue=3e-57, FT 70% identity hit'" FT /note="KEGG top hit: 'bja:bll0758 dut EC=3.6.1.23 FT category=Metabolism; Nucleotide Metabolism; Pyrimidine FT metabolism [PATH:bja00240] , evalue=2e-57, 70.394737% FT identity hit'" FT /note="COGs: 'evalue=6e-46 score=176 category=F FT group=COG0756 dUTPase'" FT /note="InterPro IPR003232:IPR008180:IPR008181" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=16 FT /translation="MSDPIKVDVRQLPHAEGLPLPSYQSTQAAGLDLIAAIGEQAPLVLAAGRRAMVPTGLVIALPDGYEAQVRPRSGLAARHG FT VTVLNSPGTVDADYRGEINVLLVNLGSEAFTIRRGERIAQMIVAPVTRVELVRAAALPATPRGSGGFGSTGR* FT " FT gene 49555..50013 FT /locus_tag="Nwi_0044" FT /colour=16 FT CDS 50291..52807 FT /locus_tag="Nwi_0045" FT /product="Histidine kinase" FT /note="PFAM: ATP-binding region, ATPase-like: (2.4e-36) FT Histidine kinase A, N-terminal: (2.3e-19)" FT /note="SMART: PAS: (0.0028) ATP-binding region, FT ATPase-like: (4.6e-35) Histidine kinase A, N-terminal: FT (5.3e-20)" FT /note="SPTR top hit: 'Q89WD3 Two-component hybrid sensor FT and regulator. Bradyrhizobium japonicum., evalue=0.0, 72% FT identity hit'" FT /note="KEGG top hit: 'bja:bll0757 bdfA FT category=Unassigned, evalue=0.0, 72.195704% identity hit'" FT /note="COGs: 'evalue=3e-41 score=164 category=T FT group=COG2205 Osmosensitive K+ channel histidine kinase'" FT /note="InterPro FT IPR000014:IPR003594:IPR003661:IPR004358:IPR005467" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=15 FT /translation="MSGVIGVMRRTLLSCTSLVPGGIAGAGAVSLIDTSPAWAAEPALNERLIQAFMNLSRQDLTALAMALGVLSFSVVAAILL FT MRTRIRAAANEQRLRSELRELQSEADRFRALLFVEPQILISWGAGEERPQISGDIALLLPQDAKQPLRILAFGTWLPPEP FT ALQMDHAVDALRSAGEGFLLNLVTSAGRTVEAMGRAIGGQAIVRIRDLGGLRRDLAEMTLRHDSLLAETEMLRAFATAAP FT WPLWARGKDGKLSFANQAYARATEAADSADAIQRNLELLDSEDRTAMSRALNDHATFAARLPIIIGGERRMYDVHALRTG FT GGSAGIALDASEATALSGALARMADAHRRTLDQLSSGVAVFDGQRRLAFYNDSYRRLWDLDRPFLDGHPDDSSVLDRLRA FT GRKLPEQPDFRAWKARLHEAYRANEAVKDVWYLPDGRALSIVTTPNPEGGVTYLFDDVTESLDLARRYDRLINVQRETLD FT SLTEAVAVFGSNGRAQLFNPAFARMWKLSPEALAQQPHIDTVEAWCKPLFDDDDAWRTIHKAVTGIDNRTAVPLKLERKD FT GSILDCMTMPLPDGATMLTFHDITDSENVERALRERNDALEAADQMKVDFVHHVSYELRSPLTTIIGFAHLMNDPGTGPL FT TEKQAEYVNYITSSTDALLALTNNILDLATIDAGAMTLELGPVDVRKTIAAAAEGIQDRLTRDRIVLNVDVDPDIGDFIG FT DERRIIQVLYNLLANAAGFSPPDAVITVSARRTEHSVRFAVMDEGPGIPPDVRDKAFDWFESYANGSRHRGAGLGLSLVR FT SFVELHGGRVHFDPAIKSGTRVVCDFPLDRGAHRNAAE*" FT sig_peptide 50291..50410 FT /colour=11 FT /locus_tag="Nwi_0045" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.960) with cleavage site probability FT 0.852 atresidue 40" FT gene 50291..52807 FT /locus_tag="Nwi_0045" FT /colour=15 FT misc_feature 50468..50527 FT /colour=11 FT /locus_tag="Nwi_0045" FT /note="1 probable transmembrane helix predicted FT byTMHMM2.0" FT CDS 52804..54327 FT /locus_tag="Nwi_0046" FT /product="Protein of unknown function UPF0079" FT /note="TIGRFAM: Protein of unknown function UPF0079: FT (6.3e-21)" FT /note="PFAM: Aminoglycoside phosphotransferase: (2.8e-21) FT Protein of unknown function UPF0079: (1.8e-28)" FT /note="SPTR top hit: 'Q89WD4 Bll0756 protein. FT Bradyrhizobium japonicum., evalue=0.0, 72% identity hit'" FT /note="KEGG top hit: 'bja:bll0756 category=Unassigned, FT evalue=0.0, 72.871287% identity hit'" FT /note="COGs: 'evalue=9e-83 score=301 category=R FT group=COG3178 phosphotransferase related to Ser/Thr FT protein kinases'" FT /note="InterPro IPR000194:IPR002575:IPR003442" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MSEPSRFATALVNETATAHLMADLALLIGPGDVITLSGDLGAGKTAAARALIRYLAGDDTIEVPSPTFTLAQHYDLPPHP FT LLHADLYRISGPGELDEIGLAPLPEDAVVLIEWPERAAGGLPADRIDIAISHRPALGSAARSAEITGYGKAASQVARLAS FT LRRFLDDAGYLDARRQRMAGDASTRSYARLIRDDASFILMNAPKRPDGPAIHDGKSYSAAVHLAEDIKPFVAIAHGLRGQ FT GFSAPEIHHADLESGFLITEDFGSAGFVEGTPPAPIVERYQAATDLLAALHGRTLPDTLPLTADTAYAIPAFDLEAMLIE FT VGLMLDWYLIDRGIEPDEGLRAEFLAIWRALLAKPDAASRTWVLRDFHSPNLIWLEQRRDIGKVGIIDFQDTVLGPDAYD FT LVSLLQDARVDVPESIELALLARYAKARLECEAHFDPAGFAETYAIISAQRNTRLLGTFARLNRRDGKPHYLRHQPRIWT FT YLTRSLAHPALSAARAWYRNHVPPPAG*" FT gene 52804..54327 FT /locus_tag="Nwi_0046" FT /colour=11 FT CDS 54432..54752 FT /locus_tag="Nwi_0047" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q89WD5 Bll0755 protein. FT Bradyrhizobium japonicum., evalue=4e-39, 81% identity FT hit'" FT /note="KEGG top hit: 'bja:bll0755 category=Unassigned, FT evalue=2e-39, 81.720430% identity hit'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MGTERRKGERVTFERGYSAHMMGIDGTWRRNCTMEDVSEIGAKLTVEGSIEGLHLKEFFLLLSSTGLAYRRCELAWVNGD FT QIGVNFLKQTDKKKKTTRQNSATADA*" FT gene 54432..54752 FT /locus_tag="Nwi_0047" FT /colour=13 FT CDS 55254..55979 FT /locus_tag="Nwi_0048" FT /EC_number="2.7.7.13" FT /product="nucleotidyl transferase" FT /note="PFAM: Nucleotidyl transferase: (5e-10)" FT /note="SPTR top hit: 'Q89WD6 Nucleotidyltransferase family FT protein. Bradyrhizobium japonicum., evalue=1e-104, 77% FT identity hit'" FT /note="KEGG top hit: 'bja:bll0754 galF FT category=Unassigned, evalue=1e-105, 77.405858% identity FT hit'" FT /note="COGs: 'evalue=1e-40 score=160 category=J FT group=COG1208 Nucleoside-diphosphate-sugar FT pyrophosphorylase involved in lipopolysaccharide FT biosynthesis/translation initiation factor 2B FT gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)'" FT /note="InterPro IPR005835" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=7 FT /translation="MPTTPTKAMVLAAGLGLRMRPLTERMPKPMVPVAGKPLLDHVLDRLADAGVSEAVVNVRYLPDQIIDHVAHRDRPKIIIS FT DERDQVLGTGGAVVKALPLLGDAPFFHLNADTIWIDGARPNLTRLTEAFDPASMDILLLMAPTASSIGYSGSGDYAMLPN FT GALRRRQENQIVPFVYAGAAILSPALFDGAPAGEFPLTAIFDRAGERDRLFGLRLDGVWMHVGTPDAVQAAEKAVLASLD FT A*" FT gene 55254..55979 FT /locus_tag="Nwi_0048" FT /colour=7 FT CDS 56100..59261 FT /locus_tag="Nwi_0049" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q89WD7 Bll0753 protein. FT Bradyrhizobium japonicum., evalue=0.0, 66% identity hit'" FT /note="KEGG top hit: 'bja:bll0753 category=Unassigned, FT evalue=0.0, 66.446125% identity hit'" FT /note="COGs: 'evalue=1.0e-102 score=368 category=L FT group=COG3893 Inactivated superfamily I helicase'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MRVRNVPSSVPFLRAVITALVDGELIEGFRPRAQPERLAEATLYLPTRRAGRMARDIFLDVLDTDAVILPRIVALGGIDE FT DELAFAQAVSLPPETLELPPALDGLARRLALAQLIDAWARRLNLGDGEPARAPLVLGGPASTLTLAADLARLMDDMATRG FT VDWRALDGLVPEALDRYWQITLDFLKIARDYWPAHLQETGRIEPAARRDRLIEAEAARLAAHHVGPVIAAGSTGSMPSTA FT KLLHAIATLPQGAVVLPGLDTDLDEEAWRLIGGVRDKASGAFITPPAAGHPQFALHGLLARFGIKRSEVKALGFPAPYGR FT EMLASEAMRPAEATAQWHTRLAEPEVADKIAAGLQNLAVIAAANPEMEALGIAVAMREARDLNKTAALVTFDRALARRVM FT AALGRWNLAFDDSGGDPLMDTPAGIFARLAAETACNGLEPPTLLALLKHPLCRLGRAAGGWSRAIIALELAILRGPRPPP FT GGKGLADEFARFCDERDQLDRGESSSLHRSEPRAALKPDHLDDISALIAALRDALAPLEGDGASRSADFTLLALQHRQTI FT ESLSCDDEGVAVAFDGRHGRALADAFDDLVDAGERSGLTVRIADYPETFEAAFGDRVVRRPQATSASLRIYGPLEARLTQ FT CDRVILGGLTEGVWPPAPPTDPWLSRPMRHELGLDLPERRIGLSAHDFTQLFGAEEVILSHAAKAAGAPAVASRFLHRLE FT AVAGATRWTSAKQAGARYIQYAEALDRPSEVTPIAQPAPKPPRTARPTRLSVTAIEDWLRDPYTIYARYILKLLPLEAVD FT MPLSAADRGSAIHDALGDFTKRYPASLPDDPEDVLRAIGESRFAPLMQRPEARALWWPRFQRIAAWFAEWEPTRRAHLVR FT IDAEVSGKIEIPIDGDRRFTLSARADRIEHLGGGRFAVLDYKTGSPPSSKQVRLGLSPQLTLESAILRNGGFAGIPPGAS FT VSELVYVRLSGNNPAGEPRPVDLDNGKTATRSPDQAADVALEELTALIRAFDDEQQGYASLDLPMWKARYGVYDDLARIK FT EWSAAGGPGSEEW*" FT gene 56100..59261 FT /locus_tag="Nwi_0049" FT /colour=13 FT CDS 59255..62863 FT /locus_tag="Nwi_0050" FT /product="UvrD/REP helicase" FT /note="PFAM: UvrD/REP helicase: (2.6e-38)" FT /note="SPTR top hit: 'Q89WD8 Bll0752 protein. FT Bradyrhizobium japonicum., evalue=0.0, 63% identity hit'" FT /note="KEGG top hit: 'bja:bll0752 category=Unassigned, FT evalue=0.0, 63.560732% identity hit'" FT /note="COGs: 'evalue=1.0e-151 score=529 category=L FT group=COG1074 ATP-dependent exoDNAse (exonuclease V) beta FT subunit (contains helicase and exonuclease domains)'" FT /note="InterPro IPR000212" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=2 FT /translation="MVKAPRPVHPDASARQQRASDPATSVFVSANAGSGKTHVLVQRVIRLLLNDVDPARILCITFTKAAAANMAERVFSTLGH FT WVTLDDEALNGALRDVGIAQPGARWRERARKLFASALETPGGLKVQTIHALCTRLLQQFPFEAEVPARFTVLDERDQTEM FT MERASLKVMLDASQDPDSPSGLALRYAMSAATDSTLRDVLNQACLSRDHALTQTDDRGIAQAIRDAADALGVDPAERVED FT VEREIVDGPNLPRSKWLDTAALIATGSSNDVKQAERLRAAHAEAGDAARADRYLDVFLTGDGSPRKSFVTRKISDARPDV FT AEMLADECQRVIALLGRRRAINIRDRTQSLLVIAAAVAAHYRREKHERGLLDYDDLIDKTLRMLEQTSPGWVHYKLDRGV FT DHVLIDEAQDTSPKQWDIVERIIADFTTGEGAREGVRRTVFAVGDEKQSIFSFQGAAPREFDERRRKLERKFTDAKLPFR FT KEDFIYSFRSGKTILESVDHVFRDPAIYASIHAVGAHPVHESLADAAPGIVDLWSLEERDKREEMEGWRAPFDAVTATSP FT EVKLARRIRDEIKSLIAQGAMTGHLGNRRPLGYGDILVLVRRRGNAFDAVIQALKQSGIPVAGADRLKLTEHIAIIDLMN FT LADALLLPRDDLALAVALKSPLFGLDDDDLFKLAWQRKGTLRDALAGHATADDKFRDAFESLKRCESRAARDTPFAFFAW FT LLGEEAGRRRILRRLGHEANDALDEFLELALTCERKAPASLQGFMAWLRAADTEVKRDMEISRDEVRVMTVHGAKGLEAS FT VVFLADTSTSPADTERLSLIRMGRGNAPAGVAGVTIWAGRKAEDPPCVAQARAAMTAETEHEYRRLLYVAMTRAADRLIV FT GGCKPANRKDVREFSWYHLIEKGLANSGLAMQEIETASGKVKRFTRPDHDDPGSNRSRIMNVIDSNILERDAGGKPLHTF FT PHPALEEAEPDAAGPAPPASPGATRIPLPPWLHLAAAPEAPARRSLYPSDADEAAHQRAPAGAIPDQRHRARLRGTLVHR FT LLQSLPEVPRDRRREAALSYLGRNASGWGKTEHDALAARVVAVLDDARFAPVFAEGSRAEVAIVGRLTTRRGDPLPVSGQ FT IDRLVVTPHGVLVVDYKTSPAPASLADVPPAYIRQLALYRAMLAGLYPELPVNAALLWTETPEMMEISASTLDAALEAII FT SV*" FT gene 59255..62863 FT /locus_tag="Nwi_0050" FT /colour=2 FT CDS 62959..63279 FT /locus_tag="Nwi_0051" FT /EC_number="5.3.4.1" FT /product="thioredoxin" FT /note="TIGRFAM: Thioredoxin: (1.8e-59)" FT /note="PFAM: Thioredoxin-related: (2e-46)" FT /note="SPTR top hit: 'Q89WD9 Thioredoxin C-1. FT Bradyrhizobium japonicum., evalue=1e-47, 85% identity FT hit'" FT /note="KEGG top hit: 'bja:bll0751 trxA FT category=Unassigned, evalue=7e-48, 85.849057% identity FT hit'" FT /note="COGs: 'evalue=2e-24 score=104 category=O FT group=COG3118 Thioredoxin domain-containing protein'" FT /note="InterPro IPR005746:IPR006662:IPR006663" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MAVGKVSDANFEAEVLKATGPVVVDFWAEWCGPCRMIGPVLDEISSAMGSKVKIVKLNVDESPRTASKYGVMSIPTLMIF FT KDGELASRQVGAAPKQKLEQWITATV*" FT gene 62959..63279 FT /locus_tag="Nwi_0051" FT /colour=9 FT CDS complement(63475..64803) FT /locus_tag="Nwi_0052" FT /EC_number="6.3.2.17" FT /product="folylpolyglutamate synthetase" FT /note="TIGRFAM: Folylpolyglutamate synthetase: (5.1e-133)" FT /note="SPTR top hit: 'Q89WE2 Folylpolyglutamate synthase. FT Bradyrhizobium japonicum., evalue=1e-179, 71% identity FT hit'" FT /note="KEGG top hit: 'bja:blr0748 folC EC=6.3.2.12 FT 6.3.2.17 category=Metabolism; Metabolism of Cofactors and FT Vitamins; Folate biosynthesis [PATH:bja00790] , FT evalue=1e-180, 71.853547% identity hit'" FT /note="COGs: 'evalue=1.0e-105 score=374 category=H FT group=COG0285 Folylpolyglutamate synthase'" FT /note="InterPro IPR001645" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=12 FT /translation="VSAVPPRQSPLDDAVARISKLHPKRIDLTLGRMWRVLERLDHPERRLPPVIHVAGTNGKGSTVAYLRAILEAAGLRVHVF FT TSPYLVRINECVRLAGTLVADDALRDALLECERANGGEPLTLFEIKTAAAFLLFARSPADVLLLEVGLGGRLDSTNVVET FT PLASVITPVGIDHVEFLGGSLAEIAGEKAGIIKPGVPVICAEQSPEAEVVIEQRAKRMRSPLHAAGQHWHVHAEHGRLVY FT QDESGLLDLAAPRLFGRHQFDNAGLAIATLRAQDRFSIETTAFERGVTGAEWPARMQRLTSGRIVDQAPRDAELWLDGGH FT NADGGRIAAAALGDLEERVSRPLVVITGMMGNKDAKGFLANFAGLTRHVIAVPIPNMENAMPPEVLAEAVRALDMRAETA FT VSVAAALRSVARLAYEIPPRILITGSLYLAGHVLSENGTPPA*" FT gene complement(63475..64803) FT /locus_tag="Nwi_0052" FT /colour=12 FT CDS complement(64800..65759) FT /locus_tag="Nwi_0053" FT /EC_number="6.4.1.2" FT /product="acetyl-CoA carboxylase carboxyl transferase, FT beta subunit" FT /note="TIGRFAM: Acetyl-CoA carboxylase carboxyl FT transferase, beta subunit: (1.5e-127)" FT /note="SPTR top hit: 'Q6NDN4 Acetyl-CoA carboxylase FT carboxyltransferase beta subunit (EC 6.4.1.2). FT Rhodopseudomonas palustris., evalue=1e-149, 79% identity FT hit'" FT /note="KEGG top hit: 'rpa:RPA0071 accD EC=6.4.1.2 FT category=Metabolism; Lipid Metabolism; Fatty acid FT biosynthesis (path 1) [PATH:rpa00061] Metabolism; FT Carbohydrate Metabolism; Pyruvate metabolism FT [PATH:rpa00620] Metabolism; Carbohydrate Metabolism; FT Propanoate metabolism [PATH:rpa00640] , evalue=1e-149, FT 79.939210% identity hit'" FT /note="COGs: 'evalue=1.0e-113 score=400 category=I FT group=COG0777 Acetyl-CoA carboxylase beta subunit'" FT /note="InterPro IPR000438:IPR001202" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=5 FT /translation="MNWLTNVVRPKIRNILKRETPDNLWIKCPDTGQLVFYKDVESNQFVIPGSNYHMRMSADARLKSIFDNETWYDVALPEVT FT ADPLKFRDERKYVDRIRDARAKTGLHDSVKVGFGRLEGSAVVVAVQDFDFMGGSLGMAAGEAIVRGLELAVEKRCPFIVF FT AASGGARMQEGVLSLMQLPRTTVAVQMLREARQPYIVVLTNPTTGGVTASYAMLGDVQIAEPGALIGFAGARVIEQTIRE FT KLPDGFQRAEYLRDHGMIDLVVHRHELRPTLARVCRLLTKAPEMIEQEPEPSAPVPPDEPDEPAATQEAPPAAPAAPPA* FT " FT gene complement(64800..65759) FT /locus_tag="Nwi_0053" FT /colour=5 FT CDS complement(66066..66902) FT /locus_tag="Nwi_0054" FT /EC_number="4.2.1.20" FT /product="tryptophan synthase, alpha chain" FT /note="TIGRFAM: Tryptophan synthase, alpha chain: FT (1.7e-76)" FT /note="PFAM: Tryptophan synthase, alpha chain: (1.5e-117)" FT /note="SPTR top hit: 'Q89WE4 Tryptophan synthase alpha FT subunit. Bradyrhizobium japonicum., evalue=1e-124, 79% FT identity hit'" FT /note="KEGG top hit: 'bja:blr0746 trpA EC=4.2.1.20 FT category=Metabolism; Amino Acid Metabolism; Phenylalanine, FT tyrosine and tryptophan biosynthesis [PATH:bja00400] , FT evalue=1e-124, 79.496403% identity hit'" FT /note="COGs: 'evalue=7e-85 score=307 category=E FT group=COG0159 Tryptophan synthase alpha chain'" FT /note="InterPro IPR002028:IPR003009" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=10 FT /translation="VTTRIDTRFAELRKQGRSAFVTFLMAGDPDPATSLAIIKALPRAGADIIEIGMPFTDPMADGPAVQAAGRRALDAGMTLT FT GTLRMIGEFRKDDDSTPVVLMGYYNPVYIYGVEKFLDDARAAGVDGLIVVDLPPEEDSELCIPAMKAGLNFIRLATPTTD FT DKRLPAVLANTSGFVYYVSITGITGSAAADSTAVGAAVGRIKRHTSLPVCVGFGIRTPDAARGIAERSDGAVVGSALVDA FT LSASLDAEGKATSGTVQAVASLAAALAEGVRSARQAAE*" FT gene complement(66066..66902) FT /locus_tag="Nwi_0054" FT /colour=10 FT CDS complement(66899..68143) FT /locus_tag="Nwi_0055" FT /EC_number="4.2.1.20" FT /product="tryptophan synthase, beta chain" FT /note="TIGRFAM: Tryptophan synthase, beta chain: FT (3.6e-269)" FT /note="PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta FT subunit: (9.6e-121)" FT /note="SPTR top hit: 'Q89WE5 Tryptophan synthase beta FT chain (EC 4.2.1.20). Bradyrhizobium japonicum., FT evalue=0.0, 85% identity hit'" FT /note="KEGG top hit: 'bja:blr0745 trpB EC=4.2.1.20 FT category=Metabolism; Amino Acid Metabolism; Phenylalanine, FT tyrosine and tryptophan biosynthesis [PATH:bja00400] , FT evalue=0.0, 85.121951% identity hit'" FT /note="COGs: 'evalue=0.0 score=680 category=E FT group=COG0133 Tryptophan synthase beta chain'" FT /note="InterPro IPR001926:IPR006653:IPR006654" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=10 FT /translation="MSSLPNSFRSGPDERGHFGMFGGRFVAETLMPLILDLERAYADAKSDAAFQRDMARYRKDYIGRPSPLYFAERLTDHLRE FT ISAASGGAGGAKIYLKREELNHTGSHKVNNVLGQILVARRMGKKRIIAETGAGQHGVATATLCARFGLDCVVYMGAVDVA FT RQEPNVIRMEMLGAKVVPVQSGTRTLKDAMNEALRDWVTNVHDTFYCIGTVAGPHPYPMMVRDFQSIIGEETRRQMQEAE FT GRLPDSLIACIGGGSNAMGLFHPFLDESSVEIFGVEAAGHGLDKQHAASLTGGRPGVLHGNRTYLLMNGDGQIEDAHSIS FT AGLDYPGIGPEHSWLHETGRVTYLSATDEEALGAFQLLSRLEGIIPALESAHAIARVIELAPGRTKDHLMVVNLSGRGDK FT DVPQVGDILKGRKK*" FT gene complement(66899..68143) FT /locus_tag="Nwi_0055" FT /colour=10 FT CDS complement(68285..68962) FT /locus_tag="Nwi_0056" FT /EC_number="5.3.1.24" FT /product="N-(5'phosphoribosyl)anthranilate isomerase)" FT /note="PFAM: N-(5'phosphoribosyl)anthranilate isomerase FT (PRAI): (1.6e-49)" FT /note="SPTR top hit: 'Q89WE6 N-(5'-phosphoribosyl) FT anthranilate isomerase. Bradyrhizobium japonicum., FT evalue=8e-82, 70% identity hit'" FT /note="KEGG top hit: 'bja:blr0744 trpF EC=5.3.1.24 FT category=Metabolism; Amino Acid Metabolism; Phenylalanine, FT tyrosine and tryptophan biosynthesis [PATH:bja00400] , FT evalue=4e-82, 70.319635% identity hit'" FT /note="COGs: 'evalue=3e-53 score=201 category=E FT group=COG0135 Phosphoribosylanthranilate isomerase'" FT /note="InterPro IPR001240" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=10 FT /translation="MSLIVKICGLSTPSTLDVALQAGADMVGFVFFPPSPRHLELARAQELGAQVRGRAAKVALTADADDETLCGIIEALRPDL FT LQLHGKETVPRIREIKRRFGLPVMKAIGVEIAADLADLPRYAAVADRLLFDARPPKHATRPGGLGVPFDWRLLTNLSVDI FT PFMLSGGLAAGNVDDAVRITRAGGVDVSSGVESAPGVKDAGMVRDFIRAARAAETSLREATSHVP* FT " FT gene complement(68285..68962) FT /locus_tag="Nwi_0056" FT /colour=10 FT CDS complement(69176..69523) FT /locus_tag="Nwi_0057" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q89WE7 Blr0743 protein. FT Bradyrhizobium japonicum., evalue=9e-29, 62% identity FT hit'" FT /note="KEGG top hit: 'bja:blr0743 category=Unassigned, FT evalue=4e-29, 62.244898% identity hit'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MRKFLTGLILIPLGVIFIVFAFANRRLVTVTFDPFGGSDPQTGVTLPLFILIISVAIFGVVAGSVATWVGQRRWRYAARQ FT YESDARKAHVELADLRSRYESQEVTRLPELTRRAG*" FT gene complement(69176..69523) FT /locus_tag="Nwi_0057" FT /colour=13 FT misc_feature complement(join(69326..69391,69437..69502)) FT /colour=11 FT /locus_tag="Nwi_0057" FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(69452..69523) FT /colour=11 FT /locus_tag="Nwi_0057" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.996) with cleavage site probability FT 0.706 atresidue 24" FT CDS complement(69770..70075) FT /locus_tag="Nwi_0058" FT /product="integration host factor, beta subunit" FT /note="TIGRFAM: Integration host factor, beta subunit: FT (3.8e-57)" FT /note="PFAM: Histone-like bacterial DNA-binding protein: FT (2.1e-44)" FT /note="SMART: Histone-like bacterial DNA-binding protein: FT (3.3e-44)" FT /note="SPTR top hit: 'Q89WE8 Integration host factor FT beta-subunit (IHF-beta). Bradyrhizobium japonicum., FT evalue=3e-46, 96% identity hit'" FT /note="KEGG top hit: 'bja:blr0742 ihfB FT category=Unassigned, evalue=1e-46, 96.808511% identity FT hit'" FT /note="COGs: 'evalue=5e-27 score=112 category=L FT group=COG0776 Bacterial nucleoid DNA-binding protein'" FT /note="InterPro IPR000119:IPR005685" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=2 FT /translation="MIKSELVQRIAEHNPHLYQRDVENIVNAILDEIVAALARGDRVELRGFGAFSVKHRPARAGRNPRTGEHVPVDQKSVPFF FT KTGKEMRERLNRDNATSEANA*" FT gene complement(69770..70075) FT /locus_tag="Nwi_0058" FT /colour=2 FT CDS complement(70241..71224) FT /locus_tag="Nwi_0059" FT /product="peptidase S49, SppA" FT /note="TIGRFAM: Peptidase S49, SppA: (7.8e-66)" FT /note="PFAM: Peptidase S49: (6.8e-44)" FT /note="SPTR top hit: 'Q6NDP0 Putative protease IV FT precursor. Rhodopseudomonas palustris., evalue=1e-130, 74% FT identity hit'" FT /note="KEGG top hit: 'rpa:RPA0065 sppA EC=3.4.21.- FT category=Unassigned, evalue=1e-131, 74.613003% identity FT hit'" FT /note="COGs: 'evalue=2e-49 score=189 category=U FT group=COG0616 Periplasmic serine proteases (ClpP class)'" FT /note="InterPro IPR002142:IPR004635" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MSMSMESDMIVDRRRLRRKLTFWRVASALIVIGAVVALGAYASPLGGRLTGSSAIQRVNIDGLIRSDQKRVEALERLGKS FT KAPAVIVHINSPGGTTAGSEELYEALTRLKAKKPMVVVVEGLGASGGYIAALASDHIVAQQTALVGSIGVLFQYPNVTEL FT LKTVGVKVEAVKSSPLKAAPSGYEPTSPEARAAIDALVKDSFAWFRGLVQNRRGMDDAQLEKVADGRVFTGRQALDLKLI FT DQLGDEKVAIAWLVAEKKVAPDLPVRDFKLTPRFTDLTFIRTAASVAFDALGLGSIARQVEQAGIVRAADRLNLDGMLAL FT WHPAPSN*" FT gene complement(70241..71224) FT /locus_tag="Nwi_0059" FT /colour=9 FT sig_peptide complement(71096..71224) FT /colour=11 FT /locus_tag="Nwi_0059" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.998) with cleavage site probability FT 0.989 atresidue 43" FT misc_feature complement(71099..71164) FT /colour=11 FT /locus_tag="Nwi_0059" FT /note="1 probable transmembrane helix predicted FT byTMHMM2.0" FT CDS complement(71498..72238) FT /locus_tag="Nwi_0060" FT /product="Protein of unknown function DUF540" FT /note="PFAM: Protein of unknown function DUF540: (1e-20)" FT /note="SPTR top hit: 'Q89WJ5 Bll0692 protein. FT Bradyrhizobium japonicum., evalue=1e-103, 76% identity FT hit'" FT /note="KEGG top hit: 'bja:bll0692 category=Unassigned, FT evalue=1e-104, 76.016260% identity hit'" FT /note="COGs: 'evalue=2e-28 score=119 category=E FT group=COG2981 Uncharacterized protein involved in cysteine FT biosynthesis'" FT /note="InterPro IPR007496" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=10 FT /translation="MIGAAVNALTQILSLPMRAILWRVIGLALVLIVVAAVGLQRLLSWLAGSGEVWAETMLGPSFHTPLNILAWILSIAAGLG FT IVFGAVFLMPAITSLVAGVFVDDVAEIVEHEHYPADRPGAALPIGLAMTESIKAALLTLLVYLIALPFVFVAGAGVIAFF FT IATAWLLGREYFELAAMRFRSPAEAKAMRRDNASTIFMAGLIIAAFVAIPVVNLATPLFGMAFMVHLHKRLSGPRPELIA FT PDRRSR*" FT gene complement(71498..72238) FT /locus_tag="Nwi_0060" FT /colour=10 FT misc_feature complement(join(71594..71659,71756..71821,71975..72040,72122..72178)) FT /colour=11 FT /locus_tag="Nwi_0060" FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(72425..72910) FT /locus_tag="Nwi_0061" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q5LL54 Hypothetical protein. FT Silicibacter pomeroyi., evalue=2e-41, 54% identity hit'" FT /note="KEGG top hit: 'sil:SPOA0173 category=Unassigned, FT evalue=1e-41, 54.000000% identity hit'" FT /note="COGs: 'evalue=9e-11 score=59.9 category=O FT group=COG1225 Peroxiredoxin'" FT /note="InterPro IPR011594" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MTADAPAPELAVSQWFNTAEPITLAALRGRPVLLHAFQMLCPGCVAHGTPQTQRAHELFKATDLQVIGLHTVFEHHAAMT FT PVSLQAFIHEYRLTFPIGVDAAGDGTPLPVTMGRYGMQGTPTSILIGRNGRIVHQGFGQQSDMALGAMIAAELAGAQTYA FT A*" FT gene complement(72425..72910) FT /locus_tag="Nwi_0061" FT /colour=13 FT CDS complement(73016..74020) FT /locus_tag="Nwi_0062" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q89WI5 Bll0702 protein. FT Bradyrhizobium japonicum., evalue=1e-129, 71% identity FT hit'" FT /note="KEGG top hit: 'bja:bll0702 category=Unassigned, FT evalue=1e-129, 71.207430% identity hit'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MGLVLDTVGKWIAAYLQKEIPGYRPFAPSDPEHLRDLIEEGDVLLVEGNSRISGIIKYLTQSTWSHSALYVGPIDGASEA FT DGEPHVLIEANVGEGVVSAPLSKYFPYHSRVCRPVGLSHEDRVTVCRYAINRIGFGYDTKNIIDLMRYLVPLPFPQRWRR FT RMIAFGSGDPTKMICSALIAQAFGAVRYPVLPKITRAGSRSARREILHIRDSSLYMPRDFDISPYFEIVKPTIARGFDYR FT SLHWADTPKPLAESVHGEDPFQAGAGAPSFDPAPHDSPVTVEEVSAEESVPPRAQSETGDTAHIRGARARSPRRASGARP FT THTGATFHHERSPR*" FT gene complement(73016..74020) FT /locus_tag="Nwi_0062" FT /colour=13 FT CDS 74260..75702 FT /locus_tag="Nwi_0063" FT /product="Amine oxidase" FT /note="TIGRFAM: Twin-arginine translocation pathway FT signal: (0.0073)" FT /note="PFAM: Amine oxidase: (2.8e-34) FAD dependent FT oxidoreductase: (0.0009)" FT /note="SPTR top hit: 'Q89WI4 Blr0703 protein. FT Bradyrhizobium japonicum., evalue=1e-172, 65% identity FT hit'" FT /note="KEGG top hit: 'bja:blr0703 category=Unassigned, FT evalue=1e-172, 65.948276% identity hit'" FT /note="COGs: 'evalue=1e-24 score=107 category=E FT group=COG1231 Monoamine oxidase'" FT /note="InterPro IPR002937:IPR003042:IPR006076:IPR006311" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=10 FT /translation="MRITRRDFLSASAGCAAGMSIGRARAAPLPRDPDVIVIGAGAAGIAAARRVQAANRTVLVLEAAGRIGGRCHTDTTTFGT FT PFDRGARWLFEPDTNPIIRLARSAGMEVFPSPLGQKIRIGRRNARAGETEQFLAALMRAKRAIGEAARRKVDVACASMLP FT EDLDVWAETIDFVLGASATGKDLKDLSVMDRASAPERNVAIDCRQGLGVLLATLGQAVPVSLSTPVTRVTWTGRSLTVET FT SAGRIDTRAVIVTVSVNVLTSGHIRFTPELPKRQLDAAARLSLGSYDRIALWLPDNPLGLGPGETMIEQSSDGKTALLVA FT NAHGSSLCTVDIAGGFGRDLSAQGTSAMTAFATEWLTKLFGSDAADAVKQSATTRWNADPHVLGAMSAAEPGGHPSRKIL FT MEPLGNLFLAGEAAHETLWGTVNGAWESGERAADAALRKIGASREKEPAQPQASKHKQPRAQRRTPSRRGNDAFGFPLPR FT *" FT sig_peptide 74260..74340 FT /colour=11 FT /locus_tag="Nwi_0063" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.998 atresidue 27" FT gene 74260..75702 FT /locus_tag="Nwi_0063" FT /colour=10 FT CDS 75699..76367 FT /locus_tag="Nwi_0064" FT /product="Protein of unknown function DUF71, ATP-binding FT region" FT /note="PFAM: Protein of unknown function DUF71, FT ATP-binding region: (2.6e-10)" FT /note="SPTR top hit: 'Q82UC8 Hypothetical protein. FT Nitrosomonas europaea., evalue=2e-58, 48% identity hit'" FT /note="KEGG top hit: 'neu:NE1564 category=Unassigned, FT evalue=9e-59, 48.181818% identity hit'" FT /note="COGs: 'evalue=6e-34 score=137 category=R FT group=COG2102 ATPases of PP-loop superfamily'" FT /note="InterPro IPR002761" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MTRPKALISWSSGKDSAFALHEIRREGAFDVVGALTTVNERFGRVSIHGVRQELLDAQLTAAGLSPRVVPIPDPCPNDAY FT EARMTRTMADAKRSGITHIIFGDLFLADIRAYREQKLAGAGITPVFPLWGRPTSTLAREMIASGLEARLVSVDLAKLDRS FT LAGRDFDERLLEDLPAGIDPCGENGEFHTFVSAAPVFSQRLEVLCGDVVERGGFAYRDLVPA* FT " FT gene 75699..76367 FT /locus_tag="Nwi_0064" FT /colour=11 FT CDS complement(76495..78933) FT /locus_tag="Nwi_0065" FT /EC_number="6.1.1.20" FT /product="phenylalanyl-tRNA synthetase, beta FT subunit" FT /note="TIGRFAM: Bacterial phenylalanyl-tRNA synthetase, FT beta subunit: (8.5e-225)" FT /note="PFAM: t-RNA-binding region: (2e-26) Ferredoxin-fold FT anticodon-binding: (9.6e-27) B3/4: (2.6e-92) tRNA FT synthetase, B5: (9.7e-17)" FT /note="SPTR top hit: 'Q89WI2 Phenylalanyl-tRNA synthetase FT beta chain (EC 6.1.1.20) (Phenylalanine-- tRNA ligase beta FT chain) (PheRS). Bradyrhizobium japonicum., evalue=0.0, 78% FT identity hit'" FT /note="KEGG top hit: 'bja:bll0705 pheT EC=6.1.1.20 FT category=Metabolism; Amino Acid Metabolism; Phenylalanine, FT tyrosine and tryptophan biosynthesis [PATH:bja00400] FT Genetic Information Processing; Translation; FT Aminoacyl-tRNA biosynthesis [PATH:bja00970] , evalue=0.0, FT 78.791615% identity hit'" FT /note="COGs: 'evalue=1.0e-163 score=571 category=J FT group=COG0072 Phenylalanyl-tRNA synthetase beta subunit'" FT /note="InterPro FT IPR002547:IPR004532:IPR005121:IPR005146:IPR005147" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=7 FT /translation="VKFTLSWLKDHLDTDEPLEKLADKLTMIGLEVEHIADKSKTFAPFTIARVVSAVQHPNADRLRVCMVDTGETSDKGDPSY FT IQVVCGAPNAREGLISVFAPPGTHIPGKNITLGVGTIRGVESRGMLCSAAELEISDDHDGIIELPADAPVGAGYAEWAGL FT GDPVIEINLTPNRQDCTGVHGIARDLSAADMGRFKDPTIKPVTGEFPCPVKVTVEDASLCPGFALRMVRGVKNGPSPEWL FT QKRLTSIGLRPINALVDITNFMTYDRARPLHVFDAKKVHGDLTIRRARDGETLKALDGRIYTLDPNVCVIADDKGVESLA FT GIMGGEETGCDETTTDVLIESALWSEINIAQTGRRLGINSDARYRFERGVDPAFMVPGLEMATRLVMELCGGSPSENVVA FT GQALPEDRVIDFPLSEIKRLAAIDVPLVEVRRILGHLGFMVAGSGPVVKVAIPTWRTDVQGKADLVEEIVRIVGVDKVPM FT TPFDRGEAPRKPVLTSIQSRTRKARRALAARGMVEAVNWSFISRTQAELFGGGSSELALANPIASDLSDMRPSLLPGLVA FT IAQANADRGFADVALFEVGQIFRGDGPQDQFMAAAGLRRGIASSAGLGRHWSGSATANALDAKADAFAVLAAAGAPAAAL FT QIATSHESKNFPAWLHPGRSAAIQIGPHNVLGYFGELHPRVLDELKAEGPLLGFEVILDRIPEAKQKPTRAKPVLELPAF FT QPVSRDFAFIVDRTVKAADIVRAAQNVDRKLVSGVTVFDIYEGKGIDADKKSVAIAVRLQPRDRTFTDQEIEAVAGKIVA FT EVAKRTGGSLRG*" FT gene complement(76495..78933) FT /locus_tag="Nwi_0065" FT /colour=7 FT CDS complement(78930..80039) FT /locus_tag="Nwi_0066" FT /EC_number="6.1.1.20" FT /product="phenylalanyl-tRNA synthetase, alpha subunit" FT /note="TIGRFAM: Phenylalanyl-tRNA synthetase, alpha FT subunit: (2.6e-106)" FT /note="PFAM: Phenylalanyl-tRNA synthetase, class IIc: FT (9.3e-154) Aminoacyl tRNA synthetase, class II, FT N-terminal: (2.4e-31)" FT /note="SPTR top hit: 'Q89WI1 Phenylalanyl-tRNA synthetase FT alpha chain (EC 6.1.1.20) (Phenylalanine--tRNA ligase FT alpha chain) (PheRS). Bradyrhizobium japonicum., FT evalue=0.0, 86% identity hit'" FT /note="KEGG top hit: 'bja:bll0706 pheS EC=6.1.1.20 FT category=Metabolism; Amino Acid Metabolism; Phenylalanine, FT tyrosine and tryptophan biosynthesis [PATH:bja00400] FT Genetic Information Processing; Translation; FT Aminoacyl-tRNA biosynthesis [PATH:bja00970] , evalue=0.0, FT 86.666667% identity hit'" FT /note="COGs: 'evalue=1.0e-122 score=433 category=J FT group=COG0016 Phenylalanyl-tRNA synthetase alpha subunit' FT " FT /note="InterPro IPR002319:IPR004188:IPR004529:IPR006195" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=7 FT /translation="MTLCKWWRFMSDLDALQSNILADIANASDEAALEAVRVMALGKKGSISALLATLGKMSPDERKTEGAKINLAKDTVTRAL FT AARREVLKALALDARLASETIDVTPPLRETPAEAGRIHPLSQVWDEVTTIFADMGFAVAEGPDIETDDYNFTRLNFPEGH FT PAREMHDTFYFNPKDDGSRLLLRTHTSPVQVRTMLSQKPPIRVICPGRTYRSDSDQTHTPMFHQVEGLVIDKSSHLGHLK FT WILHEFCKAFFEVDNVNMRFRPSFFPFTEPSLEVDIQCRRDKHEIRFGEGEDWLEILGCGMVHPNVLKLCGIDPEVYQGF FT AWGMGIDRITMLKYGIADLRQLFEGDVRWLTHYGFRPLEIPTLAGGLSS*" FT gene complement(78930..80039) FT /locus_tag="Nwi_0066" FT /colour=7 FT CDS complement(80156..80515) FT /locus_tag="Nwi_0067" FT /product="Ribosomal protein L20" FT /note="TIGRFAM: Ribosomal protein L20, bacterial and FT organelle form: (3.2e-58)" FT /note="PFAM: Ribosomal protein L20: (3.3e-42)" FT /note="SPTR top hit: 'Q6NDR6 50S ribosomal protein L20. FT Rhodopseudomonas palustris., evalue=1e-55, 92% identity FT hit'" FT /note="KEGG top hit: 'rpa:RPA0038 rplT category=Genetic FT Information Processing; Translation; Ribosome FT [PATH:rpa03010] , evalue=7e-56, 92.436975% identity hit'" FT /note="COGs: 'evalue=3e-35 score=140 category=J FT group=COG0292 Ribosomal protein L20'" FT /note="InterPro IPR005812:IPR005813" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=7 FT /translation="MARVKRGVTAHAKHKKVYKVTKGFSGRRKNTIRAAKAAADKAGQYAFRDRKRKKRTFRALWIQRLNAAVRPFGMTYSRFI FT DGLSKSGITVDRKVLSDLAINEPAAFQAIAEKAKAALAA*" FT gene complement(80156..80515) FT /locus_tag="Nwi_0067" FT /colour=7 FT CDS complement(80581..80781) FT /locus_tag="Nwi_0068" FT /product="Ribosomal protein L35" FT /note="TIGRFAM: Ribosomal protein L35: (4e-26)" FT /note="PFAM: Ribosomal protein L35: (2e-13)" FT /note="SPTR top hit: 'Q89WH9 50S ribosomal protein L35. FT Bradyrhizobium japonicum., evalue=2e-30, 95% identity FT hit'" FT /note="KEGG top hit: 'bja:bsl0708 rpmI category=Genetic FT Information Processing; Translation; Ribosome FT [PATH:bja03010] , evalue=1e-30, 95.454545% identity hit'" FT /note="COGs: 'evalue=3e-08 score=50.2 category=J FT group=COG0291 Ribosomal protein L35'" FT /note="InterPro IPR001706" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=7 FT /translation="MPKLKTKSGAKKRFKITATGKVKHAQRGKRHGMIKRTKKQIRQLRGTRVLFKTDGDNIKKYFLPNA*" FT gene complement(80581..80781) FT /locus_tag="Nwi_0068" FT /colour=7 FT CDS complement(81110..81625) FT /locus_tag="Nwi_0069" FT /product="initiation factor 3" FT /note="TIGRFAM: Initiation factor 3: (3.3e-58)" FT /note="PFAM: Initiation factor 3: (3.7e-46) Initiation FT factor 3: (1.6e-41)" FT /note="SPTR top hit: 'Q6NDR4 Translation initiation factor FT IF-3. Rhodopseudomonas palustris., evalue=6e-81, 88% FT identity hit'" FT /note="KEGG top hit: 'rpa:RPA0040 infC FT category=Unassigned, evalue=4e-81, 88.235294% identity FT hit'" FT /note="COGs: 'evalue=3e-57 score=214 category=J FT group=COG0290 Translation initiation factor 3 (IF-3)'" FT /note="InterPro IPR001288" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=7 FT /translation="MPVAKDGPRTNDEIRNAQVQLIDQEGTNQGTVETIAAIKMAMEAGMDLVEIAPNSSPPVCKIMDYGKYKFQAQKKAAEAR FT KRQKIVEIKEIKLRPMIDDHDYNVKMKAMQRFFEEGDKVKITLRYRGREMAHQEIGTKLLDKVKADVSAYAKVEQDARFE FT GRQVVMVLAPR*" FT gene complement(81110..81625) FT /locus_tag="Nwi_0069" FT /colour=7 FT CDS 81853..82626 FT /locus_tag="Nwi_0070" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q89WH6 Blr0711 protein. FT Bradyrhizobium japonicum., evalue=1e-107, 71% identity FT hit'" FT /note="KEGG top hit: 'bja:blr0711 category=Unassigned, FT evalue=1e-107, 71.641791% identity hit'" FT /note="COGs: 'evalue=4e-08 score=52.0 category=R FT group=COG0596 hydrolases or acyltransferases (alpha/beta FT hydrolase superfamily)'" FT /note="InterPro IPR000379" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MTDGTATQFIEVGGGDAARRIAVRARRGGAAGLFWLGGFRSDMAGTKALALDAWAAEHGRACVRFDYSGHGESGGEFTEG FT TISRWLEESLAVFDAFCEGPQVVIGSSMGGWIALLLARAVARRASSRATLSGLVLIAPAPDFTEELMWKAFPPEARHALE FT THGVWLRPSDYGDPYPITRKLIEDGRNHLLLGKSISTGCPVRILQGAQDTDVPWRHAFALTERLPSDDVVLTMIRDGDHR FT LSRPQDIARILAAVREF*" FT gene 81853..82626 FT /locus_tag="Nwi_0070" FT /colour=13 FT CDS complement(82679..85012) FT /locus_tag="Nwi_0071" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q89US4 Bll1337 protein. FT Bradyrhizobium japonicum., evalue=1e-77, 31% identity FT hit'" FT /note="KEGG top hit: 'bja:bll1337 category=Unassigned, FT evalue=8e-78, 31.523179% identity hit'" FT /note="COGs: 'evalue=4e-25 score=110 category=S FT group=COG3673 Uncharacterized conserved protein'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MPMRTTPQRASFVLEQECRDQHRANIVPGAGMGRKIVLLSDGTGNSAAKVWRTNVWRTFEALDVSGSDQVAFYDDGVGTS FT SFKPLAMLGGAFGFGLKRNVIDIYKFACRNWRDDSDEIFGFGFSRGAFTIRVVMGLILNQGLIVAATEKELDRKARAAYR FT AYRRERYHTVWRVEHLFRSLRDLVRRDDYDKADNRVIQRIRFIGVWDTVAAYGLPIDEMTRGISRFIWPLQFPDHRLDLT FT RVVRACQALSIDEERTTFHPELWDECGARSASPRRDGERYLADEQVSQVWFPGVHSNVGGGYPDDSLAYIPLVWMLREAE FT ACGLRFKSDQGTPPADPDTFKHAIVNCDKDGRLYDPRKGVGGYYRYGPRKIELLSNYIYAKRDVVSVARPKVHESALCRI FT ASRVHAYAPVGLPAVYDVATYDGRIVTPDAFGLETSGEAATRAEAQEHVWNEVWKRRIVYFLTVGVSLWLALYPLLRKLP FT AKDEYLSPFRWISDIIRLVGGFLPGFAQTWIDGYARSPVQFSLLFAAVIVLIAWSGRLAAGISDTMGAIWRRAPSAPVTR FT PTNWIYRLRTSRIYTAFHDWLKRRGAPAFFALLFVYLGVTLTSHLLYNVQDIAGFTCRESPDTKRLARGEEASATFATSG FT LCNNTGIFVEGNGARYLVKVETTEPFRDGGIASPLGGFYSTDAPDWHQQLALVLGVPLRRELTRPWFRLVLRYGAVGGEE FT VFLDPDPEDGTIEAVIRPTRSGELLVFVNDAVLGVPGFYDTFYRNNEGAAKLIVKRR* FT " FT gene complement(82679..85012) FT /locus_tag="Nwi_0071" FT /colour=13 FT misc_feature complement(join(83192..83257,83384..83449,83480..83545,83585..83638)) FT /colour=11 FT /locus_tag="Nwi_0071" FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(85217..86920) FT /locus_tag="Nwi_0072" FT /product="PAS sensor protein" FT /note="TIGRFAM: PAS: (5.4e-05)" FT /note="PFAM: PAS: (0.05)" FT /note="SMART: PAS: (0.043) PAC motif: (0.00094)" FT /note="SPTR top hit: 'Q4ZUB5 PAS. Pseudomonas syringae pv. FT syringae B728a., evalue=1e-130, 43% identity hit'" FT /note="KEGG top hit: 'psb:Psyr_2214 category=Unassigned, FT evalue=1e-131, 43.738318% identity hit'" FT /note="COGs: 'evalue=9e-13 score=68.8 category=T FT group=COG2202 FOG: PAS/PAC domain'" FT /note="InterPro IPR000014:IPR000700:IPR001610" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=15 FT /translation="MFFFKKWSIAKEDAAKTAAIRKSQAVIELGLDGTVVTANENYLSIFGYTLADVRGQHHSMFVEADERSGAAYRDFWARLN FT KGETQSAEFKRIDRHGDEVWVQASYIPVLDSRGNPKKIIALAADITAKKIKELENAGQVSAIERAQAVVEFNLDGTIITA FT NKNFLNVMGYTLGEMQGKHDRVFVESSERAGDAYRDFWARLNLGEPQSAEYKRINKAGNEVWLLATFNPIVDESGKPFKV FT VAFATDVTKQKVKSADLEGQITAIGKSQAVVELGMDGKILTANDNFLKTFGYALLKDIQGKHHNMFVEAAERTSTAYRDF FT WARLARGEAQSAEYKRIGKDGKTVWLQASYNPVLDSRGKPVKVVEIATDITARKLKALENEGQLAAIERAQAIASFRPDG FT TIIAANDKYLKAMGYTLGEVSGKHDGMFVESSERSGSAYREFWGKLNRGEAQSAEFKRVAKDGSEVRIRASYIPVLDAQG FT KTTKVVQYAMVIESAAAASEEMSAPIQEAPVSMAKQADEQSLSMSRLESRRKSVNAGPSPLAQFLTNLREGFSSAVASST FT RAVANFL*" FT gene complement(85217..86920) FT /locus_tag="Nwi_0072" FT /colour=15 FT tRNA complement(87473..87547) FT /locus_tag="Nwi_R0001" FT /gene="tRNA-Gly2" FT /note="anticodon GCC, Cove Score=86.85" FT /product="tRNA_Gly" FT /colour=8 FT CDS 87836..88846 FT /locus_tag="Nwi_0073" FT /product="thioredoxin-related" FT /note="PFAM: Thioredoxin-related: (1.2e-13)" FT /note="SPTR top hit: 'Q89WT4 Thioredoxin. Bradyrhizobium FT japonicum., evalue=1e-115, 69% identity hit'" FT /note="KEGG top hit: 'rpa:RPA0267 trx FT category=Unassigned, evalue=1e-115, 70.512821% identity FT hit'" FT /note="COGs: 'evalue=2e-68 score=252 category=O FT group=COG3118 Thioredoxin domain-containing protein'" FT /note="InterPro IPR006662:IPR006663" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="VLAKHRRTSDNGTRPLIPGTSGEDHVTIVEHDGGPPPQAPDLINETTTQTFMKDVVEESMHQPVLVDFWAPRSGPSRQLS FT PLLEKAVRAAAGKVKLAKMNIDQHPAIFQQLAAQIGSHSIPAVFAFVGGRPVDYFTGAVPESQVKDFIDKLTQGAGAAPG FT APNIEEILQEADAALAAGDPATAAAVYAEALGIDAANLRAIAGLARCYASTGAIDKAKQTLALVPESKRGDAAVTTVQAM FT IDLAEQASSLGPIAELEQKVAADPLDHQARFDLATALNAGGKRSEATDHLLEIVKRDRKWNDDAARKQLVQFFEAWGATD FT EATVEGRKRLSTILFS*" FT gene 87836..88846 FT /locus_tag="Nwi_0073" FT /colour=9 FT CDS 88990..89664 FT /locus_tag="Nwi_0074" FT /EC_number="3.4.21.53" FT /product="peptidase S16" FT /note="PFAM: Peptidase S16, lon N-terminal: (4.7e-09)" FT /note="SMART: Peptidase S16, lon N-terminal: (1.2e-16)" FT /note="SPTR top hit: 'Q6ND41 Putative Lon family FT ATP-dependent protease. Rhodopseudomonas palustris., FT evalue=1e-107, 85% identity hit'" FT /note="KEGG top hit: 'rpa:RPA0268 category=Unassigned, FT evalue=1e-107, 85.777778% identity hit'" FT /note="COGs: 'evalue=2e-49 score=188 category=R FT group=COG2802 Uncharacterized protein similar to the FT N-terminal domain of Lon protease'" FT /note="InterPro IPR003111" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MPINADYRGPADLPEVIPVFPLPGALLLPRGQMPLNIFEMRYLAMVDDALRDGHRLIGMIQPDLTHSASEDKPELFHVGC FT AGRITQFAESGDGRYILELTGVSRFKVVEELTVLTPYRQCKVDFFAYADDLTARKGEDEVDRKRLLEVLTDFLKVNNLKV FT DWNGIENAPNEALVNALAMMSPYGPPEKQAMLEAADLKTRAEILIAVTEMDLAKKRTSGDPGLQ* FT " FT gene 88990..89664 FT /locus_tag="Nwi_0074" FT /colour=11 FT CDS 89704..89904 FT /locus_tag="Nwi_0075" FT /product="Protein of unknown function DUF343" FT /note="PFAM: Protein of unknown function DUF343: FT (6.1e-25)" FT /note="SPTR top hit: 'Q89WS6 Bsr0601 protein. FT Bradyrhizobium japonicum., evalue=2e-22, 81% identity FT hit'" FT /note="KEGG top hit: 'bja:bsr0602 category=Unassigned, FT evalue=8e-23, 81.967213% identity hit'" FT /note="COGs: 'evalue=7e-15 score=72.2 category=S FT group=COG2835 Uncharacterized conserved protein'" FT /note="InterPro IPR005651" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MTPPHSDRPEDTADPKLLEILVCPVTKGPLELDGARRELISRSAKLAYPIRDGIPIMLPEEARKIE*" FT gene 89704..89904 FT /locus_tag="Nwi_0075" FT /colour=13 FT CDS complement(89965..90303) FT /locus_tag="Nwi_0076" FT /product="Nitrogen regulatory protein P-II" FT /note="PFAM: Nitrogen regulatory protein P-II: (2.2e-67)" FT /note="SPTR top hit: 'Q89WS2 Nitrogen regulatory protein FT PII. Bradyrhizobium japonicum., evalue=1e-51, 90% identity FT hit'" FT /note="KEGG top hit: 'bja:blr0606 glnK FT category=Unassigned, evalue=5e-52, 90.178571% identity FT hit'" FT /note="COGs: 'evalue=7e-40 score=155 category=E FT group=COG0347 Nitrogen regulatory protein PII'" FT /note="InterPro IPR002187:IPR002332" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=10 FT /translation="MKLVVAIIKPFKLDEVREALTALGVHGMTVTEVKGYGRQKGHTEIYRGAEYVVNFLPKLRIEVAVASELADKAVEAIAAA FT ARTGQIGDGKLFVLPIDHALRIRTGETDSDAL*" FT gene complement(89965..90303) FT /locus_tag="Nwi_0076" FT /colour=10 FT CDS 90530..91414 FT /locus_tag="Nwi_0077" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q89WS3 Bll0605 protein. FT Bradyrhizobium japonicum., evalue=3e-75, 48% identity FT hit'" FT /note="KEGG top hit: 'bja:bll0605 category=Unassigned, FT evalue=2e-75, 48.611111% identity hit'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MPNRQWFFASGNTQQGPYSQDQLRDFIARGAVRADTRVWTEGMSDWQRAGDIPGLLSGGSAAPAMPPASARESEPLARGT FT EPIGAPLSVDLNIWGLLGRTLIFVIGFLLVLPAPWVATSFYGWLISRVRVPQRPNLSFTGQPTDIWWVFVLLALCAYSGL FT TDIPYIGIILIPVQAWLSWMTIKWVVANISANGQPLRLSFRGEALHYIGWFVLLNLSFITIIGWAWVTTAMTRWMFRNID FT GTRREIIFNASGLEVLWRTVVVAIGCILIIPIPWVLGWIARWYVSQVALAPRTA*" FT gene 90530..91414 FT /locus_tag="Nwi_0077" FT /colour=13 FT misc_feature join(90836..90904,90965..91033,91142..91210,91307..91375) FT /colour=11 FT /locus_tag="Nwi_0077" FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(91510..92412) FT /locus_tag="Nwi_0078" FT /EC_number="3.1.2.2" FT /product="acyl-CoA thioesterase" FT /note="TIGRFAM: Acyl-CoA thioesterase: (1.9e-94)" FT /note="PFAM: Acyl-CoA thioesterase: (4.7e-43)" FT /note="SPTR top hit: 'Q89WS4 Acyl-CoA thioesterase II. FT Bradyrhizobium japonicum., evalue=1e-145, 86% identity FT hit'" FT /note="KEGG top hit: 'bja:blr0604 tesB EC=3.1.2.- FT category=Metabolism; Biodegradation of Xenobiotics; FT Benzoate degradation via CoA ligation [PATH:bja00632] FT Metabolism; Biosynthesis of Secondary Metabolites; FT Limonene and pinene degradation [PATH:bja00903] , FT evalue=1e-145, 86.315789% identity hit'" FT /note="COGs: 'evalue=1.0e-101 score=363 category=I FT group=COG1946 Acyl-CoA thioesterase'" FT /note="InterPro IPR003703" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=5 FT /translation="MSESLTDLISILDLEPIEENLFRGGSPKTGWQRVFGGQVIGQAMAAACRTVEGRLPHSLHCYFILPGDPAVPIIYQVERL FT RDGRSYSTRRVTAIQHGRAIFSIMVSFHVDEEGAFNHQEKMPDVPPPEQLSPEEFAKQPTFKEMPEFIRRYYESDRPIEL FT RPVELNRYFGERIEDGRVHVWIRTASNLPDDPALHMCALAYASDFALLDAVMARYGRTLFDKHMLAASLDHAMWFHRPFR FT ADEWLLYAQDSPSAQSGRGLARGLIFRQDGTLIASVAQEGSVRERSSSIFASDGIRSEAS* FT " FT gene complement(91510..92412) FT /locus_tag="Nwi_0078" FT /colour=5 FT CDS 92582..93802 FT /locus_tag="Nwi_0079" FT /product="ubiquinone biosynthesis hydroxylase, FT UbiH/UbiF/VisC/COQ6" FT /note="TIGRFAM: Ubiquinone biosynthesis hydroxylase, FT UbiH/UbiF/VisC/COQ6: (1.5e-150)" FT /note="PFAM: Monooxygenase, FAD-binding: (5.9e-11)" FT /note="SPTR top hit: 'Q89WS5 Bll0603 protein. FT Bradyrhizobium japonicum., evalue=0.0, 83% identity hit'" FT /note="KEGG top hit: 'bja:bll0603 EC=1.14.13.- FT category=Metabolism; Metabolism of Cofactors and Vitamins; FT Ubiquinone biosynthesis [PATH:bja00130] , evalue=0.0, FT 83.743842% identity hit'" FT /note="COGs: 'evalue=2e-66 score=246 category=C FT group=COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and FT related FAD-dependent oxidoreductases'" FT /note="InterPro IPR002938:IPR003042:IPR010971" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=3 FT /translation="MTTRQSIVICGGAFAGLALALALRQGLGNEIPIVVADPMLANRPSRDPRATAIVAACRRLFEALGVWDEVAATAQPMLDM FT VVTDSKLEDATRPVFLTFAGDVQPGEPFAHMVENRYLIEALASRAETAGVDLRATAVTGNDAKPGGVTVSLADGSTIEAS FT LLVAADGARSKLRERAGIATHGWEYDQSGIVVTVGHERDHQGRAEEHFLPAGPFAILPLTGRRSSLVWTEKRADAARIVA FT LAEEEFHAELEQRFGLHLGEVRALDKPRAFPLQYFVARSFIAERLALVGDAAHVIHPIAGQGLNLGLKDVAALAEVVVDA FT VRLGIDPGQADVLERYQRWRRFDTMAMGLATNTLNVLFSNESTLLRGVRDIGLGLVDRMPPLKNAFIRQAAGLTGEVPRL FT LKGEVL*" FT sig_peptide 92582..92644 FT /colour=11 FT /locus_tag="Nwi_0079" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.988) with cleavage site probability FT 0.769 atresidue 21" FT gene 92582..93802 FT /locus_tag="Nwi_0079" FT /colour=3 FT misc_feature 92600..92653 FT /colour=11 FT /locus_tag="Nwi_0079" FT /note="1 probable transmembrane helix predicted FT byTMHMM2.0" FT CDS complement(94175..94603) FT /locus_tag="Nwi_0080" FT /product="hypothetical protein" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=0 FT /translation="MSKFRDMLLEEREALLKVYRPLETDIKAMRFEMYEKQQRLAELASDIEKINLALKAVEDADKRPQITIMEAVVEVLKDRP FT EGLTALEILAEINTRYFGDRIIRSSLSPQLSRLKDRDHKIGLRGKKWFLLPQQPSLFVERRD* FT " FT gene complement(94175..94603) FT /locus_tag="Nwi_0080" FT /colour=0 FT CDS complement(96113..97084) FT /locus_tag="Nwi_0081" FT /product="ISSpo8, transposase" FT /note="SPTR top hit: 'Q5LW63 ISSpo8, transposase. FT Silicibacter pomeroyi., evalue=3e-41, 35% identity hit'" FT /note="KEGG top hit: 'sil:SPO0479 category=Unassigned, FT evalue=2e-41, 35.714286% identity hit'" FT /note="COGs: 'evalue=0.006 score=35.4 category=L FT group=COG3677 Transposase and inactivated derivatives'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MTDLLKNPIFQDETKARDWLEARVWANGRVCPHCGNADQEKITKLEGKAHRPGVYQCNEPACREQFTVTVGTVFERSKIP FT LTKWLAALFLMTASKKGVSAHQVHRMLGISYKSTWFLMHRLREAMRTGGLEPLGGEGKIVEADETYFGKADTQRVSPQRK FT GRTFTKNRKIKNDRPIVSLVERGGNVRSFHVAVADSSTVACIVNANVHKESRLQTDESRLYTKVGADFAAHETVNHGAKE FT YARGDVTTNTIESYFSVFKRGMRGTYQHCSEKHLHRYLAEFDFRYNNRIALGVNDTDRANELAKGIVGKRLTYRRPNSKD FT VQT*" FT gene complement(96113..97084) FT /locus_tag="Nwi_0081" FT /colour=11 FT CDS 97354..98625 FT /locus_tag="Nwi_0082" FT /EC_number="2.6.1.1" FT /product="aminotransferase, class I and II" FT /note="PFAM: Aminotransferase, class I and II: (5.4e-34)" FT /note="SPTR top hit: 'Q6ND31 Putative FT N-succinyldiaminopimelate aminotransferase (EC 2.6.1.17). FT Rhodopseudomonas palustris., evalue=1e-173, 75% identity FT hit'" FT /note="KEGG top hit: 'rpa:RPA0278 EC=2.6.1.17 FT category=Metabolism; Amino Acid Metabolism; Lysine FT biosynthesis [PATH:rpa00300] , evalue=1e-173, 75.314861% FT identity hit'" FT /note="COGs: 'evalue=3e-63 score=235 category=E FT group=COG0436 Aspartate/tyrosine/aromatic FT aminotransferase'" FT /note="InterPro IPR001176:IPR004838:IPR004839" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=10 FT /translation="MATPASSRAAQGDASPTQLDAGAFLSAAGPAALTAASERSPFARTAELLAPYQPEQSLINLSLGEPQDPPPDFVGPILSR FT HIDEFRRYPMARGIEPFRRAAAEWLSRRFALPRAIDPDAEILALNGSREGLFYAAIAAARYVAPRKGAPAILMPNPFYPA FT YGAGARAANCEAIFLPATRANGFLPDLDSLDDATLARTVAIYLASPANPQGAVASRDYLSRLIALARRHGFLVFSDECYS FT EIYTQSPPGSALECAGPDFAHVVAFQSLSKRSNLPGLRVGFVAGDRNFLTAFHELRNVAAPQVPAPLQHVGAAAYGDEAH FT VEENRRLYRLKFDLADGIIGTRFGYARPAGGFCLWLDVSAYGGDEAATIRLYREAGLRVVPGSYLARPQGDGGNPGAGYI FT RLALVADIETTAEALRRLVKTLG*" FT gene 97354..98625 FT /locus_tag="Nwi_0082" FT /colour=10 FT CDS 98638..101139 FT /locus_tag="Nwi_0083" FT /product="cell division protein FtsK/SpoIIIE" FT /note="PFAM: Cell divisionFtsK/SpoIIIE: (4.6e-73)" FT /note="SMART: ATPase (3.2e-06)" FT /note="SPTR top hit: 'Q89WR2 DNA translocase ftsK. FT Bradyrhizobium japonicum., evalue=0.0, 81% identity hit'" FT /note="KEGG top hit: 'bja:blr0616 ftsK FT category=Unassigned, evalue=0.0, 81.100478% identity hit'" FT /note="COGs: 'evalue=1.0e-143 score=503 category=D FT group=COG1674 DNA segregation ATPase FtsK/SpoIIIE and FT related proteins'" FT /note="InterPro IPR002543:IPR003593" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MSMAAIERLLPIVDQIPPSIREPLARRLRELTGLGLIGLSGAAAAALMTWSVQDPSLSHATSRPIHNVLGYPGAIGADLL FT MQLLGLGAIMLILPVAIWGWRMLTHRPFDREASRLACWILCTTSAAGFASCWPHNGAWPLPTGLGGVVGDALVRAPAILF FT GPAGVLQSILLGAIMLLVMAATFLWASGIRSRPAEELPEIEDDAPFDEGDDHASVSLGWAVHALMSAKARLKRLKIGALL FT ALAYKSLVSSAPRNSGALAFERQEPVLGGGPVAPSLAPGRAGHDDDIDDEPDDDPEDEAEDEEDNDAPPVVAAPRRKAAP FT RQPAKKAGKFELPSVNVLSAPRASDRQPLSKSELEANSRALEGVLGDFGVRGEIVKANPGPVVTLYELEPAPGIKSARVI FT GLADDIARSMSALSARVAVVPGRNAIGIELPNAHREKVYLRELLTAREATESVAKLPLCLGKTIGGDPVIIDLARTPHML FT IAGTTGSGKSVAINTMILSLLYRLRPDQCRLIMVDPKMLELSVYDGIPHLLTPVVTDPKKAVVALKWAVREMEERYKKMA FT KLGVRNIDGYNTRLVDAKAKGEELTRTVHTGFDKETGKAIYEEEKLEFEPLPFIVIIVDEMADLMMVAGKDIEGAVQRLA FT QMARAAGLHVILATQRPSVDVITGTIKANFPTRIAFQVTSKIDSRTILGEMGAEQLLGQGDMLYMAGGGRISRVHGPFAS FT DEEVEKVVRHLKTQGAPEYLEAVTAEEPAEGEDGAVFDGTSMGSDGGGDLFAQAVAIVKRDRKASTSYIQRRLQIGYNRA FT ASLMERMELEGIVGQANHAGKREILIEEEEGQF*" FT gene 98638..101139 FT /locus_tag="Nwi_0083" FT /colour=9 FT misc_feature join(98728..98796,98872..98940,99127..99195) FT /colour=11 FT /locus_tag="Nwi_0083" FT /note="3 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 101475..102251 FT /locus_tag="Nwi_0084" FT /product="Outer membrane lipoprotein carrier protein LolA" FT /note="PFAM: Outer membrane lipoprotein carrier protein FT LolA: (6.3e-49)" FT /note="SPTR top hit: 'Q6ND29 Hypothetical protein. FT Rhodopseudomonas palustris., evalue=5e-92, 67% identity FT hit'" FT /note="KEGG top hit: 'rpa:RPA0280 category=Unassigned, FT evalue=3e-92, 67.200000% identity hit'" FT /note="COGs: 'evalue=8e-25 score=107 category=M FT group=COG2834 Outer membrane lipoprotein-sorting protein' FT " FT /note="InterPro IPR004564" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MAGLAAALTASLFVPPALAETVPIPQPAPEVLRAAEPAILLAQAGKLEVTGTTRPPDPIIPDPRRNVPASIFATFDANQK FT AAAARVSSYLSSLRTLAGKFVQVGPDGSRSTGEFYIQKPGKVRFEYDPPSPIAMISDGSSLVIRDTRLATQDVYPLSQTP FT LRYLLSDRIDLMRDTNVVAVTSDDLYISVIIEEKQALVGTSRLMFMVGVKDGKLKQWTITDPQGYDTTVAIYNLNPTAKL FT DPALFRINGTMHPASTNN*" FT sig_peptide 101475..101534 FT /colour=11 FT /locus_tag="Nwi_0084" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 1.000 atresidue 20" FT gene 101475..102251 FT /locus_tag="Nwi_0084" FT /colour=9 FT CDS 102283..103170 FT /locus_tag="Nwi_0085" FT /EC_number="3.1.11.2" FT /product="exodeoxyribonuclease III xth" FT /note="TIGRFAM: Exodeoxyribonuclease III xth: (2.5e-36)" FT /note="PFAM: Endonuclease/exonuclease/phosphatase: FT (3.4e-40)" FT /note="SPTR top hit: 'Q6ND28 Possible exodeoxyribonuclease FT III. Rhodopseudomonas palustris., evalue=1e-129, 78% FT identity hit'" FT /note="KEGG top hit: 'rpa:RPA0281 xthA1 EC=3.1.11.2 FT category=Unassigned, evalue=1e-129, 78.597786% identity FT hit'" FT /note="COGs: 'evalue=5e-67 score=247 category=L FT group=COG0708 Exonuclease III'" FT /note="InterPro IPR000097:IPR000834:IPR004808:IPR005135" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=2 FT /translation="LWERVPEHPRGRVKVRTIDRTKHPMHLTLTTWNINSVRLRIDLVARFLKAQRPDVLCLQETKCPDDAFPLKRFHRLGYEH FT IALNGQKGYHGVAVVSKLPFDASNIRTFCDKIDSRHVSVILGGEAGLAAPLVLHNFYVPAGGDIPDPALNPKFAHKLQFL FT DEMKGCAPLHPDNGDRHVLVGDLNVAPHENDVWSHKQLLKIVSHTPIECEKLLGVQDRGNWVDIARARIPMSEKVYTWWS FT YRAADWVAANRGRRLDHIWVSEALRDGIRDFRITRDARGWERPSDHVPVTAVIEV*" FT gene 102283..103170 FT /locus_tag="Nwi_0085" FT /colour=2 FT CDS complement(103274..103756) FT /locus_tag="Nwi_0086" FT /product="cyclic nucleotide-binding protein" FT /note="PFAM: Cyclic nucleotide-binding: (2.3e-21)" FT /note="SMART: Cyclic nucleotide-binding: (3.5e-13)" FT /note="SPTR top hit: 'Q89WQ9 Bll0619 protein. FT Bradyrhizobium japonicum., evalue=7e-43, 62% identity FT hit'" FT /note="KEGG top hit: 'bja:bll0619 category=Unassigned, FT evalue=4e-43, 62.416107% identity hit'" FT /note="COGs: 'evalue=8e-14 score=69.9 category=T FT group=COG0664 cAMP-binding proteins - catabolite gene FT activator and regulatory subunit of cAMP-dependent protein FT kinases'" FT /note="InterPro IPR000595" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=15 FT /translation="MIRDGSSNRFCMSIDDDVVLLERVPTLRLLGAEALRVLAIGAEQQQFASGSILFRAGDEADGGYVVQEGGFRIHVPNGRD FT RKVVAERGTLIGELALIVPISRPATAIAREYSMVIRIPRTLFLRVLDSYPAAAQRLRDEFANRTRQTTSDILMASAKLSS FT *" FT gene complement(103274..103756) FT /locus_tag="Nwi_0086" FT /colour=15 FT CDS complement(103980..104666) FT /locus_tag="Nwi_0087" FT /product="Transcriptional regulatory protein" FT /note="PFAM: Response regulator receiver: (1.6e-33) FT Transcriptional regulatory protein, C-terminal: (2.2e-19)" FT /note="SMART: Response regulator receiver: (4.6e-36)" FT /note="SPTR top hit: 'Q89WQ8 Two-component response FT regulator. Bradyrhizobium japonicum., evalue=1e-118, 94% FT identity hit'" FT /note="KEGG top hit: 'bja:bll0620 category=Unassigned, FT evalue=1e-119, 94.736842% identity hit'" FT /note="COGs: 'evalue=3e-48 score=185 category=K FT group=COG0745 Response regulators consisting of a FT CheY-like receiver domain and a winged-helix DNA-binding FT domain'" FT /note="InterPro IPR001789:IPR001867" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=6 FT /translation="MANARKILIVDDDNDLRDTLVEQLSLHEEFEASAVDTGAKGASAARSCSPDLVLMDVGLPDTDGREVVRSLRKGGFKAPI FT IMLTGHDTDSDTILGLESGANDYIAKPFRFAVLLARIRAQLRQHEASEDAVFSVGPYSFRPGAKMLTTGNGKKVRLTEKE FT TAILRFLYRAGQMSVSRDTLLQEVWGYNSGVTTHTLETHIYRLRQKIEKDAANPEILVTEAGGYKLVP* FT " FT gene complement(103980..104666) FT /locus_tag="Nwi_0087" FT /colour=6 FT CDS 104886..105455 FT /locus_tag="Nwi_0088" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q89WQ7 Blr0621 protein. FT Bradyrhizobium japonicum., evalue=3e-72, 69% identity FT hit'" FT /note="KEGG top hit: 'bja:blr0621 category=Unassigned, FT evalue=2e-72, 69.312169% identity hit'" FT /note="COGs: 'evalue=3e-36 score=144 category=S FT group=COG3786 Uncharacterized protein conserved in FT bacteria'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MQSSYSSMPCTTNSCDRPLAAIRIRAAAGRPQRGWLIAEGRAIAVALGRGGIRANKREGDGGTPKGIFRPVRLWWRPDRH FT PRPRTFLPVRAITPMDGWCEDPADRRYNRPIRLTPHATGDRLSRDDHLYDFIIEIDHNTRPRVAGRGSAVFLHLARDNFG FT PTAGCVAMTRPAMLRLLRRIGPCTKIVIG*" FT gene 104886..105455 FT /locus_tag="Nwi_0088" FT /colour=13 FT CDS complement(105622..106296) FT /locus_tag="Nwi_0089" FT /product="Protein of unknown function UPF0001" FT /note="TIGRFAM: Protein of unknown function UPF0001: FT (2.9e-38)" FT /note="PFAM: Alanine racemase, N-terminal: (8.1e-13)" FT /note="SPTR top hit: 'Q89WQ5 Bll0623 protein. FT Bradyrhizobium japonicum., evalue=1e-94, 76% identity FT hit'" FT /note="KEGG top hit: 'bja:bll0623 category=Unassigned, FT evalue=8e-95, 76.419214% identity hit'" FT /note="COGs: 'evalue=5e-67 score=247 category=R FT group=COG0325 enzyme with a TIM-barrel fold'" FT /note="InterPro IPR001608:IPR011078" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MTMGETAPVNGLASVEAEIVRACRDARRERSTVTLVAVSKTFDADAITPVIAAGQRVFGENRVQEAQRKWPELIAAHPGL FT ALHLIGPLQSNKAKEAVALFDAIHSVDRVSLCEALAKEIDRQNRRPSLFVQINTGEEPQKAGVSPSNADDFIARCRDTHG FT LTISGLMCIPPMDDAPAPHFALTAKIARRNGIKQLSMGMSADFAIAIALGATHIRVGSAIFGTR* FT " FT gene complement(105622..106296) FT /locus_tag="Nwi_0089" FT /colour=11 FT CDS complement(106293..106997) FT /locus_tag="Nwi_0090" FT /EC_number="2.5.1.18" FT /product="glutathione S-transferase" FT /note="PFAM: Glutathione S-transferase, N-terminal: FT (3.1e-17) Glutathione S-transferase, C-terminal: FT (0.00016)" FT /note="SPTR top hit: 'Q89N11 Hypothetical glutathione FT S-transferase like protein. Bradyrhizobium japonicum., FT evalue=1e-107, 77% identity hit'" FT /note="KEGG top hit: 'bja:blr4031 category=Unassigned, FT evalue=1e-107, 77.350427% identity hit'" FT /note="COGs: 'evalue=2e-33 score=136 category=O FT group=COG0625 Glutathione S-transferase'" FT /note="InterPro IPR004045:IPR004046" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MADLAAFLITRRWPAAHPERLQLYSVPTPNGVKVSIMLEETGLPYEPHFVDFGRDEQKSREFVSLNPNGRIPAILDPDGP FT GGKPLGVFESGAILQYLAEKTGQFLPADPARRWQALQWLHFQMGGVGPMFGQVGFFHKFAGRDFQDKRPRDRYVSESKRL FT LGVMDTHLATSRWFSGDDYTIADIAMLGWVRNLIGFYDARDLVEFDRFRHVGGWLQRGLARPAVQRGLAIPARP* FT " FT gene complement(106293..106997) FT /locus_tag="Nwi_0090" FT /colour=9 FT CDS 107151..109802 FT /locus_tag="Nwi_0091" FT /EC_number="6.1.1.4" FT /product="leucyl-tRNA synthetase class Ia" FT /note="TIGRFAM: Leucyl-tRNA synthetase FT bacterial/mitochondrial, class Ia: (0)" FT /note="PFAM: Aminoacyl-tRNA synthetase, class Ia: FT (1.4e-134)" FT /note="SPTR top hit: 'Q89WQ1 Leucyl-tRNA synthetase (EC FT 6.1.1.4) (Leucine--tRNA ligase) (LeuRS). Bradyrhizobium FT japonicum., evalue=0.0, 81% identity hit'" FT /note="KEGG top hit: 'bja:blr0627 leuS EC=6.1.1.4 FT category=Metabolism; Amino Acid Metabolism; Valine, FT leucine and isoleucine biosynthesis [PATH:bja00290] FT Genetic Information Processing; Translation; FT Aminoacyl-tRNA biosynthesis [PATH:bja00970] , evalue=0.0, FT 81.993205% identity hit'" FT /note="COGs: 'evalue=0.0 score=963 category=J FT group=COG0495 Leucyl-tRNA synthetase'" FT /note="InterPro IPR001412:IPR002300:IPR002302" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=7 FT /translation="MTSERYNARDAEPRWQAEWDRQAIFATKNDDPREKYYVLEMFPYPSGRIHIGHVRNYTLGDVIARYMRARGYNVLHPMGW FT DAFGLPAENAAIERKIAPKAWTYDNIKAMKKQLRSIGLSLDWSREIATCDPAYYKHQQKMFLDFLRAGLAEREKRKINWD FT PVDMTVLANEQVIDGRGWRSGAVVEQREMNQWVFKITKFSQELLDALGTLDRWPDKVRLMQRNWIGRSEGLLIRFALDAT FT TTPNNESELKIFTTRPDTLFGARFMAIAPDHPLAQAAAKDNPALAGFIAECKQRGTAQAEIDTAEKMGFDTGIRAIHPFD FT AAWALPVYVANFILMEYGTGAIFGCPAHDQRDLDFVNKYGLGNTPVVCPEGQDPASFVITDTAYDGDGRMINSRFLDGMS FT ADAAKEEVAKRLEGETRGNEPVAERKVNFRLRDWGISRQRYWGCPIPVIHCPNCDVVPVPEKDLPVTLPEDVTFDRPGNA FT LDHHPTWKHVDCPKCGGKATRETDTMDTFVDSSWYFARFTDPWNDSAPTTREVADRMLPVDQYIGGVEHAILHLLYSRFF FT TRAMKATGHLGMDEPFKGMFTQGMVVHETYRKPDGGWASPEEVRIEVDGNNRRATLITTGEPVEIGAVEKMSKSKRNTVD FT PDDIIGSYGADTARWFMLSDSPPDRDVIWSEEGVQGAARFMQRLWRLVNEAADAGKAAPQDRPATFGSDALTLRKAAHGA FT LDRVSTGIERLHFNVCLANIREFANELADALARSRSNKSAPARDLAPDLSWSLREAAIILVQIFSPMMPHLAEECWQRAL FT GQTGLVSQARWPQIEPDLLIEDSITLPVQVNGKKRGEVTVASDAGNPEIEAAVLALDAVKQALGGKQARKIIIVPRRIVS FT VVG*" FT gene 107151..109802 FT /locus_tag="Nwi_0091" FT /colour=7 FT CDS 109789..110373 FT /locus_tag="Nwi_0092" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q89WQ0 Blr0628 protein. FT Bradyrhizobium japonicum., evalue=6e-64, 69% identity FT hit'" FT /note="KEGG top hit: 'bja:blr0628 category=Unassigned, FT evalue=3e-64, 69.491525% identity hit'" FT /note="COGs: 'evalue=8e-12 score=63.9 category=S FT group=COG5468 secreted (periplasmic) protein'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="VWWGRSPARRSGERTGSRIALRIGVVAVLAALTAGCFRPMYAERGDGGPALRDRLMGVELLPIDKPNASPDARIGVALRN FT ALAFKLYGNATGAPPTHQLKIRFGISRSSLMLDPRTALPSNESFGIDASYQLIEVATGKIVLNATTFARTSYDIPGQFQR FT FARARAYRDAEDRAAEQIAENINTRLASFFYAGT*" FT gene 109789..110373 FT /locus_tag="Nwi_0092" FT /colour=13 FT misc_feature 109846..109914 FT /colour=11 FT /locus_tag="Nwi_0092" FT /note="1 probable transmembrane helix predicted FT byTMHMM2.0" FT CDS 110384..111412 FT /locus_tag="Nwi_0093" FT /product="DNA polymerase III, delta subunit" FT /note="TIGRFAM: DNA polymerase III, delta subunit: FT (1.5e-43)" FT /note="PFAM: DNA polymerase III, delta: (1.7e-05)" FT /note="SPTR top hit: 'Q89WP9 Blr0629 protein. FT Bradyrhizobium japonicum., evalue=1e-145, 75% identity FT hit'" FT /note="KEGG top hit: 'bja:blr0629 EC=2.7.7.7 FT category=Metabolism; Nucleotide Metabolism; Purine FT metabolism [PATH:bja00230] Metabolism; Nucleotide FT Metabolism; Pyrimidine metabolism [PATH:bja00240] Genetic FT Information Processing; Replication and Repair; DNA FT polymerase [PATH:bja03030] , evalue=1e-145, 75.730994% FT identity hit'" FT /note="COGs: 'evalue=1e-36 score=147 category=L FT group=COG1466 DNA polymerase III delta subunit'" FT /note="InterPro IPR005790:IPR010372" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=2 FT /translation="MVALRGKDIDGFLARPDPARPIILLYGPDAGLVRERANALISSAVEDPNDPFSLVRLDGDDLAAEPSRLVDEAMTVPLLG FT GRRAIRIKAGSRSFASGVDTLANSTIQDCRIVIEAGELRPESPLRKACERAKNAVAIACYPDTERDLARLIDEELRASDL FT KIAPDARAALMSLLGGDRQASRNELRKIALYAHGQGEITLLDVMAVVSDASDFKLDPVIDAAFAGRPAAVEAEFAKAMVA FT GTYPGLVISAAQRFVAALHKAALLMEEGASASSATERGFPRLHFSRKASVETALSHFSAPRLVQVMDQLARAALETRKQA FT ALASAITQRALMSIAVNARRRG*" FT gene 110384..111412 FT /locus_tag="Nwi_0093" FT /colour=2 FT CDS complement(111481..112362) FT /locus_tag="Nwi_0094" FT /product="ParB-like partition protein" FT /note="TIGRFAM: ParB-like partition protein: (2.2e-55)" FT /note="PFAM: ParB-like nuclease: (4.6e-34)" FT /note="SMART: ParB-like nuclease: (6e-34)" FT /note="SPTR top hit: 'Q89WP8 Chromosome partitioning FT protein B. Bradyrhizobium japonicum., evalue=1e-131, 80% FT identity hit'" FT /note="KEGG top hit: 'bja:bll0630 parB FT category=Unassigned, evalue=1e-131, 80.689655% identity FT hit'" FT /note="COGs: 'evalue=5e-32 score=131 category=K FT group=COG1475 transcriptional regulators'" FT /note="InterPro IPR003115:IPR004437" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=6 FT /translation="MADEARSRLGRGLASLIGDVGGEAAHAERPRVQRKVPIEFLSPNPRNPRRTFSDVELAELSDSIKQHGVIQPIVVRPVKG FT MQDRFEIIAGERRWRAAQSAGLHEVPIVPVDVSDHVALEIAIVENVQREDLNAMEEAQGYHALANEFNRTQDDIAKIVGK FT SRSHVANMMRLTKLPDDVRALIASGELSAGHARALIGMPDPSTAAKRIIAEGLNVRQAEALAHEDGAAERKPQKARADKA FT RKDSDTLALEKRVSDALGLAVTVDHKDPGGVVQIRYRDLDQLDEILKRLDPKG*" FT gene complement(111481..112362) FT /locus_tag="Nwi_0094" FT /colour=6 FT CDS complement(112660..113529) FT /locus_tag="Nwi_0095" FT /product="cobyrinic acid a,c-diamide synthase" FT /note="PFAM: Cobyrinic acid a,c-diamide synthase: FT (2.7e-58)" FT /note="SPTR top hit: 'Q6ND17 Chromosome partitioning FT protein, ParA. Rhodopseudomonas palustris., evalue=1e-130, FT 86% identity hit'" FT /note="KEGG top hit: 'rpa:RPA0292 parA FT category=Unassigned, evalue=1e-130, 86.315789% identity FT hit'" FT /note="COGs: 'evalue=3e-60 score=225 category=D FT group=COG1192 ATPases involved in chromosome partitioning' FT " FT /note="InterPro IPR002586" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MAWFMTVIDDIDPRDDQGRWRARHPRIISLANQKGGVGKTTTAINLGTALAAIGERVLIVDLDPQGNASTGLGIDRRDRN FT VSTYDVLIGEAPLRDAVVPTAVPRLHIAASTMDLSGLELELGAAKDRAFRLRDAITALNGNAAYAADYTYVLIDCPPSLN FT LLTVNAMAASDAILVPLQCEFFALEGLSQLLQTVEQVRSTLNPNLSIHGIVLTMFDSRNNLSNQVVADVRQFMGSKVYDT FT MIPRNVRISEAPSYGKPVLVYDLKCSGSEAYLKLATEVIQRERELRMAH*" FT gene complement(112660..113529) FT /locus_tag="Nwi_0095" FT /colour=9 FT CDS complement(113514..114347) FT /locus_tag="Nwi_0096" FT /product="Glucose inhibited division protein" FT /note="TIGRFAM: Glucose inhibited division protein: FT (3.6e-25)" FT /note="PFAM: Glucose inhibited division protein: FT (4.1e-31)" FT /note="SPTR top hit: 'Q89WP6 Methyltransferase gidB (EC FT 2.1.-.-) (Glucose inhibited division protein B). FT Bradyrhizobium japonicum., evalue=2e-76, 64% identity FT hit'" FT /note="KEGG top hit: 'bja:bll0632 gidB EC=2.1.-.- FT category=Unassigned, evalue=1e-76, 64.876033% identity FT hit'" FT /note="COGs: 'evalue=2e-35 score=142 category=M FT group=COG0357 S-adenosylmethionine-dependent FT methyltransferase involved in bacterial cell division'" FT /note="InterPro IPR003682" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MFHVKHPQREVAATRQRAVGQWPTDPYPRRLNVWPGIRDASMLDGMSAPLQKYSPCSATDKAAALALTPVSSETEARLDA FT YVDLLVQWQTKTNLVASSTLPQLWTRHIADSLQLLALAPQAKCWADLGSGGGFPGVVLACALADIEGARVDLVERNAKKA FT AFLREAVRITASPASVHLMDIGDYVDRSEDRIDCVTARALAPLQVLLGFVEPLVNKGAKALFLKGQDVEAELTEATRYWN FT IEPRIHSSCTGGQGRIAEFDHIERRDRRGARQAWRGS*" FT gene complement(113514..114347) FT /locus_tag="Nwi_0096" FT /colour=9 FT CDS complement(114370..116241) FT /locus_tag="Nwi_0097" FT /product="Glucose-inhibited division protein A subfamily" FT /note="TIGRFAM: Glucose-inhibited division protein A FT subfamily: (3.6e-254)" FT /note="PFAM: Glucose-inhibited division protein A: FT (4.1e-256) FAD dependent oxidoreductase: (0.0013) FAD FT dependent oxidoreductase: (0.0046)" FT /note="SPTR top hit: 'Q89WP5 Glucose inhibited division FT protein A. Bradyrhizobium japonicum., evalue=0.0, 82% FT identity hit'" FT /note="KEGG top hit: 'bja:bll0633 gidA FT category=Unassigned, evalue=0.0, 82.419355% identity hit'" FT /note="COGs: 'evalue=0.0 score=875 category=D FT group=COG0445 NAD/FAD-utilizing enzyme apparently involved FT in cell division'" FT /note="InterPro FT IPR001100:IPR001327:IPR002218:IPR004416:IPR006076" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MTASFDVIVIGGGHAGCEAAAASARTGARTALVTHRFATIGAMSCNPAIGGLGKGHLVREVDALDGLMARIADAGGIQFR FT MLNRRKGPAVRGPRAQEDRKLYAAAMQAAIRETANLEVIDGEADDLIVSGGRIAGVRLTDGRRIKSAAVVVTTGTFLRGL FT IHLGEKSWPAGRVDEAPALGLSASFERIGFALGRLKTGTPPRLDGTTIDWAAVEMQPGDDPPEPFSVLTARITTPQIQCG FT ITRTTPATHDLIRTNVHRSPIYSGQITSSGPRYCPSIEDKVVRFGDRDGHQVFLEPEGLDDATVYPNGISTSLPEEVQLA FT ILATIPGLENVKMTRPGYAIEYDHVDPRELEPTLQTRRMRGLFLAGQINGTTGYEEAAAQGLVAGLNAALAAGGGDPVVF FT DRADGYLGVMIDDLVTRGITEPYRMFTSRAEYRLTLRADNADQRLTDRGIALGCVGAGRAAYHRAKMAALQAAKQGAMSL FT SVTPNEAARHGLSLNRDGHRRSAFELLSYPEIGWREVAAIWPELSAIDPAIAEHLEIDAKYDVYLKRQAADVEAFRRDEG FT LVLTEIDYSAVPGLSNEARNRLEKAQPLTVGQAGRLDGITPAALGILAAYLRREARQRTAASA* FT " FT gene complement(114370..116241) FT /locus_tag="Nwi_0097" FT /colour=9 FT CDS complement(116402..117772) FT /locus_tag="Nwi_0098" FT /product="tRNA modification GTPase TrmE" FT /note="TIGRFAM: tRNA modification GTPase TrmE: (3.7e-81) FT Small GTP-binding protein domain: (9.2e-16) GTP-binding: FT (4.4e-07)" FT /note="PFAM: GTP-binding protein, HSR1-related: (2.7e-38)" FT /note="SPTR top hit: 'Q89WP4 TRNA modification GTPase. FT Bradyrhizobium japonicum., evalue=1e-162, 64% identity FT hit'" FT /note="KEGG top hit: 'bja:bll0634 thdF FT category=Unassigned, evalue=1e-162, 64.377682% identity FT hit'" FT /note="COGs: 'evalue=1.0e-125 score=441 category=R FT group=COG0486 GTPase'" FT /note="InterPro IPR002917:IPR004520:IPR005225:IPR005289" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MHPREQTIFALSSGRPPSAIAVVRASGSQAGTALRKLAGAIPAARTAKRVLLRDSVGEAIDDAVILWFPAPASATGEDIA FT EFHVHGSRAVVNALIAALSSIDDARAAEPGEFTRRAFENGKIDLTEAEGLDDLIHADTDRQRRQALRQLQGLLGDRARGW FT RKELIDASALIEAGIDFADEEDVPEDLARPALEKIAQLRREIEQTLAASARGERLRDGLTVAIAGPPNAGKSTLLNRLAR FT REAAIVSPHAGTTRDIIEVYLDLDGYPVTLIDTAGIRETDDPVEQEGVRRARDRVAKADLVLWLSDDHGGEPDQTIRSGE FT TSLWLIRNKIDLAGPENDGAKPGRFETKAGQSAPPWRFRISASRGDGVDDLVSALTAFAEKLLGSSEAGVITRLRHRNIL FT RDAVASLAKAETLAGRGDELVAEELRIAIHLMGRLLGRVDIDDILDSLFKEFCIGK* FT " FT gene complement(116402..117772) FT /locus_tag="Nwi_0098" FT /colour=11 FT CDS 118015..120045 FT /locus_tag="Nwi_0099" FT /product="Protein of unknown function DUF255" FT /note="PFAM: Protein of unknown function DUF255: FT (1.1e-45)" FT /note="SPTR top hit: 'Q8FY27 Hypothetical protein. FT Brucella suis., evalue=1e-154, 44% identity hit'" FT /note="KEGG top hit: 'bms:BR2063 category=Unassigned, FT evalue=1e-155, 44.888889% identity hit'" FT /note="COGs: 'evalue=0.0 score=668 category=O FT group=COG1331 Highly conserved protein containing a FT thioredoxin domain'" FT /note="InterPro IPR004879" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MNQAAGSSGRLANRLSAETSPYLLQHQHNPVDWWPWGPEALAEAQRSNRPILLSIGYAACHWCHVMAHESFEDDDVAAVM FT NELFVCIKVDREERPDIDQIYMSALHHLGEQGGWPLTMFLSPDGSPFWGGTYFPKLPDFGRPAFTDVLQSVARVFRDQPD FT QIARHRDTLIARLSERATTKSPANLGVAELNNAAVAIMRSTDPVNGGLRGAPKFPQCSVLELLWRAGARTRDDRFFAATT FT LTLTRMSQGGIYDHIGGGYARYSVDDRWLVPHFEKMLYDNAQILDLLALDYARSKNPLYRERAIETVDWLRREMLTAEGG FT FASSLDADSEGEEGRFYVWSLSEIDDVLGAADAADFAARYDITANGNFERRNIPNRLKSIDVANDDSAHMRALRKKLLVR FT RESRVRPGLDDKILADWNGLMIAALVHGACVFDKPDWLRIARAAYDFIRTMMTRDGRLGHSWREGRLLIPALASDYATMA FT RAALALFEATGDGTFLEQALRWQSTLDTHYADAAHGGYYLTADDAEGLIVRPHSSEDDAIPNHDGVIAQNLVRLAALTGD FT AKWRDRIDSHFAALLPRATEKGFGQLSLMNALDLRLTGAEIVVAGEDAQAAALLGAARKLPYATSIVLHAPHADALPADH FT PARAKLSAVAQSAAFICRGQSCSLPVTQPDALNELM*" FT gene 118015..120045 FT /locus_tag="Nwi_0099" FT /colour=9 FT CDS complement(120114..121379) FT /locus_tag="Nwi_0100" FT /EC_number="3.6.3.15" FT /product="transcription termination factor Rho" FT /note="TIGRFAM: Transcription termination factor Rho: FT (6.6e-229)" FT /note="PFAM: H+-transporting two-sector ATPase, alpha/beta FT subunit, central region: (1.5e-78) Rho termination factor, FT N-terminal: (1.6e-20) Rho termination factor, RNA-binding: FT (1.9e-58)" FT /note="SMART: ATPase (2.8e-12) Cold shock protein: FT (2.1e-22)" FT /note="SPTR top hit: 'Q6ND13 Transcription termination FT factor rho. Rhodopseudomonas palustris., evalue=0.0, 96% FT identity hit'" FT /note="KEGG top hit: 'rpa:RPA0296 rho FT category=Unassigned, evalue=0.0, 96.912114% identity hit'" FT /note="COGs: 'evalue=0.0 score=720 category=K FT group=COG1158 Transcription termination factor'" FT /note="InterPro FT IPR000194:IPR003593:IPR004665:IPR011112:IPR011113:IPR011129" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=6 FT /translation="MREMKLQDLKAKTPAELVSFAEELGVENASTMRKQELMFAILKQLAIQETDIIGEGVVEVLSDGFGFLRSPDANYLPGPD FT DIYVSPSQIRRFGLRTGDTIEGHIRSPKEGERYFALLKVNTLNFEDPEKSKHKVNFDNLTPLFPDQRFRLELEDPTRKDL FT SARVIDIVAPIGKGQRALIVAPPRTGKTVLMQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAV FT RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIA FT TALVDTGSRMDEVIFEEFKGTGNSELILDRKVADKRTFPAIDIARSGTRKEELITDPQLLKKMYVLRRILNPMGTMDAIE FT FLLDKLRNTKNNSEFFESMNT*" FT gene complement(120114..121379) FT /locus_tag="Nwi_0100" FT /colour=6 FT CDS complement(121775..122197) FT /locus_tag="Nwi_0101" FT /product="Conserved hypothetical protein" FT /note="TIGRFAM: Conserved hypothetical protein 701: FT (8.6e-51)" FT /note="PFAM: Conserved hypothetical protein 701: FT (2.7e-51)" FT /note="SPTR top hit: 'Q89WP2 Bll0636 protein. FT Bradyrhizobium japonicum., evalue=6e-57, 75% identity FT hit'" FT /note="KEGG top hit: 'bja:bll0636 category=Unassigned, FT evalue=3e-57, 75.539568% identity hit'" FT /note="COGs: 'evalue=3e-40 score=157 category=S FT group=COG1981 membrane protein'" FT /note="InterPro IPR005265" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MYEWIKAFHVIAIISWMAGMLYLPRLFVYHCDAEIGSKQSETFKVMERRLFKAIINPAMMIAWGLGLYMMWERQWYAVGW FT FQGKLGLVILMSAVHGYFARRVRDFAADRNVMSQKFYRIINEVVTALMVGIVILVIVKPS* FT " FT gene complement(121775..122197) FT /locus_tag="Nwi_0101" FT /colour=13 FT misc_feature complement(join(121787..121840,121904..121969,121982..122047,122111..122167)) FT /colour=11 FT /locus_tag="Nwi_0101" FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 122627..123469 FT /locus_tag="Nwi_0102" FT /product="Protein of unknown function DUF299" FT /note="PFAM: Protein of unknown function DUF299: FT (1.5e-115)" FT /note="SPTR top hit: 'Q6ND11 Hypothetical UPF0085 protein FT RPA0298. Rhodopseudomonas palustris., evalue=1e-126, 83% FT identity hit'" FT /note="KEGG top hit: 'rpa:RPA0298 category=Unassigned, FT evalue=1e-127, 83.636364% identity hit'" FT /note="COGs: 'evalue=2e-80 score=292 category=S FT group=COG1806 Uncharacterized protein conserved in FT bacteria'" FT /note="InterPro IPR005177" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MAPGTGRDFHLHLVSDSTGETLITVSRAVTAQYAGVTPIEHVYPLVRSEKQLDRVLAEIEEAPGIVLFTLLEKDVAVRLE FT ARCQEINCPSLSIIGPVMQLFQAYLGADTTGRVGAQHTLNADYFKRIDALNYTMMHDDGQHVESLEEADVVLVGVSRTSK FT TPTSVYLANRGTRTANVPLVPGIAIPRQLETLKNPLVVSLHAAPERLIQVRQNRLLSIGAGPGNEAYIDRQSVTEEVIHA FT RRLSVKHDWAQLDVTRRSIEETAAAIMKLFADRRRQRRPD*" FT gene 122627..123469 FT /locus_tag="Nwi_0102" FT /colour=13 FT CDS 123476..124084 FT /locus_tag="Nwi_0103" FT /product="Maf-like protein" FT /note="TIGRFAM: Maf-like protein: (5.7e-30)" FT /note="PFAM: Maf-like protein: (4.7e-36)" FT /note="SPTR top hit: 'Q89WP0 Maf-like protein blr0638. FT Bradyrhizobium japonicum., evalue=3e-65, 63% identity FT hit'" FT /note="KEGG top hit: 'bja:blr0638 category=Unassigned, FT evalue=1e-65, 63.366337% identity hit'" FT /note="COGs: 'evalue=3e-44 score=171 category=D FT group=COG0424 Nucleotide-binding protein implicated in FT inhibition of septum formation'" FT /note="InterPro IPR003697" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MAIWRGSEPLILASQSRVRQLLLANAGLPFETMPAAIDERAVQRSSGLTTAGEIAVRLACEKAREVSSRSPGRYVIGADQ FT TLECDGRLLNKPAGRADAGAHLRALSGRTHALHAGVAVVRDGRLMFENVSVARMTMRELSEDTIESYLDAAGDAASASVG FT AYQLEGLGIHLFSRIEGDHFTILGLPLLPLLAYLRSQWLLSL*" FT gene 123476..124084 FT /locus_tag="Nwi_0103" FT /colour=9 FT CDS 124101..124700 FT /locus_tag="Nwi_0104" FT /EC_number="2.7.1.24" FT /product="dephospho-CoA kinase" FT /note="TIGRFAM: Dephospho-CoA kinase: (1.9e-35)" FT /note="PFAM: Dephospho-CoA kinase: (6.8e-32)" FT /note="SPTR top hit: 'Q6ND09 Dephospho-CoA kinase (EC FT 2.7.1.24) (Dephosphocoenzyme A kinase). Rhodopseudomonas FT palustris., evalue=1e-81, 79% identity hit'" FT /note="KEGG top hit: 'rpa:RPA0300 coaE EC=2.7.1.24 FT category=Metabolism; Metabolism of Cofactors and Vitamins; FT Pantothenate and CoA biosynthesis [PATH:rpa00770] , FT evalue=6e-82, 79.797980% identity hit'" FT /note="COGs: 'evalue=2e-43 score=168 category=H FT group=COG0237 Dephospho-CoA kinase'" FT /note="InterPro IPR001977" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=12 FT /translation="MLVIGLTGSIGMGKSTTARLFSEAGVPVYDADATVHAIYEGEAAFLVEAAFPGTTVNGKVDREKLSAKVVHDAAAMKRLE FT QIVHPLLYDYRQAFLQQAERSGAAVAVIDVPLLFETGGERSVDAVVVVTTTPEIQRERILARGNMTSEKLKAIQARQLPD FT AEKRKRADFVVDTSHGVDAVRTQIREILAAAAKMPRRRS*" FT gene 124101..124700 FT /locus_tag="Nwi_0104" FT /colour=12 FT CDS 124822..125541 FT /locus_tag="Nwi_0105" FT /EC_number="2.7.7.7" FT /product="DNA polymerase III, epsilon subunit" FT /note="TIGRFAM: DNA polymerase III, epsilon subunit: FT (7.7e-47) DNA polymerase 3, epsilon subunit: (3.3e-104)" FT /note="PFAM: Exonuclease: (6.8e-40)" FT /note="SMART: Exonuclease: (2.6e-48)" FT /note="SPTR top hit: 'Q6ND08 Putative DNA polymerase III FT epsilon chain. Rhodopseudomonas palustris., evalue=1e-103, FT 82% identity hit'" FT /note="KEGG top hit: 'rpa:RPA0301 dnaQ, mutD EC=2.7.7.7 FT category=Metabolism; Nucleotide Metabolism; Purine FT metabolism [PATH:rpa00230] Metabolism; Nucleotide FT Metabolism; Pyrimidine metabolism [PATH:rpa00240] Genetic FT Information Processing; Replication and Repair; DNA FT polymerase [PATH:rpa03030] , evalue=1e-103, 82.017544% FT identity hit'" FT /note="COGs: 'evalue=4e-42 score=164 category=L FT group=COG0847 DNA polymerase III epsilon subunit and FT related 3'-5' exonucleases'" FT /note="InterPro IPR002453:IPR006054:IPR006055:IPR006309" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=2 FT /translation="MREIVLDTETTGLDPLRGDRLVEIGCVEMFNRMPTGQTFHRYINPERDMPQEAFAVHGLSSDFLADKPLFAHVVDEFLEF FT IGDAPLVIHNASFDISFINAELDRLKRQAIGRDRLVDTLLLARRKHPGVSNRLDDLCSRYAIDNSRRTKHGALLDAELLA FT EVYIDLIGARQSQLILVETAPRQRGGSLEMPRRQRTVPLASRVTAADRIAHREFIATLGEKAIWMEFLEQDSEKTRTGL* FT " FT gene 124822..125541 FT /locus_tag="Nwi_0105" FT /colour=2 FT CDS complement(125554..126033) FT /locus_tag="Nwi_0106" FT /product="protein export chaperone SecB" FT /note="TIGRFAM: Bacterial protein export chaperone SecB: FT (2.8e-41)" FT /note="PFAM: Bacterial protein export chaperone SecB: FT (9.2e-45)" FT /note="SPTR top hit: 'Q89WN7 Protein-export protein. FT Bradyrhizobium japonicum., evalue=3e-72, 82% identity FT hit'" FT /note="KEGG top hit: 'bja:bll0641 secB category=Genetic FT Information Processing; Folding, Sorting and Degradation; FT Protein export [PATH:bja03060] , evalue=2e-72, 82.802548% FT identity hit'" FT /note="COGs: 'evalue=3e-41 score=161 category=U FT group=COG1952 Preprotein translocase subunit SecB'" FT /note="InterPro IPR003708" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MTNGNGTPPETAPSPQLNVLAQYTKDFSFENPNSPASLAPQQQPPSINVQINVGASNVAENDYEVVLKVEGKAEHAGKLM FT FSFELAYAGVFRIVNVPQENLHPLVMIECPRLLFPFAREIVATAVRDGGFPPLMLDPIDFVSLYRQNMERQAAAQQQPS* FT " FT gene complement(125554..126033) FT /locus_tag="Nwi_0106" FT /colour=9 FT CDS 126485..127189 FT /locus_tag="Nwi_0107" FT /product="conserved hypothetical protein" FT /note="PFAM: Mitochondrial import inner membrane FT translocase, subunit Tim44: (3.9e-66)" FT /note="SPTR top hit: 'Q89WN6 Blr0642 protein. FT Bradyrhizobium japonicum., evalue=1e-94, 73% identity FT hit'" FT /note="KEGG top hit: 'bja:blr0642 category=Unassigned, FT evalue=6e-95, 73.191489% identity hit'" FT /note="COGs: 'evalue=4e-45 score=174 category=S FT group=COG4395 Uncharacterized protein conserved in FT bacteria'" FT /note="InterPro IPR007379" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="VDIYTIIFLALAVFIFLRLRSVLGQRTGSERPPYDRATREVLGGTQDNNVVPVPGTVINQSSAAPSADVGGAADRWKSVA FT EPGTPLALGLDAIAAQDSSFDPAHFLSGARSAYEMIVLAFANGDRRTLKDLLSSDVYESFDAAIKDRERLEQKTETRFVS FT IDKVELIGAEVRDGAEQLTVRFISQMISVTRDKTGAIVDGNPEKISDITDVWTFARDISSRDPNWKLVGTGSAS* FT " FT gene 126485..127189 FT /locus_tag="Nwi_0107" FT /colour=13 FT CDS 127167..128675 FT /locus_tag="Nwi_0108" FT /product="Membrane-bound lytic murein FT transglycosylase" FT /note="PFAM: MltA: (5.2e-106) 3D: (1.4e-34)" FT /note="SPTR top hit: 'Q89WN5 Blr0643 protein. FT Bradyrhizobium japonicum., evalue=1e-178, 66% identity FT hit'" FT /note="KEGG top hit: 'bja:blr0643 EC=3.2.1.- FT category=Metabolism; Carbohydrate Metabolism; Nucleotide FT sugars metabolism [PATH:bja00520] Metabolism; Carbohydrate FT Metabolism; Aminosugars metabolism [PATH:bja00530] FT Metabolism; Glycan Biosynthesis and Metabolism; FT Glycosaminoglycan degradation [PATH:bja00531] , FT evalue=1e-178, 66.594360% identity hit'" FT /note="COGs: 'evalue=7e-76 score=278 category=M FT group=COG2821 Membrane-bound lytic murein FT transglycosylase'" FT /note="InterPro IPR005300:IPR010611" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="LAPEAPAELYRVRRFAVGLCIAAATAPVTVQAQGSGHRSVGPLEITGAQYSPVAFADIAGWNTDNHLEAFKAFRASCRGV FT TARRVSAVSHKALGASLREPCRVAKPMNISDNAKARAFFEDHFRAVRISRLGETDGFVTGYYEPIIDGSRTRTDVYTVPV FT YRRPSNLFVRGFSQSAPSLPNSGPVFRKIGRRKLVPYYDRAEIEDGAIEGRGLEICWLKSQTDLLFTQIQGSARVRLEDG FT STIRINYDSYNGYPYTAVGRILIERDIIPKDQMSMQRIRQWMADNPDGANELRRQNRSYVFFHEVKLSDNDEAIGAQGLP FT LTPGRSIAVDKSLHVYGTPFFIEGELPIESAQAKTPFHRLMIAQDTGSAIVGPARADLYFGAGSEAGRVSGRLRHNMNFV FT MLVPNSLDPVARARTMPLPETRPSATIARLFPPSDQKPGSTPPASGLSSTPAREQTGAAAVPTAKAASSEAAPLPSARPG FT VRSSRKPRYRKHQRRLWHRRAR*" FT gene 127167..128675 FT /locus_tag="Nwi_0108" FT /colour=9 FT CDS 128672..129250 FT /locus_tag="Nwi_0109" FT /product="Smr protein/MutS2" FT /note="PFAM: Smr protein/MutS2 C-terminal: (5.8e-25)" FT /note="SPTR top hit: 'Q6ND04 Possible DNA mismatch repair FT protein (MutS). Rhodopseudomonas palustris., evalue=5e-51, FT 59% identity hit'" FT /note="KEGG top hit: 'rpa:RPA0305 mutS FT category=Unassigned, evalue=3e-51, 59.701493% identity FT hit'" FT /note="COGs: 'evalue=1e-24 score=106 category=S FT group=COG2840 Uncharacterized protein conserved in FT bacteria'" FT /note="InterPro IPR002625" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MKRFSPDASARPRRRRVLTDEERRLWESVAGQAKPLRKPSPPDSFQPRLEVKSASIAEFATRSESDPTGKAVRFNNPPRA FT ALTRRERSQLSRGRKDIDARIDLHGMTQTRAYRALLRFLQDASGDGLIFVLVITGKGRAKGADSERGVLRRQVPQWLALP FT EFRSLVVGFDEAHLGHGGEGALYVRLRRRVRA*" FT gene 128672..129250 FT /locus_tag="Nwi_0109" FT /colour=13 FT CDS 129419..130759 FT /locus_tag="Nwi_0110" FT /product="Histidine kinase" FT /note="PFAM: ATP-binding region, ATPase-like: (2.2e-19) FT Histidine kinase A, N-terminal: (5.4e-08)" FT /note="SMART: ATP-binding region, ATPase-like: (2.1e-16) FT Histidine kinase A, N-terminal: (4.7e-09)" FT /note="SPTR top hit: 'Q6NCA0 Two component sensor FT histidine kinase, RegS. Rhodopseudomonas palustris., FT evalue=0.0, 72% identity hit'" FT /note="KEGG top hit: 'rpa:RPA0572 regS EC=2.7.3.- FT category=Unassigned, evalue=0.0, 72.850679% identity hit'" FT /note="COGs: 'evalue=5e-20 score=93 category=T FT group=COG0642 Signal transduction histidine kinase'" FT /note="InterPro FT IPR000577:IPR003594:IPR003661:IPR004358:IPR005467" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=15 FT /translation="MPDVAASDFRHPRRYVRLDTILRLRWLAALGQLAAIFVVAQGLQFDLPIIPCVVIVGLSSLLNLVLQVSFNPMQRLEPRH FT AAALLALNIAELAVLLFFTGGLQNPFSYLFLAPVLISATALPTRMTMALGGFAVACATVLGFTHLPLPWDASNPLILPPI FT YLIGVWLSIVLAIGVTSLYTFQVTEQARKLSDALAATELVLTREQHLTQIDGLAAAAAHELGTPLSTIFLISRELEKALQ FT ENGAQEPQRLAGDLRIVREQAQRCRDILAKIAQLSSSGAPFDRMPLSTLIEETVAPHRDFGIDIKTRIEAAGDHEPVGIR FT NPAILYGVGNILENAVDFARSAVEVNAWWSKDSVEIVIADDGPGIVPDILKRIGEPYLSRRRNVGDAQSGRTGLGLGIFI FT ARTLLERTGARVSFKNRTFPDHGAVVRIVWPRIRFETAKTIAETTG*" FT gene 129419..130759 FT /locus_tag="Nwi_0110" FT /colour=15 FT misc_feature join(129479..129547,129557..129625,129659..129718,129728..129781,129800..129859,129887..129955) FT /colour=11 FT /locus_tag="Nwi_0110" FT /note="6 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 130852..131406 FT /locus_tag="Nwi_0111" FT /product="helix-turn-helix, Fis-type" FT /note="TIGRFAM: Helix-turn-helix, Fis-type: (7.5e-08)" FT /note="PFAM: Response regulator receiver: (1.3e-24)" FT /note="SMART: Response regulator receiver: (2.3e-25)" FT /note="SPTR top hit: 'Q6NCA1 Two-component transcriptional FT regulator RegR, Fis family. Rhodopseudomonas palustris., FT evalue=6e-88, 88% identity hit'" FT /note="KEGG top hit: 'rpa:RPA0571 regR FT category=Unassigned, evalue=4e-88, 88.043478% identity FT hit'" FT /note="COGs: 'evalue=3e-65 score=241 category=K FT group=COG4567 Response regulator consisting of a CheY-like FT receiver domain and a Fis-type HTH domain'" FT /note="InterPro IPR001789:IPR002197" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=6 FT /translation="VNATPDVSPQADRSLLIVEDDKPFLERLSRAMETRGFNVTPCDSVSDGLAHIGKSAPAFAVVDLRLGDGNGLDVVSALKR FT ERPDARAIVLTGYGNIATAVTAVKLGAIDYLSKPADADDVVAALLASGTAKSEVPPNPMSADRVRWEHIQRIYEMCNRNV FT SETARRLNMHRRTLQRILAKRAPR*" FT gene 130852..131406 FT /locus_tag="Nwi_0111" FT /colour=6 FT CDS complement(131536..132027) FT /locus_tag="Nwi_0112" FT /product="Protein of unknown function DUF1052" FT /note="PFAM: Protein of unknown function DUF1052: FT (4.4e-94)" FT /note="SPTR top hit: 'O86126 Hypothetical protein (Blr0903 FT protein). Bradyrhizobium japonicum., evalue=2e-67, 75% FT identity hit'" FT /note="KEGG top hit: 'bja:blr0903 category=Unassigned, FT evalue=9e-68, 75.625000% identity hit'" FT /note="COGs: 'evalue=5e-43 score=167 category=S FT group=COG5321 Uncharacterized protein conserved in FT bacteria'" FT /note="InterPro IPR009394" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="METNAAHIALMVPPDRRQSATALAIARGTGRLLRSLGFACLSELSLPSGRRADLVAVNARGEIWIVEIKSSADDLRADRK FT WQDYRAHCDRLFFAFTRDLRCDIFPGDTGLIVADAYGAYLHCEAPEHRLPSPTRKAMMLRFGMAAAQRLNRLADPQGHAE FT SEF*" FT gene complement(131536..132027) FT /locus_tag="Nwi_0112" FT /colour=13 FT CDS 132223..132897 FT /locus_tag="Nwi_0113" FT /EC_number="3.1.2.6" FT /product="beta-lactamase-like" FT /note="PFAM: Beta-lactamase-like: (8.6e-29)" FT /note="SPTR top hit: 'Q6NCA4 Probable hydrolase. FT Rhodopseudomonas palustris., evalue=7e-94, 74% identity FT hit'" FT /note="KEGG top hit: 'rpa:RPA0568 category=Unassigned, FT evalue=4e-94, 74.193548% identity hit'" FT /note="COGs: 'evalue=2e-29 score=122 category=R FT group=COG0491 Zn-dependent hydrolases including FT glyoxylases'" FT /note="InterPro IPR001279" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MTREDQTRAKVGAAIIPVTPFRQNCTLLWCEATRDGVVIDPGGDIPLIRAAIKQAGVTVGRIWLTHGHIDHVGGAAELRD FT ALKVPIMGPHVADKFLLDHVVESGRHYGMTGMRDFVPDRWLEDGDQVEVGQLAFDVLHCPGHSPGSVVFFNADLHFAHVG FT DVLFNGSVGRTDLPGGSRAVLIKSITDKLLPLGDDVAFICGHGPGSTIGHERVSNPFLTGNVCD* FT " FT gene 132223..132897 FT /locus_tag="Nwi_0113" FT /colour=11 FT CDS complement(133009..135828) FT /locus_tag="Nwi_0114" FT /product="Signal transduction histidine kinase" FT /note="TIGRFAM: PAS: (6.2e-19)" FT /note="PFAM: PAS: (0.005) Response regulator receiver: FT (1.7e-23) ATP-binding region, ATPase-like: (4.5e-29) FT Histidine kinase A, N-terminal: (6e-12)" FT /note="SMART: PAS: (1e-05) PAC motif: (2.3e-05) Response FT regulator receiver: (1.3e-28) ATP-binding region, FT ATPase-like: (2.8e-26) Histidine kinase A, N-terminal: FT (1.2e-12)" FT /note="SPTR top hit: 'Q8P822 Histidine kinase/response FT regulator hybrid protein. Xanthomonas campestris (pv. FT campestris)., evalue=1e-155, 38% identity hit'" FT /note="KEGG top hit: 'xcb:XC_1686 category=Unassigned, FT evalue=1e-155, 38.350515% identity hit'" FT /note="COGs: 'evalue=3e-31 score=131 category=T FT group=COG4191 Signal transduction histidine kinase FT regulating C4-dicarboxylate transport system'" FT /note="InterPro FT IPR000014:IPR000700:IPR001610:IPR001789:IPR003594:IPR003661:IPR004358:IPR005467" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=15 FT /translation="MPEKESVSSGAFLAGGGEMGELTRRFDWDSTSVGTPDAWPQSLRTAVRIVLNTNHPMFIWWGSDLIQFYNDAYRQTLGPE FT RHPGALGQKGRECWAEIWDIIGPQIEYVMSGRGATWHEEQLVPVTRNGRLEQVYWTYGFSPIDDEEGVGGVLVVCRDVTR FT EHLARMALQERETELARVQAIGRIGGLEVDLRTGHRSRKSPEYLKIHGLPSDAVHESREDWLRRVHPDDRAVAEGQFIDA FT IRGGDREYAVRYRIIRPNDGETRWISARSVIERDADGKAIRLFGAHIDITDQVEAERSIRQREQEFRTLAEALPHHVWTA FT TSDGSFNWFNRRFYDYVGARPGEPGGNDWNRIVHPDDAPAAAAARTRAVTSGEPYEIEFRLRRSDGVYHWFLSRALPARD FT EDGRIIRWIGTDTDVHDQKRIAAKLAELNATLAERVEEKTRERDRIWNVSQDLLLVMDQHGIWRSVNPAWTRTLGWSEAE FT LTERTAEWIEHPDDIVKTRVEVRRLARGKATVRFENRLRHKDGSYRWLSWTAVPDQNLIYAVARDVTAEKAAAERLRAAE FT EALRQSQKMEAVGQLTGGIAHDFNNLLTGIVGSLDLLQTHIKQGRTDRAGRYIEAAMASANRAAALTHRLLAFARRQPLV FT PKPVDANQLILSLEDLLRRTIGEAIELKIAPSKLLWPTLCDPNQLESALLNLAINARDAMPNGGRLTIATANVSLDTAGS FT GSSTRQPGDYICITVADTGTGMTADVAARAFDPFFTTKPIGHGTGLGLSMIYGFARQSNGHIALDTAPGRGTSISLSLPR FT HDSVAEAVQASPASRITATGGTVLVVEDEPVVRGIIVEMLHDQGYVTREAADGAEGLRILQLDKPVDLLLTDIGLPGMNG FT RQLADQARELRPDLKILFMTGYADNAANAKGFLQPGMDMITKPFDLGHLSRRVRDIISH* FT " FT gene complement(133009..135828) FT /locus_tag="Nwi_0114" FT /colour=15 FT CDS 135988..136941 FT /locus_tag="Nwi_0115" FT /product="Protein of unknown function UPF0011" FT /note="TIGRFAM: Protein of unknown function UPF0011: FT (3.8e-67)" FT /note="PFAM: Uroporphyrin-III C/tetrapyrrole FT (Corrin/Porphyrin) methyltransferase: (3.2e-34)" FT /note="SPTR top hit: 'Q89WK8 Bll0670 protein. FT Bradyrhizobium japonicum., evalue=1e-116, 72% identity FT hit'" FT /note="KEGG top hit: 'bja:bll0670 category=Unassigned, FT evalue=1e-117, 72.929936% identity hit'" FT /note="COGs: 'evalue=7e-77 score=280 category=R FT group=COG0313 methyltransferases'" FT /note="InterPro IPR000878:IPR008189" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MRAKSASPKFHIETPRIRTFSIAGHQLAAPAAAPGLHLVATPIGHLGDITLRALETLAGVDFIACEDTRITRRLTERYAI FT TGLLKPYHEHNAATARPKILAQLAQGASIALVSDAGTPLISDPGFKLVRDVCAAGHQVIALPGASSVLAALSVAALPTDR FT FFFEGFLPAKETARRTRLAELATIDATLVMFESGSRIRRALPDLAAVLGNRAAAICRELTKLHQDIHRAGLTELAEVAAT FT LETRGEFVLVVGPPAEDSGALSSGDLDELLLSLLKEGSVKDSVARAVEISGHPRRQVYARALELAGQIRDIGDNGCK* FT " FT gene 135988..136941 FT /locus_tag="Nwi_0115" FT /colour=11 FT CDS 136979..137335 FT /locus_tag="Nwi_0116" FT /product="Protein of unknown function UPF0102" FT /note="TIGRFAM: Protein of unknown function UPF0102: FT (3.1e-12)" FT /note="PFAM: Protein of unknown function UPF0102: FT (1.1e-27)" FT /note="SPTR top hit: 'Q89WK9 Hypothetical UPF0102 protein FT bll0669. Bradyrhizobium japonicum., evalue=9e-48, 81% FT identity hit'" FT /note="KEGG top hit: 'bja:bll0669 category=Unassigned, FT evalue=4e-48, 81.196581% identity hit'" FT /note="COGs: 'evalue=1e-24 score=104 category=L FT group=COG0792 endonuclease distantly related to archaeal FT Holliday junction resolvase'" FT /note="InterPro IPR003509" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=2 FT /translation="VRVAAFHAGLSAERRAAAYLIAKGYRILARRFRTPYGEIDIVARRRQLLAFVEVKARRSLDDAAYAVTRKQQQRIINAAQ FT AWLMAHPEHETFEFRFDAMLIAPRRLPRHLLGAFDAST*" FT gene 136979..137335 FT /locus_tag="Nwi_0116" FT /colour=2 FT CDS 137378..138331 FT /locus_tag="Nwi_0117" FT /EC_number="6.3.2.3" FT /product="glutathione synthetase" FT /note="TIGRFAM: Glutathione synthetase, prokaryotic: FT (6.8e-154)" FT /note="PFAM: Prokaryotic glutathione synthetase, FT N-terminal: (1.2e-45) Prokaryotic glutathione synthetase, FT ATP-binding: (4.8e-106)" FT /note="SPTR top hit: 'P61396 Glutathione synthetase (EC FT 6.3.2.3) (Glutathione synthase) (GSH synthetase) (GSH-S) FT (GSHase). Rhodopseudomonas palustris., evalue=1e-150, 84% FT identity hit'" FT /note="KEGG top hit: 'rpa:RPA0322 gshB EC=6.3.2.3 FT category=Metabolism; Amino Acid Metabolism; Glutamate FT metabolism [PATH:rpa00251] Metabolism; Metabolism of Other FT Amino Acids; Glutathione metabolism [PATH:rpa00480] , FT evalue=1e-150, 84.345048% identity hit'" FT /note="COGs: 'evalue=6e-62 score=231 category=J FT group=COG0189 Glutathione synthase/Ribosomal protein S6 FT modification enzyme (glutaminyl transferase)'" FT /note="InterPro IPR004215:IPR004218:IPR006284" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=7 FT /translation="MKLKVAVQMDPIARINIRGDSTFALLLEAQRRGHDVSYYTPDKLSLRGRDVVAPVQPLTVRDHHGDHFTLGDATRAPLES FT FDVVLLRQDPPFDLAYITTTHLLERIHPKTLVVNNPASVRNAPEKLFVMDFPDLMPPTLISRDLDEINSFRAEHGAVVMK FT PLHGHGGAAVFRVMPQDMNFGSLFDMFSVTFRESWVIQRFLPEVSRGDKRIILVDGEFAGAVNRVPAADDLRSNMVRGGA FT ARATDLTPRESEICERIGPALRERGLLFVGIDVIDGLLTEINVTSPTGIRAIAALGGPDVAAIVWDRIEAKRSQAPG* FT " FT gene 137378..138331 FT /locus_tag="Nwi_0117" FT /colour=7 FT CDS 138414..139952 FT /locus_tag="Nwi_0118" FT /EC_number="6.6.1.1" FT /product="Mg chelatase-related protein" FT /note="TIGRFAM: Mg chelatase-related protein: (3.1e-174)" FT /note="PFAM: Magnesium chelatase, ChlI subunit: (1.9e-56)" FT /note="SMART: ATPase (5.1e-11)" FT /note="SPTR top hit: 'Q89WL7 Bll0661 protein. FT Bradyrhizobium japonicum., evalue=0.0, 88% identity hit'" FT /note="KEGG top hit: 'bja:bll0661 category=Unassigned, FT evalue=0.0, 88.281250% identity hit'" FT /note="COGs: 'evalue=1.0e-171 score=595 category=O FT group=COG0606 ATPase with chaperone activity'" FT /note="InterPro FT IPR000408:IPR000523:IPR001208:IPR003593:IPR004482" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MVQRVSTVAFEGIEARAVDVQVQVAPGLPAFNIVGLPDKAVSEARERVRAALIASGLALPARRITVNLAPADLPKEGSHY FT DLPIALGLMAAIGAIPSDALAGFTVLGELGLDGSIAAVAGVLPAAIGANAREDGLICPSACGAEAAWASPDIQIIAASSL FT IQIANHFKGTQVLSRPQPRIRETQGSALDLRDIKGQESAKRALEIAAAGGHHLLMVGSPGSGKSMLAARLPSILPPLSPA FT ELLELSMIASVAGEIDGGALTSQRPFRAPHHSASMAALTGGGTRARPGEISLAHNGVLFLDELPEFDPRVLDSLRQPLEN FT GEIAVSRANHRVTYPARFMLVAAMNPCRCGHAFEPGYACKRGRIDRCTADYQMRISGPLLDRIDLRIEVPAVTASDLILP FT PSSEGSAEVGARVAAARDIQTERYAALGLSNVRTNAEAPAAALEAIAQPDAQGLKLLHDAAESMRLSARGYHRVLRVART FT LADLDGADRIGRLYLAEALSYRALADDIKRAA*" FT gene 138414..139952 FT /locus_tag="Nwi_0118" FT /colour=9 FT CDS 140139..142403 FT /locus_tag="Nwi_0119" FT /product="Signal transduction histidine kinase" FT /note="TIGRFAM: PAS: (7.6e-09)" FT /note="PFAM: Response regulator receiver: (8e-32) FT ATP-binding region, ATPase-like: (1e-37) Histidine kinase FT A, N-terminal: (6.3e-25)" FT /note="SMART: Response regulator receiver: (7.4e-39) FT ATP-binding region, ATPase-like: (1e-37) Histidine kinase FT A, N-terminal: (1.8e-25)" FT /note="SPTR top hit: 'Q89WL9 Two-component hybrid sensor FT and regulator. Bradyrhizobium japonicum., evalue=0.0, 64% FT identity hit'" FT /note="KEGG top hit: 'bja:bll0659 category=Unassigned, FT evalue=0.0, 64.181092% identity hit'" FT /note="COGs: 'evalue=9e-41 score=162 category=T FT group=COG0642 Signal transduction histidine kinase'" FT /note="InterPro FT IPR000014:IPR001789:IPR003594:IPR003661:IPR004358:IPR005467" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=15 FT /translation="MTARLFWTKARLRARRLIRRHPRLNVAFRTFMAFSIAFGGAYGFIAGSLSADYDPHAFAIGISFLFALACVALAILSMRL FT RRMRKKMHKIALHNEALVDRNWELKEAEERARHLFESQSDLIVLRDGGGVITSVNEAYCILAQRSRTELLGSRFALPVLE FT QGESAIESNGTRVYDQRVETARGPRWIAWREALMRIDADHPAELQCVGRDVTDRTDSERALAEARDRANEASQAKSRFLA FT MTSHEFRTPLNGIIGMSGLLLETLLTPEQTTYVKAVKASGDALLSLIEDLLDYSRIEAGKVELECRPFVLSDLIEDITEL FT LAPRAQARQLEIASYVDETLPAEVIGDAARLRQVLLNLAGNAIKFTSSGGVALIVVPGIRPGDIRFMVRDTGIGIAPDAQ FT ARIFREFEQADDQIIRSYGGSGLGLSISDRIVKRMGGRITLQSKPDSGSTFEVLVPLPAQDRAPERKRFTAPDLTGQPVM FT LVAPQAIETSLLARRLERWGAEICTASDLTVARALLPERAWHAVVVDHAMGGGAIWRFGQAARQHTERRIIMVTPSTRHD FT LQVAGAAAFTGYLVKPLRTASIAARLSAPADDPTSLRTAGGQPDCGRPETSRTPASTSGPSLSILIAEDNEINALLTRSL FT LTRLGHAVTVATNGEEALKSWDAALAAGAPYDLVLMDVQMPHLDGIEATRKIRERESVRSGRRTTILALTANALIDDRHA FT CFEAGMDGFLVKPLDRERLADALAGLTAARHVPA*" FT sig_peptide 140139..140294 FT /colour=11 FT /locus_tag="Nwi_0119" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.999) with cleavage site probability FT 0.633 atresidue 52" FT gene 140139..142403 FT /locus_tag="Nwi_0119" FT /colour=15 FT misc_feature join(140208..140276,140304..140372,141198..141266) FT /colour=11 FT /locus_tag="Nwi_0119" FT /note="3 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(142490..143446) FT /locus_tag="Nwi_0120" FT /EC_number="2.7.1.33" FT /product="pantothenate kinase" FT /note="TIGRFAM: Bacterial pantothenate kinase: (2.4e-135)" FT /note="PFAM: Phosphoribulokinase/uridine kinase: FT (1.5e-05)" FT /note="SPTR top hit: 'Q6ND01 Pantothenate kinase (EC FT 2.7.1.33) (Pantothenic acid kinase). Rhodopseudomonas FT palustris., evalue=1e-147, 81% identity hit'" FT /note="KEGG top hit: 'rpa:RPA0315 coaA EC=2.7.1.33 FT category=Metabolism; Metabolism of Cofactors and Vitamins; FT Pantothenate and CoA biosynthesis [PATH:rpa00770] , FT evalue=1e-147, 81.446541% identity hit'" FT /note="COGs: 'evalue=4e-94 score=338 category=H FT group=COG1072 Panthothenate kinase'" FT /note="InterPro IPR004566:IPR006083" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=12 FT /translation="MDSRADQQQYNPYRVFPRAEWAKLRHDMPMTLAANEIAALRSMHDRLDLVEVEEIYLPLSRLLSIYVAAMQRLFVAQRQF FT LGIHDRKVPYIIGVAGSVAVGKSTTARVLQALLARWSPRPKVELVTTDGFLLPNAVLERRGLMQKKGFPESYDLPMLLSF FT LSDIKAGRAPVRAPVYSHLTYDIVPDSWIEVSHPDILIVEGVNVLQTGPLPRDGRAIPVVSDFFDFSVYLDAEEPVLRDW FT YVTRFLALRDSAFQDPRSYFNRYALLSDDEAIATAIAIWERTNRANLEDNILPTRPRANLILKKGADHVVERVALRRL* FT " FT gene complement(142490..143446) FT /locus_tag="Nwi_0120" FT /colour=12 FT CDS complement(143665..144015) FT /locus_tag="Nwi_0121" FT /EC_number="3.6.1.31" FT /product="phosphoribosyl-ATP pyrophosphohydrolase" FT /note="PFAM: Phosphoribosyl-ATP pyrophosphohydrolase: FT (9.6e-29)" FT /note="SPTR top hit: 'P60538 Phosphoribosyl-ATP FT pyrophosphatase 1 (EC 3.6.1.31) (PRA-PH 1). FT Rhodopseudomonas palustris., evalue=3e-39, 72% identity FT hit'" FT /note="KEGG top hit: 'rpa:RPA0314 hisE1 EC=3.6.1.31 FT category=Metabolism; Amino Acid Metabolism; Histidine FT metabolism [PATH:rpa00340] , evalue=2e-39, 72.897196% FT identity hit'" FT /note="COGs: 'evalue=4e-19 score=86.7 category=E FT group=COG0140 Phosphoribosyl-ATP pyrophosphohydrolase'" FT /note="InterPro IPR008178:IPR008179" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=10 FT /translation="MRERTSRRIMQRFTIHDLAAIIDARAASGGDASYTRKLLDKGPAHCARKLGEEAVETIIAAVEKDRHHLIAEGADLMFHF FT LVLLKASGVTLQDVEAVLAQRTAISGLEEKAARNRD*" FT gene complement(143665..144015) FT /locus_tag="Nwi_0121" FT /colour=10 FT CDS complement(144067..144843) FT /locus_tag="Nwi_0122" FT /EC_number="5.3.1.16" FT /product="Histidine biosynthesis protein HisF" FT /note="TIGRFAM: Histidine biosynthesis protein HisF: FT (3.5e-149)" FT /note="PFAM: Histidine biosynthesis: (4.9e-139)" FT /note="SPTR top hit: 'Q89WM4 Imidazole glycerol phosphate FT synthase subunit hisF (EC 4.1.3.-) (IGP synthase cyclase FT subunit) (IGP synthase subunit hisF) (ImGP synthase FT subunit hisF) (IGPS subunit hisF). Bradyrhizobium FT japonicum., evalue=1e-131, 90% identity hit'" FT /note="KEGG top hit: 'bja:blr0654 hisF EC=4.1.3.- FT category=Metabolism; Amino Acid Metabolism; Histidine FT metabolism [PATH:bja00340] , evalue=1e-131, 90.661479% FT identity hit'" FT /note="COGs: 'evalue=1.0e-111 score=393 category=E FT group=COG0107 Imidazoleglycerol-phosphate synthase'" FT /note="InterPro IPR003009:IPR004651:IPR006062" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=10 FT /translation="MFKVRVIPCLDVKDGRVVKGVNFVDLRDAGDPVEAAIAYDAAGADELTFLDITATHENRGIMLDVVRRTAEACFMPVTVG FT GGVRTIEDIRTLLRSGADKVSINSAAVSRREFVKEASEKFGDQCIVVAIDAKRVSRTGGTDRWEIFTHGGRRSTGIDAIE FT YAQEVASLGAGEILLTSMDRDGTRQGFDLPLTRRVADSVPVPVIASGGVGNLDHLVDGIREGHATAVLAASIFHFGEFTI FT RQAKEHMVRAGLAMRLDP*" FT gene complement(144067..144843) FT /locus_tag="Nwi_0122" FT /colour=10 FT CDS complement(144859..145608) FT /locus_tag="Nwi_0123" FT /EC_number="5.3.1.16" FT /product="phosphoribosylformimino-5-aminoimidazole FT carboxamide ribotide isomerase" FT /note="TIGRFAM: Phosphoribosylformimino-5-aminoimidazole FT carboxamide ribotide isomerase: (8.8e-111)" FT /note="PFAM: Histidine biosynthesis: (1.6e-110)" FT /note="SPTR top hit: 'Q89WM5 1-(5-phosphoribosyl)-5-[(5- FT phosphoribosylamino)methylideneamino] FT imidazole-4-carboxamide isomerase (EC 5.3.1.16) FT (Phosphoribosylformimino-5-aminoimidazole carboxamide FT ribotide isomerase). Bradyrhizobium japonicum-TRUNCATED-, FT evalue=1e-112, 84% identity hit'" FT /note="KEGG top hit: 'bja:blr0653 hisA EC=5.3.1.16 FT category=Metabolism; Amino Acid Metabolism; Histidine FT metabolism [PATH:bja00340] , evalue=1e-112, 84.274194% FT identity hit'" FT /note="COGs: 'evalue=9e-78 score=283 category=E FT group=COG0106 Phosphoribosylformimino-5-aminoimidazole FT carboxamide ribonucleotide (ProFAR) isomerase'" FT /note="InterPro IPR003009:IPR006062:IPR006063" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=10 FT /translation="METVILFPAIDLKSGQCVRLEQGDMARATVFNLDPVEQARAFAAQGFEYLHVVDLDGAFAGKPVNADAVERVLRNVALPM FT QLGGGIRDLKTVEAWLGKGVARVIIGTAAVRDPVLVREAAKAFPGRVAVGLDARDGKVAVEGWAETSEVTALDIARRFED FT AGIAAIIFTDIARDGLLKGLNLDATIALADSISIPVIASGGFASIADVKALLEPRAKKLAGAISGRALYDGRLDPVEALK FT LIHAARAAA*" FT gene complement(144859..145608) FT /locus_tag="Nwi_0123" FT /colour=10 FT CDS complement(145596..146246) FT /locus_tag="Nwi_0124" FT /product="imidazole glycerol phosphate synthase, glutamine FT amidotransferase subunit" FT /note="TIGRFAM: Imidazole glycerol phosphate synthase, FT glutamine amidotransferase subunit: (8.7e-79)" FT /note="PFAM: Glutamine amidotransferase class-I: FT (1.6e-40)" FT /note="SPTR top hit: 'P60601 Imidazole glycerol phosphate FT synthase subunit hisH (EC 2.4.2.-) (IGP synthase glutamine FT amidotransferase subunit) (IGP synthase subunit hisH) FT (ImGP synthase subunit hisH) (IGPS subunit hisH). FT Rhodopseudomonas palustris-TRUNCATED-, evalue=1e-102, 82% FT identity hit'" FT /note="KEGG top hit: 'rpa:RPA0311 hisH EC=2.4.2.- FT category=Metabolism; Amino Acid Metabolism; Histidine FT metabolism [PATH:rpa00340] , evalue=1e-102, 82.870370% FT identity hit'" FT /note="COGs: 'evalue=9e-72 score=263 category=E FT group=COG0118 Glutamine amidotransferase'" FT /note="InterPro IPR000991:IPR010139:IPR011702" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=10 FT /translation="VTAAIIDYGSGNLHSAAKALECAARGMEGLQRIVVTRDPDVVFRADRVVLPGVGAFADCRRGLDALDGMVQALTEVVRDK FT ARPFLGICVGMQLMATRGKEHVTTDGLGWIAGDVERISPRDESLKIPHMGWNTLDPAREHPVLEGLPLGPKGRHAYFVHS FT YHLNAANETDVLARADYGGPVTAIVGKDTAIGTQFHPEKSQRFGLALIANFLRWKP* FT " FT gene complement(145596..146246) FT /locus_tag="Nwi_0124" FT /colour=10 FT CDS complement(146243..146791) FT /locus_tag="Nwi_0125" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q89WM7 Blr0651 protein. FT Bradyrhizobium japonicum., evalue=6e-48, 55% identity FT hit'" FT /note="KEGG top hit: 'bja:blr0651 category=Unassigned, FT evalue=4e-48, 55.932203% identity hit'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="VLLSAESAMSVYTVHAPPADGPDGRGATDNFVFVRDGFSFGAFVLGPIWLLYRRLWLVLAGYLVLSIAMEVVMTLLRVGA FT GTRVAAMAVVAVLMGLEAASLRRWTLSRRKWRPLDVVVADDQEAAERRFFDRWQAMRSADYDPLAIDRGAPPPTRGGPDT FT SLPPSLPRGDIVGLFPQPGFRR*" FT gene complement(146243..146791) FT /locus_tag="Nwi_0125" FT /colour=13 FT misc_feature complement(join(146489..146539,146552..146617,146639..146695)) FT /colour=11 FT /locus_tag="Nwi_0125" FT /note="3 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(146794..147387) FT /locus_tag="Nwi_0126" FT /EC_number="4.2.1.19" FT /product="imidazoleglycerol-phosphate dehydratase" FT /note="PFAM: Imidazoleglycerol-phosphate dehydratase: FT (3.9e-96)" FT /note="SPTR top hit: 'Q89WM8 Imidazoleglycerol-phosphate FT dehydratase (EC 4.2.1.19) (IGPD). Bradyrhizobium FT japonicum., evalue=5e-97, 87% identity hit'" FT /note="KEGG top hit: 'bja:blr0650 hisB EC=4.2.1.19 FT category=Metabolism; Amino Acid Metabolism; Histidine FT metabolism [PATH:bja00340] , evalue=3e-97, 87.817259% FT identity hit'" FT /note="COGs: 'evalue=2e-80 score=291 category=E FT group=COG0131 Imidazoleglycerol-phosphate dehydratase'" FT /note="InterPro IPR000807" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=10 FT /translation="MRTASIKRKTKETDIEVAVNLDGSGVSEVATGIGFFDHMLDLLARHSRIDITVRADGDLHVDHHHTTEDVGIALGQAVKQ FT ALGSMVGISRYASVYMPMDETLSRVVIDISGRPVLVFKVGFPRDKIGEFDTELVREWFNAFAVNAGVTLHVETLYGENSH FT HIAESCFKGLARALRAAVAIDPRAANEVPSTKGQLGG*" FT gene complement(146794..147387) FT /locus_tag="Nwi_0126" FT /colour=10 FT CDS 147685..148239 FT /locus_tag="Nwi_0127" FT /product="20S proteasome, A and B subunits" FT /note="PFAM: 20S proteasome, A and B subunits: (1.4e-35)" FT /note="SPTR top hit: 'Q89WM9 ATP-dependent protease hslV FT (EC 3.4.25.-). Bradyrhizobium japonicum., evalue=4e-89, FT 91% identity hit'" FT /note="KEGG top hit: 'bja:bll0649 hslV EC=3.4.25.- FT category=Unassigned, evalue=2e-89, 91.304348% identity FT hit'" FT /note="COGs: 'evalue=5e-73 score=267 category=O FT group=COG5405 ATP-dependent protease HslVU (ClpYQ) FT peptidase subunit'" FT /note="InterPro IPR001353" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MQASQPETWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKSNAKKVRKLGKGDVIGGFAGATADAFTLFERLESKLEQYPG FT QLTRAAVELAKDWRTDRYLRRLEAMMLVADKDVSLVLTGTGDVLEPESGVMAIGSGGNYALAAARALIDSDKDAETIVRS FT ALDIAADICVYTNRNLTIEALAAS*" FT gene 147685..148239 FT /locus_tag="Nwi_0127" FT /colour=9 FT CDS 148243..148722 FT /locus_tag="Nwi_0128" FT /EC_number="2.3.1.82" FT /product="GCN5-related N-acetyltransferase" FT /note="PFAM: GCN5-related N-acetyltransferase: (1.7e-05)" FT /note="SPTR top hit: 'Q89WN0 Bll0648 protein. FT Bradyrhizobium japonicum., evalue=2e-62, 71% identity FT hit'" FT /note="KEGG top hit: 'bja:bll0648 EC=2.3.1.82 FT category=Unassigned, evalue=1e-62, 71.153846% identity FT hit'" FT /note="COGs: 'evalue=3e-08 score=51.5 category=J FT group=COG1670 Acetyltransferases including N-acetylases of FT ribosomal proteins'" FT /note="InterPro IPR000182" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MAYGFRPMTAADLPTIRRWLDTPHVAEWWGDPAEQFELVSGDLDHPDMAQFIVTDGGRDFAYLQCYRLSDWHTGLGEQPD FT GTRGLDQFIGEAGMIGRGHGSAFIRSFADRLLIKGVPRIVIDPDPDNARAIRAYEKAGFHRDRLAATPDGPALLMIRDA* FT " FT gene 148243..148722 FT /locus_tag="Nwi_0128" FT /colour=11 FT CDS 148795..150096 FT /locus_tag="Nwi_0129" FT /product="Heat shock protein HslU" FT /note="TIGRFAM: Heat shock protein HslU: (1.2e-246)" FT /note="PFAM: AAA ATPase, central region: (5.7e-08) Heat FT shock protein HslU: (6.4e-53)" FT /note="SMART: ATPase (1.5e-13)" FT /note="SPTR top hit: 'Q89WN2 ATP-dependent hsl protease FT ATP-binding subunit hslU. Bradyrhizobium japonicum., FT evalue=0.0, 90% identity hit'" FT /note="KEGG top hit: 'bja:bll0646 hslU FT category=Unassigned, evalue=0.0, 90.322581% identity hit'" FT /note="COGs: 'evalue=0.0 score=662 category=O FT group=COG1220 ATP-dependent protease HslVU (ClpYQ) ATPase FT subunit'" FT /note="InterPro IPR003593:IPR003959:IPR004491" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MTDISPREIVSELDRFIVGQADAKRAVSIALRNRWRRQQLTGPLREEVLPKNILMIGPTGVGKTEIARRLAKLANAPFLK FT IEATKFTEVGYVGRDVEQIVRDIVEVAINQTRERKRKDVQARAQLAAEERVLDALVGANASAATRDSFRKRLRSGELNDK FT EIEIETQTSGGGPMFEIPGMPGAQVGAISIGDIFGKMGGRTKTRRLTVSDSYEILINEESDKLLDSDQLTQEAIAAVENN FT GIVFLDEIDKICVRDGRSGGDVSREGVQRDLLPLIEGTTVSTKHGAVKTDHILFIASGAFHIAKPSDLLPELQGRLPIRV FT ELDALTRDDLRRILTEPEASLIKQYVALMDTEGVVLDFTDDAVDALADIAVAVNSTVENIGARRLQTVMERVLDDISFTA FT PDRNGETVRIDAGYVQKNIGDLAKNADLSRFIL*" FT gene 148795..150096 FT /locus_tag="Nwi_0129" FT /colour=9 FT CDS 150408..151742 FT /locus_tag="Nwi_0130" FT /product="polyhydroxyalkanoate depolymerase" FT /note="TIGRFAM: Polyhydroxyalkanoate depolymerase: FT (8.6e-262)" FT /note="PFAM: PHB de-polymerase, C-terminal: (1.6e-160)" FT /note="SPTR top hit: 'Q89VY7 Blr0908 protein. FT Bradyrhizobium japonicum., evalue=0.0, 81% identity hit'" FT /note="KEGG top hit: 'bja:blr0908 category=Unassigned, FT evalue=0.0, 81.081081% identity hit'" FT /note="COGs: 'evalue=1.0e-176 score=611 category=I FT group=COG4553 Poly-beta-hydroxyalkanoate depolymerase'" FT /note="InterPro IPR009656:IPR010915" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=5 FT /translation="MPIGEFGRPPELPAEVSPTMTAPMYWMYEMAQASLNPARAITDATRMLFQNPLNPWAHTQLGKSVAAGCELFERTTRRYG FT KPEWGLHETKVNGVRTPIEIRSVWEKPFCRLLYFDRMHPRPLRTPQPRLLLVAPMSGHYATLLRGTVEAFMPTHDVYITD FT WSDARMVPVAEGRFDLDDFVDYLIEILHMLGGNVHVIAVCQPSVPVLAAVSAMEAARDPYVPLSMTLMGGPIDTRKNPTA FT VNNLAAERGTDWFRNNVITKVPFPHPGVMRDVYPGFLQLNGFISMNFDRHMNAHKSLFEHLVKGDGDLADKHRDFYDEYL FT AVMDLTAEYYLQTVDQVFVKHALPKGEMTHRGRLVDPSKIKRVALMTVEGEKDDISGLGQTEAAHALCTSIPDNRRTHYV FT QSGVGHYGVFNGSRFRSEIVPRMNDFMQSNAGPPEKASRASAAE*" FT gene 150408..151742 FT /locus_tag="Nwi_0130" FT /colour=5 FT CDS 151952..152788 FT /locus_tag="Nwi_0131" FT /product="Protein of unknown function DUF45" FT /note="PFAM: Protein of unknown function DUF45: (2.6e-16)" FT /note="SPTR top hit: 'Q89VY6 Blr0909 protein. FT Bradyrhizobium japonicum., evalue=1e-134, 81% identity FT hit'" FT /note="KEGG top hit: 'bja:blr0909 category=Unassigned, FT evalue=1e-134, 81.720430% identity hit'" FT /note="COGs: 'evalue=6e-40 score=157 category=R FT group=COG1451 metal-dependent hydrolase'" FT /note="InterPro IPR002725:IPR006025" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MICFCAERFEWRRIWQNPGGISPSGFADMARALLYRRPAEPSRLLIKHGSQIYSVRLRRHRRARRYTLRIHPSDREAILT FT MPPRGTLAEAKDFAQRHGGWIAARLGRLPKAAPFQHGAVIPLRGVAHRIVHRAGERGTVWTETRDSGERILCVAGGLEYL FT DRRVHDFLKREARQDLQKASQRYADALGVKVRRISIRDQSSRWGSCTSAGSLSFSWRLILAPPFVLDYLAAHEVAHLVEM FT NHSPRFWKVVARVCKHVERAKKWLDVEGNDLHRYGIQD*" FT gene 151952..152788 FT /locus_tag="Nwi_0131" FT /colour=11 FT CDS complement(152996..155200) FT /locus_tag="Nwi_0132" FT /EC_number="2.4.1.129" FT /product="Penicillin-binding protein 1A" FT /note="TIGRFAM: Penicillin-binding protein 1A: (1.4e-244)" FT /note="PFAM: Glycosyl transferase, family 51: (1.3e-85) FT Penicillin-binding protein, transpeptidase: (5.1e-50)" FT /note="SPTR top hit: 'Q89VY5 Penicillin-binding protein. FT Bradyrhizobium japonicum., evalue=0.0, 72% identity hit'" FT /note="KEGG top hit: 'bja:bll0910 pbpC FT category=Unassigned, evalue=0.0, 72.567568% identity hit'" FT /note="COGs: 'evalue=1.0e-167 score=581 category=M FT group=COG0744 Membrane carboxypeptidase FT (penicillin-binding protein)'" FT /note="InterPro IPR001264:IPR001460:IPR011816" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MALGQKKRSGRKEPVFSGFAASLTELRLNPLDRVTIADDKPARRTPPRKKATAPRSEAPRKPPGGRKGQAKKRKRAGLSR FT LFYWSAVVALWSVIAVVGVLIYVGAHLPPIQSLEIPKRPPTIQIVAADGSVLATRGEMAGSNVALKELPSYLPNAFIAIE FT DRRFHSHYGVDPLGILRAAVANVLHRGVSQGGSTLTQQLAKNLFLTQERTLERKLQEVELALWLERKHTKAQILELYLNR FT VYFGSGAYGIEAAAQKYFGKPAKNVTLAEAAMLAGLVKSPSRLAPDRNPEGAEARAKIVLAAMADAHLITGQQARAATAK FT PSYAMKPASAGTANYVADWVGEVLDDLVGQVDQNIIVETTIDPKLQSAAEAALIDELAAKSIKFNVSQGALVAMTPDGAI FT RAMVGGRNYADSQFNRATMAKRQPGSAFKPFVYLAAIEAGLTPETIRQDAPLDIKGWRPENYTHEYFGAVTLTQALAMSL FT NTVAVRLGLEVGAGKVVRTAHRLGITSKLEPNASIALGTSEVSPLELVGAFAPFANGGYAAGPHVVERVRTAGNNKLLYA FT RGKERPDRVIDPRAVAMMNTMMEQTLINGTARKAEIPGWTAAGKTGTSQDFRDAWFIGYTARLVTGVWLGNDDNTPTRKA FT TGGSLPVEVWSRFMRAAHQGVRPEPIPGTQRSGFPPEVAQFGQPADAPVRAASPTLGRSPPPPIPQPARADARPQPASGL FT GLDGWLNDRLFGGR*" FT gene complement(152996..155200) FT /locus_tag="Nwi_0132" FT /colour=9 FT misc_feature complement(154892..154957) FT /colour=11 FT /locus_tag="Nwi_0132" FT /note="1 probable transmembrane helix predicted FT byTMHMM2.0" FT CDS complement(155426..158203) FT /locus_tag="Nwi_0133" FT /EC_number="2.7.7.59" FT /product="Protein-P-II uridylyltransferase" FT /note="TIGRFAM: Protein-P-II uridylyltransferase: (0)" FT /note="PFAM: Amino acid-binding ACT: (1.3e-08) FT Metal-dependent phosphohydrolase, HD subdomain: (2.7e-10)" FT /note="SMART: Metal-dependent phosphohydrolase, HD region: FT (3.8e-07)" FT /note="SPTR top hit: 'Q89VX9 [Protein-PII] FT uridylyltransferase (EC 2.7.7.59) (PII uridylyl- FT transferase) (Uridylyl removing enzyme) (UTase). FT Bradyrhizobium japonicum., evalue=0.0, 81% identity hit'" FT /note="KEGG top hit: 'bja:bll0916 glnD EC=2.7.7.59 FT category=Unassigned, evalue=0.0, 81.561822% identity hit'" FT /note="COGs: 'evalue=0.0 score=857 category=O FT group=COG2844 UTP:GlnB (protein PII) uridylyltransferase' FT " FT /note="InterPro IPR002912:IPR003607:IPR006674:IPR010043" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MVLPTTKDATAAGAGFDTVRIIGDIDALAEKHAGHEDVFRSAVSRLLKAELAKVRDAAQAKLLRDRHGRHCAEWLCFVQD FT EIIRLSFSAATRHLYHSPIPSDGERMAVVATGGYGRGLMAPESDIDLLFILPYKQTAWGEQVAEAILYCLWDMGLNVGHA FT TRSVNESIRQARRDMTVRTGILEARFLTGDRALYDELISRFDTEVVQGTAAEFVAAKLAEREERHHRAGQSRYLVEPNVK FT DGKGGLRDLHTLFWIAKYVYRVRESHELLRRNVFDVREYRTFRRCADFLWSVRCNLHFATGRAEERLSFDLQREIAVRLG FT YTSHPGMQDVERFMKHYFLTAKDVGDLTAILCAKLEDQQAKPAPVLSRAMSKPPGAEVRRVPDSDDFIIDNNRINLAAPD FT LFKRDPVNLIRLFRLAQKNNLAFHPDALRMVRRSRRLINAQLREDPESNRLFIEILTSNDAETVLRRMNETGVLGEFIRA FT FGKIVSMMQFNMYHHYTVDEHLIRCIGILQDIERGDNDEVALAGELMRTINPEHRPVIYIATLLHDVAKGRPEDHSIAGA FT RVARRLCPRLGFNAADTELVAWLIEQHLTMSKVAQSRDLSDRKTIENFAAVVQSVERMKLLTILTTADIRGVGPGVWNGW FT KAQLLRTLYYETEPVLTGGFSEVNRAQRMAAAEAEFRAAFTEWSGHELNAYIARHYPAYWLKVDLEHKIRHARFLRASEQ FT SGRKLNINVGFDEARGVTELTILAADHPWLLSIIAGACASAGANIVDAQIYTTTDGQALDTIAISREYERDEDEGRRAAR FT IAEIIEQVLEGRLRLPDVMPSRAAGKRLRPFVVEPKVTINNQWSDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHV FT ATFGERARDVFYVTDLLGARITAPTRQAAIKRALVHLLASGNTAE*" FT gene complement(155426..158203) FT /locus_tag="Nwi_0133" FT /colour=9 FT CDS 158519..159523 FT /locus_tag="Nwi_0134" FT /product="Hsp33 protein" FT /note="PFAM: Hsp33 protein: (3.8e-97)" FT /note="SPTR top hit: 'Q6N0J1 Possible heat shock protein FT HSP33. Rhodopseudomonas palustris., evalue=1e-149, 79% FT identity hit'" FT /note="KEGG top hit: 'rpa:RPA4771 category=Unassigned, FT evalue=1e-149, 79.041916% identity hit'" FT /note="COGs: 'evalue=4e-73 score=268 category=O FT group=COG1281 Disulfide bond chaperones of the HSP33 FT family'" FT /note="InterPro IPR000397" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MTSQTSDPAALREPSVRAPSSVPVDDAVIPFEVGALDLRGRLTRLGPALDELLARHDYPAPVAKLLGEAIVLTTLLGSSL FT KFEGRFILQTQTDGPVSFLIVDFRAPARLRAYARFDEARLGDASDAGALLGRGHLAMTIDQGPDMSRYQGLVALEGGSLE FT DAAHEYFLRSEQIPTRVRLAVGEEWRRDGSGPKRGWRGGGMLLQFLPKAPERARQADLPPGDAPDGEAVHTVADDDAWVE FT GQSLIGTVEDLELIDPDLSGERLLYRLFHERGVMVFSSQALHARCSCSRDAVEAMLKSFALEDRSGMVQDGKVAVTCEFC FT NSVYEFTPREAGVE*" FT gene 158519..159523 FT /locus_tag="Nwi_0134" FT /colour=9 FT CDS complement(159648..160361) FT /locus_tag="Nwi_0135" FT /product="Protein of unknown function DUF525" FT /note="PFAM: Protein of unknown function DUF525: FT (1.6e-60)" FT /note="SPTR top hit: 'Q89VE6 Protein apaG. Bradyrhizobium FT japonicum., evalue=2e-57, 81% identity hit'" FT /note="KEGG top hit: 'bja:bll1101 apaG FT category=Unassigned, evalue=3e-58, 81.818182% identity FT hit'" FT /note="COGs: 'evalue=7e-41 score=160 category=P FT group=COG2967 Uncharacterized protein affecting Mg2+/Co2+ FT transport'" FT /note="InterPro IPR007474" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MESEARPYNLDLTRFLHANRSPAPRKRYSSDKKAILSPRSSCGTGLAHDHGRSGAGSCASFGYDRPDTIAFSSEVDTGSR FT EENVFNQDLRASLLIPSEAKGSREFAMYRAVTRHIEVTVEPNFMPERSSAERGHFFWSYTVVITNAGPDTVQLRTRHWII FT TDASGRKQEVRGEGVVGEQPVLAPGERFEYTSGVPLPTATGFMSGRYQMISIRSGEPFEIDVPTFSLDSPDSKRVLN* FT " FT gene complement(159648..160361) FT /locus_tag="Nwi_0135" FT /colour=9 FT CDS 160453..161700 FT /locus_tag="Nwi_0136" FT /product="acyltransferase 3" FT /note="PFAM: Acyltransferase 3: (0.0026)" FT /note="SPTR top hit: 'Q89VE5 Blr1102 protein. FT Bradyrhizobium japonicum., evalue=1e-170, 71% identity FT hit'" FT /note="KEGG top hit: 'bja:blr1102 category=Unassigned, FT evalue=1e-170, 71.912833% identity hit'" FT /note="COGs: 'evalue=3e-45 score=176 category=S FT group=COG4645 Uncharacterized protein conserved in FT bacteria'" FT /note="InterPro IPR002656" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MPPVIDQVVGVRTKASPASVKRDAPVVLIPTPPRERELRLDLLRGFALWLIFIDHLPQNLLTWLTIRNYGFSDATEIFIF FT ISGYTAALVYGRAMRERGFIVAAARILRRVWQIYVAHIVLFTIFLAEISYVASSSENPLYTEEMGILDFLKQPDVTIVQA FT LLLKFRPVNMDVLPLYVALMLFFPLVLLVMQRSAGLALALSAGLYGLTWCFGLALPAYPNGVWFFNPFAWQLLFVFGAWC FT ALGGAKRMSRILSSPATLSICAAYLLFAFYTTLTWHVPRLNHFMPHIAEQWMYPIDKTNLDVLRFMHFVALAALTVRFLP FT KHWPGLASPWLRPLILCGQHSLQIFCIGVFLAFAGQFILAEYSGGAVVHFLISVCGILIMCAAAWVFSWYKGVAGKGGSR FT AKSADGDADLAGGGA*" FT gene 160453..161700 FT /locus_tag="Nwi_0136" FT /colour=13 FT misc_feature join(160657..160725,160780..160848,160966..161019,161038..161106,161116..161184,161203..161271,161473..161532,161551..161619) FT /colour=11 FT /locus_tag="Nwi_0136" FT /note="8 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 161697..162458 FT /locus_tag="Nwi_0137" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q89VE4 Blr1103 protein. FT Bradyrhizobium japonicum., evalue=4e-70, 57% identity FT hit'" FT /note="KEGG top hit: 'bja:blr1103 category=Unassigned, FT evalue=2e-70, 57.657658% identity hit'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MRTGLASALIVLAASSAGVSGCSDQTKNCDVPAYLLTSDSTLSRVASVVKAGGPLNILVVGSRSSTISGAEGEAYPVKLQ FT AALREKLPGIPVNVSVELTPRKTAGDVAPGLGKLVAATRSTLVVWQTGIVDAIRSVDIDEFREAIDEGVTVLRNAGADVV FT LMNMQYSPRTETMVSMNAYIDNMRLVAQQRDVPVFDRFTIMTQWNERGEFDLFSPVHGASLAKRVHSCLGRALSTFLINT FT ARINSAEPEARRQ*" FT sig_peptide 161697..161762 FT /colour=11 FT /locus_tag="Nwi_0137" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.999) with cleavage site probability FT 0.907 atresidue 22" FT gene 161697..162458 FT /locus_tag="Nwi_0137" FT /colour=13 FT CDS 162455..163438 FT /locus_tag="Nwi_0138" FT /product="Lysophospholipase L1 and related esterases" FT /note="PFAM: Lipolytic enzyme, G-D-S-L: (3.6e-06)" FT /note="SPTR top hit: 'Q89VE3 Blr1104 protein. FT Bradyrhizobium japonicum., evalue=1e-105, 62% identity FT hit'" FT /note="KEGG top hit: 'bja:blr1104 category=Unassigned, FT evalue=1e-105, 62.695925% identity hit'" FT /note="COGs: 'evalue=3e-07 score=49.5 category=E FT group=COG2755 Lysophospholipase L1 and related esterases' FT " FT /note="InterPro IPR001087" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MMVNSRIFRTAGPVALALMLAGAAASRAVAQTAPANAAALPGSSAELSASPSLGAATAGTGMPAPGLSGTVADKTAAMAA FT SVRDIFDRVPCLPPKGISQSTGALPHVAAKLAAHKAVVIVAFGSSSTQGHGATSPEFNYPNRLAAQLHRKYPAAAITVLN FT RGKGGEDAPEMIKRLRTEVIDAKPDMVIWQVGTNAVLRDLDPASTVKTVEDGVATIQASGADLVLVDPQYAPAVNARGET FT ADRMIRLLNKVAHHRHVGIFPRFEVMRDWHDRQSLPFDTFVTKDGLHMNDWGYACFAQLLGDDIIRSVDQVQAGVRLQPA FT ATVNRPL*" FT sig_peptide 162455..162547 FT /colour=11 FT /locus_tag="Nwi_0138" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.875 atresidue 31" FT gene 162455..163438 FT /locus_tag="Nwi_0138" FT /colour=13 FT CDS complement(163474..164667) FT /locus_tag="Nwi_0139" FT /EC_number="2.5.1.48" FT /product="O-succinylhomoserine sulfhydrylase" FT /note="TIGRFAM: O-succinylhomoserine sulfhydrylase: FT (4.3e-221)" FT /note="PFAM: Cys/Met metabolism FT pyridoxal-phosphate-dependent enzymes: (5.2e-170)" FT /note="SPTR top hit: 'Q89VE2 O-succinylhomoserine FT sulfhydrylase. Bradyrhizobium japonicum., evalue=0.0, 82% FT identity hit'" FT /note="KEGG top hit: 'bja:bll1105 metZ EC=4.2.99.- FT category=Unassigned, evalue=0.0, 82.994924% identity hit'" FT /note="COGs: 'evalue=1.0e-122 score=432 category=E FT group=COG0626 Cystathionine beta-lyases/cystathionine FT gamma-synthases'" FT /note="InterPro IPR000277:IPR006234" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=10 FT /translation="MSETKSAPRYHPETRLVHSGTLRSQFAETSEALFLTQGYVYDTAEQCEARFKGDDPGFIYSRYSNPTVAMFEQRMAALEG FT AETARALATGMAAVTTAILAPLKAGDHVVAAKALFGSCRYVVEDLLPRYGIESTLVDGLDLDQWRKAMRPNTKTCFIESP FT TNPTLDVLDIGGIAEIAHQAGARLIVDNVFATPIWQSPLALGADVVVYSATKHIDGQGRTLGGVILSSNAFVQEHLQTFI FT RQTGPSISPFNAWILLKGLETLGVRVRQQTDSAAAIAEVLASHPKVSRLVYPGRPDHPQAALVKKQMRAGSTLIGFEVKG FT GKAAAFRCLNALKIARISNNLGDAKSLVTHPATTTHQRLAPEIRAGLGIGESFIRYSVGLEHKDDLIEDLVTALEKA* FT " FT gene complement(163474..164667) FT /locus_tag="Nwi_0139" FT /colour=10 FT CDS 164942..166048 FT /locus_tag="Nwi_0140" FT /EC_number="3.5.4.13" FT /product="2-deoxycytidine 5-triphosphate deaminase" FT /note="PFAM: 2-deoxycytidine 5-triphosphate deaminase: FT (1.5e-283)" FT /note="SPTR top hit: 'Q6N0J7 Hypothetical protein. FT Rhodopseudomonas palustris., evalue=0.0, 89% identity FT hit'" FT /note="KEGG top hit: 'rpa:RPA4765 EC=3.5.4.13 FT category=Metabolism; Nucleotide Metabolism; Pyrimidine FT metabolism [PATH:rpa00240] , evalue=0.0, 89.130435% FT identity hit'" FT /note="COGs: 'evalue=4e-29 score=122 category=F FT group=COG0717 Deoxycytidine deaminase'" FT /note="InterPro IPR010550" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=16 FT /translation="VSFTLPRDANGILPDRMIAAMADAGLILPEYPFVESQIQPASLDLRLGATAYRVRASFLPGPDATVAERIDELKLHEIDL FT SDGAVLETNCVYIVPLLESLALPPEIVAAANPKSSTGRLDVFTRVIADGTRSFDMIGAGYHGPLYAEISPKTFPVLLREG FT SRLSQVRFRSGDAVLDADELDALHASERLVDSDDTDFVNGVALSVDLSGAQAHGFVGYRAKRHTGVIDIDRRGGYAVGEF FT WEPIAARPDASLILDPGEFYILASKEAVQVPPDYAAEMVPFDPLVGEFRVHYAGFFDPGFGYAGAGGEGSRAVLEVRSRE FT VPFILEHGQIVGRLVYEKMLARPDAMYGQRIGSNYQAQGLKLSKHFRL*" FT gene 164942..166048 FT /locus_tag="Nwi_0140" FT /colour=16 FT CDS 166460..166840 FT /locus_tag="Nwi_0141" FT /product="Camphor resistance CrcB protein" FT /note="TIGRFAM: Camphor resistance CrcB protein: FT (9.2e-26)" FT /note="PFAM: Camphor resistance CrcB protein: (4.8e-35)" FT /note="SPTR top hit: 'Q92QE1 Protein crcB homolog. FT Rhizobium meliloti (Sinorhizobium meliloti)., FT evalue=2e-28, 52% identity hit'" FT /note="KEGG top hit: 'sme:SMc01274 category=Unassigned, FT evalue=8e-29, 52.066116% identity hit'" FT /note="COGs: 'evalue=3e-21 score=94.1 category=D FT group=COG0239 Integral membrane protein possibly involved FT in chromosome condensation'" FT /note="InterPro IPR003691" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="LKWTFILAVAAGGALGSVARYLVGIGFGKWLGPKFPWGTLFINVTGSLLIGIFAGLFAVRWSLPQAARIFLVVGICGGYT FT TFSTFSLDTFYLIERGEMASAAAYMIGSVVLSVGALIAGIQIVRVI*" FT sig_peptide 166460..166519 FT /colour=11 FT /locus_tag="Nwi_0141" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.965) with cleavage site probability FT 0.551 atresidue 20" FT gene 166460..166840 FT /locus_tag="Nwi_0141" FT /colour=9 FT misc_feature join(166472..166540,166568..166636,166670..166738,166766..166834) FT /colour=11 FT /locus_tag="Nwi_0141" FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT tRNA 167120..167193 FT /locus_tag="Nwi_R0002" FT /gene="tRNA-Gly1" FT /note="anticodon CCC, Cove Score=80.62" FT /product="tRNA_Gly" FT /colour=8 FT CDS 167204..167488 FT /locus_tag="Nwi_0142" FT /product="hypothetical protein" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=0 FT /translation="LRQRNARRGIGGIESRSETAGPTSSGPIHDLADSQPRVLTPLPGNGDRIYLLCFDAFSPREPDSIPLETLPSRQTGFRFLKVQPESAAWRQHWI*" FT gene 167204..167488 FT /locus_tag="Nwi_0142" FT /colour=0 FT CDS 167648..168124 FT /locus_tag="Nwi_0143" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q6N0S2 Hypothetical protein FT precursor. Rhodopseudomonas palustris., evalue=4e-60, 67% FT identity hit'" FT /note="KEGG top hit: 'rpa:RPA4689 category=Unassigned, FT evalue=2e-60, 67.549669% identity hit'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="LISGQMTRIVTGLLAAVFVLGHVAASEAVVRIGEDRGGRIGTYIDKFEAVRSSGQSVIIDGLCASACTIVLGTVPHDRIC FT VTSHAALGFHAAWDLGSNGRTVINSEATHMLYSMYPSAVQRWIKQRGGLTKRMIFLRGRQLADMYRPCYLDAQASSAR* FT " FT sig_peptide 167648..167725 FT /colour=11 FT /locus_tag="Nwi_0143" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.964) with cleavage site probability FT 0.520 atresidue 26" FT gene 167648..168124 FT /locus_tag="Nwi_0143" FT /colour=13 FT CDS 168478..169071 FT /locus_tag="Nwi_0144" FT /product="Electron transport protein SCO1/SenC" FT /note="PFAM: Electron transport protein SCO1/SenC: FT (4.2e-36)" FT /note="SPTR top hit: 'Q89VB6 Blr1131 protein. FT Bradyrhizobium japonicum., evalue=8e-77, 69% identity FT hit'" FT /note="KEGG top hit: 'bja:blr1131 category=Unassigned, FT evalue=4e-77, 69.109948% identity hit'" FT /note="COGs: 'evalue=9e-43 score=166 category=R FT group=COG1999 Uncharacterized protein SCO1/SenC/PrrC FT involved in biogenesis of respiratory and photosynthetic FT systems'" FT /note="InterPro IPR003782" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MSNRFVRPLILVAAFAGSLVVGLTVVMWLLGGLASKPTAASIGGPFQLTDQTGQTVTEKDMVGRPTIVFFGYTHCPDVCP FT TSLFEMSEVLRAMGPDADRVNAYFITVDPERDTQETMKSYLSSFDPRLKGLTGDPAAVEKALSGFRVYAKKIPLKDGGYS FT MDHTALIYLMDRDGRFVSSFDLKRSAEAAAADLRRYL*" FT sig_peptide 168478..168582 FT /colour=11 FT /locus_tag="Nwi_0144" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.965) with cleavage site probability FT 0.311 atresidue 35" FT gene 168478..169071 FT /locus_tag="Nwi_0144" FT /colour=11 FT misc_feature 168502..168570 FT /colour=11 FT /locus_tag="Nwi_0144" FT /note="1 probable transmembrane helix predicted FT byTMHMM2.0" FT CDS complement(169062..169712) FT /locus_tag="Nwi_0145" FT /product="possible glycosyl transferases" FT /note="SPTR top hit: 'Q6N0S4 Possible Glycosyl FT transferases. Rhodopseudomonas palustris., evalue=3e-62, FT 52% identity hit'" FT /note="KEGG top hit: 'rpa:RPA4687 category=Unassigned, FT evalue=2e-62, 52.914798% identity hit'" FT /note="COGs: 'evalue=6e-14 score=71.1 category=M FT group=COG1215 Glycosyltransferases probably involved in FT cell wall biogenesis'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="VGGWDAYNVTEDADLGFRLARFGYRSTTFASTTFEEAPARFGGWLRQRSRWMKGWMQTWSVHMRRPRQLWKDAGAKGFLT FT LNAIIGGNVLTALTFPILMIDMALRSLEGAGGGFAAGAVTPLHLTTIAAGFVSTIVVGLMGLARRGQLRQGWILALTPIY FT WACLSIAAWRALYQLLSEPYRWEKTEHGLSPQIRSAATSQGTASHHMAARRRQRYR* FT " FT gene complement(169062..169712) FT /locus_tag="Nwi_0145" FT /colour=9 FT misc_feature complement(join(169194..169259,169287..169352,169413..169478)) FT /colour=11 FT /locus_tag="Nwi_0145" FT /note="3 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 169807..170268 FT /locus_tag="Nwi_0146" FT /product="hypothetical protein" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=0 FT /translation="MSDTIRLARTDTYEHTISGLLKKRADLFNEAERIRDRMAEIKNDIGALDRVLGTLGYTGDLNAEMPRQKRQVLFGRGELT FT RAILDELRDAPRPLGSREIAQAIVALNGQDARDRRALTDVTKRVSKALRGLTEQGALTHKTGEGRQRLWEIRR* FT " FT gene 169807..170268 FT /locus_tag="Nwi_0146" FT /colour=0 FT CDS complement(171280..172266) FT /locus_tag="Nwi_0147" FT /product="possible transposase" FT /note="SPTR top hit: 'Q7VL65 Possible transposase. FT Haemophilus ducreyi., evalue=1e-58, 39% identity hit'" FT /note="KEGG top hit: 'hdu:HD1616 category=Unassigned, FT evalue=8e-59, 39.639640% identity hit'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MRSTENVGLMSQHFLLSAKARTLSLAKVARLSDDEAYDAFRLIRWAATDGAPVCPRCECAAVYTYTTRRLFKCKACSHQF FT SVTSDTIFASRKLPVRDYLLAIAIFVNGAKGHSALQLSRDLDCQYKTAFVMAHKIREALASEAHGAIASGEVEVDGAYFG FT GYVKPANHKGNRRDRRRIINQNGKRRVVVIMRERGGRTLPFVFKSEDASLVKIAQTVAPGSVIHADEATHWDALHARFLT FT KRINHSESYSDGDACTNQAESFFSRMRRAEIGVHHRIAGDYLSAYAGEMAWRENNRRISNGEQYLMVADAALQHPVSRQW FT KGYWQRNS*" FT gene complement(171280..172266) FT /locus_tag="Nwi_0147" FT /colour=11 FT CDS complement(172784..173245) FT /locus_tag="Nwi_0148" FT /product="hypothetical protein" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=0 FT /translation="METLREFITRRHKELDELEAPLRQQLAAIADEREELRRAALAAGPPPMRPANTVTQQADEGRRSRRTIPEKTIKDAVVEV FT LRAKGSGMTALEILAAINLKFGTEYPRTSLSPQLSRLKADGKINRDGIVWTLEKKLIDYVDQPFQRDIEEAFK* FT " FT gene complement(172784..173245) FT /locus_tag="Nwi_0148" FT /colour=0 FT CDS complement(173398..174750) FT /locus_tag="Nwi_0149" FT /product="glycosyl transferase, family 2" FT /note="PFAM: Glycosyl transferase, family 2: (0.0002)" FT /note="SPTR top hit: 'Q6N0S4 Possible Glycosyl FT transferases. Rhodopseudomonas palustris., evalue=1e-115, FT 52% identity hit'" FT /note="KEGG top hit: 'rpa:RPA4687 category=Unassigned, FT evalue=1e-116, 52.954048% identity hit'" FT /note="COGs: 'evalue=4e-19 score=89.6 category=M FT group=COG1215 Glycosyltransferases probably involved in FT cell wall biogenesis'" FT /note="InterPro IPR001173" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="VGNGGRADALRRAAPGGPPRPPGFDGIPASSNDNWLDDPEPGPAIELDCLRHILAPALLRAAEARGREVATGADQALIRS FT GVIGEEAYLQALSFQTGLAIETFAEVSRSDCPLPDRYLSSAAQHGLLPLRSRGKLVWIVAPRGFTARRLCRMVAAYPSLC FT DRILLASRRNLHQFLLRQEAGDVLGRSAAKALHRRFPALSAAPAADDGAHRGLRTMRRLAQTALLSAMMTLTPAIVATDI FT WSSALALWFLAFIGLRLTASLMPPRPVRRPPRLPDHGLPVYTVIAALYREASSVASLLQAIEALDYPREKLDVIIVIELD FT DLETRAALARLGPMPHVQVLLAPAEGPRTKPKALNCALPFARGGFTAVFDAEDRPEPGQLRAALDAFRTQGADIACVQAS FT LCIENQSDSWLSRMFAAEYAGQFDVFLPGLASFGVPLPLGGSSNHFRGIR*" FT gene complement(173398..174750) FT /locus_tag="Nwi_0149" FT /colour=9 FT CDS 174846..175766 FT /locus_tag="Nwi_0150" FT /product="extracellular solute-binding protein, FT family 3" FT /note="PFAM: Bacterial extracellular solute-binding FT protein, family 3: (1.8e-54)" FT /note="SMART: Bacterial extracellular solute-binding FT protein, family 3: (1.1e-52)" FT /note="SPTR top hit: 'Q89VB5 Blr1132 protein. FT Bradyrhizobium japonicum., evalue=1e-134, 76% identity FT hit'" FT /note="KEGG top hit: 'bja:blr1132 category=Unassigned, FT evalue=1e-135, 76.797386% identity hit'" FT /note="COGs: 'evalue=5e-33 score=135 category=T FT group=COG0834 ABC-type amino acid transport/signal FT transduction systems periplasmic component/domain'" FT /note="InterPro IPR001311:IPR001638" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=15 FT /translation="MQPQITVSANERLIRRGAATLGCLLAAGWMLGAWATLDRARAQTTVETATAAPQAVPGFWDPRHRPDRPDLSRLTVIRFL FT TETDYPPFNYTGPDGNPAGFNVDLARTLCEEIKVTCTIQMRRFETLVDALSSNRGDALIASLAVTPELRKRIDFTDPYYR FT TPARFVSRRDAAMAEVRPEYLEGKKVGVVAGSAHEAYLKVFFTDAELHGYPNDETLRQALRQNEVDFIFGDAISLAFWIN FT GTDSESCCAFSGGPFIESRYFGEGIGIAVRKGNDVLRQALNWALFRIWERGRYTDLWLRYFSVSPF* FT " FT gene 174846..175766 FT /locus_tag="Nwi_0150" FT /colour=15 FT CDS 175870..177501 FT /locus_tag="Nwi_0151" FT /EC_number="6.1.1.6" FT /product="lysyl-tRNA synthetase class 1c" FT /note="TIGRFAM: Lysyl-tRNA synthetase (archaeal), class FT 1c: (7.2e-46)" FT /note="PFAM: Lysyl-tRNA synthetase (archaeal), class 1c: FT (1.9e-38)" FT /note="SPTR top hit: 'Q6N0S6 Lysyl tRNA synthetase. FT Rhodopseudomonas palustris., evalue=0.0, 87% identity FT hit'" FT /note="KEGG top hit: 'rpa:RPA4685 lysS EC=6.1.1.6 FT category=Metabolism; Amino Acid Metabolism; Lysine FT biosynthesis [PATH:rpa00300] Genetic Information FT Processing; Translation; Aminoacyl-tRNA biosynthesis FT [PATH:rpa00970] , evalue=0.0, 87.962963% identity hit'" FT /note="COGs: 'evalue=1.0e-150 score=525 category=J FT group=COG1384 Lysyl-tRNA synthetase (class I)'" FT /note="InterPro IPR001412:IPR002904" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=7 FT /translation="MSDLMSAGDLRALAEQSNAWPFEQAKLIVARLKKTPKDEVLFETGYGPSGLPHIGTFGEVARTTMVRHAFRVLTEDKIKT FT RLLAFSDDMDGLRKVPDNVPNKELLARDLGKPLTKVVDPFGTHSSFGEHNNARLRAFLDTFGFDYEFASSTAYYTSGRFD FT VTLLKVLENIDKVMAIMLPSLREERAASYSPFLPICPRTGVVLQVPISAHDAKAGTVSYDDPETKERVTVPVTGGRCKLQ FT WKPDWAMRWTALGVDYEMAGKDLIDSVKLSGKICSALGGTPPEGFNYELFLDDKGQKISKSKGNGLTIDEWLRYASPESL FT SLFMYREPKAAKRLYFDVIPRNVDDYQQFLEGYPRQDARQQLANPVWHIHAGHPPSADMPVTFQLLLTLVSSSNAENAET FT LWGFIGRYRPGVTPQTHPKLDALVGYAINYYRDFVAPTKTFREPTASERAALQDLREALSQLPADASAEDIQNTVYEIGR FT REPFLNHKKPARDGRPGVSLDWFNMLYQVLLGQEKGPRFGSFVAVYGVQNAIAMIDGALARAD* FT " FT gene 175870..177501 FT /locus_tag="Nwi_0151" FT /colour=7 FT CDS 177645..178163 FT /locus_tag="Nwi_0152" FT /product="ErfK/YbiS/YcfS/YnhG" FT /note="PFAM: ErfK/YbiS/YcfS/YnhG: (9e-40)" FT /note="SPTR top hit: 'Q89WV4 Blr0574 protein. FT Bradyrhizobium japonicum., evalue=1e-65, 72% identity FT hit'" FT /note="KEGG top hit: 'bja:blr0574 category=Unassigned, FT evalue=7e-66, 72.093023% identity hit'" FT /note="COGs: 'evalue=2e-26 score=112 category=S FT group=COG1376 Uncharacterized protein conserved in FT bacteria'" FT /note="InterPro IPR005490" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MLTRVAAVLAAIWGAGLLGIGSAEARPEMVGYQGGYAPGTIVVKTSERRLYLIIDSDRALRYPVGVGRAGKQWSGAARIE FT GKYRNPAWAPPAEVKRDNPRIADVIPGGSPANPMGVAAMTLSGGGQYAIHGTNRPGSIGRFVSYGCIRMYNADIDDLYRR FT VSVGTPVVVTQR*" FT sig_peptide 177645..177722 FT /colour=11 FT /locus_tag="Nwi_0152" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.996) with cleavage site probability FT 0.934 atresidue 26" FT gene 177645..178163 FT /locus_tag="Nwi_0152" FT /colour=13 FT CDS 178339..178902 FT /locus_tag="Nwi_0153" FT /EC_number="2.4.2.10" FT /product="Orotate phosphoribosyl transferase" FT /note="TIGRFAM: Orotate phosphoribosyl transferase: FT (8.2e-34)" FT /note="PFAM: Phosphoribosyltransferase: (6.3e-18)" FT /note="SPTR top hit: 'Q89BL4 Orotate FT phosphoribosyltransferase (EC 2.4.2.10) (OPRT) (OPRTase). FT Bradyrhizobium japonicum., evalue=2e-47, 55% identity FT hit'" FT /note="KEGG top hit: 'bja:blr8134 pyrE EC=2.4.2.10 FT category=Metabolism; Nucleotide Metabolism; Pyrimidine FT metabolism [PATH:bja00240] , evalue=8e-48, 55.865922% FT identity hit'" FT /note="COGs: 'evalue=2e-31 score=128 category=F FT group=COG0461 Orotate phosphoribosyltransferase'" FT /note="InterPro IPR000836:IPR004467" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=16 FT /translation="MPEDIKVRQRAFEIIKTRSFGRGNIKLASGKTSTFYFDMKPTMLAPEGAHVLSELILARLAGQGIDYIGGLEMGAVPLIS FT TVSLLSHIRNEPLPGFFVRKDVKKHGTRKLIEGLPVDDLRGKRVVILEDVTTSGASAMIAVSAAQAEGAEVVMVLSIVDR FT GEGAMALYKEKSIEFDSLFKAEEFLAS*" FT gene 178339..178902 FT /locus_tag="Nwi_0153" FT /colour=16 FT CDS complement(178934..179506) FT /locus_tag="Nwi_0154" FT /product="staphylococcus nuclease (SNase-like)" FT /note="PFAM: Staphylococcus nuclease (SNase-like): FT (1.9e-05)" FT /note="SPTR top hit: 'Q6NDS2 Possible Staphylococcal FT nuclease homologues. Rhodopseudomonas palustris., FT evalue=2e-49, 54% identity hit'" FT /note="KEGG top hit: 'rpa:RPA0032 category=Unassigned, FT evalue=1e-49, 54.123711% identity hit'" FT /note="COGs: 'evalue=3e-07 score=48.7 category=L FT group=COG1525 Micrococcal nuclease (thermonuclease) FT homologs'" FT /note="InterPro IPR006021" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MYPYSRINAWSGPRRRNLLSPVLPWIFIVGVAAGAMLPIRSWIDAPRAVNPRTPTEARAIWARAADAAGRHQADVIRTID FT GDTFEALVHLWPGLDMTTRVRLRGIDTAEMKASCAEEFRLAKAASARLRDLLGEGGVTIANIGPDKYQGRVVADAATART FT PDVSAAMLASGLARVYHGGRRESWCNGASR*" FT gene complement(178934..179506) FT /locus_tag="Nwi_0154" FT /colour=11 FT misc_feature complement(179378..179443) FT /colour=11 FT /locus_tag="Nwi_0154" FT /note="1 probable transmembrane helix predicted FT byTMHMM2.0" FT CDS complement(179739..180005) FT /locus_tag="Nwi_0155" FT /product="hypothetical protein" FT /note="SPTR top hit: 'Q89WV0 Bsl0578 protein. FT Bradyrhizobium japonicum., evalue=1e-16, 61% identity FT hit'" FT /note="KEGG top hit: 'bja:bsl0578 category=Unassigned, FT evalue=4e-17, 61.842105% identity hit'" FT /note="COGs: 'evalue=5e-09 score=52.8 category=S FT group=COG5508 Uncharacterized conserved small protein'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=0 FT /translation="VEVIFHAIRSSRRSEDDMIDEPSASSRTGETRSRKQLSPEARRALAEAEARRAAQTDASAPPKEIQGPEGPEPTRFGDWERGGIASDF*" FT gene complement(179739..180005) FT /locus_tag="Nwi_0155" FT /colour=0 FT CDS 180146..181498 FT /locus_tag="Nwi_0156" FT /product="tRNA and rRNA cytosine-C5-methylases" FT /note="PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar FT NOL1/Nop2p: (9.5e-47) NusB/RsmB/TIM44: (6.4e-08)" FT /note="SPTR top hit: 'Q89WU9 SUN protein. Bradyrhizobium FT japonicum., evalue=0.0, 77% identity hit'" FT /note="KEGG top hit: 'bja:blr0579 sun, FMU FT category=Unassigned, evalue=0.0, 77.555556% identity hit'" FT /note="COGs: 'evalue=9e-70 score=258 category=J FT group=COG0144 tRNA and rRNA cytosine-C5-methylases'" FT /note="InterPro IPR000051:IPR001678:IPR006027" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=7 FT /translation="MPSTRFAPPTEAPGLAARRIAADILDGVLHKRRTLDEQLEGPTAHPGLKALADRDRALMRRLVATILRRLGTLGHLLSRL FT LDRGIPTDAPRAQSALLIGAAQILWMDVPDHAAVDLSVRLVQSDRRAAKYAGLVNAVLRRCAREGQSLIEEVRSESLDTP FT SWLMARWSGYYGEGTAKAIAAAISHEPALDLTVKANAAHWATRLHGETLPTGTVRTSLHGSVTMLPGFSEGQWWVQDAAA FT ALPARLFGDLRGRRVIDLCAAPGGKTAQLVQAGAEVTAIDRSPNRVARLRENLGRLSLDARSLVADAIEWQDDVAGDGFD FT GVLVDAPCSATGTIRRHPDVAWLKQDSDIAALTALQQRLLNKAITLLRPGGTLVYCTCSLEPEEGEQVVAALLATDTGIR FT RVPVSADEVAGLADIVTPEGDLRTLPCHLAHDDPTLGGLDGFYAARLTRS*" FT gene 180146..181498 FT /locus_tag="Nwi_0156" FT /colour=7 FT CDS 181625..183379 FT /locus_tag="Nwi_0157" FT /product="heparinase II/III-like" FT /note="PFAM: Heparinase II/III-like: (3.7e-46)" FT /note="SPTR top hit: 'Q89WU8 Blr0580 protein. FT Bradyrhizobium japonicum., evalue=0.0, 77% identity hit'" FT /note="KEGG top hit: 'bja:blr0580 category=Unassigned, FT evalue=0.0, 77.264957% identity hit'" FT /note="COGs: 'evalue=1.0e-129 score=455 category=S FT group=COG5360 Uncharacterized protein conserved in FT bacteria'" FT /note="InterPro IPR012480" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="VSVAHRRRISALVVSRFARRTMARAGDGPAALSRLWPGRADRLTIAPHDLRTADATRAAEIYAGRFVFAGKIVTCHSRSV FT FDLEPPSEDWEAALLGFGWLRHLRAADTAITRANARSLVEDWISNPARRRPACRRADVMSRRVISLLSQAPLVLGEADGK FT FYRRYLRALARDIRLLRFGLHDAPDGVSRLQVVIALCYASLCLANQARTIRSATRKLSEELRRQILPDGGHVSRNPGALI FT ELLIDLLPLRQTFAARNIAPPPALLNAIDRMMPMLRFFRHGDGSFALFNGMSSTPSDLLATLLAYDDTRGIPMASMPHTG FT FQRIDAGATILIVDAGLPPPPNLSEEAHAGCLSFELSSGLNRIVTNCGMSSTGRDTWRVFARSTAAHSTLVCHQTSSCQF FT VEQSAMKRLLQGAPIVSGPAHVESLRETIDGGERLTASHDGYLARFGLIHRRVLTMAHDGSRLEGEDMLEPAPGGRIKGS FT QIRYALRFHLHPSVKATRLDDAHGVMLVLPNREVWTFEATQDRVELEDSVFLAGNDGPRRTVQIVIHQNAREVSRVRWGF FT VRSATSAAATNARRQARREPELPL*" FT gene 181625..183379 FT /locus_tag="Nwi_0157" FT /colour=13 FT CDS 183485..185077 FT /locus_tag="Nwi_0158" FT /EC_number="2.1.2.3" FT /product="AICARFT/IMPCHase bienzyme" FT /note="TIGRFAM: AICARFT/IMPCHase bienzyme: (8.2e-200)" FT /note="PFAM: AICARFT/IMPCHase bienzyme: (1.3e-154) FT MGS-like: (1.8e-60)" FT /note="SPTR top hit: 'Q89WU7 Bifunctional purine FT biosynthesis protein purH [Includes: FT Phosphoribosylaminoimidazolecarboxamide formyltransferase FT (EC 2.1.2.3) (AICAR transformylase); IMP cyclohydrolase FT (EC 3.5.4.10) (Inosinicase) (IMP synthetase) FT (A-TRUNCATED-, evalue=0.0, 85% identity hit'" FT /note="KEGG top hit: 'bja:blr0581 purH EC=2.1.2.3 FT 3.5.4.10 category=Metabolism; Nucleotide Metabolism; FT Purine metabolism [PATH:bja00230] Metabolism; Metabolism FT of Cofactors and Vitamins; One carbon pool by folate FT [PATH:bja00670] , evalue=0.0, 85.471698% identity hit'" FT /note="COGs: 'evalue=0.0 score=717 category=F FT group=COG0138 AICAR transformylase/IMP cyclohydrolase PurH FT (only IMP cyclohydrolase domain in Aful)'" FT /note="InterPro IPR002695:IPR011607" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=16 FT /translation="MTDRPRRVTRALLSVSDKTGLTEFARALADLGVELVSTGGTAKEIAAAGLKVSDVSDLTGFPEMMDGRVKTLHPKVHGGL FT LAIRDNADHAKSMKDHGIAPIDLLVVNLYPFESTVDKGAACEECIENIDIGGPAMIRAAAKNHDDVAVVVEPQDYQAVLD FT ELKANAGATTLSLRKRLAAKAYARTAAYDAAISNWFAVQLETDAPDYRAVGGRLAQRLRYGENPHQTAAFYRTPERRAGV FT ATARQLQGKELSYNNINDTDAAYECVAEFDAARTAACVIIKHANPCGVAEGSSLTEAYRRALACDQTSAYGGIIAFNRTI FT DADAANAVAGIFTEVIIAPDATEEAIAVIGKRKNLRLLLAGGLPDPRARGLTAKTVAGGLLVQGRDNAVIDDMSLKVVTK FT RPPTEAEMRDLRFAFRVAKHVKSNTIVYARDLATVGIGAGQMSRVDSARIAARKAEDAARDLKLAEPLTKGSVVASDAFF FT PFADGMLACIKAGATAVIQPGGSMRDEEVIKAADEHGIAMVFTGVRHFRH*" FT gene 183485..185077 FT /locus_tag="Nwi_0158" FT /colour=16 FT CDS 185184..185954 FT /locus_tag="Nwi_0159" FT /product="cytochrome c, class I" FT /note="PFAM: Cytochrome c, class I: (1.9e-05)" FT /note="SPTR top hit: 'Q7VXZ1 Probable cytochrome C. FT Bordetella pertussis., evalue=6e-40, 43% identity hit'" FT /note="KEGG top hit: 'bpe:BP1580 category=Unassigned, FT evalue=3e-40, 43.203883% identity hit'" FT /note="COGs: 'evalue=3e-14 score=72.7 category=C FT group=COG2863 Cytochrome c553'" FT /note="InterPro IPR003088:IPR008168:IPR008169" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=3 FT /translation="MIPTRRAAPAQSGNRFSDKIMLHQKVKARAFSSRTKRMRSVAGGALLLLGVSSLPALADDGKGITRPPGRATSCTPCHGR FT NGEGQPVRGIPRLAGLNADYFERQLASFKNATRRNRIMLMIASDLSDDESRALASYYAGMSTPKPQTAPADRAVIAAGAE FT LAANGDPSKDLQGCGQCHGADGLGAGADFPRLAGQSALYIEKALRSWKAGDRKNDPGGVMADVANKLTDDQIKSVAAYYE FT SLPIAAAAPAPEANKP*" FT sig_peptide 185184..185360 FT /colour=11 FT /locus_tag="Nwi_0159" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 1.000 atresidue 59" FT gene 185184..185954 FT /locus_tag="Nwi_0159" FT /colour=3 FT CDS complement(186074..187462) FT /locus_tag="Nwi_0160" FT /product="major facilitator superfamily MFS_1" FT /note="PFAM: Major facilitator superfamily MFS_1: FT (6.9e-16)" FT /note="SPTR top hit: 'Q89WU6 Bll0582 protein. FT Bradyrhizobium japonicum., evalue=0.0, 75% identity hit'" FT /note="KEGG top hit: 'bja:bll0582 category=Unassigned, FT evalue=0.0, 75.000000% identity hit'" FT /note="COGs: 'evalue=1e-87 score=317 category=R FT group=COG2270 Permeases of the major facilitator FT superfamily'" FT /note="InterPro IPR007114:IPR011701" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MAVTTALPADGAEPGERYASRTAINSWIMFDWAAQPYFTLITTFVFAPYFATFVAATPAEGQSLWGFATGAAGLVIALAS FT PVLGAIADANGRRKPWIAAFGALLVIGSSLMWIGKPGDPGVILPLLIAYGIATIGVEFATVFNNAMMPSLVPPHRIGRLS FT GTGWATGYVGGILSLILVLGFLAANPATGKTLFGMTPLFGLDPATHEGDRITGPLTGLWFIIFVLPMFLLTPDLPAKRSV FT RMALREGLIGLRGTLRELPQRRSLATFLLANMIYTDGLVSLFAFGGIYAAGTFGWHTIEIGTFGMLLAIAGALGAWIGGK FT LDDRVGPKAVIATSMTVLLLSIIMILMVDKDSILFVSVTPPSPGGGLFAAPAEKAYLILGCLIGGAGGPLQAASRTLLIR FT MAPKERITQFFGLFALTGKVTSFVGPLLIGFITAVTASQKAGMAVLVLFFVAGLALLSRVRD* FT " FT gene complement(186074..187462) FT /locus_tag="Nwi_0160" FT /colour=11 FT misc_feature complement(join(186083..186136,186167..186232,186269..186334,186419..186475,186512..186577,186593..186658,186767..186832,186908..186973,187037..187102,187121..187177,187205..187270,187286..187351)) FT /colour=11 FT /locus_tag="Nwi_0160" FT /note="12 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 187584..189338 FT /locus_tag="Nwi_0161" FT /EC_number="2.3.2.2" FT /product="gamma-glutamyltranspeptidase" FT /note="TIGRFAM: Gamma-glutamyltranspeptidase: (2.7e-216)" FT /note="PFAM: Gamma-glutamyltranspeptidase: (1.1e-230)" FT /note="SPTR top hit: 'Q89WU5 Gamma-glutamyltranspeptidase. FT Bradyrhizobium japonicum., evalue=0.0, 72% identity hit'" FT /note="KEGG top hit: 'bja:blr0583 ggt EC=2.3.2.2 FT category=Metabolism; Metabolism of Other Amino Acids; FT Taurine and hypotaurine metabolism [PATH:bja00430] FT Metabolism; Metabolism of Other Amino Acids; Selenoamino FT acid metabolism [PATH:bja00450] Metabolism; Metabolism of FT Other Amino Acids; Cyanoamino acid metabolism FT [PATH:bja00460] Metabolism; Metabolism of Other Amino FT Acids; Glutathione metabolism [PATH:bja00480] , FT evalue=0.0, 72.884283% identity hit'" FT /note="COGs: 'evalue=1.0e-165 score=576 category=E FT group=COG0405 Gamma-glutamyltransferase'" FT /note="InterPro IPR000101" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=10 FT /translation="MIRREIRRYVFFLFAMSVIVAWTPLSSLAFAQDARGAVPAVTSDAIRPVAAKHGMVVAQERLAARIGADVLAQGGNAVDA FT AVATGFALAVTYPRAGNIGGGGFMLIHLADSSRDIAIDYRETAPGATGRDIFLGADGKPDPAKSRDSALGIGVPGTVAGL FT ALALDRYGSGRFTLARLLQPAITLAREGITVADDSADTLSGSHDRLARWPSSMKIFARPDGAALREGDRLVQTDLAATLT FT AIAGQGPQGFYEGPVASKLVKGIGAAGGIMTLEDLKSYRPLIREPVRGRYRGYDIISMPLSSSGGTVLLESLNILEGFPM FT RDLHQGSPDSLHVLVEAMKRAYADRARHLGDPAFVNAPVTTLLAKDYAAKQRASIDMMNATPADAVLASPREGDNTTHFS FT VADAFGNVVSNTYTLNFSYGVGLVAEGTGVLLNNELDDFTAAPGAANAFGLVGFEANLPGPGKRPLSSMTPTIVLKDGKP FT VLATGSPGGSRIVSTVLQVIVNVLDYDMNIAAAVQAPRLHHQWLPDEVRAEEGFPDGVIAELRARGHTVVVPMGQTSANS FT IAITPDGLFGAPDPRTRGSSAAGY*" FT sig_peptide 187584..187679 FT /colour=11 FT /locus_tag="Nwi_0161" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.960 atresidue 32" FT gene 187584..189338 FT /locus_tag="Nwi_0161" FT /colour=10 FT misc_feature 187608..187676 FT /colour=11 FT /locus_tag="Nwi_0161" FT /note="1 probable transmembrane helix predicted FT byTMHMM2.0" FT CDS 189383..190732 FT /locus_tag="Nwi_0162" FT /product="Multi antimicrobial extrusion protein MatE" FT /note="TIGRFAM: Multi antimicrobial extrusion protein FT MatE: (1.6e-73)" FT /note="PFAM: Multi antimicrobial extrusion protein MatE: FT (2.3e-31)" FT /note="SPTR top hit: 'Q89WU1 Blr0587 protein. FT Bradyrhizobium japonicum., evalue=1e-151, 59% identity FT hit'" FT /note="KEGG top hit: 'bja:blr0587 category=Unassigned, FT evalue=1e-152, 59.910913% identity hit'" FT /note="COGs: 'evalue=2e-51 score=197 category=V FT group=COG0534 Na+-driven multidrug efflux pump'" FT /note="InterPro IPR002528" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MMTTQPLWRAYVLFLMPMMLSNVLQSLFGTVNGIYLGQMIGVDALAAVSIFFPVMFFFLSFILGLGAGSSMLIGQAWGAR FT EAGKAKAIAGTTLALTLLGGGVIAVGGGLFARELMMALAVPSNILDDATDYARIMMITMPAIFTFLLATAMMRGVGDTVT FT PLWALAISTAIGLVVTPALIRGWFGLPRLGVVSAAIASAISAVVTLLWLGLHMRWMNHPLAPDKVLLRAMRLDRELLGKV FT LRIGIPTAVQLMAMSLAEIVLLGIVNGFGSDATAAYGAVNQVLGYAQFPAISIAITASIFAAQAIGAGESERIGAVVRTA FT MWLNLLMTGGLVVLGYLFSRTIVGLFITSPEVLELAQTLLYIVLWSTVPFGMACVFAATMRASGTVMVPTLLSILAIVVV FT EVPVAIVLSRQIGVEGVWIAYPAAFCAMMALQMAFYLMVWRKQEIRRLI*" FT gene 189383..190732 FT /locus_tag="Nwi_0162" FT /colour=9 FT misc_feature join(189401..189469,189512..189580,189641..189709,189782..189850,189869..189937,189947..190015,190109..190177,190235..190303,190340..190408,190451..190519,190538..190606,190634..190702) FT /colour=11 FT /locus_tag="Nwi_0162" FT /note="12 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 190817..191737 FT /locus_tag="Nwi_0163" FT /EC_number="1.1.1.169" FT /product="ketopantoate reductase ApbA/PanE" FT /note="TIGRFAM: Ketopantoate reductase ApbA/PanE: FT (5.1e-62)" FT /note="PFAM: Ketopantoate reductase ApbA/PanE: (1.1e-52)" FT /note="SPTR top hit: 'Q89WT9 2-dehydropantoate 2-reductase FT (EC 1.1.1.169) (KPA reductase) (Ketopantoate reductase). FT Bradyrhizobium japonicum., evalue=1e-112, 66% identity FT hit'" FT /note="KEGG top hit: 'bja:blr0589 EC=1.1.1.169 FT category=Metabolism; Metabolism of Cofactors and Vitamins; FT Pantothenate and CoA biosynthesis [PATH:bja00770] , FT evalue=1e-113, 66.557377% identity hit'" FT /note="COGs: 'evalue=8e-59 score=220 category=H FT group=COG1893 Ketopantoate reductase'" FT /note="InterPro IPR003710" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=12 FT /translation="MRILVVGAGATGGYFGGCLLRAGQDVTFLVRPKRATELASAGLVIRSPHGDFTLDNPPTVQADGVSETFDLVLLSCKAFD FT LEDAIASFARAVGPTTAIVPLLNGMLHLETLDAAFSRERVLGGLCSLAVTLNEKREVVHLAPMHSLRFGERDGGASERVR FT AIAEAFAGARCGAQPSETIIQDMWEKWVFLAALAGATCVMRASIGQIVAAPGGRDFMLALTDEAAGIAKAAGYAPREEFL FT SGATAMLTAAGSQLTASMFRDIETGARVEADHIMGDLIARAEAAKLPVPKLRTIHTHLKAYENRRG* FT " FT gene 190817..191737 FT /locus_tag="Nwi_0163" FT /colour=12 FT CDS complement(191782..192474) FT /locus_tag="Nwi_0164" FT /EC_number="2.5.1.18" FT /product="glutathione S-transferase" FT /note="PFAM: Glutathione S-transferase, C-terminal: FT (1.3e-08)" FT /note="SPTR top hit: 'Q6NDR1 Possible glutathione FT S-transferase. Rhodopseudomonas palustris., evalue=1e-109, FT 81% identity hit'" FT /note="KEGG top hit: 'rpa:RPA0043 EC=2.5.1.18 FT category=Metabolism; Metabolism of Other Amino Acids; FT Glutathione metabolism [PATH:rpa00480] , evalue=1e-109, FT 81.739130% identity hit'" FT /note="COGs: 'evalue=6e-22 score=98.0 category=O FT group=COG0625 Glutathione S-transferase'" FT /note="InterPro IPR004045:IPR004046" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MFTLLHHPFCPQSRFIRLILGEHGLDVRPVEERVWERREAFLRLNPAGTTPVLIAEGIPAVPGAAIIADYLDETYGERVG FT ERRLLPTSMPERIEVRRLMAWFNEKFFEEVSSPLVTERIYKRFMAEEIGGGPPETDVIRAARTNVRYHLAYIGWLARTRN FT YLAGDRLTYADLAAAAHLSAIDYLGDVPWAEDEAAKAWYARIKSRPSFRPLLSEWLAGVPASRTYVDLDF* FT " FT gene complement(191782..192474) FT /locus_tag="Nwi_0164" FT /colour=9 FT CDS 192738..193544 FT /locus_tag="Nwi_0165" FT /EC_number="2.7.1.66" FT /product="Bacitracin resistance protein BacA" FT /note="TIGRFAM: Bacitracin resistance protein BacA: FT (4e-72)" FT /note="PFAM: Bacitracin resistance protein BacA: FT (4.3e-119)" FT /note="SPTR top hit: 'Q89WH1 Undecaprenyl-diphosphatase FT (EC 3.6.1.27) (Undecaprenyl pyrophosphate phosphatase) FT (Bacitracin resistance protein). Bradyrhizobium FT japonicum., evalue=1e-121, 80% identity hit'" FT /note="KEGG top hit: 'bja:blr0716 EC=3.6.1.27 FT category=Metabolism; Glycan Biosynthesis and Metabolism; FT Peptidoglycan biosynthesis [PATH:bja00550] , FT evalue=1e-121, 80.970149% identity hit'" FT /note="COGs: 'evalue=6e-64 score=237 category=V FT group=COG1968 Uncharacterized bacitracin resistance FT protein'" FT /note="InterPro IPR003824" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MISDAIRAVILGIIEGVTEFLPVSSTGHLLLAERFFDLGSGNFWDTFTVLIQPGAILAIVVIYFAKLWRVALGMFSNPAD FT RRFVIGVLAAFLPAVIVGLIAGKYIKELLFNPWVVCFSLIVGGAVLMWVDQLDHRPREHDATAFPLPMYVWIGIAQCVAM FT IPGVSRSGATIVSAMLLGADKRAAAEFSFFLAIPTMTGAFAYDFYKNHADMTTDDLGTVAIGFVVSFVTAIIVVKAFLSY FT VTRNGFTFFAWWRVIVGTLGLIALALGR*" FT gene 192738..193544 FT /locus_tag="Nwi_0165" FT /colour=9 FT misc_feature join(192873..192941,192984..193043,193062..193121,193164..193232,193290..193349,193392..193460,193479..193538) FT /colour=11 FT /locus_tag="Nwi_0165" FT /note="7 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(193564..194625) FT /locus_tag="Nwi_0166" FT /EC_number="1.1.1.145" FT /product="NAD-dependent epimerase/dehydratase" FT /note="PFAM: NAD-dependent epimerase/dehydratase: FT (9.7e-16) 3-beta hydroxysteroid dehydrogenase/isomerase: FT (8.5e-10) dTDP-4-dehydrorhamnose reductase: (9.8e-08) FT NmrA-like: (5.5e-06) NmrA-like: (0.0011)" FT /note="SPTR top hit: 'Q89WH0 Oxidoreductase. FT Bradyrhizobium japonicum., evalue=1e-128, 74% identity FT hit'" FT /note="KEGG top hit: 'bja:bll0717 EC=1.6.5.3 1.6.99.3 FT category=Metabolism; Metabolism of Cofactors and Vitamins; FT Ubiquinone biosynthesis [PATH:bja00130] Metabolism; Energy FT Metabolism; Oxidative phosphorylation [PATH:bja00190] , FT evalue=1e-128, 74.763407% identity hit'" FT /note="COGs: 'evalue=1e-24 score=107 category=G FT group=COG0702 nucleoside-diphosphate-sugar epimerases'" FT /note="InterPro IPR001509:IPR002225:IPR005913:IPR008030" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=4 FT /translation="MAGWTARRLTCRGTAEYPFSRPDTNAFEDQIMASNSDTLVTVFGGSGFLGRYVVRALAKRDYRIRVGVRRPELAGHLQPL FT GKVGQIHAVQVNLRHPASVRAAMRGSEVAVNLVGILTKSGRQTFDAVVAKGAATVAETAAAAGARLVHVSAIGADPASAS FT AYARAKASGEKAVLAAVPSATILRPSVMFGPEDQFANRFAALALISPMLPLIGGGATRMQPVHVGDVATAVADAVDGRTK FT AGAVYELGGPDVLSMREIMRIILRVIERERMLVPVPFLMARLMAMGLQFAPGPLKLTPDQVALLRTDNVVSNTATAAGLT FT LQGLGIAPDSMEAVVPQYLWRFRKAGQFAPKGA*" FT gene complement(193564..194625) FT /locus_tag="Nwi_0166" FT /colour=4 FT tRNA 194684..194770 FT /locus_tag="Nwi_R0003" FT /gene="tRNA-Leu1" FT /note="anticodon CAG, Cove Score=77.71" FT /product="tRNA_Leu" FT /colour=8 FT CDS 194958..195530 FT /locus_tag="Nwi_0167" FT /product="TPR repeat protein" FT /note="PFAM: TPR repeat: (0.041) Tetratricopeptide TPR_3: FT (1.6) Tetratricopeptide TPR_4: (0.017) Tetratricopeptide FT TPR_4: (0.00013)" FT /note="SMART: TPR repeat: (0.00016)" FT /note="SPTR top hit: 'Q8YQI5 All3838 protein. Anabaena sp. FT (strain PCC 7120)., evalue=2e-50, 55% identity hit'" FT /note="KEGG top hit: 'ana:all3838 category=Unassigned, FT evalue=1e-50, 55.307263% identity hit'" FT /note="COGs: 'evalue=0.005 score=35 category=R FT group=COG4783 Putative Zn-dependent protease contains TPR FT repeats'" FT /note="InterPro IPR001440:IPR002151:IPR011716:IPR011717" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MAVSDIMLAARLNDQAELFREKGRYDEAEPLYKQALAIFAKARGFDHPSVALALTDLAELYTLQNRYDEAEPLYQRALVI FT WKKAVGPHHPDIVQSLNSLANLYSVQGRYAEAEPLYKRAIAIFEKSLGANHPSVASALDNLASIYKAEARYAEAEPLYKT FT ALAIREKSLGPDHPDVARSRDNLAGLPGAQ*" FT gene 194958..195530 FT /locus_tag="Nwi_0167" FT /colour=11 FT CDS complement(195801..196160) FT /locus_tag="Nwi_0168" FT /product="hypothetical protein" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=0 FT /translation="MQADVKKQMLSILNFRLLALLVPALALSILAGMVMYALGYFSMVYGEVVLVLKILMHLLLAVWSALKAILLGTVVFGLLL FT VFLSPVLIVLWELRKTRNLPSDDAILPPQTSSGVAGETP*" FT gene complement(195801..196160) FT /locus_tag="Nwi_0168" FT /colour=0 FT misc_feature complement(join(195888..195953,195975..196040,196056..196121)) FT /colour=11 FT /locus_tag="Nwi_0168" FT /note="3 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(196041..196160) FT /colour=11 FT /locus_tag="Nwi_0168" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.969) with cleavage site probability FT 0.368 atresidue 40" FT CDS complement(196227..197042) FT /locus_tag="Nwi_0169" FT /product="Protein of unknown function DUF88" FT /note="PFAM: Protein of unknown function DUF88: (0.00028)" FT /note="SPTR top hit: 'Q89QG4 Blr3164 protein. FT Bradyrhizobium japonicum., evalue=1e-64, 50% identity FT hit'" FT /note="KEGG top hit: 'bja:blr3164 category=Unassigned, FT evalue=7e-65, 50.000000% identity hit'" FT /note="COGs: 'evalue=5e-06 score=45 category=S FT group=COG1432 Uncharacterized conserved protein'" FT /note="InterPro IPR002790" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MKAEPRQRLPRFAVFIDAENVPPKFADGIFREIAQLGDAPVRLIYGNLSDPNLKGWTEVLPDHSLERRDPAVKGRNSADM FT AIVIDAMDLLHDGRIHGFCLISSDSDFTGLAARLRREGANVYGFGEKKTPDCFRRACNRFISLESLLPRKPARKPIAVSP FT SILPNSNALKPPSDAVPILNKALSRIESEDGWARLGQVGQQIPKLFSDFDIRTYGFSKLSRLVRKTGAFEIDENNGPIRI FT RRAKRWNPTTPGRQVQDLSLSAGSSARQRPS*" FT gene complement(196227..197042) FT /locus_tag="Nwi_0169" FT /colour=13 FT CDS 197184..197468 FT /locus_tag="Nwi_0170" FT /product="hypothetical protein" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=0 FT /translation="LKLFIKSLGVIRAGRWPPGLSKGSRRSCVRALQLLTESEAELYFLDLTRFLHSNRCPSPDQARGHASFDNAIVIQRYFSRQSIRRNQDTMKAET*" FT gene 197184..197468 FT /locus_tag="Nwi_0170" FT /colour=0 FT CDS 197468..198088 FT /locus_tag="Nwi_0171" FT /product="3'-5' exonuclease" FT /note="PFAM: 3'-5' exonuclease: (1.9e-36)" FT /note="SMART: 3'-5' exonuclease: (1.3e-34)" FT /note="SPTR top hit: 'Q6NDQ9 3'-5' exonuclease (EC FT 3.1.13.-). Rhodopseudomonas palustris., evalue=2e-90, 81% FT identity hit'" FT /note="KEGG top hit: 'rpa:RPA0046 EC=3.1.26.3 FT category=Unassigned, evalue=1e-90, 81.553398% identity FT hit'" FT /note="COGs: 'evalue=2e-61 score=229 category=J FT group=COG0349 Ribonuclease D'" FT /note="InterPro IPR002562" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=7 FT /translation="MTIRLHRGDLPHQDLARYTGSAAIDTETMGLKPHRDRLCVVQMSPGDGSADVIQIARGQRDAPNLIKLLKDPAIVKIFHF FT ARFDLAALYNAFGVMPRPVYCTKIASRLIRTYTDRHGLKDLVRELLSIDLSKQQQSSDWGSPTLSDAQLAYAASDVLHLH FT ALRDKLEATLAREDRSALAQACFEFLPSRAMLDLAGWETEDIFAHS*" FT gene 197468..198088 FT /locus_tag="Nwi_0171" FT /colour=7 FT CDS 198297..198989 FT /locus_tag="Nwi_0172" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q89WG7 Blr0720 protein. FT Bradyrhizobium japonicum., evalue=2e-73, 65% identity FT hit'" FT /note="KEGG top hit: 'bja:blr0720 category=Unassigned, FT evalue=1e-73, 65.454545% identity hit'" FT /note="COGs: 'evalue=2e-29 score=122 category=S FT group=COG5375 Uncharacterized protein conserved in FT bacteria'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="VYPVQNPTYQAGIQTGLEARFARAARHSRMVRTLRIAVPAAVGLAMAGLIGVAAFNPFRTLANLPLDMDNLVVSGTKITM FT ESPRLAGFTPDKRPYEMQATTATQDVADPDHVELHTLRAKVLMEDRTTVTLNSRTGVFNTKTQVLDLRKDILMLSSTGYE FT ARLTHAIVDMGRGTVTSDQPVDVKLLNGTLTADTMQVTEKGDVVRFENNVVMHLVMDRAPADAGTGGDKE* FT " FT gene 198297..198989 FT /locus_tag="Nwi_0172" FT /colour=13 FT misc_feature 198402..198470 FT /colour=11 FT /locus_tag="Nwi_0172" FT /note="1 probable transmembrane helix predicted FT byTMHMM2.0" FT CDS 198986..199669 FT /locus_tag="Nwi_0173" FT /product="OstA-like protein" FT /note="PFAM: OstA-like protein: (2e-20)" FT /note="SPTR top hit: 'Q89WG6 Blr0721 protein. FT Bradyrhizobium japonicum., evalue=2e-71, 72% identity FT hit'" FT /note="KEGG top hit: 'bja:blr0721 category=Unassigned, FT evalue=1e-71, 72.248804% identity hit'" FT /note="COGs: 'evalue=3e-18 score=85.4 category=S FT group=COG1934 Uncharacterized protein conserved in FT bacteria'" FT /note="InterPro IPR005653" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MISAVQNRRRFFLPAFRMAVLLRGGVVAVALMAAGEAAAQSTVQGVPNAMQGFSQNRDQPIQIEAATLEMRDKKKEATFS FT GNVKVVQGDTTMTSKTLVVYYQSSDTAKGGAPSKKKPAAVAAPAPSGASSIKRLEARGNVVVTQKDQVVTGDTAVFDTTT FT NLITMQGKVVLTQCKNVLRGDRLLVDMTTGVSRVESNSGRVQGLFIQGDQDCASPGPAIPLAPKKPR* FT " FT sig_peptide 198986..199105 FT /colour=11 FT /locus_tag="Nwi_0173" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.994) with cleavage site probability FT 0.636 atresidue 40" FT gene 198986..199669 FT /locus_tag="Nwi_0173" FT /colour=13 FT misc_feature 199022..199090 FT /colour=11 FT /locus_tag="Nwi_0173" FT /note="1 probable transmembrane helix predicted FT byTMHMM2.0" FT CDS 199980..200978 FT /locus_tag="Nwi_0174" FT /EC_number="3.6.3.25" FT /product="ABC transporter, ATPase subunit" FT /note="PFAM: ABC transporter, ATPase subunit: (8.4e-69)" FT /note="SMART: ATPase (8.7e-11)" FT /note="SPTR top hit: 'Q89WG5 Blr0722 protein. FT Bradyrhizobium japonicum., evalue=1e-143, 79% identity FT hit'" FT /note="KEGG top hit: 'bja:blr0722 category=Unassigned, FT evalue=1e-143, 79.402985% identity hit'" FT /note="COGs: 'evalue=1.0e-109 score=387 category=R FT group=COG1137 ABC-type (unclassified) transport system FT ATPase component'" FT /note="InterPro IPR001687:IPR003439:IPR003593" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MVDIFNVFRKRPQKRAARGIARTRTDITALGDAIGDMLTHPVRDAPPVARGSRRDAPPSRAPARPAPETSRPEAARLRAA FT SSGTAAPRMATRPGYLAVHGVEKSFGSRQVVRGVSIYVRRGEAVGLLGPNGAGKTTVFYMITGLIPADRGAIELDGHDVT FT RLPMYQRARLGIGYLPQEASIFRGLSVEQNIRAVLEVVEPNKKKREAELDALLEEFNITRLRKSPSIALSGGERRRVEIA FT RALATRPNYMLLDEPFAGIDPIAVGDIQDLVRHLTNRGIGVLITDHNVRETLGLTDRAYIVYAGEILTEGSPEAIVNDPD FT VRRLYLGEEFRL*" FT gene 199980..200978 FT /locus_tag="Nwi_0174" FT /colour=11 FT CDS complement(201036..201323) FT /locus_tag="Nwi_0175" FT /product="hypothetical protein" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=0 FT /translation="MLKTSLIAVAAAGFLLALPASAADFSFTDEAPQMICDHDGNCYSAHPPRFAERWQDDDNGDDVYERRDYHSRYAPPSEFHRDDDGPATGYDGGPW*" FT gene complement(201036..201323) FT /locus_tag="Nwi_0175" FT /colour=0 FT sig_peptide complement(201255..201323) FT /colour=11 FT /locus_tag="Nwi_0175" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 1.000 atresidue 23" FT CDS 201488..201868 FT /locus_tag="Nwi_0176" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q89FA2 Bll6799 protein. FT Bradyrhizobium japonicum., evalue=2e-22, 52% identity FT hit'" FT /note="KEGG top hit: 'bja:bll6799 category=Unassigned, FT evalue=8e-23, 52.845528% identity hit'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MKTVIAVVASLALLSSVAMAQERAGSAALGALSGAVVLGPVGAVAGAVVGYTAGPSIARSWGLRRSSARRRQSSRPSHRR FT TTANGSRRTPDAQTASRNAAPAAATAAEPHPVHPRPSMPPVQALDY*" FT sig_peptide 201488..201550 FT /colour=11 FT /locus_tag="Nwi_0176" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 1.000 atresidue 21" FT gene 201488..201868 FT /locus_tag="Nwi_0176" FT /colour=13 FT misc_feature 201572..201640 FT /colour=11 FT /locus_tag="Nwi_0176" FT /note="1 probable transmembrane helix predicted FT byTMHMM2.0" FT CDS 202121..203752 FT /locus_tag="Nwi_0177" FT /product="sigma-54, DNA-binding" FT /note="TIGRFAM: Sigma-54, DNA-binding: (4.7e-150)" FT /note="PFAM: Sigma-54 factor: (5.4e-25) Sigma-54 factor, FT core-binding region: (1.5e-118) Sigma-54, DNA-binding: FT (5.8e-113)" FT /note="SPTR top hit: 'Q6NDQ5 RNA polymerase sigma 54 FT subunit, RpoN. Rhodopseudomonas palustris., evalue=0.0, FT 76% identity hit'" FT /note="KEGG top hit: 'rpa:RPA0050 rpoN FT category=Unassigned, evalue=0.0, 76.258993% identity hit'" FT /note="COGs: 'evalue=1.0e-128 score=453 category=K FT group=COG1508 DNA-directed RNA polymerase specialized FT sigma subunit sigma54 homolog'" FT /note="InterPro IPR000394:IPR007046:IPR007634" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=6 FT /translation="MALTQKLEFRQSQSLVMTPQLMQAIKLLQLSNLDLSAYVEEELERNPLLERASDGSGPPAAEAASDVEYSEGDEAAFEDH FT GGGERTGAQDPASTPEEWMNRDLGSRAEIEQTFDSGLENVFPEEPAEAAARTAQDAAPSAFTEWGGGASSDDSYNLEAFV FT AAEITLSEHLAEQLAVALTSPAQRMIGRYLIDLVDEAGYLPADLGEAGDRLGAGESDVAAAVAVLQTFDPPGICARSLSE FT CLAIQLREKNRYDPAMQALVEHLELLARRDFAALRRICGVDDEDLAEMIGEIRHLDPKPGLRFGAARTQSVVPDVYVRPG FT PDGGWLVELNSETLPRVLVNHTYYAELSKTIRKDGDKTYFTDCLQNATWLVRALDQRARTILKVATEIVRQQDGFFAHGI FT AHLRPLNLRTVADAIQMHESTVSRVTANKYMATNRGIFELKYFFTASIAAADGGSAHSAEAVRHHIKRLIDAESPSAILS FT DDTIVERLREAGIDIARRTVAKYREALRIPSSVQRRREKQNLPGGARAETRKPPNRPRDAAPA* FT " FT gene 202121..203752 FT /locus_tag="Nwi_0177" FT /colour=6 FT CDS 203809..204405 FT /locus_tag="Nwi_0178" FT /product="sigma 54 modulation protein/ribosomal protein FT S30EA" FT /note="TIGRFAM: Sigma 54 modulation protein/ribosomal FT protein S30EA: (2.4e-16)" FT /note="PFAM: Sigma 54 modulation protein/ribosomal protein FT S30EA: (1e-38)" FT /note="SPTR top hit: 'P30334 Probable sigma(54) modulation FT protein (ORF203). Bradyrhizobium japonicum., evalue=3e-81, FT 77% identity hit'" FT /note="KEGG top hit: 'bja:blr0724 category=Unassigned, FT evalue=2e-81, 77.720207% identity hit'" FT /note="COGs: 'evalue=1e-17 score=83 category=J FT group=COG1544 Ribosome-associated protein Y (PSrp-1)'" FT /note="InterPro IPR003489" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=7 FT /translation="MTLRISGKSINVGEALRGRLNSRTDEVLRKYFDGQYSGHITLSKDGFGFRTDCALHLDSGVTLEAESNAADAYASADQAL FT LQIEKRLRRYKSRLKDHSARKARAAAETIAGLDAPSYVIEAPAMNGEGEVTAFNPVIIAETITSLRRLSVSEAVMELDFT FT GAPVLVFQHGSSGRVNMIYRRPDGNVGWIDPPAVNGSA*" FT gene 203809..204405 FT /locus_tag="Nwi_0178" FT /colour=7 FT CDS 204654..205115 FT /locus_tag="Nwi_0179" FT /EC_number="2.7.1.69" FT /product="PTS IIA-like nitrogen-regulatory protein PtsN" FT /note="TIGRFAM: PTS IIA-like nitrogen-regulatory protein FT PtsN: (6.2e-52)" FT /note="PFAM: Phosphoenolpyruvate-dependent sugar FT phosphotransferase system, EIIA 2: (4.3e-12)" FT /note="SPTR top hit: 'P30335 Nitrogen regulatory protein FT (Enzyme IIA-NTR) [Includes: Phosphotransferase enzyme IIA FT component (EC 2.7.1.-) (PTS system EIIA component)]. FT Bradyrhizobium japonicum., evalue=4e-71, 91% identity FT hit'" FT /note="KEGG top hit: 'bja:blr0725 ptsN EC=2.7.1.69 FT category=Unassigned, evalue=2e-71, 91.390728% identity FT hit'" FT /note="COGs: 'evalue=2e-29 score=121 category=T FT group=COG1762 Phosphotransferase system FT mannitol/fructose-specific IIA domain (Ntr-type)'" FT /note="InterPro IPR002178:IPR006320" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=15 FT /translation="MMITDLVAPEAILPALKVTSKKQALQELAARAAELTGQNDRAIFEVLLRREKLGTTAVGYGVAIPHGKLQKLEKIFGLFA FT RLERSIDFEAMDGQPVDLIFLLLAPEGAGADHLKALARIARLLRDQDIANKLRASRDAEAIYSVLALPPATVP* FT " FT gene 204654..205115 FT /locus_tag="Nwi_0179" FT /colour=15 FT CDS complement(205145..205675) FT /locus_tag="Nwi_0180" FT /product="transposase, IS4" FT /note="PFAM: Transposase, IS4: (6.1e-16)" FT /note="SPTR top hit: 'Q81ZP9 Transposase IS4 family. FT Nitrosomonas europaea., evalue=5e-42, 53% identity hit'" FT /note="KEGG top hit: 'neu:NE2446 category=Unassigned, FT evalue=3e-42, 53.892216% identity hit'" FT /note="COGs: 'evalue=1e-13 score=69.4 category=L FT group=COG3293 Transposase and inactivated derivatives'" FT /note="InterPro IPR002559" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=2 FT /translation="VGTGVLHPDSRSRQPVSDARLNHRSSPSAGGYRKRGAKDQALGRSRGGLTTKVHMLADALGRPLRFIVTAGQVGDITQAP FT ALLEAQAGDAVLADKAYDSNALRALIAGMGAEAVIPSNRTRKIIIPHDAGLYKHRNRIERCFNRLKHFRRFATRYDRRTV FT HFTGFVHLAAALIWLP*" FT gene complement(205145..205675) FT /locus_tag="Nwi_0180" FT /colour=2 FT CDS complement(205528..205926) FT /locus_tag="Nwi_0181" FT /product="transposase" FT /note="SPTR top hit: 'Q81ZK8 Transposase. Nitrosomonas FT europaea., evalue=1e-48, 68% identity hit'" FT /note="KEGG top hit: 'neu:NE2412 category=Unassigned, FT evalue=5e-49, 68.595041% identity hit'" FT /note="COGs: 'evalue=2e-13 score=68.2 category=L FT group=COG3293 Transposase and inactivated derivatives'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=2 FT /translation="VILTRSCTMGIKRYELSDHQWAKIAPLLPGKASDPGRTGSDNRLFVNGCLWVLRSGAHWCDLPERYGRWKTVHRRFSRWC FT HAGVWERVFSTLTADRDNQYLMLDSTIVRAHQQAATGKGGPRIRRWGVPEVD*" FT gene complement(205528..205926) FT /locus_tag="Nwi_0181" FT /colour=2 FT CDS complement(205982..207352) FT /locus_tag="Nwi_0182" FT /product="glutamate--cysteine ligase" FT /note="TIGRFAM: Glutamate--cysteine ligase, plant: FT (1.5e-251)" FT /note="PFAM: Glutamate--cysteine ligase, GCS2: (3.9e-145)" FT /note="SPTR top hit: 'Q89V83 GshA protein. Bradyrhizobium FT japonicum., evalue=0.0, 86% identity hit'" FT /note="KEGG top hit: 'bja:blr1164 gshA EC=6.3.2.2 FT category=Metabolism; Amino Acid Metabolism; Glutamate FT metabolism [PATH:bja00251] Metabolism; Metabolism of Other FT Amino Acids; Glutathione metabolism [PATH:bja00480] , FT evalue=0.0, 86.184211% identity hit'" FT /note="COGs: 'evalue=1.0e-168 score=584 category=H FT group=COG3572 Gamma-glutamylcysteine synthetase'" FT /note="InterPro IPR006336:IPR011556" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=12 FT /translation="MARDQIDMTLLQSRDELVAWLEAGVKPASEFRIGTEHEKTPFTLGGHDPVPYEGPRGIGALLEGMRLLLGWEPIMEQGNI FT IGLHDVTGGGAISLEPGGQFELSGAPVETVHQTQSELAAHLAQVKEVATPLGIGFLGLGMTPSWSLAQIPMMPKGRYRIM FT NDYMPKVGRYGLDMMFRTCTVQTNLDFSSESDMVKKLRVSVALQPVATALFANSPFTEGKPNGFLSYRSEIWRDTDNARA FT GMIPWAFEDGMGFERWVDYALDVPMYFIKRGENYIDVSGSSFRDFFDGRNEAIPGERPTLSDWANHLSTIFPEVRLKRYL FT EMRGADGVSWGRLPALSAFWVGLLYDDASLEGAWDIAKRWNAQERQALRDDVSRLGFKARIKNRYLFEIAKECLLLAHGG FT LRRRGRIDRLGRDESRHLEPLDQILDSGRSPAEEMLEKFNGAWGGSVEPAYSEYAF* FT " FT gene complement(205982..207352) FT /locus_tag="Nwi_0182" FT /colour=12 FT CDS 207838..211017 FT /locus_tag="Nwi_0183" FT /EC_number="3.5.2.6" FT /product="sel1-like repeat protein" FT /note="SMART: Sel1-like repeat: (3.4e-14)" FT /note="SPTR top hit: 'Q89V92 Bll1155 protein. FT Bradyrhizobium japonicum., evalue=0.0, 54% identity hit'" FT /note="KEGG top hit: 'bja:bll1155 category=Unassigned, FT evalue=0.0, 54.270923% identity hit'" FT /note="COGs: 'evalue=3e-22 score=101 category=R FT group=COG0790 FOG: TPR repeat SEL1 subfamily'" FT /note="InterPro IPR006597" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MNSRGSSSDDGIETSDREGADAAARRAGTSRDDGPGSGSGGTPPGPTQPAASPQNSPEMRDIHQRLDSITRQIDQLASPA FT ENGEPAVARQLNDAISRLDARLARVTAQTPAANPQQRGASGSYDRPTSPDLVTLESAIAEIAARQHELDETPRAPSSYSS FT APVASAMRTSRQADFSSLERQLFKITSQIESLQRPDGIEQSIAAFRIELADIRHVITEAMPRRAIESLENEIRSLSQRID FT EVRQNGSDGQALANIERALKEIYDALRSLKPAEQLSGFDEAIRNLGNKIDSIVRGSGDSGMMQQLESAIGALRGIVSNVA FT SNDALERLGNDLNMLSSKVEQLGRPAGDGDFYAALEQRMAALTQTLENRESPASGSSFEQLEETVRALSERLDRLPAGHD FT SSSALAHLEQRVSMLLERLETAGEYSGSHLGRVEEGLQDILHCLERQQAGLAAMSESGPRSAVPTMDSEVVEAIKRELSE FT MRFCQSETDRHTQDSLEAVHNTLEHVVDRLAMIESDLRAVHTMPARAEPSRGGIMPERTANLPPKPELPNPVLSQAATQP FT TPARTATAAPIPRAIADALIPKETFDPDRVVPSTTAPSPRPAIDPKLPPDHPLEPGTRPAGRAATPSERIAASESETGDV FT AETPREQSGSSFIAAARRAAKAAAASTPSPDKAGRTKVAIEPARPATGGSDITSKIRSLLVAASVVVIVLSSFKFAMTLL FT DSSPRATLSESDHAAPVTKPPADPEGSAGPEIPQPPSMIAPTPIDRQSMIAPPAGDSAAPAKNPSDAMPASRPDTPSADV FT TGAIPNGLTPEPAATPPAASLPDSIGGTTLRSAALQGDPAASFEVGVRYAEGKGVTVNYDEAAKWYERAAHAGIVPAMFR FT LGALHEKGLGTSKDVDTARRYYLQAADRGNAKAMHNLAVLDADGGGKGADYVSAAQWFSKAAERGIADSQYNLGILYARG FT IGVEQNLAKSYKWFSLAAAQGDVDSGRKRDEVAKRLDPPSLAAAKLAVQTFVVTPQPSDAVSVPGPAGGWDSAAAKPRAK FT PAPGKSARANHAMARHTAH*" FT gene 207838..211017 FT /locus_tag="Nwi_0183" FT /colour=11 FT CDS 211095..212126 FT /locus_tag="Nwi_0184" FT /product="Protein of unknown function DUF81" FT /note="PFAM: Protein of unknown function DUF81: (9.1e-31)" FT /note="SPTR top hit: 'Q89V93 Bll1154 protein. FT Bradyrhizobium japonicum., evalue=1e-131, 78% identity FT hit'" FT /note="KEGG top hit: 'bja:bll1154 category=Unassigned, FT evalue=1e-132, 78.104575% identity hit'" FT /note="COGs: 'evalue=7e-16 score=78.5 category=R FT group=COG0730 permeases'" FT /note="InterPro IPR002781" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MISVMQGTRLAAVPRPEVNAVKAPPVSSQIRKRARVQLYLPIADIPVNVLLILAMGAAVGFVSGMFGIGGGFLMTPLLIF FT VGIAPAVAVATVTSHIAASSFSGALSYWRKRAVDPMLALVLLSGGVIGTILGVLTFTRLRSLGQLDLLIALSYLVLLSGV FT GAAMSWEGLRAMLRARQNRTVPLRRSGGHGWVHGLPLKIRFKRSKIYLSAIPVIAIGLLIGFIGAVMGIGGGFILVPLLI FT YLLRVPTSTVIGTSMMLTLITMTFATVLHAATNHLVDAVLALILMTGGVTGAQFGARAGQRIRGEHLRLLLGMLILAVGI FT RFAIELGLRPADLYTVRETTGDI*" FT gene 211095..212126 FT /locus_tag="Nwi_0184" FT /colour=11 FT misc_feature join(211212..211280,211308..211376,211437..211505,211533..211601,211713..211781,211839..211907,211926..211982,212010..212078) FT /colour=11 FT /locus_tag="Nwi_0184" FT /note="8 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 212123..212914 FT /locus_tag="Nwi_0185" FT /product="Conserved hypothetical protein 2186" FT /note="TIGRFAM: Conserved hypothetical protein 2186: FT (8.5e-131)" FT /note="SPTR top hit: 'Q89V94 Bll1153 protein. FT Bradyrhizobium japonicum., evalue=6e-99, 71% identity FT hit'" FT /note="KEGG top hit: 'bja:bll1153 category=Unassigned, FT evalue=3e-99, 71.031746% identity hit'" FT /note="InterPro IPR011734" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MRTRAIATMAPLALLLAAILVAGHAHAEHLIVSVSNHRVTVTPNYSGEELVLFGSIERESDAPLPPAGYDLVVTVSGPPV FT DMVTRRKERWFGIWVNADSRQFLQVPAYLAAFANRPLDRIAAPDILRRQQLGLHNVLLTQRVGSDYADVVPSDPFRRAFI FT RLRSEHGLYRENTSAVTFLTPTLFRASIPLPAEVPTGTYTIDIKLLADGTLIAKTDTAFEIVKVGFEQFVATAARQHGMV FT YGVATALMALTAGWMASIVFRRD*" FT sig_peptide 212123..212206 FT /colour=11 FT /locus_tag="Nwi_0185" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.930 atresidue 28" FT gene 212123..212914 FT /locus_tag="Nwi_0185" FT /colour=13 FT misc_feature join(212135..212203,212834..212902) FT /colour=11 FT /locus_tag="Nwi_0185" FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(213080..213805) FT /locus_tag="Nwi_0186" FT /product="metallophosphoesterase" FT /note="PFAM: Metallophosphoesterase: (0.0005)" FT /note="SPTR top hit: 'Q89V98 Blr1149 protein. FT Bradyrhizobium japonicum., evalue=2e-93, 75% identity FT hit'" FT /note="KEGG top hit: 'bja:blr1149 category=Unassigned, FT evalue=1e-93, 75.757576% identity hit'" FT /note="COGs: 'evalue=3e-42 score=165 category=R FT group=COG1407 ICC-like phosphoesterases'" FT /note="InterPro IPR004843" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MPDLNRCARDALPPWEEQMSRVAAVTVAGADFAADLSGALFWERERLLVVSDLHLEKGSSFAMRGVLLPPYDTVATLDRL FT AAVIRRFDPRTVIALGDSFHDRDAHNRLCARDREALSGLQAGRRWIWISGNHDPAPPSGLGGLVATEWEIGGIVFRHEPT FT GAFGEIAGHLHPKARVSARGRSMERRCFASDGARMVMPAFGAFAGGLSIRNGAFARIFSADFTAHVLGHSRLHAIAASRC FT C*" FT gene complement(213080..213805) FT /locus_tag="Nwi_0186" FT /colour=11 FT CDS complement(213813..216320) FT /locus_tag="Nwi_0187" FT /product="DEAD/DEAH box helicase" FT /note="PFAM: Helicase, C-terminal: (1.3e-13) DEAD/DEAH box FT helicase, N-terminal: (1.9e-32)" FT /note="SMART: Helicase, C-terminal: (3.4e-17) DEAD/DEAH FT box helicase, N-terminal: (6.9e-29)" FT /note="SPTR top hit: 'Q89V99 Large ATP-dependent FT helicase-related protein. Bradyrhizobium japonicum., FT evalue=0.0, 76% identity hit'" FT /note="KEGG top hit: 'bja:blr1148 lhr EC=3.6.1.- FT category=Unassigned, evalue=0.0, 76.510832% identity hit'" FT /note="COGs: 'evalue=0.0 score=704 category=R FT group=COG1201 Lhr-like helicases'" FT /note="InterPro IPR001410:IPR001650:IPR011545" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="VEIADRETQPLLPEGFLRWFAARRWSPRAHQLALLRKARAGRSALLIAPTGAGKTLAGFLPTLVEISGKEKHLHTLYISP FT LKALAVDIARNLETPIAEMNLPIRVETRTGDTPVSRRQRQRRYPPDILLTTPEQIALLLASDDAPFLFSSLRRVVLDELH FT ALAISKRGDLLSLALARLWRLAPRMRTTGLSATVADPHALARFLAPQSRDKAVSADIVEADGAAAPVVEMLDTSERLPWA FT GHSARHALTEVYDLIRRNRTTLVFVNTRSQAEMLFQDLWRINDDGLAIALHHGSLDVAQRRKVEQAMTAGRLRGVVCTSS FT LDLGVDWGDVDLVINIGAPKGASRLMQRIGRANHRLDEASRAVLVPANRFEVLECRAAIDAVNENAQDTPPLRTGALDVL FT AQHVMGRACGAPFHADDLYEEVRTAAPYAALARADFDDVIDFVATGGYALKSYERFARIRQDEAGRWRIANPRARQSYRL FT NVGTIVEEAMLKVRLVRSRHGGGKGPTGAIARGGRMLGEIEEYFIEGLVTGDTFVFGGEIVRFEALAEDQVYVSRASDES FT PKVPSYMGGKFPLSTYLAERVRRLLDDERAWRGLPDQVREWLKLQSRFSRVPHAREMIVETFPRAGKHYLVCYPFEGRLA FT HQTLGMLLTRRLERARARPLGFVANEYALAVWMLGDPSSMIRQGRLNLDALFDPDMLGDDLEAWLAESALMKRTFRSCAI FT ISGLIARRFTGAEKSRRQVLFSTDLVYDVLRKHQPDHVLLRAARADAATGLLDIRRLGDMLARIRGRIVHKPLDRISPLA FT VPVMLGIGRETVYGEASDELLAEAAEQLVREATGT*" FT gene complement(213813..216320) FT /locus_tag="Nwi_0187" FT /colour=11 FT CDS 216696..218057 FT /locus_tag="Nwi_0188" FT /product="possible outer membrane protein" FT /note="SPTR top hit: 'Q6NBM3 Possible outer membrane FT protein precursor. Rhodopseudomonas palustris., FT evalue=1e-148, 57% identity hit'" FT /note="KEGG top hit: 'rpa:RPA0805 category=Unassigned, FT evalue=1e-148, 57.516340% identity hit'" FT /note="COGs: 'evalue=8e-15 score=75 category=M FT group=COG3637 Opacity protein and related surface FT antigens'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MKKILLGVLLASTAMSAQAADLAPRPYTKAPPIAPVYDWTGLYVGVNAGLGLGRNRAVHDFGVGAISTHLQPLGAVGGGQ FT IGYNWQTNSFFGPLVFGIEADIQGADMTDNRTNFAGLLQYNQRLDWFGTARGRVGLINGPMLTYVTGGWAYGHVGTTVIQ FT GGVPFAFSGGRNGWTFGSGVEAALGGNWTGKIEYLYLDFGNRTDSFAGQALRSEMRENIFRAGLNYRFGASNPYAPVATA FT NWNGLYLGGNVGGGVGRNRTTISNPAGNLAQFNLAPDGFVGGGQIGYNWQAGNIVLGLETDFQGATLQDNKTCIGCVPGA FT SFDFNSKLQWFGTVRGRLGYAVGNSMFYATGGFAYGNIRTALNTPLNNFNFSNTRTGYAVGGGIETPLPMVNLFGGPLFG FT PNWTSTTEYLFVDLGRSSFNIGGGPNVLTTGAQEHIFRTGLNYHFNIPLAPSY*" FT sig_peptide 216696..216755 FT /colour=11 FT /locus_tag="Nwi_0188" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.999 atresidue 20" FT gene 216696..218057 FT /locus_tag="Nwi_0188" FT /colour=9 FT CDS 218552..219475 FT /locus_tag="Nwi_0189" FT /EC_number="3.4.24.84" FT /product="peptidase M48, Ste24p" FT /note="PFAM: Peptidase M48, Ste24p: (1.2e-28)" FT /note="SPTR top hit: 'Q89SF0 Protease heat shock protein. FT Bradyrhizobium japonicum., evalue=1e-139, 81% identity FT hit'" FT /note="KEGG top hit: 'bja:blr2450 htpX EC=3.4.24.- FT category=Unassigned, evalue=1e-140, 81.935484% identity FT hit'" FT /note="COGs: 'evalue=9e-44 score=170 category=O FT group=COG0501 Zn-dependent protease with chaperone FT function'" FT /note="InterPro IPR001915" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MNYFRTAILLAGLTGLFMGVGYLIGGASGATIALVVAAATNLFAYWNSDRMVLSMYGAHEVDPGTAPDLHRLVAELASRA FT GLPMPRVFVMDNPQPNAFATGRNPENAAVAVTTGLMQSLSREELAGVIAHELAHIKHHDTLLMTITATIAGAISMLAQFG FT MFFGGNRDNHGPGIIGSLAMMILAPFGAMLVQMAISRTREYAADEMGARICGQPMWLASALARIENAAHQVPNMEAERAP FT ATAHMFIINPLSGRGMDNLFATHPSTENRIAALQRLAGQSGGGLAPGGPPPDPSSPWNKGSRRGPWG* FT " FT sig_peptide 218552..218668 FT /colour=11 FT /locus_tag="Nwi_0189" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.997) with cleavage site probability FT 0.402 atresidue 39" FT gene 218552..219475 FT /locus_tag="Nwi_0189" FT /colour=9 FT misc_feature join(218570..218623,218636..218689,218972..219040,219068..219136) FT /colour=11 FT /locus_tag="Nwi_0189" FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 219789..221012 FT /locus_tag="Nwi_0190" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q89WK7 Blr0671 protein. FT Bradyrhizobium japonicum., evalue=1e-168, 76% identity FT hit'" FT /note="KEGG top hit: 'bja:blr0671 category=Unassigned, FT evalue=1e-169, 76.558603% identity hit'" FT /note="COGs: 'evalue=5e-16 score=79.4 category=E FT group=COG0683 ABC-type branched-chain amino acid transport FT systems periplasmic component'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MMMKDPFAPKPERHGPTRRTALGLVVGAPLLGACSGVQQTLTNGFSSPPGSSPQPESTAGPQQGATIGTGQVKVGLILPL FT SAAGNASIAAQSMRNAAEMALSEFQNPNVQVLVKDAAGTARGAQQGAQQALDEGAEIILGPLFAASVPGVAQVARTRGVS FT VIAFSTDSSIAGRGVYLLSFLPESDVTRIVEYAASTGKRSFAAMVPENAYGNVVEAAFKQTVGRRGGRIAAFEKYGSDRA FT SAARNVAQSLRSADALLIADDGDTVVSVAAALTAAGANLRNVQLLGTGLWDNPRVFSSTTLHGGLYAAPDPAGFRAFAGR FT YRTKFGGEPVRTATLAYDAVALVAALARTQGSQRFAAETLTNASGFAGIDGLFRFRSDGTNQRGLAVMRVASGGGQSVAG FT SPKSFGA*" FT gene 219789..221012 FT /locus_tag="Nwi_0190" FT /colour=13 FT CDS complement(221163..222323) FT /locus_tag="Nwi_0191" FT /product="putative oxygen-independent coproporphyrinogen FT III oxidase" FT /note="TIGRFAM: Putative oxygen-independent FT coproporphyrinogen III oxidase: (4.6e-79)" FT /note="PFAM: Radical SAM: (1.4e-21) HemN, C-terminal: FT (3.4e-26)" FT /note="SMART: Elongator protein 3/MiaB/NifB: (1.6e-48)" FT /note="SPTR top hit: 'Q89WK6 Oxygen-independent FT coproporphyrinogen III oxidase. Bradyrhizobium japonicum., FT evalue=0.0, 83% identity hit'" FT /note="KEGG top hit: 'bja:bll0672 hemN EC=1.3.99.22 FT category=Metabolism; Metabolism of Cofactors and Vitamins; FT Porphyrin and chlorophyll metabolism [PATH:bja00860] , FT evalue=0.0, 83.378016% identity hit'" FT /note="COGs: 'evalue=1.0e-101 score=362 category=H FT group=COG0635 Coproporphyrinogen III oxidase and related FT Fe-S oxidoreductases'" FT /note="InterPro IPR004559:IPR006638:IPR007197:IPR010723" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=12 FT /translation="LSPADPAAAFGVYIHWPFCLSKCPYCDFNSHVRHAPIDEERFTRAFAREIETTAARSRGRTVSSIFLGGGTPSLMRPQTV FT GAILDAIGKHWSVADDVEVTLEANPTSVEATRFRGYRAAGVNRVSLGVQALDDSSLKALGRLHTAREAQDAVAIARSVFD FT RYSFDLIYARPDQTPAMWAGELQRAISEAAEHLSLYQLTIEAGTPFFDLHAAGKLKTPDEAMARDLYDVTQDVCARHGLP FT AYEISNHARPGAECRHNLVYWRGQEYAGIGPGAHGRLDIDGVRHAIATEKRPEAWLMRVEANGNGIVADDPLNSEERADE FT FLLMGLRLREGIDPRRYAALSGRSLDPRRIAILRDEGAIMISTDGRLRVTQDGFPVLDAVVADLAA* FT " FT gene complement(221163..222323) FT /locus_tag="Nwi_0191" FT /colour=12 FT CDS complement(222310..222945) FT /locus_tag="Nwi_0192" FT /EC_number="3.6.1.19" FT /product="Ham1-like protein" FT /note="TIGRFAM: Ham1-like protein: (9.9e-59)" FT /note="PFAM: Ham1-like protein: (3.8e-61)" FT /note="SPTR top hit: 'Q89WK5 HAM1 protein homolog. FT Bradyrhizobium japonicum., evalue=2e-99, 82% identity FT hit'" FT /note="KEGG top hit: 'bja:bll0673 category=Unassigned, FT evalue=1e-99, 82.464455% identity hit'" FT /note="COGs: 'evalue=4e-54 score=204 category=F FT group=COG0127 Xanthosine triphosphate pyrophosphatase'" FT /note="InterPro IPR002110:IPR002637" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=16 FT /translation="MHRRIAGKLVIATHNPGKLAEIRELLAPYGVEAVSAGELGLDEPEETGEDFRANARIKATSAALSAKLPAFADDSGLVVD FT ALDGAPGIHSARWAGKPADFSAAMARIERLLQERGATSADQRKAHFISALCVAWPDGHLQEVEGRVDGTLVWPPRGTAGF FT GYDPVFLPDGHGRTFGEMAGIEKHGLPPRGLGLSHRARAFVKLAEIALEPR*" FT gene complement(222310..222945) FT /locus_tag="Nwi_0192" FT /colour=16 FT CDS complement(223063..223776) FT /locus_tag="Nwi_0193" FT /EC_number="2.7.7.56" FT /product="ribonuclease PH" FT /note="TIGRFAM: Ribonuclease PH: (6.1e-164)" FT /note="PFAM: 3' exoribonuclease: (1.4e-51) 3' FT exoribonuclease: (6.7e-18)" FT /note="SPTR top hit: 'Q6NCY8 Ribonuclease PH (EC 2.7.7.56) FT (RNase PH) (tRNA nucleotidyltransferase). Rhodopseudomonas FT palustris., evalue=1e-122, 91% identity hit'" FT /note="KEGG top hit: 'rpa:RPA0329 rph EC=2.7.7.56 FT category=Unassigned, evalue=1e-122, 91.949153% identity FT hit'" FT /note="COGs: 'evalue=1e-75 score=275 category=J FT group=COG0689 RNase PH'" FT /note="InterPro IPR001247:IPR002381" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=7 FT /translation="MRPSRRAPDELRAVSLERGVVKYAEGSCLVKFGDTHVLVTATLEERLPPWLKGQGRGWVTAEYGMLPRATLERTRREASA FT GKQGGRTVEIQRLIGRSLRAAVDLEALGERQITIDCDVIQADGGTRTASITGAWVALADCVNWMKARNMLKAGVLRGNVA FT AISCGIYNGTPVLDLDYAEDSEADTDANFVMTGEGRIIEVQGTAEKVPFSDDEFLALMALAKKGVARLVDLQKMAVA* FT " FT gene complement(223063..223776) FT /locus_tag="Nwi_0193" FT /colour=7 FT CDS 223971..225059 FT /locus_tag="Nwi_0194" FT /product="negative regulator of class I heat shock FT protein" FT /note="TIGRFAM: Negative regulator of class I heat shock FT protein: (1.3e-125)" FT /note="PFAM: Negative regulator of class I heat shock FT protein: (5.9e-94)" FT /note="SPTR top hit: 'Q6NCY7 Heat-inducible transcription FT repressor hrcA. Rhodopseudomonas palustris., FT evalue=1e-180, 89% identity hit'" FT /note="KEGG top hit: 'rpa:RPA0330 hrcA FT category=Unassigned, evalue=1e-180, 89.750693% identity FT hit'" FT /note="COGs: 'evalue=4e-95 score=341 category=K FT group=COG1420 Transcriptional regulator of heat shock FT gene'" FT /note="InterPro IPR002571" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=6 FT /translation="LAHHDPIGLIAPNAGLAQLNERSRDIFRQIVESYLATGEPVGSRNISRLIAVPLSPASVRNVMSDLEQLGLIYAPHTSAG FT RLPTELGLRFFVDALMQVGDLTEPERQSIQSQLASVGKAQSVEAALEEALTRLSGLTRTAAVVLTAKSNVRLKHIEFVRL FT EPDKALVVLVAEDGQVENRVLTLPSGVPASALTEASNFLNARIRGRTLAEARLELETALAQSKAELDQLTQKIVAAGIAS FT WSGGDSDDRQLIVRGHANLLEDLHAMEDLERVRLLFDDLETKREVIDLLGRAERADGVRIFIGSENKLFSLSGSSTIIAP FT YSDGAGHIVGVLGVIGPTRLNYARVIPMVDYAARIVSQMLGR*" FT gene 223971..225059 FT /locus_tag="Nwi_0194" FT /colour=6 FT CDS 225153..225746 FT /locus_tag="Nwi_0195" FT /product="GrpE protein" FT /note="PFAM: GrpE protein: (6.7e-69)" FT /note="SPTR top hit: 'Q6NCY6 GrpE protein (HSP-70 FT cofactor). Rhodopseudomonas palustris., evalue=3e-78, 74% FT identity hit'" FT /note="KEGG top hit: 'rpa:RPA0331 category=Unassigned, FT evalue=2e-78, 74.358974% identity hit'" FT /note="COGs: 'evalue=1e-42 score=166 category=O FT group=COG0576 Molecular chaperone GrpE (heat shock FT protein)'" FT /note="InterPro IPR000740" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MTDSDGKTDKSGEPAAEVEPVVSKPYVMPDDPEDDALDALNKQLAEAKDRTLRTLAEMENLRKRTAREVSDARTYGISGF FT ARDVLEIADNLQRALDAVPADARAAPDPGLKALIEGVELTERSLHNALEKHGVKKFDPAGEKFDPNVHQAMYEVPDPSIP FT VGTVAQVIQAGYMIGERVLRPALVGVAKGGAKAAAPE*" FT gene 225153..225746 FT /locus_tag="Nwi_0195" FT /colour=9 FT CDS complement(225812..226750) FT /locus_tag="Nwi_0196" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q89WK3 Bll0679 protein. FT Bradyrhizobium japonicum., evalue=5e-90, 52% identity FT hit'" FT /note="KEGG top hit: 'bja:bll0679 category=Unassigned, FT evalue=3e-90, 52.302632% identity hit'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MRHFLHVFAILCLLSGANPSLASDVIYAPGSRIGLVPLIGLNPAKTFPGFETADQRVKVVVAELPAAAFRDVETVAKSNA FT VDPRGPKPQGLETASGQGYFIVESAKNGEDNVRRYSMVISGGTFSGYVAAQVPENVAKIYSDEAVQKMFATVALRKEVPL FT EEQLGLLPFKLSELSSFKLIRTLTPGAVILLSDAETENNIDSRAFIIISPIGSVPERPDDRSRFARDVAATIPNLREGRI FT TMSEPIRINGSPGFETRIDGTNTRTNTPVTVVQWLVFGSGKTAMRLIGSTPRSEWSDVFPRFRAVRDGIRPR* FT " FT gene complement(225812..226750) FT /locus_tag="Nwi_0196" FT /colour=13 FT sig_peptide complement(226682..226750) FT /colour=11 FT /locus_tag="Nwi_0196" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.999 atresidue 23" FT CDS 227144..229036 FT /locus_tag="Nwi_0197" FT /product="Heat shock protein Hsp70" FT /note="TIGRFAM: Heat shock protein Hsp70: (0)" FT /note="PFAM: Heat shock protein Hsp70: (0)" FT /note="SPTR top hit: 'P94317 Chaperone protein dnaK (Heat FT shock protein 70) (Heat shock 70 kDa protein) (HSP70). FT Bradyrhizobium japonicum., evalue=0.0, 94% identity hit'" FT /note="KEGG top hit: 'bja:blr0678 dnaK FT category=Unassigned, evalue=0.0, 94.117647% identity hit'" FT /note="COGs: 'evalue=0.0 score=712 category=O FT group=COG0443 Molecular chaperone'" FT /note="InterPro IPR001023" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MGKVIGIDLGTTNSCVAVMDGKTPKVIENAEGMRTTPSIVAFSDDGERLVGQPAKRQAVTNPERTIFAVKRLIGRRYDDP FT TVEKDKQLVPYKIAKAGNGDAWVEADGKTYSPSQISAFTLQKMKETAEAHLGQKVDQAVITVPAYFNDAQRQATKDAGKI FT AGLEVLRIINEPTAAALAYGLDKSKAGTIAVYDLGGGTFDVSVLEIGDGVFEVKSTNGDTFLGGEDFDMRLVNYLADEFQ FT KEQGINLRNDKLALQRLKEAAEKAKIELSSTTQTEINLPFITADQSGPKHLTMKLTRAKFEALVDDLVQKTIEPCRKALK FT DAGLTAGEIGEVVLVGGMTRMPKVQEVVKQLFGKEPHKGVNPDEVVAIGAAIQAGVLQGDVKDVLLLDVTPLSLGIETLG FT GVFTRIIDRNTTIPTKKSQVFSTAEDNQNAVTIRVFQGEREMAADNKILGQFDLMGIPPAPRGMPQIEVTFDIDANGIVN FT VSAKDKATGKEQQIRIQASGGLSEADIEKMVKDAEANAAEDKKRREAVDAKNQADSLVHSTEKALTEHGSKIEESERRAI FT EDAVSDLKEALKGDDAEAIKAKTNTLAQASMKLGEAMYKQQAEADAAKDAAKDDVVDAEFTEVDDDKKSA* FT " FT gene 227144..229036 FT /locus_tag="Nwi_0197" FT /colour=9 FT CDS 229185..230321 FT /locus_tag="Nwi_0198" FT /product="Heat shock protein DnaJ" FT /note="TIGRFAM: Heat shock protein DnaJ: (1.2e-192)" FT /note="PFAM: DnaJ central region: (1.5e-34) Heat shock FT protein DnaJ, N-terminal: (1.9e-36) Chaperone DnaJ, FT C-terminal: (1.1e-70)" FT /note="SMART: Heat shock protein DnaJ, N-terminal: FT (3.4e-31)" FT /note="SPTR top hit: 'P94319 Chaperone protein dnaJ. FT Bradyrhizobium japonicum., evalue=0.0, 86% identity hit'" FT /note="KEGG top hit: 'bja:blr0680 dnaJ FT category=Unassigned, evalue=0.0, 86.933333% identity hit'" FT /note="COGs: 'evalue=1.0e-134 score=473 category=O FT group=COG0484 DnaJ-class molecular chaperone with FT C-terminal Zn finger domain'" FT /note="InterPro IPR001305:IPR001623:IPR002939:IPR003095" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MSTKRCYYETLEVDRNADDTKLKAAFRKLAMKWHPDRNPGDSSSEMRFKEINEAYEVLKDSNKRAAYDRFGHAAFEQGGM FT GGGAAGFGAGFASSFSDIFEDLFGMSGQRGRSGGRERGGDLRYNMEITLEEAYHGKTAQIEIPVSVTCESCSGTGAKAGT FT KPKNCAMCGGAGRIRQAQGFFTLERTCPGCQGRGQMIEDPCPSCGGSGRVNRERSLSVNIPAGVEDGTRIRLAGEGEAGV FT RGGPPGDLYIFLSLIPHQFFQRDGADLHCRVPISMVAAALGGEIEVPTIDKGKTKVRVPSGTQSGRRFRIATKGMPVLRS FT RQTGDMYVQVVVETPQNLTKRQQDLLAEFEKLSSGETQPEAAGFFTKVKDFFGTRATP* FT " FT gene 229185..230321 FT /locus_tag="Nwi_0198" FT /colour=9 FT CDS 230415..231017 FT /locus_tag="Nwi_0199" FT /product="ribosomal RNA adenine methylase transferase" FT /note="SMART: Ribosomal RNA adenine methylase transferase: FT (5.2e-06)" FT /note="SPTR top hit: 'Q9LCT2 PpmtA protein (Phospholipid FT N-methyltransferase). Bradyrhizobium japonicum., FT evalue=3e-94, 86% identity hit'" FT /note="KEGG top hit: 'bja:blr0681 pmtA FT category=Unassigned, evalue=1e-94, 86.432161% identity FT hit'" FT /note="COGs: 'evalue=6e-40 score=157 category=I FT group=COG3963 Phospholipid N-methyltransferase'" FT /note="InterPro IPR000051:IPR001737" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=5 FT /translation="MPLQLSARASKKPLHLDDEVRFLRSWIEKPLHMGAVMPSGRILARTMAQYVDVASADPVIELGPGTGAITNALIEHGVDP FT KRLVLVEYDPGFCALLRDRYPQATVVQGDAYTLRDSLWNVLSARASAIVSGLPLVTKPMLTRLKLIRDAFATLAPGAPFV FT QFTYSVVPPIPKSLPGISTEASERIWMNLPPARVWVYRKR*" FT gene 230415..231017 FT /locus_tag="Nwi_0199" FT /colour=5 FT CDS 231103..231696 FT /locus_tag="Nwi_0200" FT /product="NADPH-dependent FMN reductase" FT /note="PFAM: NAD(P)H dehydrogenase (quinone): (9.4e-06) FT NADPH-dependent FMN reductase: (3.1e-25)" FT /note="SPTR top hit: 'Q9LCT1 Hypothetical protein (Blr0682 FT protein). Bradyrhizobium japonicum., evalue=6e-67, 67% FT identity hit'" FT /note="KEGG top hit: 'bja:blr0682 category=Unassigned, FT evalue=3e-67, 67.724868% identity hit'" FT /note="COGs: 'evalue=6e-28 score=117 category=R FT group=COG0431 flavoprotein'" FT /note="InterPro IPR003680:IPR005025" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MRSTGLFAPKILIIPGSLRTGSQNARLAAVIAKEFIRADVEVTRISLGDFPLPIYDADLQASAGVPASAVNLKQMIAAHH FT GVVIVTPEYNASLPPLLKNAIDWISRVQSPHEARGQVFHERAFAIASASTGRFGGARCLAQLRLILSVCGAMVIPNQLAL FT SFAGDAYDDMERLKRSADADALKKMVRQLITLAGNMQ*" FT gene 231103..231696 FT /locus_tag="Nwi_0200" FT /colour=11 FT CDS 231747..232613 FT /locus_tag="Nwi_0201" FT /EC_number="1.3.1.26" FT /product="dihydrodipicolinate reductase" FT /note="TIGRFAM: Dihydrodipicolinate reductase, bacterial: FT (1.9e-89)" FT /note="PFAM: Dihydrodipicolinate reductase: (4.7e-50) FT Dihydrodipicolinate reductase: (3.9e-70)" FT /note="SPTR top hit: 'Q89WK2 Dihydrodipicolinate reductase FT (EC 1.3.1.26) (DHPR). Bradyrhizobium japonicum., FT evalue=1e-117, 78% identity hit'" FT /note="KEGG top hit: 'bja:blr0685 dapB EC=1.3.1.26 FT category=Metabolism; Amino Acid Metabolism; Lysine FT biosynthesis [PATH:bja00300] , evalue=1e-118, 78.308824% FT identity hit'" FT /note="COGs: 'evalue=2e-80 score=292 category=E FT group=COG0289 Dihydrodipicolinate reductase'" FT /note="InterPro IPR000846:IPR011770" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=10 FT /translation="LPRNAAPAIPTEAFEDSAVADMRLIVAGAGGRMGRALVRAIAETDGAVLAGALEAPESELIGKDASVLAGLPASGIEVSA FT DLWSLSAKADGILDFTVPAATIANVAVAAERGLIHVIGTTGLSASDMAVIRSVTSRTAVVQSGNMSLGVNLLAALVKRMA FT QALDESFDVEVLEMHHRAKIDAPSGTALMLGQAAADGRKVGLDQRAVRGRDGLTGARKAGDIGFASLRGGTVSGDHSVIF FT AGPYERITLSHHAEDRMIFAHGALKAAKWAFGKEPGLYSMSDVLGLDV*" FT gene 231747..232613 FT /locus_tag="Nwi_0201" FT /colour=10 FT CDS 232780..233403 FT /locus_tag="Nwi_0202" FT /EC_number="5.4.2.1" FT /product="phosphoglycerate mutase 1" FT /note="TIGRFAM: Phosphoglycerate mutase 1: (4.3e-75)" FT /note="PFAM: Phosphoglycerate/bisphosphoglycerate mutase: FT (7.1e-49)" FT /note="SPTR top hit: 'Q89WK1 FT 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase FT (EC 5.4.2.1) (Phosphoglyceromutase) (PGAM) (BPG-dependent FT PGAM) (dPGM). Bradyrhizobium japonicum., evalue=3e-96, 83% FT identity hit'" FT /note="KEGG top hit: 'bja:blr0686 EC=5.4.2.1 FT category=Metabolism; Carbohydrate Metabolism; Glycolysis / FT Gluconeogenesis [PATH:bja00010] , evalue=2e-96, 83.495146% FT identity hit'" FT /note="COGs: 'evalue=5e-77 score=280 category=G FT group=COG0588 Phosphoglycerate mutase 1'" FT /note="InterPro IPR001345:IPR005952" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=4 FT /translation="MSERLLVLVRHGQSEWNLKNLFTGWKDPDLTELGAAEAKDAGRKLKAQGFVFDIAFTSTLIRAQHTLDLVLKELDQTGIP FT VRKDQALNERDYGDLSGLNKDEARKKWGDEQVLVWRRSYDVPPPGGESLKDTLARTLPYFVQEILPCVLRGECTLVAAHG FT NSLRALVMVLEKLSPEQILARELATGAPVIYRLNADATVASKLDLAA*" FT gene 232780..233403 FT /locus_tag="Nwi_0202" FT /colour=4 FT CDS complement(233410..234354) FT /locus_tag="Nwi_0203" FT /EC_number="2.1.1.63" FT /product="methylated-DNA-[protein]-cysteine FT S-methyltransferase" FT /note="TIGRFAM: Methylated-DNA-[protein]-cysteine FT S-methyltransferase: (2.2e-39)" FT /note="PFAM: Helix-turn-helix, AraC type: (0.047) FT Methylated-DNA-[protein]-cysteine S-methyltransferase: FT (6.5e-36)" FT /note="SMART: Helix-turn-helix, AraC type: (3.3e-13)" FT /note="SPTR top hit: 'Q89WK0 Transcriptional regulatory FT protein. Bradyrhizobium japonicum., evalue=1e-135, 78% FT identity hit'" FT /note="KEGG top hit: 'bja:bll0687 EC=2.1.1.63 FT category=Unassigned, evalue=1e-135, 78.145695% identity FT hit'" FT /note="COGs: 'evalue=2e-39 score=156 category=L FT group=COG0350 Methylated DNA-protein cysteine FT methyltransferase'" FT /note="InterPro IPR000005:IPR001497" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=2 FT /translation="VAGRRRTSYILAMMTLAKIPAPADSRMTQPDAPGAALRDYDAVRRAIAFISENWRSQPAIAATADAAGVTPDELHHLFRR FT WAGLTPKLFMQALTLDHAKRLLRKSASVLDAALDSGLSGPGRLHDLFVTHEAMSPGEWKNGGSGMKLAFGFHPSPFGIAI FT VIASDRGLAGLAFADGGDEQAALADMKRRWPNAAYVEDAARTGALAQRVFDTRLWRADQPLRVVLIGTDFEVRVWQTLLR FT IPMGKVTTYSTIAASIDRPTASRAVGAAVGKNPVSFVVPCHRVLGKSGALTGYHWGITRKHAMLGWEAGRIGLE* FT " FT gene complement(233410..234354) FT /locus_tag="Nwi_0203" FT /colour=2 FT CDS complement(234373..234897) FT /locus_tag="Nwi_0204" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q89WJ9 Bll0688 protein. FT Bradyrhizobium japonicum., evalue=2e-54, 59% identity FT hit'" FT /note="KEGG top hit: 'bja:bll0688 category=Unassigned, FT evalue=1e-54, 59.627329% identity hit'" FT /note="COGs: 'evalue=2e-38 score=151 category=S FT group=COG5488 Integral membrane protein'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MTVDNNLAGPGPAEQTLFSALLTPHRSLSHASFMVLMAVLALASFATGMVFLLMGAWPVFGFLGLDVLAIYWAFRINFQR FT ALATEEISITHSELRVRRTSHRGHIVEWVSNPLWVHVDQRVHEEYGIERLYLVSRGRRISIANFLGPDEKLSFVKALSSA FT LQLAKRGPIYNPVT*" FT gene complement(234373..234897) FT /locus_tag="Nwi_0204" FT /colour=13 FT misc_feature complement(join(234676..234732,234739..234804)) FT /colour=11 FT /locus_tag="Nwi_0204" FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 235058..235816 FT /locus_tag="Nwi_0205" FT /product="endonuclease III/Nth" FT /note="TIGRFAM: Endonuclease III/Nth: (7.3e-111)" FT /note="PFAM: Helix-hairpin-helix motif: (0.0098) HhH-GPD: FT (1.7e-19)" FT /note="SMART: HhH-GPD: (2.1e-51)" FT /note="SPTR top hit: 'Q89WJ8 Endonuclease III. FT Bradyrhizobium japonicum., evalue=1e-106, 76% identity FT hit'" FT /note="KEGG top hit: 'bja:blr0689 EC=4.2.99.18 FT category=Unassigned, evalue=1e-106, 76.923077% identity FT hit'" FT /note="COGs: 'evalue=4e-75 score=274 category=L FT group=COG0177 EndoIII-related endonuclease'" FT /note="InterPro IPR000445:IPR003265:IPR004035:IPR005759" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=2 FT /translation="VKKRTGKPPARQAEPVSGVRRAVKPARGPAELPPSLRPWTPAEVHEAFTRFRRANPEPKGELEHLNPFTLLVAVVLSAQA FT TDAGVNKATRALFAVADTPARMLALGEEKVRDYIKTIGLYRTKARNIIALSEKLLAEFDGAVPPSRAGIESLPGAGRKTA FT NVVLNMAFGERTMAVDTHVFRVANRTGMAPGKTPLEVELGLERVIPNQFMLHAHHWLILHGRYTCLARSPRCKVCLINDL FT CRWPEKTTEGAG*" FT gene 235058..235816 FT /locus_tag="Nwi_0205" FT /colour=2 FT CDS complement(236083..237786) FT /locus_tag="Nwi_0206" FT /product="Ribosomal protein S1" FT /note="TIGRFAM: Ribosomal protein S1: (1.8e-234)" FT /note="PFAM: RNA binding S1: (2.3e-11)" FT /note="SMART: RNA binding S1: (6.3e-16)" FT /note="SPTR top hit: 'Q6NDP1 Ribosomal protein S1. FT Rhodopseudomonas palustris., evalue=0.0, 94% identity FT hit'" FT /note="KEGG top hit: 'rpa:RPA0064 rpsA category=Genetic FT Information Processing; Translation; Ribosome FT [PATH:rpa03010] , evalue=0.0, 94.493783% identity hit'" FT /note="COGs: 'evalue=1.0e-163 score=567 category=J FT group=COG0539 Ribosomal protein S1'" FT /note="InterPro IPR000110:IPR003029" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=7 FT /translation="MASTDTLNPSRDDFAAMLDESFAGGSLQESSVIKGKVVAIEKDMAVIDVGLKTEGRVALREFSGPGRESTLKVGDEVEVF FT LDRIENALGEAVLSRDKARREESWGKLEKAFNNNEKVHGVIFNQVKGGFTVDLDGAVAFLPRSQVDIRPIRDVGPLMNNT FT QPFQILKMDRRRGNIVVSRRTVLEETRAEQRQELVQNLEEGQVIDGVVKNITDYGAFVDLGGIDGLLHVTDIAWRRVNHP FT TEVLAIGQTVKVKIIKINHETHRISLGMKQLLDDPWQGIEAKYPLGARFTGRVTNITDYGAFVELEPGIEGLIHVSEMSW FT TKKNMHPGKIVSTSQEVEVQVLEVDSVKRRISLGLKQTMRNPWEAFIEKHPVGSTVEGEVKNKTEFGLFLGLEGDVDGMV FT HLSDLDWKQPGEQVIDNFKRGDMVKAVVLDVDVEKERISLGVKQLEGDPFAEPGDVKKGAVVTCEVLEVKDGGIEVQISG FT TEFQTFIKRSELARDRNDQRTERFAVGEKVDARVIQFDKKARKVQVSIKALEVAEEKEAIAQYGSSDSGATLGDILGTVL FT KQRTDNK*" FT gene complement(236083..237786) FT /locus_tag="Nwi_0206" FT /colour=7 FT CDS complement(238140..238847) FT /locus_tag="Nwi_0207" FT /product="methyltransferase FkbM" FT /note="TIGRFAM: Methyltransferase FkbM: (1.1e-29)" FT /note="SPTR top hit: 'Q741Y7 Hypothetical protein. FT Mycobacterium paratuberculosis., evalue=2e-18, 31% FT identity hit'" FT /note="KEGG top hit: 'mpa:MAP0950c category=Unassigned, FT evalue=1e-18, 31.739130% identity hit'" FT /note="COGs: 'evalue=6e-04 score=38 category=R FT group=COG4798 methyltransferase'" FT /note="InterPro IPR006342" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MNARFVWRALKARWRDQRAELSVIGGHVRPGDTVCDVGAHKGSYVYWLSRWVGNSGRVLAFEPQPSLAAYLREVAPAHNV FT TVEQKALWSGSGVLDLAIPAIDSPGASLVAPVAGGTRMQVPVVALDDYLRPGQRVSLIKVDAEGAELAIFKGARRTLSEA FT RPWLIFECETRHLAETNVEDVFGLLDRLGYEGFFFRQGSLHPVSAFDPAIHQKQSGPRFWDHPDYCNNFLFKPRG* FT " FT gene complement(238140..238847) FT /locus_tag="Nwi_0207" FT /colour=13 FT CDS complement(238874..239512) FT /locus_tag="Nwi_0208" FT /EC_number="2.7.4.14" FT /product="cytidylate kinase" FT /note="TIGRFAM: Cytidylate kinase: (2.3e-52)" FT /note="PFAM: Cytidylate kinase region: (1e-31)" FT /note="SPTR top hit: 'Q89WF1 Cytidylate kinase (EC FT 2.7.4.14) (CK) (Cytidine monophosphate kinase) (CMP FT kinase). Bradyrhizobium japonicum., evalue=7e-85, 74% FT identity hit'" FT /note="KEGG top hit: 'bja:blr0739 cmk EC=2.7.4.14 FT category=Metabolism; Nucleotide Metabolism; Pyrimidine FT metabolism [PATH:bja00240] , evalue=4e-85, 74.407583% FT identity hit'" FT /note="COGs: 'evalue=1e-54 score=206 category=F FT group=COG0283 Cytidylate kinase'" FT /note="InterPro IPR003136:IPR011769:IPR011994" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=16 FT /translation="MIIAIDGPAASGKGTLGKRLAAHYHFRHLDTGVIYRAVAKALLDAGADPADEARAIAAALELDPERFGHPALKARAIGEA FT ASVVSTFPKVREALLTFQRQFAAEPPGAVLDGRDIGTVICPNADVKIFVEADPVVRARRRTLEARARGEEVDEAVVLADI FT LKRDERDRNRPVAPLKAAADAHVLDNSNLDIEAGLKAAIAIVESVRVRSGRA*" FT gene complement(238874..239512) FT /locus_tag="Nwi_0208" FT /colour=16 FT CDS complement(239509..240858) FT /locus_tag="Nwi_0209" FT /EC_number="2.5.1.19" FT /product="3-phosphoshikimate 1-carboxyvinyltransferase" FT /note="TIGRFAM: 3-phosphoshikimate FT 1-carboxyvinyltransferase: (1.3e-163)" FT /note="PFAM: EPSP synthase (3-phosphoshikimate FT 1-carboxyvinyltransferase): (2.2e-111)" FT /note="SPTR top hit: 'Q89WF2 3-phosphoshikimate FT 1-carboxyvinyltransferase (EC 2.5.1.19) (5- FT enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) FT (EPSPS). Bradyrhizobium japonicum., evalue=0.0, 81% FT identity hit'" FT /note="KEGG top hit: 'bja:blr0738 aroA EC=2.5.1.19 FT category=Metabolism; Amino Acid Metabolism; Phenylalanine, FT tyrosine and tryptophan biosynthesis [PATH:bja00400] , FT evalue=0.0, 81.291759% identity hit'" FT /note="COGs: 'evalue=1.0e-106 score=379 category=E FT group=COG0128 5-enolpyruvylshikimate-3-phosphate synthase' FT " FT /note="InterPro IPR001986:IPR006264" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=10 FT /translation="LTLSGQTMPLEARKCQSLTGRVRVPGDKSISHRALILGALAVGETRISGLLEGEDVLNTAKAMQALGAKVERRTDDNGGI FT AWSVRGVGTGGFATPEAPLDFGNSGTGCRLVMGAVAGCPIRAAFDGDGSLRSRPMRRILDPLELMGARVISQSDGGRLPL FT TLEGARDPLPIVYRTPVASAQIKSAVLLAGLSAPGVTTVIEREASRDHTELMLKHFGADIVSVAEGAHGRKISLTGQPEL FT HGAGVTVPADPSSAAFPIVAALITEGSDIVLDDVMTNPLRTGLFVTLREMGASIEESETRLDAGEPMAQLRVKASRLRGI FT EVPAERAPSMIDEYLVLAVAAAFAEGTTVMRGLRELRVKESDRLEAAAAMLRAGGVAVEIAGDDLIVEGRGRVPGGGLVT FT THMDHRIAMSALVMGCASDAPVKVDDIAFIATSFPDFVPMMQRLGANFA*" FT gene complement(239509..240858) FT /locus_tag="Nwi_0209" FT /colour=10 FT CDS 241005..241418 FT /locus_tag="Nwi_0210" FT /product="Conserved hypothetical protein FYDLN acid" FT /note="TIGRFAM: Conserved hypothetical protein FYDLN acid: FT (1.9e-63)" FT /note="SPTR top hit: 'Q89WF3 Bll0737 protein. FT Bradyrhizobium japonicum., evalue=2e-57, 84% identity FT hit'" FT /note="KEGG top hit: 'bja:bll0737 category=Unassigned, FT evalue=8e-58, 84.057971% identity hit'" FT /note="COGs: 'evalue=4e-11 score=60.4 category=S FT group=COG4530 Uncharacterized protein conserved in FT bacteria'" FT /note="InterPro IPR012644" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="VAKSELGTKRICPTTGKKFYDLNKNPVISPYTGEVVPIVVAPVRGRSDAARAAAASGAEATPEPAEAEEMVSLEEADAEE FT NTGKVKKAVVPESEDDIEIDDTLDDDEDDDSTFIADEEEGDEDVTDIIGDVGDDEET* FT " FT gene 241005..241418 FT /locus_tag="Nwi_0210" FT /colour=13 FT tRNA 241612..241687 FT /locus_tag="Nwi_R0004" FT /gene="tRNA-Ala1" FT /note="anticodon GGC, Cove Score=87.23" FT /product="tRNA_Ala" FT /colour=8 FT CDS 242018..242443 FT /locus_tag="Nwi_0211" FT /product="Heat shock protein Hsp20" FT /note="PFAM: Heat shock protein Hsp20: (6.9e-17)" FT /note="SPTR top hit: 'Q89WG1 Small heat shock protein. FT Bradyrhizobium japonicum., evalue=1e-71, 94% identity FT hit'" FT /note="KEGG top hit: 'bja:bll0729 hspH FT category=Unassigned, evalue=5e-72, 94.326241% identity FT hit'" FT /note="COGs: 'evalue=1e-18 score=85.8 category=O FT group=COG0071 Molecular chaperone (small heat shock FT protein)'" FT /note="InterPro IPR002068" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MSRVPSLSSPFLLGFDEIERALDRVVKGADGYPPYNIERCDRDSGEPERLRITLAVAGFTRDQLDVTIEENQLVIRGRQQ FT EDKARQYIHRGIAARHFQRTFVLAEGMLVLGADLKNGLLSIDLARPEPERVVKTIAINEHE* FT " FT gene 242018..242443 FT /locus_tag="Nwi_0211" FT /colour=9 FT CDS 242542..242808 FT /locus_tag="Nwi_0212" FT /product="Protein of unknown function DUF1150" FT /note="PFAM: Protein of unknown function DUF1150: FT (3.3e-46)" FT /note="SPTR top hit: 'Q89WG2 Bsl0728 protein. FT Bradyrhizobium japonicum., evalue=8e-32, 85% identity FT hit'" FT /note="KEGG top hit: 'bja:bsl0728 category=Unassigned, FT evalue=4e-32, 85.897436% identity hit'" FT /note="COGs: 'evalue=2e-17 score=80.8 category=S FT group=COG5568 Uncharacterized small protein'" FT /note="InterPro IPR009531" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MSEVISTIRPESVSTESLAQLGEGHIAYVKQVRSEDVPELFPQAPRIAPGLMLFALHAADGTPIMLTDSREAAVASAWSNELQAVSVH*" FT gene 242542..242808 FT /locus_tag="Nwi_0212" FT /colour=13 FT CDS 243124..244968 FT /locus_tag="Nwi_0213" FT /EC_number="4.2.1.9" FT /product="dihydroxy-acid dehydratase" FT /note="TIGRFAM: Dihydroxy-acid dehydratase: (0)" FT /note="PFAM: Dihydroxy-acid and 6-phosphogluconate FT dehydratase: (0)" FT /note="SPTR top hit: 'Q89LK8 Dihydroxy-acid dehydratase 1 FT (EC 4.2.1.9) (DAD 1). Bradyrhizobium japonicum., FT evalue=0.0, 82% identity hit'" FT /note="KEGG top hit: 'bja:bll4536 ilvD EC=4.2.1.9 FT category=Metabolism; Amino Acid Metabolism; Valine, FT leucine and isoleucine biosynthesis [PATH:bja00290] FT Metabolism; Metabolism of Cofactors and Vitamins; FT Pantothenate and CoA biosynthesis [PATH:bja00770] , FT evalue=0.0, 82.544861% identity hit'" FT /note="COGs: 'evalue=0.0 score=763 category=G FT group=COG0129 Dihydroxyacid dehydratase/phosphogluconate FT dehydratase'" FT /note="InterPro IPR000581:IPR004404" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=4 FT /translation="MPAYRSRTSTHGRNMAGARGLWRATGMKNEDFGKPIIAVVNSFTQFVPGHVHLKDLGQLVAREIEKAGGVAKEFHTIAVD FT DGIAMGHDGMLYSLPSREVIADSVEYMVNAHCADAMVCISNCDKITPGMLMASLRLNIPSVFVSGGPMESGKVTLNGKVK FT SVDLIDAMVAAADDSVSDADVEAIERSACPTCGSCSGMFTANSMNCLTEALGLALPGNGSVLATHADRKGLFVEAGHLIV FT DMARRYYEQNDERVLPRSVASFKAFENAMTLDISMGGSTNTVLHLLAAAYEGEVPFTMADIDRLSRRVPVLCKVAPSVAD FT VHLEDVHRAGGIMGILGELDRAGLIDASLPTVHSNSLREALERWDIKRTKSESVRTFYTAAPGGVRTEIAFSQDKRFEEL FT DADRAKGCIRDAEHAFSKDGGLAVLYGNIARDGCIVKTAGVDDSILTFSGPARVFESQDAAVDAILGNRIKPGDVVLIRY FT EGPRGGPGMQEMLYPTSYLKSKGLGKQCALITDGRFSGGSSGLSIGHVSPEAAEGGAIGLVEEGDLIAFDIPNRKVHLDV FT SDAELERRRAAMEAKGDKAWKPAAPRTRRITMALKAYAAHTTSAALGAVRVVKD*" FT gene 243124..244968 FT /locus_tag="Nwi_0213" FT /colour=4 FT CDS 245200..245520 FT /locus_tag="Nwi_0214" FT /product="transposase" FT /note="SPTR top hit: 'Q81ZK8 Transposase. Nitrosomonas FT europaea., evalue=2e-42, 71% identity hit'" FT /note="KEGG top hit: 'neu:NE2412 category=Unassigned, FT evalue=7e-43, 71.153846% identity hit'" FT /note="COGs: 'evalue=5e-09 score=52.8 category=L FT group=COG3293 Transposase and inactivated derivatives'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="LLPGKASDPGRTGSDNRLFVNGCLWVLRSGAHWCDLPERYGRWKTVHRRFSRWCHAGVWERVFSTLTADRDNQYLMLDST FT IVRAHQQAATGKGGPRIRRWGVPEVD*" FT gene 245200..245520 FT /locus_tag="Nwi_0214" FT /colour=11 FT CDS 245675..245902 FT /locus_tag="Nwi_0215" FT /product="transposase IS4 family" FT /note="SPTR top hit: 'Q82V79 Transposase IS4 family. FT Nitrosomonas europaea., evalue=2e-15, 55% identity hit'" FT /note="KEGG top hit: 'neu:NE2446 category=Unassigned, FT evalue=1e-15, 55.714286% identity hit'" FT /note="COGs: 'evalue=2e-05 score=41.2 category=L FT group=COG3293 Transposase and inactivated derivatives'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="LRALIAGMGAEAVIPSNRTRKIIIPHDAGLYKHRNRIERCFNRLKHFRRFATRYDRRTVHFTGFVHLAAALIWLP*" FT gene 245675..245902 FT /locus_tag="Nwi_0215" FT /colour=11 FT CDS complement(245916..246959) FT /locus_tag="Nwi_0216" FT /EC_number="6.1.1.2" FT /product="tryptophanyl-tRNA synthetase, class Ib" FT /note="TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib: FT (4.1e-113)" FT /note="PFAM: Aminoacyl-tRNA synthetase, class Ib: FT (1.4e-84)" FT /note="SPTR top hit: 'Q6NCL7 Trytophanyl-tRNA synthetase. FT Rhodopseudomonas palustris., evalue=1e-169, 84% identity FT hit'" FT /note="KEGG top hit: 'rpa:RPA0455 trpS EC=6.1.1.2 FT category=Metabolism; Amino Acid Metabolism; Tryptophan FT metabolism [PATH:rpa00380] Genetic Information Processing; FT Translation; Aminoacyl-tRNA biosynthesis [PATH:rpa00970] , FT evalue=1e-169, 84.393064% identity hit'" FT /note="COGs: 'evalue=1.0e-101 score=363 category=J FT group=COG0180 Tryptophanyl-tRNA synthetase'" FT /note="InterPro IPR001412:IPR002305:IPR002306" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=7 FT /translation="MTTRVFSGVQPTGNLHLGNYLGAIVNFVKLQADHECLYCVVDLHAITVPVAVWGGPDELRRATREVTAAFIASGIDPRQH FT IIFNQSQVAGHAELAWVLNCVARLGWLNRMTQFKEKAGKDRENASVGLYDYPVLMASDILVYRATHVPVGEDQKQHLELS FT RDIAQKFNNDFSESIAANGHGDMFFPLPEPVITGPATRVMSLRDGTKKMSKSDPSDYSRINLTDNADTIAQKIRKAKTDP FT EPLPSEEKGLENRPEADNLVGIYAALSGKPKSALLAEFGGAQFSSFKSSLVDLAVAKLSPIAHEMKRLTDDPAHVDRILI FT EGAERASAIASQTMDAVKDIVGFIRKR*" FT gene complement(245916..246959) FT /locus_tag="Nwi_0216" FT /colour=7 FT CDS complement(247059..248660) FT /locus_tag="Nwi_0217" FT /product="virulence factor MVIN-like" FT /note="TIGRFAM: Virulence factor MVIN-like: (1.4e-86)" FT /note="PFAM: Virulence factor MVIN-like: (2.1e-86)" FT /note="SPTR top hit: 'Q89W90 Bll0803 protein. FT Bradyrhizobium japonicum., evalue=1e-172, 64% identity FT hit'" FT /note="KEGG top hit: 'bja:bll0803 category=Unassigned, FT evalue=1e-173, 64.187867% identity hit'" FT /note="COGs: 'evalue=5e-72 score=265 category=R FT group=COG0728 Uncharacterized membrane protein putative FT virulence factor'" FT /note="InterPro IPR004268" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MALPCHQARYAGLAMIRSILTVSSGTLASRLLGFGRDALTAALLGAGPVADAFLMAFQFINVIRRMLGEGALNVALVPAW FT MRLREVSGLAAASAFAGDVLATVSATLIALAAVAGVAMPLLVGMLAPGFVGRESLQLAVTDARLMLPYLAFAGPAAVIMS FT LLNARHRFAIAAFSPLLFNVALILAAALLLWLQPDSQFAALVMAATVGIAGLLQLAVLALLTRRDDLASPLRISFGPGMR FT DFARKAVPGMIANSGPQLLIVAGAVVASMSPSGVSWLYFANRLIELPLGMVGVAIGTVLVPEMSRALSKDDRTAAVHAES FT RGIELAAALALPATLGLIVLSEPIVRVLFEHGAFTTADTRATALALGCLALGLPAHILIKALSPAFFARGDTMMPLIATL FT KGIAVAIVSAVALGWMVGVCGVALAMALGAWSSAASLARSMAAGFGFSIDTEARRRLPRITLAALVMGGVLWLALRLLAP FT ISGAHGLLQAATLIILIAAGVAVYGLLLLTFRVIDRNDIQTALARSHSGDLRA*" FT gene complement(247059..248660) FT /locus_tag="Nwi_0217" FT /colour=11 FT misc_feature complement(join(247128..247193,247224..247289,247386..247451,247497..247562,247626..247691,247821..247886,247995..248060,248091..248156,248172..248228,248274..248339,248481..248546,248559..248624)) FT /colour=11 FT /locus_tag="Nwi_0217" FT /note="12 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 248739..249740 FT /locus_tag="Nwi_0218" FT /EC_number="2.7.1.20" FT /product="PfkB" FT /note="PFAM: PfkB: (7.6e-45)" FT /note="SPTR top hit: 'Q6NCL5 Possible cabohydrate kinases. FT Rhodopseudomonas palustris., evalue=1e-149, 81% identity FT hit'" FT /note="KEGG top hit: 'rpa:RPA0457 category=Unassigned, FT evalue=1e-149, 81.681682% identity hit'" FT /note="COGs: 'evalue=4e-39 score=155 category=G FT group=COG0524 Sugar kinases ribokinase family'" FT /note="InterPro IPR002173:IPR011611" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=4 FT /translation="MAAAKYDVLAIGNAIFDVLVRTDEGFLAAHGMTKGGMALIDEARAASIYADMGPATEMSGGSAANTIVGLAGFGARTAYV FT GKVKDDQIGRLYIHDIRAAKVAFDTPPASDGPATGCSYILVTPDGERTMNTYLGAAQDLSSADIDPDAVAASSILYLEGY FT LWDPKAAKEAFLKASRIAHDAGRQVALTLSDAFCVDRYRDEFLALMRDGTVDLIFANESELHSLYQTSDFDTALAQLRQD FT IALGVVTRSEKGCVVATEGGVVAVPACPIDNLVDTTGAGDLFAAGFLFGLVRGASHEDAGRLGALAAAEVIQHIGARPQV FT SLKELAQANRLPV*" FT gene 248739..249740 FT /locus_tag="Nwi_0218" FT /colour=4 FT CDS complement(249826..250746) FT /locus_tag="Nwi_0219" FT /product="pirin" FT /note="PFAM: Pirin, N-terminal: (6.9e-52) Pirin, FT C-terminal: (5.3e-44)" FT /note="SPTR top hit: 'Q89W80 Bll0813 protein. FT Bradyrhizobium japonicum., evalue=1e-152, 82% identity FT hit'" FT /note="KEGG top hit: 'bja:bll0813 category=Unassigned, FT evalue=1e-152, 82.950820% identity hit'" FT /note="COGs: 'evalue=3e-68 score=251 category=R FT group=COG1741 Pirin-related protein'" FT /note="InterPro IPR003829:IPR008778" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MSWLPSNDPALGDPQSCDALELVIIPRVRDLGDGFAVRRALPHGRRQMVGPFIFFDHFGPIQFVSGKGMDVRPHPHIGLA FT TVTYLFDGSIMHRDSEGHIQEIQPGAMNLMTAGSGIAHSERTPDAQRASGQAMLGLQSWIALPKGKEEIAPTFQHYGADS FT LPTVQDKGFRARVIAGRSFGATSPVEMVSPWFYAEVALEAGMSAPLDADHEERAIYIVDGEVEIAGDRHQAPQLLVFRPG FT DRITVRATQPTRMMFLGGDALEGPRHIWWNFVSSSKERIEQAKEDWKTGRFAPVPNEHEFIPLPEN* FT " FT gene complement(249826..250746) FT /locus_tag="Nwi_0219" FT /colour=11 FT CDS complement(250980..251510) FT /locus_tag="Nwi_0220" FT /product="hypothetical protein" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=0 FT /translation="MPVLRYFVVMGCCLMGLLYAVDLMWPGEREAKVDYYSTPVVVAKPSSAESGFASRIERAVGETETPGSMENRRYPGQRFE FT RTKQDSRPVVYPNIATLAPTPHRLQWERQLRYLPANHVYEARAEMPKEAIPEQPKPTARAATRKQLAHARPARIAPDFER FT PRYARNAGWDPFGLFD*" FT gene complement(250980..251510) FT /locus_tag="Nwi_0220" FT /colour=0 FT sig_peptide complement(251448..251510) FT /colour=11 FT /locus_tag="Nwi_0220" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.871) with cleavage site probability FT 0.870 atresidue 21" FT CDS complement(251695..253122) FT /locus_tag="Nwi_0221" FT /product="peptidase U62, modulator of DNA gyrase" FT /note="PFAM: Peptidase U62, modulator of DNA gyrase: FT (6e-66)" FT /note="SPTR top hit: 'Q6NBK3 TldD protein, suppresses FT inhibitory activity of CsrA. Rhodopseudomonas palustris., FT evalue=0.0, 89% identity hit'" FT /note="KEGG top hit: 'rpa:RPA0825 category=Unassigned, FT evalue=0.0, 89.052632% identity hit'" FT /note="COGs: 'evalue=1.0e-113 score=402 category=R FT group=COG0312 Zn-dependent proteases and their inactivated FT homologs'" FT /note="InterPro IPR002510" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MTSPITASLLDRAHLDRDSVRHEIARGLRGADDGELFLEYSQSEALMFDNGRLKQATYDTSQGFGLRAVKDDAVGYAHSS FT DVSLAALIRAADAVGAVRGGYQGAFAVAPGHTNVRLYGDDNPLDGLGFETKVKLLAEIDAYVRDRDPRVRQVSVSLGATW FT QVVEIMRPDGETYRDIRPLVRVNISVVAGQGDRQETGSKGYGGREGYARFVESKAWREVADGAIRQALINLESIPAPAGE FT MDVVLGPGWPGVMLHEAVGHGLEGDFNRKKTSAFAGLMGQQVAAKGVTVVDDGTISARRGSLSIDDEGTPTSRTVLIEDG FT ILVGYMQDRQNARLMGMKPTGNGRRQDYAHVPMPRMTNTYMPAGDRDPAEILASVKNGIYAVNFGGGQVDITSGKYVFQC FT TEAYRIENGKVGAPLKGAMLIGNGPTDLHRITMIGNDVALDDGVGTCGKNGQGVPVGVGQPTLRMERITVGGTGG* FT " FT gene complement(251695..253122) FT /locus_tag="Nwi_0221" FT /colour=11 FT CDS complement(253282..253869) FT /locus_tag="Nwi_0222" FT /product="invasion associated locus B" FT /note="PFAM: Invasion associated locus B: (6.1e-60)" FT /note="SPTR top hit: 'Q6NBJ8 Hypothetical protein. FT Rhodopseudomonas palustris., evalue=4e-79, 86% identity FT hit'" FT /note="KEGG top hit: 'rpa:RPA0830 category=Unassigned, FT evalue=2e-79, 86.285714% identity hit'" FT /note="COGs: 'evalue=6e-39 score=153 category=R FT group=COG5342 Invasion protein B involved in pathogenesis' FT " FT /note="InterPro IPR010642" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MVESRGSTRMEASKQHIGYASSSRRTARRQPLRILACGAAALLVAGFASAAKAQGAVKSVHGDWQIRCDTPPGAKAEQCA FT LIQSVVAEDRSNAGLTVIVLKTADQKSRLMRVVAPLGVLLPSGLGLKLDNADVGRAGFVRCLPNGCVAEVVLDDKLLGQL FT RSAKTATFIIFETPEEGIGFPLSLNGLGEGYDKLP*" FT gene complement(253282..253869) FT /locus_tag="Nwi_0222" FT /colour=11 FT sig_peptide complement(253708..253869) FT /colour=11 FT /locus_tag="Nwi_0222" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.999) with cleavage site probability FT 0.696 atresidue 54" FT misc_feature complement(253717..253773) FT /colour=11 FT /locus_tag="Nwi_0222" FT /note="1 probable transmembrane helix predicted FT byTMHMM2.0" FT CDS 254299..255156 FT /locus_tag="Nwi_0223" FT /EC_number="1.9.3.1" FT /product="cytochrome c oxidase, subunit II" FT /note="PFAM: Cytochrome c oxidase, subunit II: (3.4e-58) FT Cytochrome C oxidase subunit II, transmembrane region: FT (6.7e-27)" FT /note="SPTR top hit: 'Q59630 Cytochrome-c oxidase subunit FT II precursor (EC 1.9.3.1). Nitrobacter winogradskyi FT (Nitrobacter agilis)., evalue=1e-161, 99% identity hit'" FT /note="KEGG top hit: 'bja:blr1170 coxB EC=1.9.3.1 FT category=Metabolism; Energy Metabolism; Oxidative FT phosphorylation [PATH:bja00190] , evalue=1e-116, FT 71.228070% identity hit'" FT /note="COGs: 'evalue=6e-54 score=204 category=C FT group=COG1622 Heme/copper-type cytochrome/quinol oxidases FT subunit 2'" FT /note="InterPro IPR001505:IPR002429:IPR011759" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=3 FT /translation="MKMSMGQYGRRFGRRFLGLAFGGAAFAAGGAAFAADEIGQPHAWGFDLQQGVTPVMESIARMHNGLLVVITLITLFVTAL FT LVVAMVRFNARSNPVPSKTTHNTMIEVAWTIIPVLILVGIAVPSFRLLFEQLDLPKADLTVKATGKQWYWTYTYPDNGKF FT EFDSLLAQDKKPRLLAVDNELVVPVNKVVRVQVIGADVIHSFGVPSFGMKVDAIPGRLNETWFKATKTGIFYGQCSELCG FT RDHAFMPIAVRVVSEQEFAAWVEVAKKKFASNPANAVASAAGVMQ*" FT sig_peptide 254299..254403 FT /colour=11 FT /locus_tag="Nwi_0223" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.999 atresidue 35" FT gene 254299..255156 FT /locus_tag="Nwi_0223" FT /colour=3 FT misc_feature join(254332..254400,254488..254556,254617..254685) FT /colour=11 FT /locus_tag="Nwi_0223" FT /note="3 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 255257..256876 FT /locus_tag="Nwi_0224" FT /EC_number="1.9.3.1" FT /product="cytochrome c oxidase, subunit I" FT /note="PFAM: Cytochrome c oxidase, subunit I: (1.3e-300)" FT /note="SPTR top hit: 'Q59631 Cytochrome-c oxidase sbunit I FT (EC 1.9.3.1). Nitrobacter winogradskyi (Nitrobacter FT agilis)., evalue=0.0, 99% identity hit'" FT /note="KEGG top hit: 'bja:blr1171 coxA EC=1.9.3.1 FT category=Metabolism; Energy Metabolism; Oxidative FT phosphorylation [PATH:bja00190] , evalue=0.0, 82.624769% FT identity hit'" FT /note="COGs: 'evalue=1.0e-166 score=578 category=C FT group=COG0843 Heme/copper-type cytochrome/quinol oxidases FT subunit 1'" FT /note="InterPro IPR000883" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=3 FT /translation="MATASAHDHAHDDHGDHAHHPTGWKRFAYSTNHKDIGTMYLVFAIVAGIIGGLMSMGIRAELMYPGIQVFDPAHTYNVFA FT TNHGLIMIFFMVMPAMIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPAAFALLLISSFMEGEPGATGAGTGWTLYAPLS FT TSGHPGPAVDFSILSIHLAGASSILGAINFITTIFNMRAPGMTMHKMPLFVWSILVTVFLLLLSLPVLAGAITMLLTDRN FT FGTTFFAADGGGDPVLFQHLFWFFGHPEVYILILPGFGMISHVISTFSKKPIFGYLGMAYAMVAIGGIGFVVWAHHMYTV FT GMVSSAQAYFVAATMVIAVPTGVKVFSWIATMWGGSIEFKTPMLFAIGFIFLFTVGGVTGVVLANAGVDRVMQETYYVIA FT HFHYVMGIAAVFAIFSGWYYWFPKMSGYMYNETIGKLHFWVMFIGANILFFPQHFLGLQGMMRRMVDYPDAFAGWNEISS FT YGAFITGFGVIIFLYGLVDAFARKQQAADNPWGEGATTLEWTLSSPPPFHQFSTLPKVQ* FT " FT gene 255257..256876 FT /locus_tag="Nwi_0224" FT /colour=3 FT misc_feature join(255362..255430,255509..255577,255614..255682,255773..255841,255878..255946,256040..256108,256127..256195,256238..256306,256340..256408,256451..256519,256556..256624,256682..256750) FT /colour=11 FT /locus_tag="Nwi_0224" FT /note="12 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 256939..257877 FT /locus_tag="Nwi_0225" FT /product="protoheme IX farnesyltransferase" FT /note="TIGRFAM: Protoheme IX farnesyltransferase: FT (6.2e-120)" FT /note="PFAM: UbiA prenyltransferase: (7.5e-87)" FT /note="SPTR top hit: 'Q51322 Heme O synthase. Nitrobacter FT winogradskyi (Nitrobacter agilis)., evalue=1e-172, 98% FT identity hit'" FT /note="KEGG top hit: 'bja:blr1172 coxE EC=2.5.1.- FT category=Metabolism; Energy Metabolism; Oxidative FT phosphorylation [PATH:bja00190] , evalue=1e-141, FT 82.258065% identity hit'" FT /note="COGs: 'evalue=7e-81 score=294 category=O FT group=COG0109 Polyprenyltransferase (cytochrome oxidase FT assembly factor)'" FT /note="InterPro IPR000537:IPR006369" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="VSVVDQKAVELPPRISEAGVADYFALLKPRVMSLVIFTALVGLMIAPGHIHPVLGFIAILCIAVGAGASGALNMALEGDI FT DVLMSRTANRPIPRGRITRGEAMGFGLTLSFFSVMTLGALVNWYAGGLLAFTIFFYVVIYTMGLKRRTAQNIVIGGAAGA FT LPPVVAWAAATGSLSVEPLLLFLIIFFWTPPHFWALALFRSDDYARAGVPMLPVVAGPDATRLQILLYTIVLVAIAAAPW FT PLGYFDWVYGVTSLILGAGMLVLAIEVYRHRTGSQALRATRRLFAFSILYLFALFAVLLLDVVAKAVAPLIW* FT " FT gene 256939..257877 FT /locus_tag="Nwi_0225" FT /colour=9 FT misc_feature join(257029..257088,257098..257166,257227..257295,257305..257358,257392..257460,257473..257532,257611..257664,257677..257745,257782..257850) FT /colour=11 FT /locus_tag="Nwi_0225" FT /note="9 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 257894..258064 FT /locus_tag="Nwi_0226" FT /product="CoxF protein" FT /note="SPTR top hit: 'Q9RM97 Hypothetical protein coxF. FT Bradyrhizobium japonicum., evalue=9e-15, 78% identity FT hit'" FT /note="KEGG top hit: 'bja:bsr1173 coxF FT category=Unassigned, evalue=4e-15, 78.846154% identity FT hit'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MDSNDKPAGDRIVLTEAQKKRRRERSIAIACALGVLVLLFFAVTFIKGPGVLVRPV*" FT gene 257894..258064 FT /locus_tag="Nwi_0226" FT /colour=11 FT misc_feature 257972..258031 FT /colour=11 FT /locus_tag="Nwi_0226" FT /note="1 probable transmembrane helix predicted FT byTMHMM2.0" FT CDS 258071..258712 FT /locus_tag="Nwi_0227" FT /product="Cytochrome c oxidase assembly protein FT CtaG/Cox11" FT /note="PFAM: Cytochrome c oxidase assembly protein FT CtaG/Cox11: (8.8e-82)" FT /note="SPTR top hit: 'Q6NBJ3 Possible cytochrome-c oxidase FT assembly protein. Rhodopseudomonas palustris., FT evalue=6e-73, 65% identity hit'" FT /note="KEGG top hit: 'rpa:RPA0835 coxG FT category=Metabolism; Energy Metabolism; Oxidative FT phosphorylation [PATH:rpa00190] , evalue=3e-73, 65.876777% FT identity hit'" FT /note="COGs: 'evalue=2e-54 score=205 category=O FT group=COG3175 Cytochrome oxidase assembly factor'" FT /note="InterPro IPR007533" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MTDASQHQQSAAPALPKAAPRIGRDVKVGAACGLVVALMLGAAYASVPFYDWFCRVTGFNGTTQVAGSAPQAEPLARTVT FT VRFDSNVSGGLPWKFEAEQTAIEVRVGEVTTVHYAITNESASPTTGQAAYNVTPLAVGSYFTKINCFCFTEQTLAPGEKR FT EMAVVFYVDQAFAADKEYDGVNTITLSYTFFPVKNAAPRPVAANEPDRPGGSI*" FT gene 258071..258712 FT /locus_tag="Nwi_0227" FT /colour=9 FT misc_feature 258152..258220 FT /colour=11 FT /locus_tag="Nwi_0227" FT /note="1 probable transmembrane helix predicted FT byTMHMM2.0" FT CDS 258809..259663 FT /locus_tag="Nwi_0228" FT /EC_number="1.9.3.1" FT /product="cytochrome c oxidase, subunit III" FT /note="PFAM: Cytochrome c oxidase, subunit III: FT (1.5e-143)" FT /note="SPTR top hit: 'Q6NBJ2 Cytochrome c oxidase subunit FT III. Rhodopseudomonas palustris., evalue=1e-147, 82% FT identity hit'" FT /note="KEGG top hit: 'rpa:RPA0836 coxC EC=1.9.3.1 FT category=Metabolism; Energy Metabolism; Oxidative FT phosphorylation [PATH:rpa00190] , evalue=1e-147, FT 82.978723% identity hit'" FT /note="COGs: 'evalue=2e-43 score=169 category=C FT group=COG1845 Heme/copper-type cytochrome/quinol oxidase FT subunit 3'" FT /note="InterPro IPR000298" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=3 FT /translation="MATAQVKHDYHLVDPSPWPIVGATAAFIMAVGAILWMHHMTAAAPIIFGIGVVGVLYTMASWWADVIREAEHKGDHTRVV FT QISHRYGMILFITSEVMFFVAWFWAFFNSALFPGDPVHVTREALFGGVWPPKGIQTFDPWHLPLLNTLILLTSGTTVTWA FT HHALLNGDRKGLKWGLILTIALGAIFTCVQAYEYQHAAFSFAGNVYGATFFMATGFHGFHVLVGTIFLIVCLFRANAGHF FT TPSQHLGFEFAAWYWHFVDVVWLFLFVCIYIWGNGAAAMAHAAH*" FT gene 258809..259663 FT /locus_tag="Nwi_0228" FT /colour=3 FT misc_feature join(258866..258919,258932..259000,259061..259129,259235..259303,259322..259390,259433..259501,259559..259627) FT /colour=11 FT /locus_tag="Nwi_0228" FT /note="7 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 259851..261269 FT /locus_tag="Nwi_0229" FT /EC_number="4.2.3.1" FT /product="threonine synthase" FT /note="TIGRFAM: Threonine synthase: (4.7e-82)" FT /note="PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta FT subunit: (5.6e-17)" FT /note="SPTR top hit: 'Q89V75 Threonine synthase. FT Bradyrhizobium japonicum., evalue=0.0, 80% identity hit'" FT /note="KEGG top hit: 'bja:blr1181 thrC EC=4.2.3.1 FT category=Metabolism; Amino Acid Metabolism; Glycine, FT serine and threonine metabolism [PATH:bja00260] FT Metabolism; Metabolism of Cofactors and Vitamins; Vitamin FT B6 metabolism [PATH:bja00750] , evalue=0.0, 80.296610% FT identity hit'" FT /note="COGs: 'evalue=3e-89 score=322 category=E FT group=COG0498 Threonine synthase'" FT /note="InterPro IPR000634:IPR001926:IPR004450" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=10 FT /translation="LTHYLSTRGENQKLGFSDVMLAGLARDGGLYVPEVWPQLRLDTVAAFFGRPYSEVAVEVIRPFVGGDIADVDLARMANEA FT YATFRHPAVVPLDQIGSQQFLLELFHGPTLAFKDVAMQLLSRLMDHVLARRGQRTTIVVATSGDTGGAAVDAFANRANVD FT LIALFPDGRISEVQRRMMTTTAAPNVHALAVKGTFDDCQAIVKGLFNNHRFRDEVSLSGVNSINWARIVAQVVYYFTSAV FT ALGAPARAVDFTVPTGNFGDIFAGYVAKRMGLPVRRLRIAANINDILPRTLKTGIYEVREVHATSSPSMDIQVSSNFERL FT LFEATGRDAAQVRALMASLQQSGRFALPESVLAAMRADFDAECADETETAATIRTAWREAGDLLDPHTAVALTVADRDAA FT ESRVPNIVLATAHAAKFPDAVEAACGVRPPLPAWLDGLMTRPERITIVNNDQAEIERFVLSVSRAANHGVTG* FT " FT gene 259851..261269 FT /locus_tag="Nwi_0229" FT /colour=10 FT CDS 261266..262555 FT /locus_tag="Nwi_0230" FT /EC_number="3.4.24.64" FT /product="peptidase M16" FT /note="PFAM: Peptidase M16, C-terminal: (4e-54) Peptidase FT M16, N-terminal: (3e-46)" FT /note="SPTR top hit: 'Q89V74 Mitochondrial processing FT peptidase-like protein. Bradyrhizobium japonicum., FT evalue=0.0, 81% identity hit'" FT /note="KEGG top hit: 'bja:blr1182 mpp EC=3.4.99.- FT category=Unassigned, evalue=0.0, 81.118881% identity hit'" FT /note="COGs: 'evalue=2e-91 score=329 category=R FT group=COG0612 Zn-dependent peptidases'" FT /note="InterPro IPR001431:IPR007863:IPR011765" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MSVNVTKLSSGLTVVTDDMPHLETAALGVWTGVGGRDEKPDEHGISHLLEHMAFKGTTTRSSRAIAEEIEAVGGDLNAAT FT GVETTAYYARVMKADVPLALDVLSDILSNPIFDAKELECEKGVIEQEIGAAQDTPDDVVFEQLNELCYPDQPIGRSLLGT FT PETLERFNSDMLHGYLKTHYRGPDMVVAAAGAIEHGMVVAEVERRFAGFDAAPPPQPAAATFGHGGSRVVHRDLEQAHLT FT LALEGVPQTDGSLFSLQVFTSVLGGGMSSRLFQEVREKRGLCYSIYTFHAPYADTGLFGLYTGTDPSDAPEMMEVIVDVI FT SEAVETLTEAEIARAKAQMKAGLLMALESCSARAEQLARHMLVYGRPQSVGELTARIDAVSVESTRDAARGLLARSRPAV FT VALGSGRGLDSAVAFAEGLAQSKARILLH*" FT gene 261266..262555 FT /locus_tag="Nwi_0230" FT /colour=11 FT CDS 262732..263316 FT /locus_tag="Nwi_0231" FT /product="GCN5-related N-acetyltransferase" FT /note="PFAM: GCN5-related N-acetyltransferase: (1.4e-09)" FT /note="SPTR top hit: 'Q89V73 Ribosomal-protein-alanine FT N-acetyltransferase. Bradyrhizobium japonicum., FT evalue=6e-93, 82% identity hit'" FT /note="KEGG top hit: 'bja:blr1183 rimJ EC=2.3.1.128 FT category=Unassigned, evalue=3e-93, 82.989691% identity FT hit'" FT /note="COGs: 'evalue=2e-26 score=112 category=J FT group=COG1670 Acetyltransferases including N-acetylases of FT ribosomal proteins'" FT /note="InterPro IPR000182" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=7 FT /translation="MALFRLSSSAPALAPRGHGLFLRAPEMSDFLQWRQLRECSRAYLTPWEPIWPADDLTRAGFRRRLRRYAEDIADDRSYPF FT IVFRESDGVMLGGITLANVRRGIAQAGTIGYWIGQPHAGQGYMTAALRVLLPALFGELNLHRIEAACIPSNAPSIRVLDK FT CGFTREGLARRYLRINGIWQDHLLFGVLHDDLRS*" FT gene 262732..263316 FT /locus_tag="Nwi_0231" FT /colour=7 FT CDS complement(263471..264112) FT /locus_tag="Nwi_0232" FT /product="probable ISRm2011-2 transposase protein" FT /note="SPTR top hit: 'Q925Z7 TRANSPOSASE FOR INSERTION FT SEQUENCE ELEMENT ISRM11/ISRM2011-2 (TRANSPOSASE FOR FT ISRM11/ISRM2011-2 PROTEIN) (Probable ISRm2011-2 FT transposase protein, C-terminal portion) (Fragment). FT Rhizobium meliloti (Sinorhizobium mel-TRUNCATED-, FT evalue=1e-74, 64% identity hit'" FT /note="KEGG top hit: 'sme:SMb20304 category=Unassigned, FT evalue=6e-75, 64.000000% identity hit'" FT /note="COGs: 'evalue=1e-09 score=56.6 category=L FT group=COG3335 Transposase and inactivated derivatives'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="VGVRSRCEAQLQKKTLIAAEQDRPDVARRRAQWTKYRDRIDPTRLVFIDETWTKTNMAPLRGWAPRGQRIRAKVPHGRWQ FT TMTFMAALRHDRITAPWFIEGPINGEAFLLYIEKVLVPTLRHGDIVIMDNLGSHKASAVRRVIRAAGARLFYLPKYSPDL FT NPIEQFFAKFKHWLRKAAQRTTEAVYNAIAPILETVAPAECANYFVNAGYNQI*" FT gene complement(263471..264112) FT /locus_tag="Nwi_0232" FT /colour=11 FT CDS complement(264064..264414) FT /locus_tag="Nwi_0233" FT /product="transposase" FT /note="SPTR top hit: 'Q989K7 Transposase. Rhizobium loti FT (Mesorhizobium loti)., evalue=4e-41, 69% identity hit'" FT /note="KEGG top hit: 'mlo:mll6383 category=Unassigned, FT evalue=2e-41, 69.230769% identity hit'" FT /note="COGs: 'evalue=2e-23 score=101 category=L FT group=COG3415 Transposase and inactivated derivatives'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=2 FT /translation="MGRAYSNDLRERVVRAVVKGGLSRHQAAAQFGVGISTAINWVQRFHETGSVAPSQIGGYRPKKIAGPHREWLLQRCRKDF FT TVRGLVAELAERGLKVDYRTMWEFVHAVKLSYKKRR*" FT gene complement(264064..264414) FT /locus_tag="Nwi_0233" FT /colour=2 FT CDS 264612..265322 FT /locus_tag="Nwi_0234" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q6NBI6 Hypothetical protein FT precursor. Rhodopseudomonas palustris., evalue=2e-54, 52% FT identity hit'" FT /note="KEGG top hit: 'rpa:RPA0842 category=Unassigned, FT evalue=1e-54, 52.884615% identity hit'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MLDVADTAEGEPGAAGRFRCFPWGGLFLSRFSSLMTMVAVCCTVAAFPVQSQSLGDRFKGMFGIRSQPEQTAPAPGDTAS FT VPDYLTCPSVAIRSGASTYAVGESGKPATGAEVRYQATIRDTARECDYNSDTQQISVKVGIRGRVIVGPAGAPPTVEVPL FT RVAVVEDGISPKTIATNAYTITVSLSDSGGGIYSFVSDDLSYPAPQGAAADRYVFYVGFDPQALKPEPRMNRRRQR* FT " FT gene 264612..265322 FT /locus_tag="Nwi_0234" FT /colour=13 FT misc_feature 264690..264758 FT /colour=11 FT /locus_tag="Nwi_0234" FT /note="1 probable transmembrane helix predicted FT byTMHMM2.0" FT CDS complement(265711..266196) FT /locus_tag="Nwi_0235" FT /product="H+-transporting two-sector ATPase, B/B' subunit" FT /note="PFAM: H+-transporting two-sector ATPase, B/B' FT subunit: (1.4e-23)" FT /note="SPTR top hit: 'Q6NBI5 Putative Fo ATP synthase B FT chain. Rhodopseudomonas palustris., evalue=9e-62, 77% FT identity hit'" FT /note="KEGG top hit: 'rpa:RPA0843 atpF1 EC=3.6.3.14 FT category=Metabolism; Energy Metabolism; Oxidative FT phosphorylation [PATH:rpa00190] Metabolism; Energy FT Metabolism; ATP synthesis [PATH:rpa00193] , evalue=5e-62, FT 77.639752% identity hit'" FT /note="COGs: 'evalue=1e-12 score=66.0 category=C FT group=COG0711 F0F1-type ATP synthase subunit b'" FT /note="InterPro IPR002146" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=3 FT /translation="MLAEPETWVAIAFLLLMGVFAYVGVHRTVLSALDRRSARIKNELDDARRLKDEAAKLLADYKARHASAEREAQDIIASAR FT AEAERIAAEAKAKMEDFVARRTKSAEGKIASAEAQAIADVRAAAADAAVAAASSILSNSVKGQLADELLVQGVSEVRSKL FT N*" FT gene complement(265711..266196) FT /locus_tag="Nwi_0235" FT /colour=3 FT misc_feature complement(266110..266175) FT /colour=11 FT /locus_tag="Nwi_0235" FT /note="1 probable transmembrane helix predicted FT byTMHMM2.0" FT CDS complement(266205..266762) FT /locus_tag="Nwi_0236" FT /product="H+-transporting two-sector ATPase, B/B' subunit" FT /note="PFAM: H+-transporting two-sector ATPase, B/B' FT subunit: (1.2e-12)" FT /note="SPTR top hit: 'Q6NBI4 Putative FoF1 ATP synthase, FT subunit B'. Rhodopseudomonas palustris., evalue=6e-73, 77% FT identity hit'" FT /note="KEGG top hit: 'rpa:RPA0844 atpF2 EC=3.6.3.14 FT category=Metabolism; Energy Metabolism; Oxidative FT phosphorylation [PATH:rpa00190] Metabolism; Energy FT Metabolism; ATP synthesis [PATH:rpa00193] , evalue=3e-73, FT 77.837838% identity hit'" FT /note="COGs: 'evalue=1e-13 score=70 category=C FT group=COG0711 F0F1-type ATP synthase subunit b'" FT /note="InterPro IPR002146" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=3 FT /translation="VAESHGNAHGATAHTEADGGHKAPFPPFQKETFASQLVSLTIAFVALYLISSRLALPRVRQTIDDRENTIKGDLAQAQKL FT KDDSDAALKAYEAELAAARARAQAIGNETREKLNAAAEAERKALEERLSVKLADAEKTIASTRAAAMSNVRGIASDAATA FT IVQQLTGATPDSKLVDSAVDASMKG*" FT gene complement(266205..266762) FT /locus_tag="Nwi_0236" FT /colour=3 FT misc_feature complement(266595..266660) FT /colour=11 FT /locus_tag="Nwi_0236" FT /note="1 probable transmembrane helix predicted FT byTMHMM2.0" FT CDS complement(266826..267053) FT /locus_tag="Nwi_0237" FT /product="H+-transporting two-sector ATPase, C subunit" FT /note="PFAM: H+-transporting two-sector ATPase, C subunit: FT (3.5e-19)" FT /note="SPTR top hit: 'Q6NBI3 Probable ATP synthase subunit FT C TRANSMEMBRANE protein. Rhodopseudomonas palustris., FT evalue=6e-35, 100% identity hit'" FT /note="KEGG top hit: 'rpa:RPA0845 atpE EC=3.6.3.14 FT category=Metabolism; Energy Metabolism; Oxidative FT phosphorylation [PATH:rpa00190] Metabolism; Energy FT Metabolism; ATP synthesis [PATH:rpa00193] , evalue=3e-35, FT 100.000000% identity hit'" FT /note="InterPro IPR000454:IPR002379" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=3 FT /translation="MDPIAAKYIGAGIACIGMGGAGAGVGIIFGNYLAAAVRNPSAAQGQFGNLIFGFAVTEALGIFSLLIALLLLFAL*" FT gene complement(266826..267053) FT /locus_tag="Nwi_0237" FT /colour=3 FT misc_feature complement(join(266838..266903,266949..267014)) FT /colour=11 FT /locus_tag="Nwi_0237" FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(267106..267849) FT /locus_tag="Nwi_0238" FT /product="H+-transporting two-sector ATPase, A subunit" FT /note="TIGRFAM: H+-transporting two-sector ATPase, A FT subunit: (6.1e-74)" FT /note="PFAM: H+-transporting two-sector ATPase, A subunit: FT (8.7e-56)" FT /note="SPTR top hit: 'Q6NBI2 Fo ATP synthase subunit A. FT Rhodopseudomonas palustris., evalue=1e-110, 79% identity FT hit'" FT /note="KEGG top hit: 'rpa:RPA0846 atpB EC=3.6.3.14 FT category=Metabolism; Energy Metabolism; Oxidative FT phosphorylation [PATH:rpa00190] Metabolism; Energy FT Metabolism; ATP synthesis [PATH:rpa00193] , evalue=1e-110, FT 79.591837% identity hit'" FT /note="COGs: 'evalue=1e-34 score=140 category=C FT group=COG0356 F0F1-type ATP synthase subunit a'" FT /note="InterPro IPR000568" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=3 FT /translation="MMDPIHQFNIEPIFTIGHIGGQEIAFTNSSAYMFLAVALTSLLMLGTGRRLVPGRMQSIAEISYEFVADTIRTTAGKEGM FT KFFPFVFSIFMLVTVSNLVGIIPYTFTISSHIIVTAALAFLVFFTVLIYGFYKNGLRFFKLFVPSGIPVVILPLVVTIEV FT ISFLSRPVSHSVRLFANMLAGHITLKVFASFVTMLGAMGIVGVFGAVLPLALVVALTALELLVAFLQAYVFTILTCIYIN FT DAIHPGH*" FT gene complement(267106..267849) FT /locus_tag="Nwi_0238" FT /colour=3 FT misc_feature complement(join(267121..267186,267208..267273,267358..267423,267460..267525,267538..267603,267712..267777)) FT /colour=11 FT /locus_tag="Nwi_0238" FT /note="6 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(267918..268301) FT /locus_tag="Nwi_0239" FT /product="FoF1 ATP synthase, subunit I" FT /note="SPTR top hit: 'Q6NBI1 FoF1 ATP synthase, subunit I. FT Rhodopseudomonas palustris., evalue=2e-33, 58% identity FT hit'" FT /note="KEGG top hit: 'rpa:RPA0847 atpI FT category=Unassigned, evalue=5e-34, 58.267717% identity FT hit'" FT /note="COGs: 'evalue=5e-17 score=80.0 category=S FT group=COG5336 Uncharacterized protein conserved in FT bacteria'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MSDGTDKNSGGHGDREHSAPDEAALSERLGNLDQRLSRLRGPGRSETDRSGDGSGDGAARASAMARGFRLSSELIAGVAV FT GALIGWGVDRLLSTSPWGLIVFFLLGFAAGVINVMRSAGVIPEQKDR*" FT gene complement(267918..268301) FT /locus_tag="Nwi_0239" FT /colour=13 FT misc_feature complement(join(267942..268007,268038..268091)) FT /colour=11 FT /locus_tag="Nwi_0239" FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 268849..269391 FT /locus_tag="Nwi_0240" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q89V65 Blr1191 protein. FT Bradyrhizobium japonicum., evalue=4e-35, 48% identity FT hit'" FT /note="KEGG top hit: 'bja:blr1191 category=Unassigned, FT evalue=2e-35, 48.850575% identity hit'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MDATPPLKLSRISAIAAIFCCLAAPALGQASEAGKARYTLMPMSGGFVRLDTLTGVVSHCEDKGSGWACYALPEEHAALD FT KEIGRLQAENEALKAQLAARESAGKTGKVVSGQEATGSGGSGSATPKADEPKSAEADRNSIEVPLPSDRDVGRLMSFVER FT AWRRLMELASRIEHDPSGRI*" FT sig_peptide 268849..268935 FT /colour=11 FT /locus_tag="Nwi_0240" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.999) with cleavage site probability FT 0.561 atresidue 29" FT gene 268849..269391 FT /locus_tag="Nwi_0240" FT /colour=13 FT CDS 269923..270573 FT /locus_tag="Nwi_0241" FT /product="Transcriptional regulatory protein, LuxR family" FT /note="PFAM: Transcriptional regulatory protein, LuxR: (2.7e-20) FT Response regulator receiver: (1e-36)" FT /note="SMART: Transcriptional regulatory protein, LuxR: (9e-25) FT Response regulator receiver: (1.3e-34)" FT /note="SPTR top hit: 'Q89XC8 Two-component response FT regulator. Bradyrhizobium japonicum., evalue=4e-52, 55% FT identity hit'" FT /note="KEGG top hit: 'bja:bll0386 category=Unassigned, FT evalue=2e-52, 55.102041% identity hit'" FT /note="COGs: 'evalue=3e-48 score=185 category=T FT group=COG4566 Response regulator'" FT /note="InterPro IPR000792:IPR001789" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=15 FT /translation="MGKLLSFVSDVSIFILDDDPSVRETLVLLLKIEGYAAQGFGDGSSFLEAVRNASPACVILDLNLPGESGFDVLRRLADER FT VAAPILVISGAADISMAVAAMKYGALDFLEKPFSSDVIIERVRAAVKVWREARGSERDGFANFPGRHLLTCREREVLSQV FT ARGASNKEAGRRLGISPRTVEVHRARIMDKLGAKNTADLIRIVFSEGSAWRGLSAS* FT " FT gene 269923..270573 FT /locus_tag="Nwi_0241" FT /colour=15 FT CDS complement(270746..271975) FT /locus_tag="Nwi_0242" FT /EC_number="2.3.1.37" FT /product="5-aminolevulinic acid synthase" FT /note="TIGRFAM: 5-aminolevulinic acid synthase: (0)" FT /note="PFAM: Aminotransferase, class I and II: (1.6e-91)" FT /note="SPTR top hit: 'P08262 5-aminolevulinate synthase FT (EC 2.3.1.37) (5-aminolevulinic acid synthase) FT (Delta-aminolevulinate synthase) (Delta-ALA synthetase). FT Bradyrhizobium japonicum., evalue=0.0, 85% identity hit'" FT /note="KEGG top hit: 'bja:bll1200 hemA EC=2.3.1.37 FT category=Metabolism; Amino Acid Metabolism; Glycine, FT serine and threonine metabolism [PATH:bja00260] , FT evalue=0.0, 85.085575% identity hit'" FT /note="COGs: 'evalue=1.0e-123 score=436 category=H FT group=COG0156 7-keto-8-aminopelargonate synthetase and FT related enzymes'" FT /note="InterPro IPR001917:IPR004839:IPR010961" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=12 FT /translation="MDYSKFFCNALDRLHDERRYRVFADLERIAGRFPYATLHTPQGPRNVIIWCSNDYLGMGQHPKVVGAMVETATRVGTGAG FT GTRNIAGTHHPLVQLEQELADLHGKPAALVFTSGYVSNQTGISTLAKLIPDCLILSDALNHNSMIEGIRQSGCERVVFRH FT NDLAHLEELLRAAPPDRPKLIACESLYSMDGDVAPLSKICDLAERYGAMTYVDEVHAVGMYGPRGGGIAEREGVMHRIDV FT LEGTLAKAFGCLGGYIAARSEIIDAVRSYAPGFIFTTSLPPAICSAATAAIRHLKSSTWERERHQERAARTKASLIAAGL FT PVMVSSTHIVPVFVGDPERCKRASDMLLHDHNIYIQPINYPTVAKGMERLRITPSPYHDDALVDQLAEALLQVWERLGLP FT LQAKSMAAE*" FT gene complement(270746..271975) FT /locus_tag="Nwi_0242" FT /colour=12 FT CDS complement(272227..273252) FT /locus_tag="Nwi_0243" FT /EC_number="2.8.1.6" FT /product="biotin synthase" FT /note="TIGRFAM: Biotin synthase: (1.4e-143)" FT /note="PFAM: Radical SAM: (1.3e-25) Biotin and thiamin FT synthesis associated: (4.7e-35)" FT /note="SMART: Elongator protein 3/MiaB/NifB: (5e-37)" FT /note="SPTR top hit: 'Q9AMS7 ID897 (Biotin synthetase). FT Bradyrhizobium japonicum., evalue=1e-136, 74% identity FT hit'" FT /note="KEGG top hit: 'bja:blr2095 bioB EC=2.8.1.6 FT category=Metabolism; Metabolism of Cofactors and Vitamins; FT Biotin metabolism [PATH:bja00780] , evalue=1e-136, FT 74.920635% identity hit'" FT /note="COGs: 'evalue=1.0e-111 score=396 category=H FT group=COG0502 Biotin synthase and related enzymes'" FT /note="InterPro IPR002684:IPR006638:IPR007197:IPR010722" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=12 FT /translation="MKSDPVSFDSSHDLMARPRHDWTRVEAETLYTTPFPDLLFQAQTIHRRHFDPNHVETASLLSIKTGGCPEDCGYCAQSAH FT YDAGVKATKLMDKDAVLETARRAKDAGAGRFCMAAAWRHPKDRDLDRVCDMISAVKALGMETCATLGMLTPEQARRLQEA FT GLDFYNHNVDTSPEFYDKIITTRTMQDRIETLACAREAGLKLCCGGIIGMGEQVGDRLGMLILLANLDEHPESVPINLWN FT EVRGVPVNDTADRPDPIALVRMIAVARIMMPKSVVRLSAGRQYMTDELQALCFVAGANSIFIGDVLLTTKNPATLRDAAL FT LDRLGMSSPLDGVKMPAASPS*" FT gene complement(272227..273252) FT /locus_tag="Nwi_0243" FT /colour=12 FT CDS complement(273509..274234) FT /locus_tag="Nwi_0244" FT /product="possible outer membrane protein" FT /note="SPTR top hit: 'Q6NBH1 Possible outer membrane FT protein precursor. Rhodopseudomonas palustris., FT evalue=7e-69, 57% identity hit'" FT /note="KEGG top hit: 'rpa:RPA0857 category=Unassigned, FT evalue=4e-69, 57.563025% identity hit'" FT /note="COGs: 'evalue=2e-13 score=69.6 category=M FT group=COG3637 Opacity protein and related surface FT antigens'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MTGPTNGCSELEFLENEMKKILLASVAFLGMAAIVPAQAADLAPRPYTKAPPYVPAPIYNWTGFYLGGHIGGAFGGPGNV FT LAPGFFNNNDGAFMGGGQVGYDTQFSPNWVFGIEANYSFLDTGSFFANRGLGSVTARLGYTWGPALLYVKGGYGWADSRF FT TNGFAGNGGRDGYTVGGGLEYLFTQNWSGKVEYQYYDLGNVNFFGPLGGIGNFRNDQHTVKVGLNYRFNFGAPAAPYAPG FT Y*" FT gene complement(273509..274234) FT /locus_tag="Nwi_0244" FT /colour=9 FT misc_feature complement(274115..274171) FT /colour=11 FT /locus_tag="Nwi_0244" FT /note="1 probable transmembrane helix predicted FT byTMHMM2.0" FT sig_peptide complement(274115..274234) FT /colour=11 FT /locus_tag="Nwi_0244" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.989) with cleavage site probability FT 0.989 atresidue 40" FT tRNA complement(274519..274593) FT /locus_tag="Nwi_R0005" FT /gene="tRNA-Thr3" FT /note="anticodon GGT, Cove Score=89.35" FT /product="tRNA_Thr" FT /colour=8 FT CDS 274793..275038 FT /locus_tag="Nwi_0245" FT /product="hypothetical protein" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=0 FT /translation="MSIKINSPAPADYKGRIRTFGQKMKIMTEKRDTDRDAENGGRRMRLRAALRENLKRRKSQSRGRGDQAASAPDPDPEHRDE*" FT gene 274793..275038 FT /locus_tag="Nwi_0245" FT /colour=0 FT CDS 275304..276593 FT /locus_tag="Nwi_0246" FT /EC_number="2.5.1.7" FT /product="UDP-N-acetylglucosamine FT 1-carboxyvinyltransferase" FT /note="TIGRFAM: UDP-N-acetylglucosamine FT 1-carboxyvinyltransferase: (2.2e-229)" FT /note="PFAM: EPSP synthase (3-phosphoshikimate FT 1-carboxyvinyltransferase): (7.2e-126)" FT /note="SPTR top hit: 'Q6N176 UDP-N-acetylglucosamine FT 1-carboxyvinyltransferase (EC 2.5.1.7). Rhodopseudomonas FT palustris., evalue=0.0, 86% identity hit'" FT /note="KEGG top hit: 'rpa:RPA4533 murA EC=2.5.1.7 FT category=Metabolism; Carbohydrate Metabolism; Aminosugars FT metabolism [PATH:rpa00530] , evalue=0.0, 86.416862% FT identity hit'" FT /note="COGs: 'evalue=1.0e-170 score=590 category=M FT group=COG0766 UDP-N-acetylglucosamine enolpyruvyl FT transferase'" FT /note="InterPro IPR001986:IPR005750" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MDRIRIVGGNRLNGTIPISGAKNAALPLMIAALLTEETLILDNVPRLADVAQLQRILGNHGVDIMSAGKRPGDHEYQGQT FT LHISAASVIDTTAPYELVSKMRASFWVIAPLLARMHEARVSLPGGCAIGTRPVDLLILALEKLGARIAIDGGYVIASAPA FT GLRGAEVAFPKVTVSGTHVALMAATLASGTTVITNAACEPEIVDVADCLNKMGARVSGAGTPRIVIEGVGRLGGARHTVL FT PDRIETGTYAMAVAMTGGEVLLRGARPELLQAALDVLTEAGAEITPNNEGIRVARNGAGINPVTVSTAPFPGFPTDLQAQ FT LMALMTRARGTSHITETIFENRFMHVQELARLGARIHLDGETATIEGIETLRGAPVMATDLRASVSLVIAGLAGEGETMV FT NRVYHLDRGFEQLEKKLSACGASIERIRA*" FT gene 275304..276593 FT /locus_tag="Nwi_0246" FT /colour=9 FT CDS 276758..278092 FT /locus_tag="Nwi_0247" FT /EC_number="1.1.1.23" FT /product="Histidinol dehydrogenase" FT /note="TIGRFAM: Histidinol dehydrogenase: (2.7e-163)" FT /note="PFAM: Histidinol dehydrogenase: (1.8e-189)" FT /note="SPTR top hit: 'P59397 Histidinol dehydrogenase (EC FT 1.1.1.23) (HDH). Bradyrhizobium japonicum., evalue=0.0, FT 83% identity hit'" FT /note="KEGG top hit: 'bja:blr1256 hisD EC=1.1.1.23 FT category=Metabolism; Amino Acid Metabolism; Histidine FT metabolism [PATH:bja00340] , evalue=0.0, 83.216783% FT identity hit'" FT /note="COGs: 'evalue=1.0e-150 score=523 category=E FT group=COG0141 Histidinol dehydrogenase'" FT /note="InterPro IPR001692" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=10 FT /translation="VTRDIVPHPPEASQPMPIRIDSRNADFVPRFKAFLATKREVSADIEAATRAIVDDVAARGDAALIEATCKFDRLSVDAAG FT LRFTAAEIDAAVAACDAATLDALKLARDRIETFHRRQLPKDDRFIDALGVELGSRWTAIEAVGLYVPGGSAAYPSSVLMN FT AVPAMVAGVARVVMVVPSPAGRINPLVLAAARLGGVSEIYRVGGAQAVAALAYGTATIAPVAKIVGPGNAYVAAAKRQVF FT GKVGIDMIAGPSEVLVIADQTGNAGWIAADLLAQAEHDANAQSILITDSEALAADVERAVETQLATLPRAGIARASWNDF FT GAVILVTDLDEAVVLADSIAAEHLEIMTADPEGLAARIRNAGAIFLGPHTPEAIGDYVGGSNHVLPTARSARFSSGLGVL FT DFMKRTSILKCGPDQLRALGPAAMTLGKAEGLDAHARSVGVRLN*" FT gene 276758..278092 FT /locus_tag="Nwi_0247" FT /colour=10 FT CDS 278394..278897 FT /locus_tag="Nwi_0248" FT /product="conserved hypothetical protein" FT /note="PFAM: Uncharacterised conserved protein UCP032146: FT (3.7e-120)" FT /note="SPTR top hit: 'Q6N178 Hypothetical protein. FT Rhodopseudomonas palustris., evalue=5e-81, 92% identity FT hit'" FT /note="KEGG top hit: 'rpa:RPA4530 category=Unassigned, FT evalue=3e-81, 92.500000% identity hit'" FT /note="COGs: 'evalue=1e-63 score=235 category=S FT group=COG5328 Uncharacterized protein conserved in FT bacteria'" FT /note="InterPro IPR008321" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MSKETPSEDDSRHRIVAVTLDEDSIGRSGPDIEHERAIAIYDLVEKNLFAPEGAEGGPFTLHIAITGNRLMFDIRREDGA FT PVVTHLLSLTPFRRIVKDYFMICDSYYQAIRTATPDKIEAIDMGRRGIHDEGSRTLQERLNGKVHVDFETARRLFTLISV FT LHWKGNA*" FT gene 278394..278897 FT /locus_tag="Nwi_0248" FT /colour=13 FT CDS 278940..279452 FT /locus_tag="Nwi_0249" FT /product="low molecular weight phosphotyrosine protein FT phosphatase" FT /note="PFAM: Low molecular weight phosphotyrosine protein FT phosphatase: (2.8e-17)" FT /note="SMART: Low molecular weight phosphotyrosine protein FT phosphatase: (8.2e-20)" FT /note="SPTR top hit: 'Q89V01 Blr1258 protein. FT Bradyrhizobium japonicum., evalue=2e-65, 80% identity FT hit'" FT /note="KEGG top hit: 'bja:blr1258 category=Unassigned, FT evalue=9e-66, 80.794702% identity hit'" FT /note="COGs: 'evalue=3e-26 score=111 category=T FT group=COG0394 Protein-tyrosine-phosphatase'" FT /note="InterPro IPR000106" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=15 FT /translation="MAARRARAKRKRLEPMAAPARVHSPQSVLFACAHNSVRSPMAASLLQQMFPRTLYVRSAGVRTGELDPFAVAVMAELGQD FT ISKHRPMTFEEIEDWEGLNFDLIITLSPEAHHKALELTRTIAADVEYWPTPDPTIIEGNREQRLQAYRDVCDGLLSRIRK FT RFARGGGFKA*" FT gene 278940..279452 FT /locus_tag="Nwi_0249" FT /colour=15 FT CDS complement(279789..279962) FT /pseudo FT /locus_tag="Nwi_0250" FT /translation="CESAVGLTNLGVVFCPVHDGGGATPLGYVACWKPDNASPALKTFLSGIRAADPSLVV" FT gene complement(279789..279962) FT /pseudo FT /note="Similarity to transcriptional regulator gi|21232675 FT Xanthomonas campestris pv campestris str ATCC 33913" FT /locus_tag="Nwi_0250" FT CDS 280460..282085 FT /locus_tag="Nwi_0251" FT /product="Helicase" FT /note="PFAM: SNF2-related: (2.6e-10) Helicase, C-terminal: FT (1.4e-19)" FT /note="SMART: Helicase, C-terminal: (2.6e-17) DEAD/DEAH FT box helicase, N-terminal: (3.1e-16)" FT /note="SPTR top hit: 'Q65HF7 YqhH. Bacillus licheniformis FT (strain DSM 13 / ATCC 14580)., evalue=4e-54, 32% identity FT hit'" FT /note="KEGG top hit: 'bld:BLi02633 yqhH FT category=Unassigned, evalue=2e-54, 32.627119% identity FT hit'" FT /note="COGs: 'evalue=3e-31 score=130 category=L FT group=COG0553 Superfamily II DNA/RNA helicases SNF2 FT family'" FT /note="InterPro IPR000330:IPR001410:IPR001650:IPR011545" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=2 FT /translation="LPVTLLADDVGLGKTISAGLVASELIARNRVAKILIVAPKLLGPQWKDELEAKFDIPGEVVTGSKLASAEPDEVGAVITT FT YHSARAHLDKIPDDRFDMLVLDEAHKLRNLYGVDPTPQVAKVFHRTLQQRRFRYVLMLTATPIQNRLWDLYSLVDLLTVA FT RGHENPFGSEGMFARRFIADKRETARILKPDAREDFRKIVYGYMSRVRRGDANLDFPERKIQLHKVAPSSEELALIKAIA FT KPIQKLNRLAQISILQALTSSPHALMVQLQTMARNGTVPMELAATVQAIVTPMRTSAKLEGLRQLVSMLQQQNPTSWRMV FT VFTGRRETQTTIQAFLEELGLKVGIINGSSGQRNQDTIARFRGNPPEIRAIVSTEAGSEGVNLQIANVLINFDLPWNPMI FT VEQRIGRVQRLGSQHKNVVIYNVMLAGTFEEYIVGRLMTKLQMATDAIGDIESLLEASGVGDGEEGTGFDEKIRELVVAA FT SMLPRRPLKKKTRISTPPLELWMATNMSAHKRRRSKRPNPPWNSNHSSARPLSTLAARLQT* FT " FT gene 280460..282085 FT /locus_tag="Nwi_0251" FT /colour=2 FT CDS complement(282177..282827) FT /locus_tag="Nwi_0252" FT /product="Transcriptional regulatory protein, LysR family" FT /note="PFAM: Transcriptional regulatory protein, LysR: FT (3.8e-16)" FT /note="SPTR top hit: 'Q89B92 Transcriptional regulatory FT protein. Bradyrhizobium japonicum., evalue=2e-31, 35% FT identity hit'" FT /note="KEGG top hit: 'bja:blr8273 category=Unassigned, FT evalue=1e-31, 35.643564% identity hit'" FT /note="COGs: 'evalue=5e-25 score=108 category=K FT group=COG0583 Transcriptional regulator'" FT /note="InterPro IPR000847" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=6 FT /translation="MDLRHLRYIVAAARNGSFSAAANEFNARQPIVSKRIKEVEDELGVRLFERSTAGARLTLLGEDFVVDARRVLDETEHMAR FT HAKASRAGTLGHVVVGFYKSLSAGAFRAAVSCFRKQNPDIDIELVELPFADIAAGVISGALDAAIVLGDAGKCAMFKTIG FT LWSEHLVIALPKDHPLADKPIVYWPDLRGERFLVTVRDPGPDTRSTRRRNAGLPGR* FT " FT gene complement(282177..282827) FT /locus_tag="Nwi_0252" FT /colour=6 FT CDS complement(282940..283542) FT /locus_tag="Nwi_0253" FT /product="possible ferric siderophore receptor protein" FT /note="SPTR top hit: 'Q6N673 Possible ferric siderophore FT receptor protein precursor. Rhodopseudomonas palustris., FT evalue=3e-42, 47% identity hit'" FT /note="KEGG top hit: 'rpa:RPA2745 category=Unassigned, FT evalue=2e-42, 47.263682% identity hit'" FT /note="COGs: 'evalue=1e-12 score=66 category=P FT group=COG1629 Outer membrane receptor proteins mostly Fe FT transport'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="LHPYLTKQTEVGVKYDFGTFIATAAVFEFEKQNTIVVPDGSSGPGRLAIDGKQRHRGVEISFFGEPYEGVRLLGGVTYSD FT ARMIATQGGTLDGTFVTGVSRWQGNLGAEWDTPFLDGLTFTGRMIATGSQYASTNNTLRMPGWTRFDVGARYTTTALGNP FT LTIRGGIENVLGTKYWSQVSGSIFSLGAPRIFKLSATIDF*" FT gene complement(282940..283542) FT /locus_tag="Nwi_0253" FT /colour=9 FT CDS complement(283688..286045) FT /locus_tag="Nwi_0254" FT /EC_number="2.7.7.49" FT /product="helix-turn-helix, Fis-type" FT /note="TIGRFAM: Helix-turn-helix, Fis-type: (0.00077) FT ParB-like partition protein: (8.4e-18)" FT /note="PFAM: Integrase, catalytic region: (1.1e-40) FT ParB-like nuclease: (7.8e-18)" FT /note="SMART: ParB-like nuclease: (4.6e-21)" FT /note="SPTR top hit: 'Q99QH1 ISCc3, transposase OrfB. FT Caulobacter crescentus., evalue=1e-137, 71% identity hit'" FT /note="KEGG top hit: 'ccr:CC2729 category=Unassigned, FT evalue=1e-137, 71.472393% identity hit'" FT /note="COGs: 'evalue=5e-14 score=73 category=K FT group=COG1475 transcriptional regulators'" FT /note="InterPro IPR001584:IPR002197:IPR003115:IPR004437" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=6 FT /translation="MSIQTIPLQSILPPQGNPRSAFDPATIEGLAASIRQDGLLQNLVVRPSRGRQFRIVSGERRYRALKLLQERGDIAEDFGV FT TVEIRSKLSKDDALRLATVENVQRENLPPLDEAAAFAALIRKGASLDDLAAKTGLSHTTIRRRLALNDLCREAKEALAAG FT TITLAQAEALTLGDADAQRSVLGDLESGYVPYSAADIRDHLLDERPSVAMAIFPVEQYTGTITTDLFADDEESYFDDADQ FT FLELQRQAVEKLATEYAGKAAWVEVTEAHRIPAWQYEEAEDGEQGGVLINLAPSGRVEIREGLVSPACPPSGLLRQFRSF FT REGRISGSSQPIWSADETEIRTRQSAGRTGAEGHPTADAPALFGGGEDPYRAGRTARRGEHLRALPPRRHRRLDVLRLVQ FT GVPGSRQAPVGGRHGTCRNLWRGERSSSGSLGVEGSRRRSHPGEPSAKKKHERGWGERGMRYPASEKAEIIALVEQSHLP FT AKRTLDKLGIPRATFYRWYDRYRAGGIEALADHRSRPDRVWNRIPDDVRGQIIDLALELPELSPRELAVRFTDERKYFVS FT EASVYRLLKAHDLITSPAYVVIKAANEFKDKTTAANQLWQTDFTYLKITGWGWYYLSTVLDDFSRYIVAWRLGPTMCASD FT VTATLDQALAASGLDHVSVRQRPRLLSDNGSSYVADDLATWLRAKDMQHVRGAPYHPQTQGKIERWHQTLKNRILLENYY FT LPDDLKRQVAAFVEHYNHDRYHESIGNVTPADVYFGRAETILAERHRIKRDTIANRRLQHQLQAA* FT " FT gene complement(283688..286045) FT /locus_tag="Nwi_0254" FT /colour=6 FT CDS complement(286133..287032) FT /locus_tag="Nwi_0255" FT /product="antirestriction protein" FT /note="SPTR top hit: 'Q6LB58 Putative ardC protein. FT Oligotropha carboxidovorans (Pseudomonas FT carboxydovorans)., evalue=1e-97, 57% identity hit'" FT /note="KEGG top hit: 'atc:AGR_pAT_151 FT category=Unassigned, evalue=2e-94, 57.388316% identity FT hit'" FT /note="COGs: 'evalue=5e-99 score=354 category=L FT group=COG4227 Antirestriction protein'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=2 FT /translation="MKSDVYTRITDQIVAELEKGVRPWHKPWNAGHVAGPISRPLRSCGKPYSGINIVMLWATAMERGYSAPIWMTFRQALELG FT AHVRKGEKGALVVFASKITRTEQDDSGQAHEREIPFLKGYTVFNVEQIDDLPAHYTASTAPRLNAEQRIARAEGFFAATR FT ADIRHGGNSAHYVPSLDYIQMPPFESFRDAAAYYATLAHECTHWTRHEKRLDRDLGRKRFGDQGYAMEELVAELGAAFLC FT ADLDLVPQIRDDHAPYIAGWLKVLKDDKRAIFTAASHAQRAADFLTGLQPVVAQTAEAA* FT " FT gene complement(286133..287032) FT /locus_tag="Nwi_0255" FT /colour=2 FT CDS 287301..287795 FT /locus_tag="Nwi_0256" FT /product="hypothetical protein" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=0 FT /translation="MAVTRRLVRRSFSEGGRRGAVHESPVLRRLGGAGRVKVPHLILLLPFPMYEGAETMKEERNRKSRHEPRGKFVTGEDYKK FT TWGTPLGQDCIDLHETLARWLGERLVFLADHTTTVTPDAAEPWHEALRRNGEALLRYAAEWPEGEGEAKRSLEWVARNLE FT SLWD*" FT gene 287301..287795 FT /locus_tag="Nwi_0256" FT /colour=0 FT CDS 287999..289213 FT /locus_tag="Nwi_0257" FT /product="hypothetical protein" FT /note="SPTR top hit: 'Q9Z5U3 Hypothetical protein. FT Zymomonas mobilis., evalue=3e-15, 35% identity hit'" FT /note="KEGG top hit: 'zmo:ZMO1373 category=Unassigned, FT evalue=1e-15, 35.772358% identity hit'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=0 FT /translation="MIYFEINGKRIKPGDFGDALMQAVLKSLEAQIREKIGSIRDPETGEFPVVVMRGDSLENLKMHVEGSPELIALVRERMGD FT GEEEETPDENAMPEGAPRVFLSYTSDDAALAERIATALQANGIDTWWDKWCITTGDSLRQKIDEGLGDCTHFLVLLTPQS FT VGKPWVNQEMDAGLVRKLGNKCRFLPVRHKLPPKDLPPLLSGMHAPEISADEDITQLINDIHGISRKPRLGPAPHAVAAE FT AVTQTGCSAAANTIARYFVENTTYGRFADPIIDVEPLAEKTGLTIADTKDALYELSAFFKDTKIHALVKASLFTEFDRHW FT KPWDPREDALKLAADIMNDPKFPAESKAIAERYGWEPRRLNPAANYLFERGLLVDYKVIGDREFELHRIVGKADQLRRFL FT KGRQ*" FT gene 287999..289213 FT /locus_tag="Nwi_0257" FT /colour=0 FT CDS complement(289260..290468) FT /locus_tag="Nwi_0258" FT /product="hypothetical protein" FT /note="SPTR top hit: 'Q73LN7 Hypothetical protein. FT Treponema denticola., evalue=2e-11, 23% identity hit'" FT /note="KEGG top hit: 'tde:TDE1825 category=Unassigned, FT evalue=1e-11, 23.618090% identity hit'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=0 FT /translation="MDNPLLCIFCDNALGPDTKPEHILPNALGGRKTTRRVICSDCNNRFGSTIDDALAKQVEIIRNLLQLESGTGKPPPMLRN FT VQAGTEKVTFRNDGQPELVTPPFTVTERPDGTAEVAITVKTPEELRRFLPHIAARLRMSEDELVKQMEGGTGVVVERRPG FT EVHHHISFGKEDAIRSVAKSCLVLLATLVGNDAVKSDAFKEARTFVLTGSKEFNEKRVTIDSRPVPGVDDLIRVYGMFFN FT LIYVRSDSAGRVIGHFTLYNAISWQIVLAEAGGPAECKSGLVSNPLDPTSWSDAIADTVNIPFAWLDAADKGYELERARQ FT RLISMAQYHHDESQQAEIARIVNDVCAKYGIKSDNDPIDPAHQEAIFNEITARLAAHAMHQPYEQRLTADQMKKLLKGES FT SE*" FT gene complement(289260..290468) FT /locus_tag="Nwi_0258" FT /colour=0 FT CDS complement(290585..291466) FT /locus_tag="Nwi_0259" FT /product="hypothetical protein" FT /note="SPTR top hit: 'Q82GA3 Hypothetical protein. FT Streptomyces avermitilis., evalue=8e-12, 35% identity FT hit'" FT /note="KEGG top hit: 'sma:SAV3995 category=Unassigned, FT evalue=4e-12, 35.454545% identity hit'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=0 FT /translation="MDLPKVGNTYAQERAGIAAVQGYAADRKQIWRETGTGDVGIDGQLEFVNEQALATGRTVAVQVKAGPSYFQHETAAGWKF FT YPEAKHRNYWEAFPLPVLLVLHNTETSLSYWTDARQALRTPTREERAYIEIPGTNVLQKSDPMTLFENAGVQDQPFIPDL FT HDVLKRLLATESREGTFPLSHFDLFVHGLTNICRSIYYGMDAVCNAVEYNLSVRKSEFGMGMGEPEHNFVFGFVKLLVAQ FT NLAQIDYADCLIDWIDRQMQPHFVAPLTSRGRALVALIHEEERAIGRCRCSAR*" FT gene complement(290585..291466) FT /locus_tag="Nwi_0259" FT /colour=0 FT CDS complement(291472..292905) FT /locus_tag="Nwi_0260" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q8KK95 Hypothetical protein orf38. FT Proteus vulgaris., evalue=1e-105, 48% identity hit'" FT /note="KEGG top hit: 'ppu:PP0049 category=Unassigned, FT evalue=3e-93, 46.118721% identity hit'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MTQKETSPRENEQSAGLLLPLSERCFDLYALSLPRGPNFHPWSFRSAWSSGKDSSIGAVLQLSPAGPFATLILRRQVDHR FT FVLTHRKEMIGSEQEAFADLAANMQFSAPEPLRPGEKRRPLLLDTAGRTPGDYFKLLTGTRTHYPALMAIGELYLAMPRP FT DDNFAGDFQTNNFNSRLWELYLFAAFREQDITVTQPLPSPDFLLERDGHSCWVEAVTANAEEPYAQGFTTPAPPPDDRAE FT RLIGAPAERFAKTLRSKLQREYDKAPHVTGQSFAFAIADFHAPGSMVWSREALPSYLYGIHAQVGEGPEGPFAFAESVAK FT LRGSHSIPAGLFRDPAMAHLSAVIFSNAATLGKFNRMGLLAGWRPQGLSMVREGLIFDRTPGALEPKTFRLDVLSEEYAR FT LWPGGEAWCQELEVFHNPMATHPIDFDLIPGATHWFEENGELMCSAYWECSVLSSMTHLKIETPKDGITQEKSKQAG* FT " FT gene complement(291472..292905) FT /locus_tag="Nwi_0260" FT /colour=13 FT CDS complement(292902..293717) FT /locus_tag="Nwi_0261" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q5X0F2 Hypothetical protein. FT Legionella pneumophila (strain Lens)., evalue=3e-58, 47% FT identity hit'" FT /note="KEGG top hit: 'lpf:lpl0068 category=Unassigned, FT evalue=2e-58, 47.520661% identity hit'" FT /note="COGs: 'evalue=2e-12 score=66 category=S FT group=COG2253 Uncharacterized conserved protein'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="VIPRDYITEWRAQAPWVQDIQVEQDLVICRALVEIFSHPVLSQALAFRGGTALYKLYLKPAARYSEDIDLVQMRAEPAGP FT VMTALREVLDPWLGAPRWKQTEGRVTFVYRFMSEDNPPIGMRLKVEINSREHFAVHGFTRIPFSVASRWFEGACEIPTYE FT LDELLATKLRALYQRRKGRDLFDLETALKVDGVDAGRIVEAFGAYMDHGGHQVTRAQFERNMAQKMGDPQFTADIGPLLA FT GDHEWDIEAAAAAVGGNLIARLPGPPSDDRS*" FT gene complement(292902..293717) FT /locus_tag="Nwi_0261" FT /colour=13 FT CDS complement(293714..294514) FT /locus_tag="Nwi_0262" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q5X0F3 Hypothetical protein. FT Legionella pneumophila (strain Lens)., evalue=2e-52, 44% FT identity hit'" FT /note="KEGG top hit: 'lpf:lpl0067 category=Unassigned, FT evalue=1e-52, 44.230769% identity hit'" FT /note="COGs: 'evalue=1e-11 score=63.5 category=K FT group=COG5340 transcriptional regulator'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MKSEKSLHARDYITALAASGRYLFSSKEAQAALGVSADAAKLALNRLGKRGLIAAPARGFYVIVPPEYQSLRCLPAEQFI FT PDLMKRLGAAYYTGLLSAAQFHGAAHHRPQEFQVMVAKARRTIVCGAVRVAFFVRKNLSAIPVQSFNTPRGTILVSSPEA FT TAFDLVGYQGQIGGLDQVATVLGELAEKLNPEKLADVAQSAPVPWAQRLGYLLGKVDAADRTEALRSFVSTHARQTAPLL FT PAAPLDGAARDDVWKLAINADVEAEL*" FT gene complement(293714..294514) FT /locus_tag="Nwi_0262" FT /colour=13 FT CDS 294625..295182 FT /locus_tag="Nwi_0263" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q5P5F6 Hypothetical protein. FT Azoarcus sp. (strain EbN1)., evalue=4e-17, 32% identity FT hit'" FT /note="KEGG top hit: 'eba:ebA2389 category=Unassigned, FT evalue=2e-17, 32.291667% identity hit'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MSDGPHRSLPLRPHWKVLAQRAAKAAHSPAEVCEALPYALKRDILEGPLKAVRDIMGGDSLFPSMRIEQLEALRASCPGS FT AAATQLIDCAIVAVQNGKVGDPGAQAAVQMALEGTMHSALRSIDEHYQREAGSRSSGYVRERLDAARETVDCGALARELL FT TPGKPPKRRSVNLRRHTGLDEGPAL*" FT gene 294625..295182 FT /locus_tag="Nwi_0263" FT /colour=13 FT CDS 295179..296537 FT /locus_tag="Nwi_0264" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q5P5F5 Hypothetical protein. FT Azoarcus sp. (strain EbN1)., evalue=1e-114, 47% identity FT hit'" FT /note="KEGG top hit: 'eba:ebA2390 category=Unassigned, FT evalue=1e-114, 47.982063% identity hit'" FT /note="COGs: 'evalue=6e-07 score=49.1 category=R FT group=COG0603 PP-loop superfamily ATPase'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MTATAFQPRIPDKAIDVVEPGRRARKGHLVCQLGRDLSFSTAALEHYAFARWEPVIYDAMLVAAAVEYADRSIRRPSLGW FT TRKIALRVPVHDPGRWSDPGVFTALHEALRFLTGDIWDLEFIKRRSAAPKPQQEFLQLPVKTEAVIAYSDGMDSRAVAGL FT MAESLGERLVRVRVGPKAGGRPFKGQREPFAAVPYSVAATGETSGRSRGFKFALISGIAAYLAEADVILVPESGQGAFGP FT ALVTVAHAYPDYRNHPLFTSRMERFLNALFRRPVRFVFPRLWHTKAETLREYAALPGSKWDDTKSCWRNARWSALNGNLV FT QCGICAACMLRRMSIHTAGLVDGPDAYVCNDLTAATIEEAVHPGFKKVNSAFREYAIAGTLHLDHLADMAQPNNHAALKR FT HAALTSTALGMTAAEAEGRLIGLLERHAAEWNKFTDDLGARSFIKKWTRASQ*" FT gene 295179..296537 FT /locus_tag="Nwi_0264" FT /colour=13 FT CDS 296516..297718 FT /locus_tag="Nwi_0265" FT /product="transcriptional regulator, XRE family" FT /note="PFAM: Helix-turn-helix motif: (3.1e-10) Protein of FT unknown function DUF955: (4.8e-10)" FT /note="SMART: Helix-turn-helix motif: (1.1e-13)" FT /note="SPTR top hit: 'Q5P5F4 Putative transcriptional FT regulator. Azoarcus sp. (strain EbN1)., evalue=1e-127, 59% FT identity hit'" FT /note="KEGG top hit: 'eba:ebA2392 category=Unassigned, FT evalue=1e-127, 59.173127% identity hit'" FT /note="COGs: 'evalue=2e-10 score=60 category=E FT group=COG2856 Zn peptidase'" FT /note="InterPro IPR001387:IPR006025:IPR010359" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MDAGKSMNGNSERLGDAEIGERLRIAREAAKLTQAEAAAAIGAARTTIVAIEQGKRRIQIDELQKLATSYRTSANAILRK FT EAVHLDMVPRFRKLSESSDHAVEQASRLLNDLVRAEVELENALGVARTRNYPPERPILPGDIRIQAEQDAQELRDWVGLG FT PGPVTDIVSILDLQLGIRVYVRRLDGKVAGLFAYDDAAGACILLNANHPHERLTQSGVHELAHFISTRRQPEVLTDDEPF FT VSREERYANIFQRCFLTPSRAVRQRFAEITAGQSHLTRRHIIFLAHAFGVSREAMVRRLEELKLAKDGTWDWFQSHGGIT FT DEQAREVLGELPARPSSSVLARGLVPPRLALLAREAWKKQFYSEGQLARLLQLDRHEVREVLDGADIEESEADELFKLSH FT *" FT gene 296516..297718 FT /locus_tag="Nwi_0265" FT /colour=11 FT CDS 297693..298310 FT /locus_tag="Nwi_0266" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q5P5F3 Hypothetical protein. FT Azoarcus sp. (strain EbN1)., evalue=4e-28, 37% identity FT hit'" FT /note="KEGG top hit: 'eba:ebA2393 category=Unassigned, FT evalue=2e-28, 37.313433% identity hit'" FT /note="COGs: 'evalue=0.005 score=34.5 category=R FT group=COG2405 nucleic acid-binding protein contains PIN FT domain'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MSSSSFPIDAQTVLVADASVAINLNATGCALEIIRAQPGAVVITENALAELAEGRRNGHRDYDQIQALIAANAMQVFRLD FT ESGNKVYASLVDGTAIRTLDDGEAATIGFACQTGAIALIDERKAQSICAADFPALRVVSTVDFLTHSLVADALGESALAQ FT AIVNALRNARMRVPPHQMEMIVKLIGEEAALNCTSLPKAHRAAAV*" FT gene 297693..298310 FT /locus_tag="Nwi_0266" FT /colour=13 FT CDS complement(298560..301178) FT /locus_tag="Nwi_0267" FT /product="hypothetical protein" FT /note="SPTR top hit: 'Q6D8L2 Putative restriction enzyme. FT Erwinia carotovora (subsp. atroseptica) (Pectobacterium FT atrosepticum)., evalue=7e-78, 27% identity hit'" FT /note="KEGG top hit: 'eca:ECA0960 category=Unassigned, FT evalue=4e-78, 27.283105% identity hit'" FT /note="COGs: 'evalue=7e-09 score=56.6 category=S FT group=COG4694 Uncharacterized protein conserved in FT bacteria'" FT /note="InterPro IPR001128:IPR003439" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=0 FT /translation="MSAAPSQSAPLTEKAALADLVTWAEKRPAWQKDALRRLVTGETLDDQAIAELTELCLDPKRAHAPISQSHIGAVTSSAEP FT ISLVSIKNPTAINALASQQELSFEQSGLTVIYGDNASGKSGYVRVLKHACRSRDAKFAIHRDLEDKTDTPQSAEIFFARG FT STTEQFSWTPDGEPHSDLPSVSIFDSRSASIHVESTNDVAYIPRPMRLLETLADACDRIKAALDSKIATLNKQVPLAIAA FT PSLSRETAAGSYVFGLNAKSNIPQLDKLAVLSEAENARLTTLETDFAQDPKRAVARLDNQRGEIERIQTTLQTLIGATNA FT AAFSEIGTLRKAHSEAVEAASIASQKLFSASPLPEVGQAAWQKLWEAARTYADTVAYPGKTFPSSDPDTLCVLCQQPLGA FT DAIARQETFESFVKSSTKSDEAAARAKLDTALVQLEARTLRLDGVLKHSKFLATEIGDASLARQVRRAFIVVLWRLRAML FT RAYGAPKPLGTDPLPALSNLAADLKTRAAQLSADTQSDDYKKLKSEYLELKDRAALAPLLPDIKAQIARLQESETINTAL FT KATAKKPITDKNKELSDRMVTDALRGRFAREIDKLKLSRMPVELRKEKDRQAVSYFRVALVERPDAKVGEIFSEGEHRCV FT ALAAFLAELVTAQRYSGIVFDDPMSSLDHIHRGAVASRLVEEAEHRQVVVFTHDLVFLYELRREAEKANRPIAFRNVRRQ FT QNRPGYVENELPDKAKSGLEMCNALRSSIKAAKSGFDHLNDTQRTIFCKGAIGQMRDAWEQAICDYIRPVLERFDNKVKP FT TSMFKLGILTEDDVKCVMAAQARLSEDLHSSAQALNPEAISLNDLLSEVKALEDWIQSIRERQNNATRPTIN* FT " FT gene complement(298560..301178) FT /locus_tag="Nwi_0267" FT /colour=0 FT CDS complement(301186..302520) FT /locus_tag="Nwi_0268" FT /product="restriction endonuclease S subunits" FT /note="SPTR top hit: 'Q7MPU5 Type I FT restriction-modification enzyme, specificity subunit. FT Vibrio vulnificus (strain YJ016)., evalue=2e-37, 28% FT identity hit'" FT /note="KEGG top hit: 'vvy:VV0267 category=Unassigned, FT evalue=1e-37, 28.767123% identity hit'" FT /note="COGs: 'evalue=3e-16 score=80 category=V FT group=COG0732 Restriction endonuclease S subunits'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MSAAWPTVALGDLLRRSEHIIPLDPEATYKEVTVRINGKGVVERRQVQGVEIAANRRYQAKSGQFIISRIDARHGASGLI FT PDELDGAVVTNDFPLFDVAEDRLDAAFLGWMSKTASFVELCKRASEGTTNRVRLSEDRFKALSIPLPPLDEQRRIVARIE FT ELAAKVKEARGLRAAAIEEVEAHWPAILRLAFDGKLVSLVPFKASAQEILKQAATFHANYQETKNNNAYPNKPQISDNGP FT YALPTGWCWTTLGSVLTHMVDCVNDTPNFSEVDTGLLGLKTTNIRPYRLDLQRRWYMTPGDFASWNRRQPPQAGDIVLTR FT EAPVGNVCMLPEGISACLTQRLMLLRAENRVIQSRYLLHFLNSPCFTDQIAASGRGQTHPHIRVGDAPHFLLPLPPMEQQ FT VKIVAELDALQSKLDSVKALQTETAAELDAMLPAILDKAFTGEL*" FT gene complement(301186..302520) FT /locus_tag="Nwi_0268" FT /colour=9 FT CDS complement(302517..304076) FT /locus_tag="Nwi_0269" FT /EC_number="2.1.1.72" FT /product="N-6 DNA methylase" FT /note="PFAM: N-6 DNA methylase: (3.9e-61)" FT /note="SPTR top hit: 'Q7MPU6 Type I FT restriction-modification system methyltransferase subunit. FT Vibrio vulnificus (strain YJ016)., evalue=0.0, 66% FT identity hit'" FT /note="KEGG top hit: 'vvy:VV0266 EC=2.1.1.72 FT category=Unassigned, evalue=0.0, 66.858238% identity hit'" FT /note="COGs: 'evalue=1e-53 score=204 category=V FT group=COG0286 Type I restriction-modification system FT methyltransferase subunit'" FT /note="InterPro IPR002052:IPR002296:IPR003356" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MARTKKKNGADAAPMTTSQMLGSLLKSARDIMRKDKGLNGDLDRLPLLTWIMFLKFLDDLEQQREEETALSGKKFKAAIE FT APYRWRDWAADPQGITGDELLSFINAEEAVRADGKKGPGLFAYLRALSSSNGDNRRDVIATVFKGVDNRMKSGYLLRDII FT NKVGGIHFTSSDELHTLGALYESMLREMRDAAGDSGEFYTPRAVVRFMVEVTDPRLGETVLDPASGTGGFLVETYNHLEK FT QVKTVADRKRLQDETITGCEPKSLPYLLCQMNLLLHGLDAPQIDPGNALRFKLSEIGEKERVDVILTNPPFGGEEEKGIQ FT GNFPEDRQTAETALLFLQLIMRKLKRQPTSVGRPARAAVVVPNGTLFGDGVCARIKEELLKDFNLHTIVRLPNGVFAPYT FT SIPTNILFFDRSCQTKEVWYYEQPLPDGRKNYTKTQPMQFEEFKGCMAWWTKREENDQAWRVSAKELRDANCNLDRKNPR FT SKVDFEHLPPDQLAEDILKKELRIAELMRKIKTTLGASA*" FT gene complement(302517..304076) FT /locus_tag="Nwi_0269" FT /colour=9 FT CDS complement(304063..306435) FT /locus_tag="Nwi_0270" FT /product="DEAD/DEAH box helicase" FT /note="PFAM: Helicase, C-terminal: (0.0045) Type III FT restriction enzyme, res subunit: (8.4e-53) Protein of FT unknown function DUF450: (9.9e-13) DEAD/DEAH box helicase, FT N-terminal: (3.6e-09)" FT /note="SMART: DEAD/DEAH box helicase, N-terminal: FT (6.8e-19)" FT /note="SPTR top hit: 'Q7MPU7 Type I site-specific FT restriction-modification system, R (Restriction) subunit. FT Vibrio vulnificus (strain YJ016)., evalue=0.0, 64% FT identity hit'" FT /note="KEGG top hit: 'vvy:VV0265 EC=3.1.21.3 FT category=Unassigned, evalue=0.0, 64.520202% identity hit'" FT /note="COGs: 'evalue=1.0e-121 score=429 category=V FT group=COG4096 Type I site-specific FT restriction-modification system R (restriction) subunit FT and related helicases'" FT /note="InterPro IPR001650:IPR006935:IPR007409:IPR011545" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MTNEADTCRKFVVPKLQSCGWDNEPHSIAEQRSITDGRVIPVGKGFVRKPPKRVDYLLRYTRDFPLGVVEAKAGYKLATD FT AVQQARDYAETLGLKFAYATNGIEIIEIDYFAGTEKRVADFPKPEELWRRYQAGSGMDTPERVDHLIAPYNTVGGKPPRY FT YQQIAINRTVESILAGKKRLLLTMATGTGKTIVAFQVCWKLWSSRWNKTGEHRKPRILFLADRNILIDDPKDKTFTPFGD FT ARHKIESGEIIKSREMYFAIYQALAEDERRAGLFRDYPPDFFDLIIVDECHRGSARDDSSWRVILEHFKPAYQLGMTATP FT LRQDNRDTYLYFGNPIYEYSLRQGIDDGFLAPYRVHRVITQWDAAGWRPSKDEVDRYGRAIPDDEYQTKDFERVIALRAR FT TQAIARHLTDFLRKTDRFAKTIVFCVDQEHASEMREALVNLNSDLIAQYPDYVARVTADEGTIGRGHLSRFQDVETKTPV FT ILTSSQLLTTGVDAPTCKNVVLARVVGSMSEFKQIIGRGTRLRDDYGKLWFNILDYTGAATRMFADPDFDGDPARITEEE FT VNDAGEATSTTETIPEGQEAEPATPEEGEPGVIEPPTGEPRKFYFDGGQVEVVAHLVHELDPNGKQLRVVKYTEYAAESI FT RSLAPTSADLRQRWADADQRREIIAALAERGIDFAVLAEQTGQTDADPFDLLCHLAFNAPLRTRRERAQRLKSERKDYFE FT KFSPEARQVLDDLLEKYAEHGDAQFVLPDVLKVPPISTHGQPAEIIKLFGGPDELRRAVNDLQGLLYGTN* FT " FT gene complement(304063..306435) FT /locus_tag="Nwi_0270" FT /colour=9 FT CDS complement(306432..306851) FT /locus_tag="Nwi_0271" FT /product="excisionase/Xis, DNA-binding" FT /note="TIGRFAM: Excisionase/Xis, DNA-binding: (3.4e-12)" FT /note="SPTR top hit: 'Q7MJF3 Hypothetical protein VV2209. FT Vibrio vulnificus (strain YJ016)., evalue=2e-14, 60% FT identity hit'" FT /note="KEGG top hit: 'vvy:VV2209 category=Unassigned, FT evalue=8e-15, 60.344828% identity hit'" FT /note="InterPro IPR010093" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=0 FT /translation="LWRACGKRDSRVEVAASRSQIDLWKSGDPSWPLATLRRLHKGSQGGRRLPALEFFSRIFADLPYNSPDSTCGERMADEIL FT TIREVAELLKINEKTAYKLAAAGKLPGFKVGGSWRFERQEIANWIRRKVEEQQGGNQGV* FT " FT gene complement(306432..306851) FT /locus_tag="Nwi_0271" FT /colour=0 FT CDS complement(307106..308380) FT /locus_tag="Nwi_0272" FT /product="phage integrase" FT /note="PFAM: Phage integrase: (1.4e-07)" FT /note="SPTR top hit: 'Q9T1Z2 Integrase. Bacteriophage FT TPW22., evalue=6e-12, 23% identity hit'" FT /note="KEGG top hit: 'bld:BLi01574 category=Unassigned, FT evalue=2e-11, 26.114650% identity hit'" FT /note="COGs: 'evalue=4e-09 score=56.5 category=L FT group=COG4973 Site-specific recombinase XerC'" FT /note="InterPro IPR002104" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=0 FT /translation="MSDIRKRVGRKGTTYQVRYPSKSSKTGYAYKTFATRKEALAFRDDSAARASAARPQSDSRTVEQGVQKWLDVCEKEGRNG FT REPVTKYTLANYRYRADIMLSYPWDKQLHELTKPDIIEFRSWLLQKHSRDVAQKVLLSFHSMIRELVGRGILQNDMAAGV FT SIAAASRYDTSVTIPSEADIMALLAAADRLANARNLKVQQSWQRYRPMLYLAVDSGMRPQEYLVLARSAIKETGVEVSRA FT LEGGGTAITVTKTRAGRRFIDLSAETLDMVRHYAEHHAVANRYDLVFPTETGKWLSIRNWRNRAFARACEEAGLMVEEEE FT NGEKVMRPKYRPYDLRHFYASMLIEQRVNLKRIQTLMGHRNIQTTLNVYGHLIERAEAVADKRTSVLSFVERDASTAPAD FT GVKSRSRPRKRKAASDASFLEAAE*" FT gene complement(307106..308380) FT /locus_tag="Nwi_0272" FT /colour=0 FT CDS complement(308686..308964) FT /locus_tag="Nwi_0273" FT /product="hypothetical protein" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=0 FT /translation="MKNGRGDFEPQGLTISYKELGTISIDELMHALIEDIHALKDLYNVQYVKGPRLRLFVTNEYGEVVRVRRPGGGSISYMDTHHYRPACRDYDL*" FT gene complement(308686..308964) FT /locus_tag="Nwi_0273" FT /colour=0 FT CDS 309187..309432 FT /locus_tag="Nwi_0274" FT /product="hypothetical protein" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=0 FT /translation="MEKAKATIIPLSPRGLSRAQAAAYIGVSPSLFDELVEDGRMPRPKRINSRTVWDRIRLDEAFEAILDDESRAANPWDDEDL*" FT gene 309187..309432 FT /locus_tag="Nwi_0274" FT /colour=0 FT CDS 309446..310525 FT /locus_tag="Nwi_0275" FT /product="phage integrase" FT /note="PFAM: Phage integrase: (5.2e-12)" FT /note="SPTR top hit: 'Q5FN31 Phage related integrase. FT Gluconobacter oxydans (Gluconobacter suboxydans)., FT evalue=6e-47, 38% identity hit'" FT /note="KEGG top hit: 'gox:GOX2485 category=Unassigned, FT evalue=3e-47, 38.719512% identity hit'" FT /note="COGs: 'evalue=1e-04 score=41 category=L FT group=COG4974 Site-specific recombinase XerD'" FT /note="InterPro IPR002104" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MVAFRMKDGTGKIELRYTYEDTDRHGNVRIYVRRPGMKKVRLRKTPGTPEFLEEYRDALAGRLELPSDKRPVRVPAGKGT FT LRWLCEQYYRSAEYKRLEPRTQHVRRLILDSICKRDGDKPYALMEPRHLRRRRDEKSDTPEAANGIVKALRQVFTFALEN FT DLAQRNPAKDVPYLKSGSEGFHSWNIEEVRQFEERHSVGSKARLALALLLYTGQRRSDVVALGRQHIRDGWFTFTQVKNR FT NRKPVTLSIPVRPELKAIIDATPSGNLTYLVTAFGKPFTANGFGNWFRERCDEAGLPHCSAHGLRKAAAARLAELGASES FT EIMAVTGHTTSKEIVRYTRGARQKVLAANAMARFGENKD*" FT gene 309446..310525 FT /locus_tag="Nwi_0275" FT /colour=11 FT tRNA complement(310616..310691) FT /locus_tag="Nwi_R0006" FT /gene="tRNA-Phe1" FT /note="anticodon GAA, Cove Score=88.73" FT /product="tRNA_Phe" FT /colour=8 FT CDS complement(310827..311024) FT /locus_tag="Nwi_0276" FT /product="Protein of unknown function DUF329" FT /note="PFAM: Protein of unknown function DUF329: FT (7.8e-16)" FT /note="SPTR top hit: 'Q89UZ9 Hypothetical UPF0243 FT zinc-binding protein bsr1260. Bradyrhizobium japonicum., FT evalue=4e-14, 65% identity hit'" FT /note="KEGG top hit: 'bja:bsr1260 category=Unassigned, FT evalue=2e-14, 65.384615% identity hit'" FT /note="COGs: 'evalue=9e-09 score=52.0 category=S FT group=COG3024 Uncharacterized protein conserved in FT bacteria'" FT /note="InterPro IPR005584" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=0 FT /translation="VPAGWMPVRKPARTRPDKPCPICGKPAAEDSRPFCSERCRDVDLNRWLSGSYAIPASRADDDDAE*" FT gene complement(310827..311024) FT /locus_tag="Nwi_0276" FT /colour=0 FT CDS complement(310999..311622) FT /locus_tag="Nwi_0277" FT /product="Maf-like protein" FT /note="TIGRFAM: Maf-like protein: (7.3e-46)" FT /note="PFAM: Maf-like protein: (6.5e-58)" FT /note="SPTR top hit: 'Q6N181 Putative septum formation maf FT protein. Rhodopseudomonas palustris., evalue=1e-100, 86% FT identity hit'" FT /note="KEGG top hit: 'rpa:RPA4527 maf2 FT category=Unassigned, evalue=1e-100, 86.956522% identity FT hit'" FT /note="COGs: 'evalue=6e-57 score=213 category=D FT group=COG0424 Nucleotide-binding protein implicated in FT inhibition of septum formation'" FT /note="InterPro IPR003697" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MSGRPKLVLASGSPRRLSLLNQAGIEPDALRPVDIDETPTKGELPRACANRLARAKADAALRALQIDDELRGSFILAADT FT VVAVGRRILPKADLVDEASQCLRLLSGRNHRVYTAVCLVTPKENFRQRLVETRVRFKRLSEEDIQAYIGSGEWRGKAGGY FT AIQGIAGSFVVKLVGSYTNVVGLPLNESIALLGGEEFPIRAGWLDAG*" FT gene complement(310999..311622) FT /locus_tag="Nwi_0277" FT /colour=9 FT CDS 311913..313109 FT /locus_tag="Nwi_0278" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q6N189 Hypothetical protein FT precursor. Rhodopseudomonas palustris., evalue=1e-153, 70% FT identity hit'" FT /note="KEGG top hit: 'rpa:RPA4519 category=Unassigned, FT evalue=1e-153, 70.942408% identity hit'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MLSRMIRRCHQIVAGALLLASLAEVPDSAAAPASFAGAMAQAASPAAIADYRRKLKAYQEARAAFEQEAGAYWNAIADKR FT RIRNAKRRDRQPVSLDDYVLVHPPLYDGPQRPINPEPEEERSPRQRKSIPVVADFLRAAAEQFQFTPQRPRTETDFKRAY FT ASVARAYGLTKEQAVRVYSFETGGNGNHDMQSGLSTSRPGSRAISTAIGYNQLLTTNSVELLAEQGDDLLRALGEKAARS FT SGPQRAAAERKIAVVKRMVAYARSVPDTWSAHQKLADTPKGWAIHALVLDIDVGPLLQTHKLLTSIIFARNKGYARPLTA FT AELEMMNLTGDGTGFDMVTMPPVMRERVPTANFFQRRGYERNPVAIRHNTVAKLLAVTNARMDSNSAKPGARELAAAF* FT " FT sig_peptide 311913..312005 FT /colour=11 FT /locus_tag="Nwi_0278" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.952) with cleavage site probability FT 0.413 atresidue 31" FT gene 311913..313109 FT /locus_tag="Nwi_0278" FT /colour=13 FT CDS 313329..314516 FT /locus_tag="Nwi_0279" FT /EC_number="2.3.1.16" FT /product="thiolase" FT /note="TIGRFAM: Thiolase: (1.3e-157)" FT /note="PFAM: Thiolase: (6.7e-74) Thiolase: (2.1e-59)" FT /note="SPTR top hit: 'Q6N3H9 Acetyl-CoA acetyltransferase FT (EC 2.3.1.9). Rhodopseudomonas palustris., evalue=0.0, 84% FT identity hit'" FT /note="KEGG top hit: 'rpa:RPA3715 pimB EC=2.3.1.9 FT category=Metabolism; Lipid Metabolism; Fatty acid FT biosynthesis (path 2) [PATH:rpa00062] Metabolism; Lipid FT Metabolism; Fatty acid metabolism [PATH:rpa00071] FT Metabolism; Lipid Metabolism; Synthesis and degradation of FT ketone bodies [PATH:rpa00072] Metabolism; Amino Acid FT Metabolism; Valine, leucine and isoleucine degradation FT [PATH:rpa00280] Metabolism; Amino Acid Metabolism; Lysine FT degradation [PATH:rpa00310] Metabolism; Amino Acid FT Metabolism; Tryptophan metabolism [PATH:rpa00380] FT Metabolism; Carbohydrate Metabolism; Pyruvate metabolism FT [PATH:rpa00620] Metabolism; Biodegradation of Xenobiotics; FT Benzoate degradation via CoA ligation [PATH:rpa00632] FT Metabolism; Carbohydrate Metabolism; Propanoate metabolism FT [PATH:rpa00640] Metabolism; Carbohydrate Metabolism; FT Butanoate metabolism [PATH:rpa00650] , evalue=0.0, FT 84.517766% identity hit'" FT /note="COGs: 'evalue=8e-71 score=261 category=I FT group=COG0183 Acetyl-CoA acetyltransferase'" FT /note="InterPro IPR002155" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=5 FT /translation="MTEAVIVSTARTPIGKAYRGALNATEGATLLGHAIGEAAVRAGVDPQEIEDVVMGVAMQQGATGGNIARKALLRAGLPVT FT VAGATIDRQCASGLQAIALAARSVLFDGVGIAVGGGGESISLVQNEHANTFHAEDPALLEIKREVYMPMIDTAEVVAKRY FT GISRQAQDEYALESQRRTAAAQQEGRFKDELAPISTRMAIVDKETGNVTFRDVTLSQDEGPRPDTSAEGLAGLKPVRGEG FT CTITAGNASQLSDGASAAVIMSGTEASRRGLNPLGIFRGFVSAGCEPDEMGIGPVFAVPRLLKRHGLTVGDIDLWELNEA FT FAVQVIYCRDRLGIDPEKLNVDGGAIAVGHPYGMSGARLAGHALIEGRRRKAKYAVVTMCVGGGMGAAGLFEVLQ* FT " FT gene 313329..314516 FT /locus_tag="Nwi_0279" FT /colour=5 FT CDS complement(314644..315042) FT /locus_tag="Nwi_0280" FT /product="hypothetical protein" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=0 FT /translation="MILAKMILAGSLLAIVGAAAPAQATPPTQQTPSAETRKGLVTVVNRLNGTIAIREEKNDKSKDKDEEDKHKDKDKDKDNK FT DKAEAEGATTQFRIDLKLSESVHAGDKVKFSVKDGGDPKTGTDKTITKIEVE*" FT gene complement(314644..315042) FT /locus_tag="Nwi_0280" FT /colour=0 FT sig_peptide complement(314968..315042) FT /colour=11 FT /locus_tag="Nwi_0280" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 1.000 atresidue 25" FT CDS 315223..316782 FT /locus_tag="Nwi_0281" FT /EC_number="2.7.1.30" FT /product="glycerol kinase" FT /note="TIGRFAM: Glycerol kinase: (2.3e-296)" FT /note="PFAM: Carbohydrate kinase, FGGY: (1.2e-103) FT Carbohydrate kinase, FGGY: (3.1e-61)" FT /note="SPTR top hit: 'Q89UK6 Glycerol kinase (EC 2.7.1.30) FT (ATP:glycerol 3-phosphotransferase) (Glycerokinase) (GK). FT Bradyrhizobium japonicum., evalue=0.0, 82% identity hit'" FT /note="KEGG top hit: 'bja:blr1410 glpK EC=2.7.1.30 FT category=Metabolism; Lipid Metabolism; Glycerolipid FT metabolism [PATH:bja00561] , evalue=0.0, 82.164329% FT identity hit'" FT /note="COGs: 'evalue=0.0 score=736 category=C FT group=COG0554 Glycerol kinase'" FT /note="InterPro IPR000577:IPR005999" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=3 FT /translation="LPLWRVAPPPRARKFENNVMVTHVLAIDQGTTSSRAIVFRADLTVAAIAQQEFPQHFPASGWVEHEPEDIWTSTVATCRQ FT AMKKAGVTPKDIAAIGITNQRETTVVWDRVTGKAVRRAIVWQDRRTADVCARLKAEGHEPAISAKTGLIIDPYFSGTKVA FT WILDSVPGARARAMRGELMFGTVDCYLLWRLTGGKVHATDATNASRTMLFDIHTGHWDDALLDILRIPRAMLPEVKDSSA FT HFGDSAPELFGAPIAIRGIAGDQQAAVVGQACFTPGMIKSTYGTGCFALLNTGATPVASTNKLLTTIAYQLNGERTYALE FT GSIFVAGSAVQWLRDGLGLIKNASETEPLAEQSDPVQSVYLVPAFVGMGAPYWNPNVRGALFGLTRNTGPAELAHAALES FT VCYQTFDLWEAMRADWPADAAAHTVLGVDGGMTASNWTMQRLADLLGVPVDRPVIQETTALGAAYLAGLSAGVYPEPSRF FT ADNWRRDRCFKPAMSAETRARKLKGWTAAVRGVLASDEG*" FT gene 315223..316782 FT /locus_tag="Nwi_0281" FT /colour=3 FT CDS complement(316829..317254) FT /locus_tag="Nwi_0282" FT /product="Transcriptional regulator" FT /note="TIGRFAM: PAS: (6.8e-22)" FT /note="PFAM: PAS: (7.1e-16)" FT /note="SMART: PAS: (1.5e-14)" FT /note="SPTR top hit: 'Q747W3 Sensory box protein. FT Geobacter sulfurreducens., evalue=3e-28, 52% identity FT hit'" FT /note="KEGG top hit: 'gsu:GSU3152 category=Unassigned, FT evalue=8e-29, 52.066116% identity hit'" FT /note="COGs: 'evalue=1e-06 score=46.0 category=T FT group=COG3829 Transcriptional regulator containing PAS FT AAA-type ATPase and DNA-binding domains'" FT /note="InterPro IPR000014:IPR000700" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="VDASAIAAALLDSSADAIVATDRNGTITLWNPGAVRIFGHSADEATGQSLDLIIPENQRARHWAGYREVMLTGRSRYSDG FT DVLAVPALHKDGRRISLEFTIVPLTDASGRINGLASVLRDVTARFEEIRQLRRKAAVALRT* FT " FT gene complement(316829..317254) FT /locus_tag="Nwi_0282" FT /colour=11 FT CDS complement(317257..321129) FT /locus_tag="Nwi_0283" FT /EC_number="2.1.1.13" FT /product="5-methyltetrahydrofolate--homocysteine FT methyltransferase" FT /note="TIGRFAM: 5-methyltetrahydrofolate--homocysteine FT methyltransferase: (0)" FT /note="PFAM: Dihydropteroate synthase, DHPS: (1.9e-73) FT Homocysteine S-methyltransferase: (9.1e-134) Methionine FT synthase, B12-binding module, cap: (1.5e-44) Vitamin B12 FT dependent methionine synthase, activation region: FT (3.2e-142) Cobalamin B12-binding: (5.2e-29)" FT /note="SPTR top hit: 'Q89UJ8 Methionine synthase. FT Bradyrhizobium japonicum., evalue=0.0, 83% identity hit'" FT /note="KEGG top hit: 'bja:bll1418 metH EC=2.1.1.13 FT category=Metabolism; Amino Acid Metabolism; Methionine FT metabolism [PATH:bja00271] Metabolism; Metabolism of FT Cofactors and Vitamins; One carbon pool by folate FT [PATH:bja00670] , evalue=0.0, 83.110762% identity hit'" FT /note="COGs: 'evalue=0.0 score=1161 category=E FT group=COG1410 Methionine synthase I cobalamin-binding FT domain'" FT /note="InterPro FT IPR000489:IPR003726:IPR003759:IPR004223:IPR006158:IPR011822" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=10 FT /translation="MTRVTKSSNTIADKFRALARERILVLDGAMGTMIQNRGFDEAAFRGERFKNFHRDVRGNNDLLILTQPQAIEDIHAQYLR FT AGADLVATNTFSSTSIAQADYDMSDLVYELNREGAKLARSAAEKVSAEDGKPRFVVGAIGPTNRTASISPDVANPGYRAV FT TFDDLRKSYGEQINGLLDGGADLLLVETIFDTLNAKAALYAIAEIGEQRGIDIPVMVSGTITDKSGRLLSGQLPEAFWHS FT VRHAGPITIGFNCALGAEDLRAHVAEIGRVADTLVCAYPNAGLPNEFGEYDESPDYMARLIGEFAQAGLVNVVGGCCGTT FT PDHIAAIAAAVAPHKPRVVPVIEPRLRLSGLEPFSLTSDIPFVNVGERTNVTGSAKFRNLIKAGDYAAALDVARNQVENG FT AQIIDVNMDEGLLDSEAAMVTFLNLIAAEPDIARVPVMVDSSKFSVIEAGLKCLQGKPVVNSISLKEGEEKFLHEARIAR FT RHGAAVVVMAFDEQGQADTCQRKMEICKRAYDILVEQVGFPPEDIIFDPNIFAIATGLEEHNNYGVDFIEATRWIRQNLP FT HAHISGGVSNLSFSFRGNEPVREAMHSVFLYHAIKAGMDLGIVNAGQMVIYDDIDPELRQVCEDVVLNRDPDAGERLLNL FT AEKFRGQGKQAKEADLSWREWPVEKRLSHALVNGITEYIEQDTEEARKSADRPLSVIEGPLMAGMNVVGDLFGDGKMFLP FT QVVKSARVMKHAVAYLMPFMEEEKARNQAAGIEGAGSTSAGKILLATVKGDVHDIGKNIVGIVLQCNNYEVIDLGVMVPA FT AKIIETAKAEKADIVGLSGLITPSLDEMGYFAAELERQGLNLPLLIGGATTSRVHTAVKIDPNYRNGPVIHVNDASRAVG FT VVASLMSPERREAYAAGVRAEYAKISAAHFRAQQDKKRLPLAAARANAVPIDWSSYRPVKPTFLGTKAFADYPLEELVEV FT IDWTPFFQVWELAGRFPAILDDKVVGETARALYDDARKMLDRIVKEKWFTASSVIGFWPANRIGDDIAVYSDESRTTQIA FT TYHTLRQQLEKREGRHNAALADFIAPKETGIADYIGGFAVTAGLGEDEIAARFKNANDDYSSILVKALADRLAEAFAERM FT HQRVRTEFWGYAPDEALTNDQLIREEYVGIRPAPGYPAQPDHTEKATLFRLLDATRATGVELTESFAMWPGSSVSGLYYS FT HPESQYFGVGKIERDQVEDYAARKGMEVAEIERWLASILNYIPGQDASGKPATTPVPAPANDASADVANHPPGCQCAVHL FT RLRKTTARAG*" FT gene complement(317257..321129) FT /locus_tag="Nwi_0283" FT /colour=10 FT CDS complement(321190..322221) FT /locus_tag="Nwi_0284" FT /product="5,10-methylenetetrahydrofolate reductase" FT /note="TIGRFAM: 5,10-methylenetetrahydrofolate reductase: FT (6.5e-151)" FT /note="PFAM: Methylenetetrahydrofolate reductase: FT (5.6e-114)" FT /note="SPTR top hit: 'Q89UJ7 FT 5,10-methylenetetrahydrofolate reductase. Bradyrhizobium FT japonicum., evalue=1e-144, 83% identity hit'" FT /note="KEGG top hit: 'bja:bll1419 metF EC=1.7.99.5 FT category=Metabolism; Metabolism of Cofactors and Vitamins; FT One carbon pool by folate [PATH:bja00670] Metabolism; FT Energy Metabolism; Methane metabolism [PATH:bja00680] , FT evalue=1e-144, 83.606557% identity hit'" FT /note="COGs: 'evalue=2e-76 score=279 category=E FT group=COG0685 5 10-methylenetetrahydrofolate reductase'" FT /note="InterPro IPR003171:IPR004620" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=10 FT /translation="MGYAGGNAVPRMAGPTPGVSRPTAVTRARRDRCSGVFRAMTDAFAPAHDGLGARKRPTISFEFFPPKTEEMERNLWGTIT FT RLAPLDPSFVSVTYGAGGSTRERTHSTIARILSDTRLRPAAHLTCVGAPRGEIDEIVSRYRDIGVRHIVALRGDPPGGIG FT TAYSTHPEGYRTSADLVAGIKRRHGDIEISVSAYPEKHPESPDIDTDIDVLKAKVDAGATRAITQVFFDNNLYLRYLDRV FT RARGIDIPIVPGIMPMHNFKQARAFVTKAGTTVPAWLAEKFEGLDEDPETRKLIAATVAAGQVQKLAKRGVDTFHFYTMN FT RADLVFAICHLLGIRPDAAQKAA*" FT gene complement(321190..322221) FT /locus_tag="Nwi_0284" FT /colour=10 FT CDS complement(322432..323292) FT /locus_tag="Nwi_0285" FT /EC_number="4.2.1.51" FT /product="prephenate dehydratase" FT /note="PFAM: Prephenate dehydratase: (2.4e-36)" FT /note="SPTR top hit: 'Q89UJ5 Prephenate dehydratase. FT Bradyrhizobium japonicum., evalue=1e-132, 81% identity FT hit'" FT /note="KEGG top hit: 'bja:bll1421 pheA EC=4.2.1.51 FT category=Metabolism; Amino Acid Metabolism; Phenylalanine, FT tyrosine and tryptophan biosynthesis [PATH:bja00400] , FT evalue=1e-132, 81.720430% identity hit'" FT /note="COGs: 'evalue=3e-83 score=302 category=E FT group=COG0077 Prephenate dehydratase'" FT /note="InterPro IPR001086" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=10 FT /translation="MTRTMKIVFQGEPGANSHIAIAEAYPDAEPLPCATFEDALAAITSGEADLGMIPIENSVAGRVADIHHLLPQSGLFIVGE FT YFLPVRHQLMAPRGARLADIKTVESHVHALGQCRRIIRKLGIRPIVSGDTAGAARLVAERGDTSCAALASRLASQIHHLD FT ILAENVEDEDHNTTRFVVLAREADWARQGSGPLVTSFIFQVRNLPAALYKAMGGFATNSVNMTKLESYMVDGNFLATQFY FT ADVEGHPNDRGLAFALEELKFFSKELRIVGVYPAHPFRATFRERAD*" FT gene complement(322432..323292) FT /locus_tag="Nwi_0285" FT /colour=10 FT CDS complement(323304..324068) FT /locus_tag="Nwi_0286" FT /EC_number="2.7.7.38" FT /product="3-deoxy-D-manno-octulosonate FT cytidylyltransferase" FT /note="TIGRFAM: 3-deoxy-D-manno-octulosonate FT cytidylyltransferase: (1.8e-72)" FT /note="PFAM: Acylneuraminate cytidylyltransferase: FT (9.3e-56)" FT /note="SPTR top hit: 'Q89UJ4 3-deoxy-manno-octulosonate FT cytidylyltransferase. Bradyrhizobium japonicum., FT evalue=1e-106, 78% identity hit'" FT /note="KEGG top hit: 'bja:bll1422 kdsB EC=2.7.7.38 FT category=Metabolism; Glycan Biosynthesis and Metabolism; FT Lipopolysaccharide biosynthesis [PATH:bja00540] , FT evalue=1e-107, 78.861789% identity hit'" FT /note="COGs: 'evalue=6e-83 score=300 category=M FT group=COG1212 CMP-2-keto-3-deoxyoctulosonic acid FT synthetase'" FT /note="InterPro IPR003329:IPR004528" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MTENRTLVLIPARMAATRLPGKPLLDIGGLPMIVHVLRRAEAAGIGRVAVATDTSDIATAVTAHGGEAIMTRADHPSGSD FT RVFEALGKLDPEGRIDTVVNLQGDFPTIRPGTIREVLQPLADNAVDIATLAAEIHTEEEAANPNVVKAVGSPIGPRRLRA FT LYFTRATAPHGEGPRYHHVGLYAYRREALQRFIELPPSPLEQQERLEQLRALEGGMRIDIMIVDDVPRGVDTATDLETAR FT QIIACSASGEHPAR*" FT gene complement(323304..324068) FT /locus_tag="Nwi_0286" FT /colour=9 FT CDS 324262..324819 FT /locus_tag="Nwi_0287" FT /product="cytochrome c, class I" FT /note="PFAM: Cytochrome c, class I: (3.8e-31)" FT /note="SPTR top hit: 'P30323 Cytochrome c homolog. FT Bradyrhizobium japonicum., evalue=6e-57, 59% identity FT hit'" FT /note="KEGG top hit: 'bja:blr1423 cycM FT category=Unassigned, evalue=3e-57, 59.893048% identity FT hit'" FT /note="COGs: 'evalue=2e-33 score=135 category=C FT group=COG3474 Cytochrome c2'" FT /note="InterPro IPR002327:IPR003088" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=3 FT /translation="MINKFIGAVLGTCLVLLVMNLIARAVFAPAVPAKPGYKIDVKEEPAAVQKDDKPVAASKAAAASKEADVAAAVSLGKRLQ FT AASAENGAVVAKKCAACHTFEKGGPNRVGPNLYGIVGEPRGQGHDFNFSAAMKAKGGTWTLDELDKFLANPKEYIPGTAM FT SFVGVPKDSDRADLIAYLRKNSDKP*" FT sig_peptide 324262..324339 FT /colour=11 FT /locus_tag="Nwi_0287" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.996) with cleavage site probability FT 0.954 atresidue 26" FT gene 324262..324819 FT /locus_tag="Nwi_0287" FT /colour=3 FT misc_feature 324274..324342 FT /colour=11 FT /locus_tag="Nwi_0287" FT /note="1 probable transmembrane helix predicted FT byTMHMM2.0" FT CDS 325344..327239 FT /locus_tag="Nwi_0288" FT /product="extracellular solute-binding protein, FT family 5" FT /note="PFAM: Bacterial extracellular solute-binding FT protein, family 5: (1.5e-62)" FT /note="SPTR top hit: 'Q89UJ3 ABC transporter FT substrate-binding protein. Bradyrhizobium japonicum., FT evalue=0.0, 72% identity hit'" FT /note="KEGG top hit: 'bja:blr1424 category=Unassigned, FT evalue=0.0, 72.468354% identity hit'" FT /note="COGs: 'evalue=6e-89 score=321 category=E FT group=COG4166 ABC-type oligopeptide transport system FT periplasmic component'" FT /note="InterPro IPR000914" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=10 FT /translation="LAFTRRRLLHGGALIAAAPAIKVLTGASSIQAAHAQAAPAGLKWRHGLSLFGEVKYPEGFKHFDYVNPDAPKGGLVRQIA FT IGTFDNFNPVVSGVKGSIASEVRLVYEALTAPSLDEVSTEYGALAESVAYPDDFSFVVYRLRAEAKWHDGKPVTPDDVIF FT SLNVLKKHHPFYGAYYRHITKVEKTGERDVTFTFDAPGNRELPQIVGQLMVLPKHWWEGTDDAGRKRDISATTLEPPLGS FT GPYRIKRFDAARSVTLERVKDYWGRDLNFSIGHNNFDELRYEYFRDGTVALEAFKGDQVDWRTENSAKNWATAYDFPAVK FT DGRVILEEFPNRNAGVMQAFALNIRRDKFRDPRVRRALNFAFNFEEMNKQLFYGQYKRINSYFEGTELASSGLPEGRELE FT ILETVRAEVPAEVFTTPYSNPVGGNPKAVRNNLREGMKLFKEAGFEVRNHKLVDGKTGAPFELELLSEAPSTERIMLFYK FT PSLERMGITVSVRTVDSTQYENRMRSWDFDVVGNLWIESLSPGNEQREFWGSQAADMPGSRNVVGIKNPAVDKLIERVIF FT AKDRADLVAATKALDRVLLWNHYVVPQFTYPFHRTARWDRFGRPEKMPKYGLSAFPTLWWHDAGKAAGKRS* FT " FT sig_peptide 325344..325451 FT /colour=11 FT /locus_tag="Nwi_0288" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.976) with cleavage site probability FT 0.743 atresidue 36" FT gene 325344..327239 FT /locus_tag="Nwi_0288" FT /colour=10 FT CDS 327254..329152 FT /locus_tag="Nwi_0289" FT /product="extracellular solute-binding protein, FT family 5" FT /note="PFAM: Bacterial extracellular solute-binding FT protein, family 5: (1.1e-41)" FT /note="SPTR top hit: 'Q6N3K2 Putative ABC transporter, FT solute-binding protein precursor. Rhodopseudomonas FT palustris., evalue=0.0, 76% identity hit'" FT /note="KEGG top hit: 'rpa:RPA3691 category=Unassigned, FT evalue=0.0, 76.228209% identity hit'" FT /note="COGs: 'evalue=2e-72 score=266 category=E FT group=COG4166 ABC-type oligopeptide transport system FT periplasmic component'" FT /note="InterPro IPR000914" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=10 FT /translation="MSRPSRRQVFGLGIGAAGAAWLRPAVAVAANGAEPNPHGESQGQSHGMSAFGDLKYPADFHHFDYVNPDAPKGGLFATIP FT SSRAFNQSFQTFNSLNAFILKGDGAQGMGMTFTSLMARAGDEPDAMYGLAAKSVRISADGLTYRFTMRPEARFHDGQKIT FT ARDAAFSLMVLKTKGHPLITQQVRDMVKAEAPDDATLVVTFAAKRGRDVPLFVAGLPIFSQAYYTARPFDETTLDVPLGS FT GPYKVGRFEANRFIEFDRVKDWWGADLPVCRGAYNFDTVRFDFYRDRDVAFEGFTGRSYLYREEFTSRIWNTRYDFPAMT FT DGRVKREQLPDETPSGAQGWFINTRRDKFKDPRVREALDCAFDFEWTNKSIMYGAYVRTVSPFQNSDLMASGPPSQEEVA FT LLEPFRGKVPDEVFGNPYTPLVSDGSGQDRKQLRRAAQLLDEAGFHIKDRKRMTPRGEVFRLEFLLDEPAFQAHHMPYIK FT NLQTLGIEATLRLVDPVQSRSRRDDFDFDIIIERFSFSTIPGDSLRPFFSSRAAATKGSNNLAGIADPAIDALMEQVIVA FT DTRARLVFAARALDRVIRAGRYWVPQWYSNTHRLAYWDVFAHPPSLPKYLGVMAPDIWWSTQARPASSGQAG* FT " FT sig_peptide 327254..327337 FT /colour=11 FT /locus_tag="Nwi_0289" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.998) with cleavage site probability FT 0.477 atresidue 28" FT gene 327254..329152 FT /locus_tag="Nwi_0289" FT /colour=10 FT CDS 329155..330264 FT /locus_tag="Nwi_0290" FT /product="Binding-protein-dependent transport systems FT inner membrane component" FT /note="PFAM: Binding-protein-dependent transport systems FT inner membrane component: (1.9e-46)" FT /note="SPTR top hit: 'Q6N3K3 Peptide ABC transporter, FT permease protein precursor. Rhodopseudomonas palustris., FT evalue=0.0, 89% identity hit'" FT /note="KEGG top hit: 'rpa:RPA3690 category=Unassigned, FT evalue=0.0, 89.972900% identity hit'" FT /note="COGs: 'evalue=1.0e-161 score=560 category=R FT group=COG4174 ABC-type uncharacterized transport system FT permease component'" FT /note="InterPro IPR000515" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MSAYIVRRILLMLPTLLGILFVSFVVVQFAPGGPVERVIAQLSGSDTGGMSRISGSSGGDFGARGQVGASSDAVNSKYRG FT AQGLDPAFIKSLEQQFGFDKPAHERFLLMVWNFARFDFGKSYFRDTTVIELIKEKLPVSMSLGIWMTLLTYLISIPLGIR FT KAVKDGSQFDTWTSAVIIVGFAIPGFLFAILLIVLFAGGSFFSIFPLRGLTSDGWNEFPWYWKILDYFWHLTLPLISMAL FT GAFATMTLLTKNSFLDEIRKQYVMTARAKGCSERQVLYNHVFRNAMLIVIAGFPGAFVHAFFSGSLLIETIFSLDGLGLL FT GFESVLNRDYPVVFGTLYIFSLVGLVVNLISDLTYMWIDPRIDFEAREV*" FT sig_peptide 329155..329238 FT /colour=11 FT /locus_tag="Nwi_0290" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.882) with cleavage site probability FT 0.517 atresidue 28" FT gene 329155..330264 FT /locus_tag="Nwi_0290" FT /colour=11 FT misc_feature join(329179..329247,329575..329643,329680..329748,329836..329904,330010..330078,330148..330207) FT /colour=11 FT /locus_tag="Nwi_0290" FT /note="6 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 330270..331442 FT /locus_tag="Nwi_0291" FT /product="Binding-protein-dependent transport systems FT inner membrane component" FT /note="PFAM: Binding-protein-dependent transport systems FT inner membrane component: (1.9e-40)" FT /note="SPTR top hit: 'Q6N3K4 Peptide ABC transporter, FT permease protein. Rhodopseudomonas palustris., evalue=0.0, FT 87% identity hit'" FT /note="KEGG top hit: 'rpa:RPA3689 category=Unassigned, FT evalue=0.0, 87.272727% identity hit'" FT /note="COGs: 'evalue=1.0e-143 score=501 category=R FT group=COG4239 ABC-type uncharacterized transport system FT permease component'" FT /note="InterPro IPR000515" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MTSTTPVEAGATSPLGEAVPPARHSLGMSPLNRRRWQNFKANRRGYWSLWIFLILFGLSLFAELIANDRPFLIRFDGHLY FT FPAFVTYPETAFGGDFETAADYRDPYLQKLIADKGGTIVWPPIRYSYDTHNLDLPTPAPSKPTWLLTEAECKDVVQRKNL FT SGCRDLEYNWLGTDDQGRDVVARLIYGFRISVLFGLCLTIVSSVIGIAAGGVQGYFGGWVDLGFQRFIEVWTAIPSLYLL FT LILSSILVPGFFVLLGILLLFSWVSLVGLVRAEFLRGRNFEYITAARALGVSNATIMFRHLLPNAMVATMTFLPFIVSSS FT VMTLTALDFLGFGLPPGSPSLGEMLAQGKANVQAPWLGFTGFFSLAIMLSLLIFIGEAVRDAFDPRKTFR* FT " FT gene 330270..331442 FT /locus_tag="Nwi_0291" FT /colour=11 FT misc_feature join(330405..330464,330837..330905,331011..331079,331203..331271,331329..331397) FT /colour=11 FT /locus_tag="Nwi_0291" FT /note="5 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 331452..333089 FT /locus_tag="Nwi_0292" FT /EC_number="3.6.3.29" FT /EC_number="3.6.3.25" FT /product="ABC transporter, ATPase subunit" FT /note="PFAM: ABC transporter, ATPase subunit: (6.3e-56)" FT /note="SMART: ATPase (3.9e-18)" FT /note="SPTR top hit: 'Q6N3K5 Peptide ABC transporter, FT ATP-binding protein. Rhodopseudomonas palustris., FT evalue=0.0, 88% identity hit'" FT /note="KEGG top hit: 'rpa:RPA3688 category=Unassigned, FT evalue=0.0, 88.807339% identity hit'" FT /note="COGs: 'evalue=0.0 score=813 category=R FT group=COG4172 ABC-type uncharacterized transport system FT duplicated ATPase component'" FT /note="InterPro IPR001687:IPR003439:IPR003593" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MDAIDQPLLDVRDLSVAFHHGGGTSVAVDRISFDIKRGECVALVGESGSGKSVSALSVLKLLPYPAASHPSGHIRFNGRE FT LLGLSEREIRSIRGNDISIIFQEPMTSLNPLHTIEAQIGEILLLHGGVRGAAARKRTLELLTQVGIPEPETRLPSYPHQL FT SGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILALLAEIRARLGMSLLFITHDLGIVRRIADRVCVMNGGKIVE FT QGPVEQVFESPQHPYTRELLAAEPKPDPAPPRPDAPVVIATDNLKVWFPIRRGLLRKTIGHIKAVDGVTLKVRQGETLGV FT VGESGSGKTTLGLALLRLISSDGPIVFLGKDIQGLRFKEMRPFRRDMQIVFQDPFGALSPRMSVGDIVAEGLSVHQGSLS FT ETEREARVVKALTDVGLDPATRFRYPHEFSGGQRQRISIARAVVLEPNFVVLDEPTSALDMLFQAQMVDLLRELQRKRDL FT TYMFISHDLRVVASLASHLIVMRQGKVVEEGPASELFRNPQSDYTRALFAAAFRLETAPGEAGAE* FT " FT gene 331452..333089 FT /locus_tag="Nwi_0292" FT /colour=11 FT CDS complement(333090..333935) FT /locus_tag="Nwi_0293" FT /product="Cell wall-associated hydrolases" FT /note="PFAM: NLP/P60: (1.5e-10)" FT /note="SPTR top hit: 'Q89UI7 Bll1430 protein. FT Bradyrhizobium japonicum., evalue=1e-109, 66% identity FT hit'" FT /note="KEGG top hit: 'bja:bll1430 category=Unassigned, FT evalue=1e-109, 66.906475% identity hit'" FT /note="COGs: 'evalue=1e-12 score=68 category=M FT group=COG0791 Cell wall-associated hydrolases FT (invasion-associated proteins)'" FT /note="InterPro IPR000064" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MDDPRLTPARPEVAARYLEGRVDAARFTDGEEFEVVEAAAPLQREPAPDAMLQTQALRGERVTVYDHDAEGWAWGQLNGD FT GYVGWLPDRALARPGPAPTHKVTALRTFAFPGPSIKLPPLETFSLGARLTVQRHDGCFAVTDDRLYIPAPHVAPLDHSAA FT DFVTVAEMFVGTPYLWGGKTSLGIDCSGLVQVALNASGIACPRDSDMQEAAIGRTLSPQEAQQPRRGDLMFWKGHVAIVR FT NEATLLHANAHHMATAIEGIHDAVTRIKAAGSDVTSVKRLA*" FT gene complement(333090..333935) FT /locus_tag="Nwi_0293" FT /colour=9 FT CDS complement(333928..335316) FT /locus_tag="Nwi_0294" FT /EC_number="3.4.11.1" FT /product="peptidase M17, leucyl aminopeptidase" FT /note="PFAM: Peptidase M17, leucyl aminopeptidase, FT C-terminal: (3.8e-85) Peptidase M17, leucyl FT aminopeptidase, N-terminal: (1.2e-09)" FT /note="SPTR top hit: 'Q89UI6 Aminopeptidase. FT Bradyrhizobium japonicum., evalue=0.0, 74% identity hit'" FT /note="KEGG top hit: 'bja:bll1431 EC=3.4.11.1 FT category=Unassigned, evalue=0.0, 74.620390% identity hit'" FT /note="COGs: 'evalue=1.0e-116 score=411 category=E FT group=COG0260 Leucyl aminopeptidase'" FT /note="InterPro IPR000819:IPR008283" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=10 FT /translation="MHPAFATTPAEKAVPIILASKAAWEADGDSLDDSARRFAEANGFQAKSGQYLALPTTNGDISRILFGLGEKPDQTRDPFL FT AGKLPGLLPPGAFRFADTATANDMHLATLAFALGSYRFDRYRKADAPKARLAPPDGVDIADISRMAEAASLARDLINTPA FT NDMGPEDLATAARNLARRFDAEFNCIVGDDLMQRNFPLIHAVGMASPRAPRLIDLTWGDPAHPMVTLVGKGVCFDTGGVD FT LKTASGMQIMKKDMGGAANVLALALMVMDAKLKVRLRVLIPAVENAVAGNAFRPLDIFPSRKGLSVEIGNTDAEGRLVLA FT DALALADEEAPELLIDVGTLTGAARVALGPDLPPFYTSDENLASDLARCGKTENDPLWRMPLWPAYDAWLDSKIADINNA FT PSGGFAGSIVCALFLQRFVEAAKTWLHVDIYGWTPSAKPARPEGGECQAARAIYRLLSERYG* FT " FT gene complement(333928..335316) FT /locus_tag="Nwi_0294" FT /colour=10 FT CDS 335445..336317 FT /locus_tag="Nwi_0295" FT /product="TPR repeat protein" FT /note="PFAM: TPR repeat: (0.3) TPR repeat: (0.00038)" FT /note="SMART: TPR repeat: (0.3)" FT /note="SPTR top hit: 'Q6N3K9 TPR repeat precursor. FT Rhodopseudomonas palustris., evalue=1e-90, 65% identity FT hit'" FT /note="KEGG top hit: 'rpa:RPA3684 category=Unassigned, FT evalue=6e-91, 65.250965% identity hit'" FT /note="COGs: 'evalue=1e-35 score=143 category=U FT group=COG5010 Flp pilus assembly protein TadD contains TPR FT repeats'" FT /note="InterPro IPR001440" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MKSTMRRQSCLARLLASSTVTAMLAIGLGGCQTAAISDVTGSLGAKAETKSEKHSGTDPHRTVEVYGERFRANPKDADAA FT LRYGLALRAIGQRAQAVAVLERAAILNPGNKVVLAGWGRALAENGQSQQAFDVLSRAHTPASPDWRILSVQGTTLDKLGR FT HDDARRYYASALRIMPDEPSVLSNLGMSYVLTKELPKAEETLRRAHAGAPVDSRIRQNLALAVGLQGRFDEAENIVKADL FT PIDEAAANVAYLKQMLGRGGDARVGAADNVRRNSRRSRADSDPRPDRPVS*" FT sig_peptide 335445..335549 FT /colour=11 FT /locus_tag="Nwi_0295" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.998) with cleavage site probability FT 0.395 atresidue 35" FT gene 335445..336317 FT /locus_tag="Nwi_0295" FT /colour=9 FT CDS complement(336475..337452) FT /locus_tag="Nwi_0296" FT /product="type II secretion system protein" FT /note="PFAM: Bacterial type II secretion system protein: FT (4.7e-14)" FT /note="SPTR top hit: 'Q89UI3 Pilus assemble protein. FT Bradyrhizobium japonicum., evalue=1e-141, 77% identity FT hit'" FT /note="KEGG top hit: 'bja:bll1434 ctpI FT category=Unassigned, evalue=1e-142, 77.881620% identity FT hit'" FT /note="COGs: 'evalue=3e-28 score=119 category=U FT group=COG2064 Flp pilus assembly protein TadC'" FT /note="InterPro IPR001992" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MLDILIEKFHNPQFMTMVLAAIAASATVYTLITPFFAADGLTKRMKAVASERERIRLRERERLARTEKVSLRQAPKQFIS FT KIVEDLNLGKWVAQEAAREKLVMAGYRGQAPYVTFLFFRMVTPIVMLIGAIAYVFLLSHTQQSTTVKLGICIGATFFGMQ FT APMLFLHNAITKRQLSIKRAFPDALDLLLICLESGMSIEVAFRKVSTETGNQSVALAEELTLTTAELSYLQDRKVAYENL FT ANRTGVEGVKSVCLALQQSERYGTPLAQSLRVMAQENRDMRMTEAEKKAAALPPKLTVPMIVFFLPVLFVVILGPTGIKI FT AAQMH*" FT gene complement(336475..337452) FT /locus_tag="Nwi_0296" FT /colour=9 FT misc_feature complement(join(336499..336564,336943..337008,337042..337107,337342..337407)) FT /colour=11 FT /locus_tag="Nwi_0296" FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(337360..337452) FT /colour=11 FT /locus_tag="Nwi_0296" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.648) with cleavage site probability FT 0.410 atresidue 31" FT CDS complement(337465..338439) FT /locus_tag="Nwi_0297" FT /product="type II secretion system protein" FT /note="PFAM: Bacterial type II secretion system protein: FT (1e-14)" FT /note="SPTR top hit: 'Q89UI2 Pilus assembly protein. FT Bradyrhizobium japonicum., evalue=1e-135, 73% identity FT hit'" FT /note="KEGG top hit: 'bja:bll1435 ctpH FT category=Unassigned, evalue=1e-135, 73.846154% identity FT hit'" FT /note="COGs: 'evalue=4e-65 score=241 category=U FT group=COG4965 Flp pilus assembly protein TadB'" FT /note="InterPro IPR001992" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MNLQTLALAFMAATAVGGVAWVFLYPVLSGEMKAEKRRAALARTSPAIRQVDRAQRSRREQIEESLREIEQRQKRDRKVT FT LNNRIAQAGLSWSKEKFLIVSGILALASFAVPIVLGAGPLAAAGLAFAAGFGVPRWLLGFLKKRRETAFLRALPDAVDVI FT VRGIKAGLPLFESLKVVAADSPEPLKSEFAAIIETQAIGMPLGEACSRLYERMPVPEANFFGIVIAIQQKSGGNLSEALG FT NLSKVLRDRKKMAEKIKAVSMEAKASAAIIGSLPPIVMLLVYLSTPDYIALLWTHPTGRLMLAGSALWMTAGILVMKKMI FT NFDF*" FT gene complement(337465..338439) FT /locus_tag="Nwi_0297" FT /colour=9 FT misc_feature complement(join(337492..337542,337588..337644,338023..338079,338092..338148,338356..338421)) FT /colour=11 FT /locus_tag="Nwi_0297" FT /note="5 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(338371..338439) FT /colour=11 FT /locus_tag="Nwi_0297" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.993) with cleavage site probability FT 0.484 atresidue 23" FT CDS complement(338452..339918) FT /locus_tag="Nwi_0298" FT /product="type II secretion system protein E" FT /note="PFAM: Bacterial type II secretion system protein E: FT (4e-102)" FT /note="SPTR top hit: 'Q89UI1 Pilus assembly protein. FT Bradyrhizobium japonicum., evalue=0.0, 87% identity hit'" FT /note="KEGG top hit: 'bja:bll1436 ctpG, cpaF FT category=Genetic Information Processing; Folding, Sorting FT and Degradation; Type II secretion system [PATH:bja03090] FT , evalue=0.0, 87.063655% identity hit'" FT /note="COGs: 'evalue=1.0e-132 score=464 category=U FT group=COG4962 Flp pilus assembly protein ATPase CpaF'" FT /note="InterPro IPR000217:IPR001482:IPR001687" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="VFGKRSGPEDNARKLASLTEVMPPPSNARASAEIASPKIASPPLAPPRPAAQTPSIDARRSDTYYQVKATIFGALIEAID FT LAQLAKLDGESAREEIRDIVNEIIAIKNIVMSIAEQEELLDDICNDVLGYGPLEPLLSRDDIADIMVNGAGTVFIEVAGK FT IQRTGIRFRDNQQLLNICQRIVSQVGRRVDESSPICDARLADGSRVNAIVPPLAIDGPALTIRKFKKDKLTLDQLVRFGA FT ITPEGGTILQIIGRCRANVLISGGTGSGKTTLLNCITNYIDHDERIITCEDAAELQLQQPHVVRLETRPPNIEGEGQITM FT RDLVRNCLRMRPERIIVGEVRGPEAFDLLQAMNTGHDGSMGTLHANNPREALSRCESMITMGGFALPSRTIREMICASID FT IIIQAARLRDGSRRITHITELMGMEGDTIITQDIFVYDLLGEDANGNVIGRHRSTGIGRPRFWERARYYGEEKRLAAALD FT AAEVKVEI*" FT gene complement(338452..339918) FT /locus_tag="Nwi_0298" FT /colour=9 FT CDS complement(340175..341440) FT /locus_tag="Nwi_0299" FT /product="pilus assembly protein cpaE" FT /note="SPTR top hit: 'Q6N3L3 Possible pilus assembly FT protein cpaE. Rhodopseudomonas palustris., evalue=0.0, 82% FT identity hit'" FT /note="KEGG top hit: 'rpa:RPA3680 cpaE category=Genetic FT Information Processing; Folding, Sorting and Degradation; FT Type II secretion system [PATH:rpa03090] , evalue=0.0, FT 82.269504% identity hit'" FT /note="COGs: 'evalue=1e-74 score=273 category=U FT group=COG4963 Flp pilus assembly protein ATPase CpaE'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MISYARNDADSTTSPSPRAEDHIAPAPRVSVQAFCETMETATAVQAASEDRRLAKAHLKIQMGGMTAAVEAYRSAPTPNV FT IILETEGHGDILAALDHLATVCDAGTRVIVIGRVNDVTLYRELVKRGVSDYLMAPAAPIDIVRSVCGLFSTPEAKAVGRI FT IAIAGAKGGVGASTIAHNVAWAIARDLALDSVVADLDLAFGTAGLDFNQDPPQGIADAVFSPDRIDTAFVDRLLSKCTDH FT LSLLAAPATLDRVYDFGTEAFDSTLDTLRATMPCIVLDIPHQWSGWTRRALIGADDILIVATPDLANLRNTKNLFDLLKV FT ARPNDRPPLYCLNQVGVPKRPEISGGEFAKAIESQPVVSIPFDPHMFGSAANNGQMIAEIAPNHRATEMFLQIAQRLTGR FT GEAKKPRKSFLPPFIEKLRAR*" FT gene complement(340175..341440) FT /locus_tag="Nwi_0299" FT /colour=9 FT CDS complement(341437..342177) FT /locus_tag="Nwi_0300" FT /product="pilus assembly protein CpaD" FT /note="SPTR top hit: 'Q6N3L4 Possible pilus assembly FT protein cpaD precursor. Rhodopseudomonas palustris., FT evalue=3e-86, 63% identity hit'" FT /note="KEGG top hit: 'rpa:RPA3679 cpaD category=Genetic FT Information Processing; Folding, Sorting and Degradation; FT Type II secretion system [PATH:rpa03090] , evalue=2e-86, FT 63.008130% identity hit'" FT /note="COGs: 'evalue=1e-36 score=147 category=N FT group=COG5461 Type IV pili component'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MTSADSAARRNLRLAILVAAGLSAALGACTHTARVDTTGSIPDDYRLRHPIAIQEADRTVNIFIGNTRGGLTAPQRADVV FT GLASVWLREGTGAIVAEVPTGTGNARAAADSFREVRSLLAAAGVPPRGIIVRHYHPADPRLFATIRLTYPRIAAVAGPCG FT VWPDDIGPSVKNRGYLDNKPYWNFGCATQRNLASMIDNPSDLVQPRPETPAYTARRTQSFEKYRKGMTTTTDYPEAEKAK FT LSDTGK*" FT gene complement(341437..342177) FT /locus_tag="Nwi_0300" FT /colour=9 FT CDS complement(342198..343679) FT /locus_tag="Nwi_0301" FT /product="type II and III secretion system protein" FT /note="PFAM: Bacterial type II and III secretion system FT protein: (4.1e-55) Transport-associated: (1.3e-12)" FT /note="SPTR top hit: 'Q89UH8 Pilus assembly protein. FT Bradyrhizobium japonicum., evalue=0.0, 71% identity hit'" FT /note="KEGG top hit: 'bja:bll1439 ctpD, cpaC FT category=Genetic Information Processing; Folding, Sorting FT and Degradation; Type II secretion system [PATH:bja03090] FT , evalue=0.0, 71.836735% identity hit'" FT /note="COGs: 'evalue=5e-94 score=338 category=U FT group=COG4964 Flp pilus assembly protein secretin CpaC'" FT /note="InterPro IPR001775:IPR004845:IPR004846:IPR007055" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MEWTTKPTSVRAFVARSLAFAAIGAFTLDAALTPVFASDYRVSGAATAGANMHAQSLSLGIGKSVVVDLPRDVKDVLVAD FT PKIANAVVRSAQRAYIIGAAVGQTNIIFFDSSGQQISAYDIAVTRDLNGLRTALKQLLPNAAIKVDGLGDGVMLSGWVSN FT PIEAQQAGDLAARLTDGAQKVVNNIAVRGRDQVMLKVTVAEVARTVIKQMGIDLSASMNYGTAVVNFTNANPFTALGRPL FT TNNSAAASFGSTMVGGAPVPAVTATLRAMESAGVIRTLAEPNLTAISGESATFISGGEFPIPAGFSCDPATRVCLTQIRF FT KKFGISLNFTPVVLTEGRISLRVMTEVSELSNENSMTLNQSVGNSLTVPSIRTRRAETTLEIPSGGSMAMAGLIHQQTKQ FT VINGLPGIAQVPVLGALFRSRDYVNGQTELMVLVTPYVVRAVAQKDLSRPDDGFADASDPQSDLLGSLNRIYGAPGRVEP FT ARHYRGTYGFITD*" FT gene complement(342198..343679) FT /locus_tag="Nwi_0301" FT /colour=9 FT misc_feature complement(343575..343640) FT /colour=11 FT /locus_tag="Nwi_0301" FT /note="1 probable transmembrane helix predicted FT byTMHMM2.0" FT sig_peptide complement(343587..343679) FT /colour=11 FT /locus_tag="Nwi_0301" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.965) with cleavage site probability FT 0.781 atresidue 31" FT CDS complement(343695..344522) FT /locus_tag="Nwi_0302" FT /product="Flp pilus assembly CpaB" FT /note="PFAM: Flp pilus assembly CpaB: (2.5e-62)" FT /note="SPTR top hit: 'Q89UH7 Pilus assembly protein. FT Bradyrhizobium japonicum., evalue=5e-88, 63% identity FT hit'" FT /note="KEGG top hit: 'bja:bll1440 ctpC, cpaB FT category=Genetic Information Processing; Folding, Sorting FT and Degradation; Type II secretion system [PATH:bja03090] FT , evalue=3e-88, 63.805970% identity hit'" FT /note="COGs: 'evalue=2e-50 score=192 category=U FT group=COG3745 Flp pilus assembly protein CpaB'" FT /note="InterPro IPR010728" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="VTATQAPRRNVDNQRMNTARIVVLTIAVGAGGLAAYLASGSDKETQPVQTEQLRTVDVLVAKSDIPLGQAVTANDVAWQT FT WPADSASHSFIRRDQRPDATTQLAGSIARSPFIAGEPIRELKLVSAKGSGFMAAILPTGMRAISTEISPETGAGGFILPN FT DRVDVILSKREKNADHASGDSVNSETVLGNVRVLAIDQTIEEKNGQKVVVGRTATLELKPEQAETLARSRQMGTLSLALR FT SLADANAPEGDINDRRRDSINVVRYGVPTQTSVQR*" FT gene complement(343695..344522) FT /locus_tag="Nwi_0302" FT /colour=9 FT misc_feature complement(344409..344459) FT /colour=11 FT /locus_tag="Nwi_0302" FT /note="1 probable transmembrane helix predicted FT byTMHMM2.0" FT CDS complement(344602..345126) FT /locus_tag="Nwi_0303" FT /product="peptidase A24A, prepilin type IV" FT /note="PFAM: Peptidase A24A, prepilin type IV: (3.2e-17)" FT /note="SPTR top hit: 'Q6N3L7 Putative type IV prepilin FT peptidase, cpaA precursor. Rhodopseudomonas palustris., FT evalue=2e-70, 73% identity hit'" FT /note="KEGG top hit: 'rpa:RPA3676 EC=3.4.23.43 FT category=Genetic Information Processing; Folding, Sorting FT and Degradation; Type II secretion system [PATH:rpa03090] FT , evalue=1e-70, 73.563218% identity hit'" FT /note="COGs: 'evalue=2e-21 score=95.3 category=U FT group=COG4960 Flp pilus assembly protein protease CpaA'" FT /note="InterPro IPR000045" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MVLDVARLLLFPALMAFAAASDLLTMTISNRVSLLLVAGFLVLAPLSGMGLHEMLSHAGAGLAVLVVAFSCFAMGWVGGG FT DAKVAAAAALWFGFGHTLEYLVYASLFGGALTLLLLQFRQWPLPASLYGQDWLLRLHGKNTGIPYGIALAFAALLIYPET FT DWVRAVDLARFGLN*" FT gene complement(344602..345126) FT /locus_tag="Nwi_0303" FT /colour=9 FT misc_feature complement(join(344653..344703,344764..344826,344887..344952,344965..345030,345046..345111)) FT /colour=11 FT /locus_tag="Nwi_0303" FT /note="5 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(345064..345126) FT /colour=11 FT /locus_tag="Nwi_0303" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.962) with cleavage site probability FT 0.545 atresidue 21" FT CDS complement(345462..345629) FT /locus_tag="Nwi_0304" FT /product="Flp/Fap pilin component" FT /note="PFAM: Flp/Fap pilin component: (5.6e-23)" FT /note="SPTR top hit: 'Q89EE4 Components of type IV pilus FT pilin subunit. Bradyrhizobium japonicum., evalue=6e-15, FT 74% identity hit'" FT /note="KEGG top hit: 'bja:bsl7141 ctpA category=Genetic FT Information Processing; Folding, Sorting and Degradation; FT Type II secretion system [PATH:bja03090] , evalue=3e-15, FT 74.074074% identity hit'" FT /note="COGs: 'evalue=2e-10 score=57 category=U FT group=COG3847 Flp pilus assembly protein pilin Flp'" FT /note="InterPro IPR007047" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=0 FT /translation="MKNLFSRFLKDESGATAIEYGLIAAGIAVAIITAVNTLGTSLNTTFTKVEQDLKK*" FT gene complement(345462..345629) FT /locus_tag="Nwi_0304" FT /colour=0 FT misc_feature complement(345504..345569) FT /colour=11 FT /locus_tag="Nwi_0304" FT /note="1 probable transmembrane helix predicted FT byTMHMM2.0" FT CDS 346034..346525 FT /locus_tag="Nwi_0305" FT /product="conserved hypothetical protein" FT /note="SPTR top hit: 'Q89UH3 Blr1444 protein. FT Bradyrhizobium japonicum., evalue=1e-53, 67% identity FT hit'" FT /note="KEGG top hit: 'bja:blr1444 category=Unassigned, FT evalue=6e-54, 67.721519% identity hit'" FT /note="COGs: 'evalue=2e-07 score=48 category=U FT group=COG4964 Flp pilus assembly protein secretin CpaC'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=13 FT /translation="MWFKFVRGRSRVSVIGVSFAAAILLGAATAPAEVISEPISVNVDQAKLVRLPGPIATIVVGNPLIADVTLQPGGLVVVTG FT KGYGATNMIAMDRAGSIMVDRVIQVEGPSDQVVTVYRGLERESYSCMPICQKRVTLGDSAAYFKATMDQASNLSSQAGGG FT ATR*" FT sig_peptide 346034..346117 FT /colour=11 FT /locus_tag="Nwi_0305" FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.990) with cleavage site probability FT 0.463 atresidue 28" FT gene 346034..346525 FT /locus_tag="Nwi_0305" FT /colour=13 FT misc_feature join(346070..346138,346196..346264) FT /colour=11 FT /locus_tag="Nwi_0305" FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 346707..347267 FT /locus_tag="Nwi_0306" FT /product="Flp pilus assembly protein TadG" FT /note="PFAM: TadE-like: (2.8e-18)" FT /note="SPTR top hit: 'Q6N3L9 Hypothetical protein. FT Rhodopseudomonas palustris., evalue=2e-49, 60% identity FT hit'" FT /note="KEGG top hit: 'rpa:RPA3674 category=Unassigned, FT evalue=1e-49, 60.946746% identity hit'" FT /note="COGs: 'evalue=4e-14 score=71 category=U FT group=COG4961 Flp pilus assembly protein TadG'" FT /note="InterPro IPR012495" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MSSLRRLKATARMAARFPGHKSGSAAVEFALVAPMFFALLFAIIETGLVFFASQSLETALQDSARTIMTGEAQITNLTKQ FT SFKANVVCANVNVLFDCENGIYVDVQSYPSGFGSVTISDPIAGGSFVDNTQYNPGGPGDIVVVRLFYQWPLYVTGLGYNI FT ANLSGSKRLLSATAAFKNEPYPAPSS*" FT gene 346707..347267 FT /locus_tag="Nwi_0306" FT /colour=9 FT misc_feature 346770..346838 FT /colour=11 FT /locus_tag="Nwi_0306" FT /note="1 probable transmembrane helix predicted FT byTMHMM2.0" FT CDS 347295..348023 FT /locus_tag="Nwi_0307" FT /product="Flp pilus assembly protein TadG" FT /note="PFAM: TadE-like: (0.00026)" FT /note="SPTR top hit: 'Q6N3M0 Hypothetical protein. FT Rhodopseudomonas palustris., evalue=3e-45, 50% identity FT hit'" FT /note="KEGG top hit: 'rpa:RPA3673 category=Unassigned, FT evalue=2e-45, 50.000000% identity hit'" FT /note="COGs: 'evalue=3e-08 score=52.4 category=U FT group=COG4961 Flp pilus assembly protein TadG'" FT /note="InterPro IPR012495" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=0 FT /translation="MRIENVKPMWGACLSEVDAGSREESASQRGSGASLAFYRNGNGSGMWSCLKDMASALRRDTRGLAATEFAMIVPLMLVML FT FGTIEVSSGVAVNRKVTLVARTLSDLTSQSKVVNDADVTNFLAASYGIMWPYSSAPVQATISELYIDPATSVARVQWSKG FT KAPRGAGSTVSIPSGLIGRDSSGKVLPNQYLIFSEVSYIYEPVLGYVMSKAGIRLSDTAFTRPRQSACVFFGNPSSIICP FT TT*" FT gene 347295..348023 FT /locus_tag="Nwi_0307" FT /colour=0 FT misc_feature 347499..347567 FT /colour=11 FT /locus_tag="Nwi_0307" FT /note="1 probable transmembrane helix predicted FT byTMHMM2.0" FT CDS complement(348165..349115) FT /locus_tag="Nwi_0308" FT /EC_number="2.7.7.49" FT /product="integrase, catalytic region" FT /note="PFAM: Integrase, catalytic region: (3.9e-38)" FT /note="SPTR top hit: 'Q8KLC4 Hypothetical protein yi08. FT Rhizobium etli., evalue=1e-142, 82% identity hit'" FT /note="KEGG top hit: 'neu:NE2028 category=Unassigned, FT evalue=1e-134, 73.734177% identity hit'" FT /note="COGs: 'evalue=0.008 score=35 category=L FT group=COG2801 Transposase and inactivated derivatives'" FT /note="InterPro IPR001584" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=11 FT /translation="MGQVLHGSATTTEAIRRAIQNSEESLRALSKRYGINQKTVAKWKKRTSVADLPTGPKDPRSTVLSSEEEAIIVAFRKHTL FT LPLDDCLYALQPTIPHLSRSSLHRCLHRHGISRLPEVEGDKPIRKTFRSYPIGYFHIDIAEVQTAEGKLRLFVAIDRTSK FT FAYAELHQEAGKMVAAQFLRNLIVAVPYAIHTVLTDNGIQFTNHARHKYAFHHIFDRVCDENGIEHRLTRINHPWTNGQV FT ERMNRTIKDATVKRFHYDNHDQLRRHLQDFIKAYNFGRRLKTLKGLTPYEFICKRWTSEPDRFIIDPIHQMPGLNT* FT " FT gene complement(348165..349115) FT /locus_tag="Nwi_0308" FT /colour=11 FT CDS 349248..349613 FT /locus_tag="Nwi_0309" FT /product="ISBm1, transposase orfA" FT /note="SPTR top hit: 'Q8CM34 ISBm1, transposase orfA. FT Brucella suis., evalue=4e-48, 73% identity hit'" FT /note="KEGG top hit: 'bms:BR0533 orfA FT category=Unassigned, evalue=1e-48, 73.109244% identity FT hit'" FT /note="COGs: 'evalue=1e-14 score=72.1 category=L FT group=COG3293 Transposase and inactivated derivatives'" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=2 FT /translation="MARFDLTDFEWSVIQPLLPNKSRGVARVDDRRVLNGIFWRLRTGAPWADIPARYGPHTTCVNRFNRWRKAGVWDRILSAV FT SKAYDGDIQMIDSSSIRVHQHAANGQKNRRDPVAWVARAAG*" FT gene 349248..349613 FT /locus_tag="Nwi_0309" FT /colour=2 FT CDS 349385..350017 FT /locus_tag="Nwi_0310" FT /product="transposase, IS4" FT /note="PFAM: Transposase, IS4: (2.7e-15)" FT /note="SPTR top hit: 'Q00430 Ti plasmid DNA insertion FT sequence IS869. Agrobacterium tumefaciens., evalue=7e-48, FT 52% identity hit'" FT /note="KEGG top hit: 'bmb:BruAb1_0557 orfB FT category=Unassigned, evalue=3e-37, 55.970149% identity FT hit'" FT /note="COGs: 'evalue=2e-12 score=65.9 category=L FT group=COG3293 Transposase and inactivated derivatives'" FT /note="InterPro IPR002559" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=2 FT /translation="VGGHSSALRPAHHLREPLQPVAQGRRVGSHSVGCFKGLRWRHPNDRFVVDPRASTCGQRSKKQTRSRCMGRSRGGLTTKI FT HALVDACGLPIVLKITEGQAHDGRSAQDMIDTVERGDVLLADRAYDSNALRQTLAARGARANVKPMPNRVAALQFNRRLY FT RKRNLVERFFNKIKHYRAVATRYDKRDDNFLTSIKLASIRIWLRFNESMT*" FT gene 349385..350017 FT /locus_tag="Nwi_0310" FT /colour=2 FT CDS complement(350232..350438) FT /locus_tag="Nwi_0311" FT /product="Cold-shock protein, DNA-binding" FT /note="PFAM: Cold-shock protein, DNA-binding: (1.3e-29)" FT /note="SMART: Cold shock protein: (1.6e-29)" FT /note="SPTR top hit: 'Q6N3M1 Cold shock DNA binding FT protein. Rhodopseudomonas palustris., evalue=5e-32, 100% FT identity hit'" FT /note="KEGG top hit: 'rpa:RPA3672 cspA5 FT category=Unassigned, evalue=2e-32, 100.000000% identity FT hit'" FT /note="COGs: 'evalue=5e-23 score=99 category=K FT group=COG1278 Cold shock proteins'" FT /note="InterPro IPR002059:IPR011129" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=6 FT /translation="MGTVKWFNATKGYGFIQPDDGGNDVFVHISAVERAGLGTLREGQKISYEIVADRRSGKSSADNLRAAG*" FT gene complement(350232..350438) FT /locus_tag="Nwi_0311" FT /colour=6 FT CDS complement(350696..350977) FT /locus_tag="Nwi_0312" FT /product="translation initiation factor IF-1" FT /note="TIGRFAM: Translation initiation factor IF-1: FT (1.8e-34)" FT /note="PFAM: RNA binding S1: (0.00067)" FT /note="SPTR top hit: 'P61693 Translation initiation factor FT IF-1. Rhodopseudomonas palustris., evalue=2e-45, 96% FT identity hit'" FT /note="KEGG top hit: 'rpa:RPA3671 infA FT category=Unassigned, evalue=9e-46, 96.774194% identity FT hit'" FT /note="COGs: 'evalue=8e-21 score=91 category=J FT group=COG0361 Translation initiation factor 1 (IF-1)'" FT /note="InterPro IPR003029:IPR004368:IPR006196" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=7 FT /translation="MAKEELIQFEGLVTEILPDARYRVQLDAGHEIVAYTAGKMKKNRIKTLAGDRVTIEMSPYDLEKGRLIFRHKDERPGGPPRSGPPRGGQFRRR*" FT gene complement(350696..350977) FT /locus_tag="Nwi_0312" FT /colour=7 FT CDS 351118..351360 FT /locus_tag="Nwi_0313" FT /product="hypothetical protein" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=0 FT /translation="LSGRIFLRRTGIHFAGKRSRGGTHFENALDHDDSGSKRSRRINAIDFDILRSGRRAENRHVLARSGRSSLTLASVGQQSP*" FT gene 351118..351360 FT /locus_tag="Nwi_0313" FT /colour=0 FT CDS complement(351424..352854) FT /locus_tag="Nwi_0314" FT /product="DEAD/DEAH box helicase" FT /note="PFAM: Helicase, C-terminal: (9.5e-34) DEAD/DEAH box FT helicase, N-terminal: (1.7e-66)" FT /note="SMART: Helicase, C-terminal: (2.8e-34) DEAD/DEAH FT box helicase, N-terminal: (1.3e-62)" FT /note="SPTR top hit: 'Q6N3M3 Putative ATP-dependent RNA FT helicase. Rhodopseudomonas palustris., evalue=0.0, 74% FT identity hit'" FT /note="KEGG top hit: 'rpa:RPA3670 category=Unassigned, FT evalue=0.0, 74.633124% identity hit'" FT /note="COGs: 'evalue=1.0e-112 score=399 category=J FT group=COG0513 Superfamily II DNA and RNA helicases'" FT /note="InterPro IPR000629:IPR001410:IPR001650:IPR011545" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=7 FT /translation="MERSNLLSSFQDFGLADPISRALAEENYLTPTPIQAQTIPIALTGRDLVGIAQTGTGKTAAFALPILHRLLQNRIKPQPK FT SCRVLVLSPTRELSGQILENFNAYGRHLRLTSALAIGGVPMGRQVRAVMHGVEVMVATPGRLLDLVQSNGLKLGQVEFLV FT LDEADRMLDMGFIHDIRKVVAKLPAKRQTLFFSATMPKDIAELANQMLRDPARVAVTPVSSTVDRITQRIIQVDHAGKAA FT FLAQLLKQEPVNRALIFTRTKHGADKVVKSLAKSGIRSNAIHGNKSQNHRERVLAEFRAGEIRTLVATDIAARGIDVDGI FT SHVVNFDLPNVPETYVHRIGRTARAGTDGAAISLVAGAEEMAYLRDIEKLIRVVLPREDRRTSGQREAAPAPQQNRGGSP FT APHGHAARAGDASSGKGSRRRRSKKGTPQTSRRPESGRQETSRSAPGSKPGGMQGVAFLHRKSRPARLKSSQPPQR* FT " FT gene complement(351424..352854) FT /locus_tag="Nwi_0314" FT /colour=7 FT CDS complement(353099..353893) FT /locus_tag="Nwi_0315" FT /EC_number="4.2.1.70" FT /product="pseudouridine synthase" FT /note="PFAM: Pseudouridine synthase: (6.7e-40)" FT /note="SPTR top hit: 'Q89X48 Pseudouridine synthase (EC FT 4.2.1.70) (Uracil hydrolyase). Bradyrhizobium japonicum., FT evalue=1e-99, 71% identity hit'" FT /note="KEGG top hit: 'bja:blr0474 category=Unassigned, FT evalue=1e-100, 71.784232% identity hit'" FT /note="COGs: 'evalue=4e-46 score=178 category=J FT group=COG0564 Pseudouridylate synthases 23S RNA-specific' FT " FT /note="InterPro IPR006145:IPR006224" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=7 FT /translation="MPQPEIKRTVDTAQPTPEEIQARVLHRDGLMLVIDKPAGIAVHRGPKGGANLEASFDALRFGLPRPPVLAHRLDRDTSGC FT LVLGRHRKATASLGLLFKHGKISKTYWAVVEGGPSEDEGAIDIPLGRLNEERGWWQKPDPNGLPSTTKWKVLGRSSPDTS FT TVSGAGVQLTWLSLEPLTGRTHQLRVHCAAMGWPIVGDNIYGTQASLRRSRNEQYVPRLDEPGLHLHARQIAIPLSRNKP FT PVVVTAPAPAHLHARLRACGWNAE*" FT gene complement(353099..353893) FT /locus_tag="Nwi_0315" FT /colour=7 FT CDS 353924..354871 FT /locus_tag="Nwi_0316" FT /product="cell division transporter substrate-binding FT protein FtsY" FT /note="TIGRFAM: Cell division transporter FT substrate-binding protein FtsY: (8.3e-127)" FT /note="PFAM: GTP-binding signal recognition particle FT SRP54, G-domain: (1.2e-109) GTP-binding signal recognition FT particle SRP54, G-domain: (0.0059)" FT /note="SMART: ATPase (7.6e-14)" FT /note="SPTR top hit: 'Q89X49 Bll0473 protein. FT Bradyrhizobium japonicum., evalue=1e-148, 86% identity FT hit'" FT /note="KEGG top hit: 'bja:bll0473 category=Genetic FT Information Processing; Folding, Sorting and Degradation; FT Protein export [PATH:bja03060] , evalue=1e-148, 86.942675% FT identity hit'" FT /note="COGs: 'evalue=2e-98 score=352 category=U FT group=COG0552 Signal recognition particle GTPase'" FT /note="InterPro IPR000897:IPR001687:IPR003593:IPR004390" FT /codon_start=1 FT /transl_table=11 FT /evidence=not_experimental FT /colour=9 FT /translation="MSDSSEDQPKQSWWRRLSGGLKRTSASLGTAVADLVTKRKLDRAMLDDIEDVLLRADLGTAVAERIAEAVGEGRYDKAIS FT ADEVKAVVATEVEKVLAPVARPLIIDETVKPFVILVVGVNGSGKTTTIGKLAAKLSAEGRKVMMAAGDTFRAAAIDQLKV FT WGERTGSPVIAGAQGSDSASLAFNALTEARNQNSDVLLIDTAGRLQNKAELMNELEKMVRVIRRVDSSAPHVVLLVLDAT FT VGQNALSQVEAFHRTAGVTGLVMTKLDGTARGGILVALAEKHKLPVHFIGVGEGVDDLAPFTAGDFARAVAGIEH* FT " FT gene 353924..354871 FT /locus_tag="Nwi_0316" FT /colour=9 FT CDS 354979..355584 FT /locus_tag="Nwi_0317" FT /product="Intracellular septation protein A" FT /note="TIGRFAM: Intracellular septation protein A: FT (1.1e-92)" FT /note="PFAM: Intracellular septation protein A: (1.8e-91)" FT /note="SPTR top hit: 'P30961 Probable intracellular FT septation protein. Bradyrhizobium japonicum., FT evalue=2e-93, 83% identity hit'" FT /note="KEGG top hit: 'bja:bll0472 category=Unassigned, FT evalue=1e-93, 83.417085% identity hit'" FT /note="COGs: 'evalue=3e-44 score=171 category=D FT group=COG2917 Intracellular septation protein A'" FT