Cell Motility and Secretion

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
ABC-type uncharacterized transport system involved in gliding motility auxiliary component	N	Contig12	NmulA0583	COG3225	62	1e-10
Chemotaxis protein histidine kinase and related kinase	N	Contig12	NmulA0329	COG0643	40	1e-04
Chemotaxis protein histidine kinase and related kinase	N	Contig12	NmulA0331	COG0643	40	1e-04
Chemotaxis protein histidine kinase and related kinase	N	Contig12	NmulA0333	COG0643	315	9e-87
Chemotaxis protein histidine kinase and related kinase	N	Contig12	NmulA0390	COG0643	46	1e-05
Chemotaxis protein histidine kinase and related kinase	N	Contig12	NmulA0553	COG0643	40	5e-04
Chemotaxis protein histidine kinase and related kinase	N	Contig12	NmulA0707	COG0643	36	0.006
Chemotaxis protein histidine kinase and related kinase	N	Contig12	NmulA0832	COG0643	37	0.002
Chemotaxis protein histidine kinase and related kinase	N	Contig12	NmulA1000	COG0643	41	1e-04
Chemotaxis protein histidine kinase and related kinase	N	Contig12	NmulA1287	COG0643	37	0.004
Chemotaxis protein histidine kinase and related kinase	N	Contig12	NmulA1289	COG0643	47	4e-06
Chemotaxis protein histidine kinase and related kinase	N	Contig12	NmulA1490	COG0643	48	2e-06
Chemotaxis protein histidine kinase and related kinase	N	Contig12	NmulA1492	COG0643	42	1e-04
Chemotaxis protein histidine kinase and related kinase	N	Contig12	NmulA1556	COG0643	41	5e-04
Chemotaxis protein histidine kinase and related kinase	N	Contig12	NmulA2015	COG0643	40	6e-04
Chemotaxis protein histidine kinase and related kinase	N	Contig12	NmulA2207	COG0643	61	3e-10
Chemotaxis protein histidine kinase and related kinase	N	Contig12	NmulA2232	COG0643	39	6e-04
Chemotaxis protein histidine kinase and related kinase	N	Contig12	NmulA2299	COG0643	57	4e-09
Chemotaxis protein histidine kinase and related kinase	N	Contig12	NmulA2410	COG0643	37	0.003
Chemotaxis protein histidine kinase and related kinase	N	Contig12	NmulA2672	COG0643	58	2e-09
Chemotaxis protein histidine kinase and related kinase	N	Contig12	NmulA2694	COG0643	41	6e-04
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA0007	COG2201	46	1e-06
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA0163	COG2201	52	2e-08
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA0333	COG2201	64	3e-11
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA0334	COG2201	300	9e-83
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA0335	COG2201	61	4e-10
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA0389	COG2201	62	9e-11
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA0706	COG2201	48	7e-07
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA0728	COG2201	56	2e-09
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA0826	COG2201	43	4e-06
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA0829	COG2201	42	2e-05
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA1138	COG2201	55	2e-08
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA1161	COG2201	45	2e-05
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA1191	COG2201	47	5e-06
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA1235	COG2201	69	2e-13
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA1279	COG2201	37	9e-04
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA1287	COG2201	76	5e-15
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA1288	COG2201	49	1e-07
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA1336	COG2201	79	2e-16
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA1490	COG2201	44	4e-05
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA1491	COG2201	53	8e-08
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA1492	COG2201	41	2e-04
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA1555	COG2201	59	7e-10
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA1860	COG2201	60	2e-10
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA1861	COG2201	70	2e-13
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA2037	COG2201	35	0.002
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA2207	COG2201	39	0.001
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA2231	COG2201	56	2e-09
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA2297	COG2201	38	0.004
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA2298	COG2201	53	1e-08
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA2385	COG2201	50	9e-08
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA2671	COG2201	55	2e-08
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA2693	COG2201	45	1e-05
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig12	NmulA2694	COG2201	58	4e-09
Chemotaxis signal transduction protein	N	Contig12	NmulA0329	COG0835	94	5e-21
Chemotaxis signal transduction protein	N	Contig12	NmulA0331	COG0835	103	9e-24
Flagellar basal body rod protein	N	Contig12	NmulA1321	COG4786	38	4e-04
Flagellar basal body rod protein	N	Contig12	NmulA1322	COG4787	33	0.008
Flagellar basal body rod protein	N	Contig12	NmulA1322	COG4786	46	1e-06
Flagellar basal body rod protein	N	Contig12	NmulA1324	COG4787	50	2e-07
Flagellar basal body rod protein	N	Contig12	NmulA1324	COG4786	107	2e-24
Flagellar basal body rod protein	N	Contig12	NmulA1325	COG4787	263	1e-71
Flagellar basal body rod protein	N	Contig12	NmulA1325	COG4786	145	3e-36
Flagellar basal body rod protein	N	Contig12	NmulA1326	COG4787	121	6e-29
Flagellar basal body rod protein	N	Contig12	NmulA1326	COG4786	310	6e-86
Flagellar biogenesis protein	N	Contig12	NmulA1354	COG3190	76	1e-15
Flagellar biosynthesis/type III secretory pathway chaperone	N	Contig12	NmulA1316	COG3418	40	6e-05
Flagellar hook-length control protein	N	Contig12	NmulA1350	COG3144	77	2e-15

FLAGELLUM STRUCTURE AND BIOGENESIS

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
flagella assembly protein J	N	Contig12	NmulA1406	COG1955	42	3e-04
Flagellar basal body-associated protein	N	Contig12	NmulA1351	COG1580	100	5e-23
Flagellar basal body L-ring protein	N	Contig12	NmulA1327	COG2063	179	2e-46
Flagellar basal body P-ring biosynthesis protein	N	Contig12	NmulA1318	COG1261	116	2e-27
Flagellar basal-body P-ring protein	N	Contig12	NmulA1328	COG1706	437	1.0e-123
Flagellar basal body protein	N	Contig12	NmulA1321	COG1815	115	1e-27
Flagellar basal body protein	N	Contig12	NmulA1322	COG1815	33	0.008
Flagellar basal body protein	N	Contig12	NmulA1324	COG1815	36	0.004
Flagellar basal body protein	N	Contig12	NmulA1326	COG1815	46	3e-06
Flagellar basal body rod protein	N	Contig12	NmulA1322	COG1558	167	2e-43
Flagellar basal body rod protein	N	Contig12	NmulA1324	COG1558	44	2e-05
Flagellar basal body rod protein	N	Contig12	NmulA1325	COG1558	39	4e-04
Flagellar basal body rod protein	N	Contig12	NmulA1326	COG1558	53	2e-08
Flagellar biosynthesis chaperone	N	Contig12	NmulA1349	COG2882	71	4e-14
Flagellar biosynthesis pathway component FlhA	N	Contig12	NmulA1310	COG1298	850	0.0
Flagellar biosynthesis pathway component FlhB	N	Contig12	NmulA1309	COG1377	397	1.0e-112
Flagellar biosynthesis pathway component FlhB	N	Contig12	NmulA1343	COG1377	79	5e-17
Flagellar biosynthesis pathway component FliP	N	Contig12	NmulA1355	COG1338	287	5e-79
Flagellar biosynthesis pathway component FliQ	N	Contig12	NmulA1356	COG1987	82	5e-18
Flagellar biosynthesis pathway component FliR	N	Contig12	NmulA1357	COG1684	169	2e-43
Flagellar biosynthesis/type III secretory pathway ATPase	N	Contig12	NmulA0308	COG1157	200	2e-52
Flagellar biosynthesis/type III secretory pathway ATPase	N	Contig12	NmulA0310	COG1157	247	9e-67
Flagellar biosynthesis/type III secretory pathway ATPase	N	Contig12	NmulA0951	COG1157	35	0.006
Flagellar biosynthesis/type III secretory pathway ATPase	N	Contig12	NmulA1348	COG1157	588	1.0e-169
Flagellar biosynthesis/type III secretory pathway ATPase	N	Contig12	NmulA1487	COG1157	43	6e-05
Flagellar biosynthesis/type III secretory pathway ATPase	N	Contig12	NmulA1654	COG1157	223	2e-59
Flagellar biosynthesis/type III secretory pathway ATPase	N	Contig12	NmulA1661	COG1157	227	2e-60
Flagellar biosynthesis/type III secretory pathway ATPase	N	Contig12	NmulA2085	COG1157	111	7e-26
Flagellar biosynthesis/type III secretory pathway lipoprotein	N	Contig12	NmulA1345	COG1766	414	1.0e-117
Flagellar biosynthesis/type III secretory pathway protein	N	Contig12	NmulA1347	COG1317	96	2e-21
Flagellar capping protein	N	Contig12	NmulA1339	COG1345	190	3e-49
Flagellar GTP-binding protein	N	Contig12	NmulA1311	COG1419	222	4e-59
Flagellar GTP-binding protein	N	Contig12	NmulA1823	COG1419	39	9e-04
Flagellar GTP-binding protein	N	Contig12	NmulA1903	COG1419	36	0.006
Flagellar GTP-binding protein	N	Contig12	NmulA2134	COG1419	104	2e-23
Flagellar GTP-binding protein	N	Contig12	NmulA2738	COG1419	82	4e-17
Flagellar hook-associated protein	N	Contig12	NmulA1322	COG1256	37	6e-04
Flagellar hook-associated protein	N	Contig12	NmulA1324	COG1256	38	0.001
Flagellar hook-associated protein	N	Contig12	NmulA1326	COG1256	40	1e-04
Flagellar hook-associated protein	N	Contig12	NmulA1330	COG1256	253	2e-68
Flagellar hook-basal body protein	N	Contig12	NmulA1344	COG1677	74	3e-15
Flagellar hook capping protein	N	Contig12	NmulA1323	COG1843	150	8e-38
Flagellar hook protein FlgE	N	Contig12	NmulA1321	COG1749	34	0.003
Flagellar hook protein FlgE	N	Contig12	NmulA1324	COG1749	306	3e-84
Flagellar hook protein FlgE	N	Contig12	NmulA1325	COG1749	69	3e-13
Flagellar hook protein FlgE	N	Contig12	NmulA1326	COG1749	108	4e-25
Flagellar hook protein FlgE	N	Contig12	NmulA1330	COG1749	39	9e-04
Flagellar motor component	N	Contig12	NmulA1029	COG1291	42	4e-05
Flagellar motor component	N	Contig12	NmulA1307	COG1291	243	1e-65
Flagellar motor component	N	Contig12	NmulA1314	COG1291	237	7e-64
Flagellar motor component	N	Contig12	NmulA2300	COG1291	39	2e-04
Flagellar motor component	N	Contig12	NmulA2570	COG1291	42	2e-04
Flagellar motor component	N	Contig12	NmulA2717	COG1291	37	0.001
Flagellar motor protein	N	Contig12	NmulA0749	COG1360	95	5e-21
Flagellar motor protein	N	Contig12	NmulA1308	COG1360	161	7e-41
Flagellar motor protein	N	Contig12	NmulA1315	COG1360	177	9e-46
Flagellar motor protein	N	Contig12	NmulA2188	COG1360	62	5e-11
Flagellar motor protein	N	Contig12	NmulA2713	COG1360	58	3e-10
Flagellar motor switch protein	N	Contig12	NmulA1346	COG1536	276	1e-75
Flagellar motor switch protein	N	Contig12	NmulA1352	COG1868	334	5e-93
Flagellar motor switch protein	N	Contig12	NmulA1353	COG1868	46	1e-06
Flagellar motor switch/type III secretory pathway protein	N	Contig12	NmulA1353	COG1886	97	7e-22
Flagellin and related hook-associated protein	N	Contig12	NmulA1331	COG1344	123	1e-29
Flagellin and related hook-associated protein	N	Contig12	NmulA1337	COG1344	182	3e-47
Flagellin-specific chaperone FliS	N	Contig12	NmulA1340	COG1516	110	7e-26
Muramidase (flagellum-specific)	N	Contig12	NmulA1329	COG1705	149	3e-37
Predicted ATPase involved in biogenesis of flagella	N	Contig12	NmulA0019	COG2874	41	1e-04
Predicted ATPase involved in biogenesis of flagella	N	Contig12	NmulA1803	COG2874	47	3e-06
Uncharacterized flagellar protein FlaG	N	Contig12	NmulA1338	COG1334	51	1e-08

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Flp pilus assembly protein TadC	N	Contig12	NmulA2352	COG2064	83	3e-17
Flp pilus assembly protein TadC	N	Contig12	NmulA2353	COG2064	49	5e-07
Methyl-accepting chemotaxis protein	N	Contig12	NmulA0332	COG0840	118	8e-28
Methyl-accepting chemotaxis protein	N	Contig12	NmulA0390	COG0840	57	6e-09
Methyl-accepting chemotaxis protein	N	Contig12	NmulA0638	COG0840	53	8e-08
Methyl-accepting chemotaxis protein	N	Contig12	NmulA1236	COG0840	47	5e-06
Methyl-accepting chemotaxis protein	N	Contig12	NmulA1289	COG0840	53	6e-08
Methyl-accepting chemotaxis protein	N	Contig12	NmulA1556	COG0840	48	4e-06
Methylase of chemotaxis methyl-accepting protein	N	Contig12	NmulA0330	COG1352	183	2e-47
Negative regulator of flagellin synthesis (anti-sigma28 factor)	N	Contig12	NmulA1317	COG2747	36	0.001
P pilus assembly protein porin PapC	N	Contig11	NmulC2793	COG3188	38	0.003
Protein required for attachment to host cells	N	Contig12	NmulA2124	COG5622	34	0.004
Rod binding protein	N	Contig12	NmulA1329	COG3951	102	3e-23
Tfp pilus assembly protein ATPase PilM	N	Contig12	NmulA0320	COG4972	38	0.001
Tfp pilus assembly protein ATPase PilM	N	Contig12	NmulA2489	COG4972	69	7e-13
Tfp pilus assembly protein ATPase PilU	N	Contig12	NmulA1903	COG5008	105	7e-24
Tfp pilus assembly protein ATPase PilU	N	Contig12	NmulA2354	COG5008	70	4e-13
Tfp pilus assembly protein ATPase PilU	N	Contig12	NmulA2588	COG5008	105	1e-23
Tfp pilus assembly protein FimT	N	Contig12	NmulA1895	COG4970	36	0.002
Tfp pilus assembly protein FimT	N	Contig12	NmulA1896	COG4970	33	0.010
Tfp pilus assembly protein FimT	N	Contig12	NmulA1897	COG4970	43	1e-05
Tfp pilus assembly protein FimT	N	Contig12	NmulA1898	COG4970	45	3e-06
Tfp pilus assembly protein FimT	N	Contig12	NmulA2475	COG4970	35	0.002
Tfp pilus assembly protein FimT	N	Contig12	NmulA2581	COG4970	45	3e-06
Tfp pilus assembly protein FimT	N	Contig12	NmulA2582	COG4970	41	6e-05
Tfp pilus assembly protein FimT	N	Contig12	NmulA2590	COG4970	41	4e-05
Tfp pilus assembly protein FimV	N	Contig12	NmulA1915	COG3170	140	1e-34
Tfp pilus assembly protein major pilin PilA	N	Contig12	NmulA1898	COG4969	40	1e-04
Tfp pilus assembly protein major pilin PilA	N	Contig12	NmulA2475	COG4969	54	6e-09
Tfp pilus assembly protein major pilin PilA	N	Contig12	NmulA2581	COG4969	45	2e-06
Tfp pilus assembly protein major pilin PilA	N	Contig12	NmulA2582	COG4969	44	6e-06
Tfp pilus assembly protein major pilin PilA	N	Contig12	NmulA2590	COG4969	41	3e-05
Tfp pilus assembly protein PilE	N	Contig12	NmulA1895	COG4968	36	0.002
Tfp pilus assembly protein PilE	N	Contig12	NmulA1898	COG4968	55	3e-09
Tfp pilus assembly protein PilE	N	Contig12	NmulA2475	COG4968	48	5e-07
Tfp pilus assembly protein PilE	N	Contig12	NmulA2581	COG4968	58	2e-10
Tfp pilus assembly protein PilE	N	Contig12	NmulA2582	COG4968	50	9e-08
Tfp pilus assembly protein PilE	N	Contig12	NmulA2590	COG4968	50	1e-07
Tfp pilus assembly protein PilF	N	Contig12	NmulA0017	COG3063	46	5e-06
Tfp pilus assembly protein PilF	N	Contig12	NmulA0272	COG3063	42	3e-05
Tfp pilus assembly protein PilF	N	Contig12	NmulA0330	COG3063	43	4e-05
Tfp pilus assembly protein PilF	N	Contig12	NmulA0376	COG3063	70	8e-13
Tfp pilus assembly protein PilF	N	Contig12	NmulA0586	COG3063	45	2e-05
Tfp pilus assembly protein PilF	N	Contig12	NmulA0911	COG3063	78	4e-15
Tfp pilus assembly protein PilF	N	Contig12	NmulA1206	COG3063	44	2e-05
Tfp pilus assembly protein PilF	N	Contig12	NmulA1583	COG3063	37	0.002
Tfp pilus assembly protein PilF	N	Contig12	NmulA1735	COG3063	41	4e-04
Tfp pilus assembly protein PilF	N	Contig12	NmulA1882	COG3063	38	0.001
Tfp pilus assembly protein PilF	N	Contig12	NmulA1975	COG3063	43	2e-05
Tfp pilus assembly protein PilF	N	Contig12	NmulA2351	COG3063	63	5e-11
Tfp pilus assembly protein PilF	N	Contig12	NmulA2583	COG3063	38	0.002
Tfp pilus assembly protein PilF	N	Contig12	NmulA2707	COG3063	51	1e-07
Tfp pilus assembly protein pilus retraction ATPase PilT	N	Contig12	NmulA1903	COG2805	172	4e-44
Tfp pilus assembly protein pilus retraction ATPase PilT	N	Contig12	NmulA2354	COG2805	57	3e-09
Tfp pilus assembly protein pilus retraction ATPase PilT	N	Contig12	NmulA2588	COG2805	160	4e-40
Tfp pilus assembly protein PilV	N	Contig12	NmulA1896	COG4967	41	3e-05
Tfp pilus assembly protein PilV	N	Contig12	NmulA1897	COG4967	36	0.001
Tfp pilus assembly protein PilV	N	Contig12	NmulA1898	COG4967	38	3e-04
Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB	N	Contig12	NmulA1541	COG2804	36	0.008
Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB	N	Contig12	NmulA1903	COG2804	553	1.0e-159
Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB	N	Contig12	NmulA2354	COG2804	72	1e-13
Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB	N	Contig12	NmulA2588	COG2804	478	1.0e-136
Type II secretory pathway component PulD	N	Contig12	NmulA1902	COG1450	307	2e-84
Type II secretory pathway component PulD	N	Contig12	NmulA2360	COG1450	140	2e-34
Type II secretory pathway component PulD	N	Contig12	NmulA2583	COG1450	145	9e-36
Type II secretory pathway component PulF	N	Contig12	NmulA1904	COG1459	332	3e-92
Type II secretory pathway component PulF	N	Contig12	NmulA2589	COG1459	287	7e-79
Type II secretory pathway prepilin signal peptidase PulO and related peptidase	N	Contig12	NmulA2131	COG1989	147	1e-36
Type II secretory pathway prepilin signal peptidase PulO and related peptidase	N	Contig12	NmulA2362	COG1989	40	1e-04
Type II secretory pathway pseudopilin PulG	N	Contig12	NmulA1895	COG2165	38	5e-04
Type II secretory pathway pseudopilin PulG	N	Contig12	NmulA1896	COG2165	48	2e-07
Type II secretory pathway pseudopilin PulG	N	Contig12	NmulA1897	COG2165	43	1e-05
Type II secretory pathway pseudopilin PulG	N	Contig12	NmulA1898	COG2165	94	4e-21
Type II secretory pathway pseudopilin PulG	N	Contig12	NmulA2475	COG2165	49	2e-07
Type II secretory pathway pseudopilin PulG	N	Contig12	NmulA2580	COG2165	49	5e-07
Type II secretory pathway pseudopilin PulG	N	Contig12	NmulA2581	COG2165	57	7e-10
Type II secretory pathway pseudopilin PulG	N	Contig12	NmulA2582	COG2165	62	2e-11
Type II secretory pathway pseudopilin PulG	N	Contig12	NmulA2590	COG2165	89	2e-19
Type IV secretory pathway VirB11 protein involved in flagella biosynthesis	N	Contig12	NmulA1903	COG0630	77	3e-15
Type IV secretory pathway VirB11 protein involved in flagella biosynthesis	N	Contig12	NmulA2354	COG0630	214	1e-56
Type IV secretory pathway VirB11 protein involved in flagella biosynthesis	N	Contig12	NmulA2588	COG0630	95	1e-20

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