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| COG Name | Group | Contig | Gene | COG ID | Score | Evalue |
|---|---|---|---|---|---|---|
| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase | L | Contig12 | NmulA1213 | COG0122 | 116 | 2e-27 |
| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase | L | Contig12 | NmulA2704 | COG0122 | 57 | 1e-09 |
| 3-methyladenine DNA glycosylase | L | Contig12 | NmulA1264 | COG2094 | 213 | 6e-57 |
| 5'-3' exonuclease (including N-terminal domain of PolI) | L | Contig12 | NmulA0568 | COG0258 | 273 | 5e-74 |
| Adenine-specific DNA methylase containing a Zn-ribbon | L | Contig12 | NmulA2226 | COG1743 | 50 | 4e-07 |
| Adenine specific DNA methylase Mod | L | Contig12 | NmulA2179 | COG2189 | 69 | 1e-12 |
| A/G-specific DNA glycosylase | L | Contig12 | NmulA0078 | COG1194 | 360 | 1.0e-100 |
| A/G-specific DNA glycosylase | L | Contig12 | NmulA1007 | COG1194 | 39 | 4e-04 |
| A/G-specific DNA glycosylase | L | Contig12 | NmulA2704 | COG1194 | 101 | 4e-23 |
| ATPase involved in DNA repair | L | Contig12 | NmulA0085 | COG0419 | 38 | 8e-04 |
| ATPase involved in DNA repair | L | Contig12 | NmulA0120 | COG0497 | 37 | 0.002 |
| ATPase involved in DNA repair | L | Contig12 | NmulA0120 | COG0419 | 44 | 2e-05 |
| ATPase involved in DNA repair | L | Contig12 | NmulA0204 | COG0419 | 187 | 3e-48 |
| ATPase involved in DNA repair | L | Contig12 | NmulA0367 | COG0419 | 36 | 0.003 |
| ATPase involved in DNA repair | L | Contig12 | NmulA0503 | COG0419 | 43 | 4e-05 |
| ATPase involved in DNA repair | L | Contig12 | NmulA0645 | COG0497 | 51 | 6e-07 |
| ATPase involved in DNA repair | L | Contig12 | NmulA0645 | COG0419 | 68 | 5e-12 |
| ATPase involved in DNA repair | L | Contig12 | NmulA0730 | COG0419 | 51 | 2e-07 |
| ATPase involved in DNA repair | L | Contig12 | NmulA0883 | COG0419 | 37 | 0.001 |
| ATPase involved in DNA repair | L | Contig12 | NmulA0889 | COG0419 | 45 | 9e-06 |
| ATPase involved in DNA repair | L | Contig12 | NmulA0895 | COG0419 | 50 | 1e-07 |
| ATPase involved in DNA repair | L | Contig12 | NmulA0951 | COG0419 | 51 | 9e-08 |
| ATPase involved in DNA repair | L | Contig12 | NmulA0982 | COG0419 | 40 | 3e-04 |
| ATPase involved in DNA repair | L | Contig12 | NmulA1088 | COG0419 | 38 | 6e-04 |
| ATPase involved in DNA repair | L | Contig12 | NmulA1120 | COG0419 | 38 | 0.001 |
| ATPase involved in DNA repair | L | Contig12 | NmulA1174 | COG0419 | 54 | 4e-08 |
| ATPase involved in DNA repair | L | Contig12 | NmulA1217 | COG0419 | 41 | 8e-05 |
| ATPase involved in DNA repair | L | Contig12 | NmulA1280 | COG0419 | 50 | 5e-07 |
| ATPase involved in DNA repair | L | Contig12 | NmulA1421 | COG0419 | 42 | 1e-04 |
| ATPase involved in DNA repair | L | Contig12 | NmulA1487 | COG0419 | 39 | 0.001 |
| ATPase involved in DNA repair | L | Contig12 | NmulA1504 | COG0419 | 59 | 3e-10 |
| ATPase involved in DNA repair | L | Contig12 | NmulA1611 | COG0419 | 45 | 6e-06 |
| ATPase involved in DNA repair | L | Contig12 | NmulA1702 | COG0419 | 57 | 4e-09 |
| ATPase involved in DNA repair | L | Contig12 | NmulA1740 | COG0497 | 37 | 0.003 |
| ATPase involved in DNA repair | L | Contig12 | NmulA1740 | COG0419 | 48 | 2e-06 |
| ATPase involved in DNA repair | L | Contig12 | NmulA1811 | COG0419 | 42 | 1e-04 |
| ATPase involved in DNA repair | L | Contig12 | NmulA1823 | COG0419 | 37 | 0.004 |
| ATPase involved in DNA repair | L | Contig12 | NmulA1972 | COG0419 | 47 | 1e-06 |
| ATPase involved in DNA repair | L | Contig12 | NmulA1982 | COG0419 | 48 | 7e-07 |
| ATPase involved in DNA repair | L | Contig12 | NmulA2200 | COG0419 | 41 | 2e-04 |
| ATPase involved in DNA repair | L | Contig12 | NmulA2229 | COG0419 | 50 | 8e-07 |
| ATPase involved in DNA repair | L | Contig12 | NmulA2254 | COG0419 | 40 | 7e-04 |
| ATPase involved in DNA repair | L | Contig12 | NmulA2331 | COG0419 | 38 | 0.002 |
| ATPase involved in DNA repair | L | Contig12 | NmulA2421 | COG0497 | 521 | 1.0e-149 |
| ATPase involved in DNA repair | L | Contig12 | NmulA2421 | COG0419 | 51 | 3e-07 |
| ATPase involved in DNA repair | L | Contig12 | NmulA2508 | COG0419 | 40 | 1e-04 |
| ATPase involved in DNA repair | L | Contig12 | NmulA2700 | COG0419 | 44 | 4e-05 |
| ATPase involved in DNA repair | L | Contig12 | NmulA2715 | COG0419 | 47 | 2e-06 |
| ATPase involved in DNA repair | L | Contig12 | NmulA2739 | COG0419 | 47 | 1e-06 |
| ATPase involved in DNA repair | L | Contig12 | NmulA2744 | COG0419 | 35 | 0.008 |
| ATPase involved in DNA repair | L | Contig12 | NmulA2749 | COG0419 | 45 | 6e-06 |
| ATPase related to the helicase subunit of the Holliday junction resolvase | L | Contig12 | NmulA0179 | COG2256 | 552 | 1.0e-158 |
| ATPase related to the helicase subunit of the Holliday junction resolvase | L | Contig12 | NmulA0483 | COG2256 | 52 | 1e-07 |
| ATPase related to the helicase subunit of the Holliday junction resolvase | L | Contig12 | NmulA0684 | COG2256 | 38 | 0.001 |
| ATPase related to the helicase subunit of the Holliday junction resolvase | L | Contig12 | NmulA1541 | COG2256 | 43 | 1e-04 |
| ATPase related to the helicase subunit of the Holliday junction resolvase | L | Contig12 | NmulA1798 | COG2256 | 56 | 9e-09 |
| ATPase related to the helicase subunit of the Holliday junction resolvase | L | Contig12 | NmulA1858 | COG2256 | 98 | 2e-21 |
| ATPase related to the helicase subunit of the Holliday junction resolvase | L | Contig12 | NmulA2097 | COG2256 | 46 | 1e-05 |
| ATPase related to the helicase subunit of the Holliday junction resolvase | L | Contig12 | NmulA2248 | COG2256 | 51 | 2e-07 |
| ATPase related to the helicase subunit of the Holliday junction resolvase | L | Contig12 | NmulA2338 | COG2256 | 47 | 5e-06 |
| ATPase related to the helicase subunit of the Holliday junction resolvase | L | Contig12 | NmulA2339 | COG2256 | 44 | 3e-05 |
| ATPase related to the helicase subunit of the Holliday junction resolvase | L | Contig12 | NmulA2350 | COG2256 | 39 | 7e-04 |
| ATPase related to the helicase subunit of the Holliday junction resolvase | L | Contig12 | NmulA2546 | COG2256 | 37 | 0.003 |
| ATPase related to the helicase subunit of the Holliday junction resolvase | L | Contig12 | NmulA2719 | COG2256 | 85 | 1e-17 |
| ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) | L | Contig12 | NmulA0563 | COG1074 | 183 | 4e-47 |
| ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) | L | Contig12 | NmulA0723 | COG1074 | 289 | 7e-79 |
| ATP-dependent nuclease subunit B | L | Contig12 | NmulA0500 | COG3857 | 37 | 0.002 |
| ATP-dependent nuclease subunit B | L | Contig12 | NmulA0722 | COG3857 | 61 | 4e-10 |
| Bacterial nucleoid DNA-binding protein | L | Contig12 | NmulA0493 | COG0776 | 110 | 2e-26 |
| Bacterial nucleoid DNA-binding protein | L | Contig12 | NmulA2068 | COG0776 | 108 | 8e-26 |
| Bacterial nucleoid DNA-binding protein | L | Contig12 | NmulA2337 | COG0776 | 102 | 6e-24 |
| COG Name | Group | Contig | Gene | COG ID | Score | Evalue |
|---|---|---|---|---|---|---|
| ATPase involved in DNA replication | L | Contig12 | NmulA1386 | COG0470 | 59 | 8e-10 |
| ATPase involved in DNA replication | L | Contig12 | NmulA1858 | COG0470 | 47 | 3e-06 |
| ATPase involved in DNA replication initiation | L | Contig12 | NmulA0001 | COG0593 | 433 | 1.0e-122 |
| ATPase involved in DNA replication initiation | L | Contig12 | NmulA0179 | COG0593 | 46 | 4e-06 |
| ATPase involved in DNA replication initiation | L | Contig12 | NmulA0215 | COG0593 | 40 | 6e-04 |
| ATPase involved in DNA replication initiation | L | Contig12 | NmulA0483 | COG0593 | 43 | 1e-04 |
| ATPase involved in DNA replication initiation | L | Contig12 | NmulA1798 | COG0593 | 38 | 0.003 |
| ATPase involved in DNA replication initiation | L | Contig12 | NmulA1858 | COG0593 | 36 | 0.007 |
| ATPase involved in DNA replication initiation | L | Contig12 | NmulA2616 | COG0593 | 145 | 2e-36 |
| ATPase involved in DNA replication initiation | L | Contig12 | NmulA2719 | COG0593 | 43 | 3e-05 |
| ATP-dependent DNA ligase | L | Contig12 | NmulA1177 | COG1793 | 282 | 7e-77 |
| DNA polymerase elongation subunit (family B) | L | Contig12 | NmulA2217 | COG0417 | 47 | 1e-06 |
| DNA polymerase I - 3'-5' exonuclease and polymerase domains | L | Contig12 | NmulA0568 | COG0749 | 771 | 0.0 |
| DNA primase | L | Contig12 | NmulA2058 | COG0358 | 437 | 1.0e-123 |
| DNA replication protein | L | Contig12 | NmulA0001 | COG1484 | 51 | 2e-07 |
| DNA replication protein | L | Contig12 | NmulA1161 | COG1484 | 35 | 0.009 |
| DNA replication protein | L | Contig12 | NmulA2616 | COG1484 | 34 | 0.009 |
| NAD-dependent DNA ligase (contains BRCT domain type II) | L | Contig12 | NmulA0647 | COG0272 | 889 | 0.0 |
| NAD-dependent DNA ligase (contains BRCT domain type II) | L | Contig12 | NmulA2222 | COG0272 | 34 | 0.002 |
| Primosomal protein N' (replication factor Y) - superfamily II helicase | L | Contig12 | NmulA0639 | COG1198 | 83 | 8e-17 |
| Primosomal protein N' (replication factor Y) - superfamily II helicase | L | Contig12 | NmulA0884 | COG1198 | 53 | 5e-08 |
| Primosomal protein N' (replication factor Y) - superfamily II helicase | L | Contig12 | NmulA1361 | COG1198 | 54 | 4e-08 |
| Primosomal protein N' (replication factor Y) - superfamily II helicase | L | Contig12 | NmulA2327 | COG1198 | 739 | 0.0 |
| Replicative DNA helicase | L | Contig12 | NmulA1803 | COG0305 | 49 | 1e-06 |
| Replicative DNA helicase | L | Contig12 | NmulA1947 | COG0305 | 546 | 1.0e-157 |
| Ribonuclease HI | L | Contig12 | NmulA1619 | COG0328 | 180 | 4e-47 |
| Ribonuclease HII | L | Contig12 | NmulA0668 | COG0164 | 220 | 8e-59 |
| Ribonuclease HIII | L | Contig12 | NmulA0668 | COG1039 | 52 | 4e-08 |
| Single-stranded DNA-binding protein | L | Contig12 | NmulA2227 | COG0629 | 141 | 3e-35 |
| Topoisomerase IA | L | Contig12 | NmulA0396 | COG0550 | 464 | 1.0e-131 |
| Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit | L | Contig12 | NmulA2189 | COG0188 | 1056 | 0.0 |
| Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit | L | Contig12 | NmulA0003 | COG0187 | 865 | 0.0 |
| COG Name | Group | Contig | Gene | COG ID | Score | Evalue |
|---|---|---|---|---|---|---|
| Cdc6-related protein AAA superfamily ATPase | L | Contig12 | NmulA0179 | COG1474 | 41 | 2e-04 |
| Cdc6-related protein AAA superfamily ATPase | L | Contig12 | NmulA0483 | COG1474 | 43 | 9e-05 |
| Cdc6-related protein AAA superfamily ATPase | L | Contig12 | NmulA0684 | COG1474 | 36 | 0.004 |
| Cdc6-related protein AAA superfamily ATPase | L | Contig12 | NmulA1798 | COG1474 | 37 | 0.005 |
| Cdc6-related protein AAA superfamily ATPase | L | Contig12 | NmulA2339 | COG1474 | 35 | 0.008 |
| Cdc6-related protein AAA superfamily ATPase | L | Contig12 | NmulA2350 | COG1474 | 38 | 0.001 |
| Cdc6-related protein AAA superfamily ATPase | L | Contig12 | NmulA2525 | COG1474 | 45 | 8e-06 |
| DNA-damage-inducible protein J | L | Contig12 | NmulA0983 | COG3077 | 46 | 6e-07 |
| DNA-damage-inducible protein J | L | Contig12 | NmulA2034 | COG3077 | 71 | 2e-14 |
| DNA mismatch repair enzyme (predicted ATPase) | L | Contig12 | NmulA1109 | COG0323 | 38 | 0.003 |
| DNA mismatch repair enzyme (predicted ATPase) | L | Contig12 | NmulA1144 | COG0323 | 620 | 1.0e-179 |
| DNA modification methylase | L | Contig12 | NmulA2179 | COG0863 | 60 | 7e-10 |
| DNA or RNA helicase of superfamily II | L | Contig12 | NmulA0639 | COG1061 | 64 | 7e-11 |
| DNA or RNA helicase of superfamily II | L | Contig12 | NmulA0884 | COG1061 | 57 | 3e-09 |
| DNA or RNA helicase of superfamily II | L | Contig12 | NmulA1361 | COG1061 | 60 | 7e-10 |
| DNA or RNA helicase of superfamily II | L | Contig12 | NmulA1799 | COG1061 | 74 | 3e-14 |
| DNA or RNA helicase of superfamily II | L | Contig12 | NmulA2178 | COG1061 | 69 | 1e-12 |
| DNA or RNA helicase of superfamily II | L | Contig12 | NmulA2304 | COG1061 | 77 | 3e-15 |
| DNA or RNA helicase of superfamily II | L | Contig12 | NmulA2327 | COG1061 | 44 | 6e-05 |
| DNA or RNA helicase of superfamily II | L | Contig12 | NmulA2657 | COG1061 | 71 | 2e-13 |
| COG Name | Group | Contig | Gene | COG ID | Score | Evalue |
|---|---|---|---|---|---|---|
| DNA polymerase III alpha subunit | L | Contig12 | NmulA2314 | COG0587 | 55 | 8e-09 |
| DNA polymerase III alpha subunit | L | Contig12 | NmulA2599 | COG0587 | 994 | 0.0 |
| DNA polymerase III alpha subunit | L | Contig12 | NmulA2731 | COG0587 | 1252 | 0.0 |
| DNA polymerase III alpha subunit (gram-positive type) | L | Contig12 | NmulA1618 | COG2176 | 108 | 4e-25 |
| DNA polymerase III alpha subunit (gram-positive type) | L | Contig12 | NmulA2002 | COG2176 | 136 | 4e-33 |
| DNA polymerase III alpha subunit (gram-positive type) | L | Contig12 | NmulA2222 | COG2176 | 35 | 0.001 |
| DNA polymerase III alpha subunit (gram-positive type) | L | Contig12 | NmulA2314 | COG2176 | 51 | 1e-07 |
| DNA polymerase III alpha subunit (gram-positive type) | L | Contig12 | NmulA2599 | COG2176 | 63 | 9e-11 |
| DNA polymerase III alpha subunit (gram-positive type) | L | Contig12 | NmulA2731 | COG2176 | 182 | 1e-46 |
| DNA polymerase III chi subunit | L | Contig12 | NmulA0745 | COG2927 | 113 | 7e-27 |
| DNA polymerase III delta subunit | L | Contig12 | NmulA0513 | COG1466 | 201 | 5e-53 |
| DNA polymerase III epsilon subunit and related 3'-5' exonuclease | L | Contig12 | NmulA0714 | COG0847 | 36 | 0.002 |
| DNA polymerase III epsilon subunit and related 3'-5' exonuclease | L | Contig12 | NmulA1618 | COG0847 | 166 | 2e-42 |
| DNA polymerase III epsilon subunit and related 3'-5' exonuclease | L | Contig12 | NmulA2002 | COG0847 | 134 | 9e-33 |
| DNA polymerase III gamma/tau subunits | L | Contig12 | NmulA0179 | COG2812 | 90 | 3e-19 |
| DNA polymerase III gamma/tau subunits | L | Contig12 | NmulA0215 | COG2812 | 37 | 0.004 |
| DNA polymerase III gamma/tau subunits | L | Contig12 | NmulA1386 | COG2812 | 106 | 3e-24 |
| DNA polymerase III gamma/tau subunits | L | Contig12 | NmulA1858 | COG2812 | 442 | 1.0e-125 |
| DNA polymerase III gamma/tau subunits | L | Contig12 | NmulA2719 | COG2812 | 49 | 4e-07 |
| DNA polymerase sliding clamp subunit (PCNA homolog) | L | Contig12 | NmulA0002 | COG0592 | 312 | 3e-86 |
| COG Name | Group | Contig | Gene | COG ID | Score | Evalue |
|---|---|---|---|---|---|---|
| DNA polymerase IV (family X) | L | Contig12 | NmulA0901 | COG1796 | 301 | 9e-83 |
| DNA repair exonuclease | L | Contig12 | NmulA0203 | COG0420 | 154 | 1e-38 |
| DNA repair exonuclease | L | Contig12 | NmulA1131 | COG0420 | 35 | 0.006 |
| DNA repair photolyase | L | Contig12 | NmulA1617 | COG1533 | 284 | 8e-78 |
| DNA repair photolyase | L | Contig12 | NmulA1979 | COG1533 | 40 | 4e-04 |
| DNA repair protein | L | Contig12 | NmulA2138 | COG2003 | 279 | 1e-76 |
| DNA topoisomerase VI subunit B | L | Contig12 | NmulA1144 | COG1389 | 36 | 0.006 |
| DNA topoisomerase VI subunit B | L | Contig12 | NmulA1490 | COG1389 | 36 | 0.009 |
| DNA topoisomerase VI subunit B | L | Contig12 | NmulA1492 | COG1389 | 37 | 0.005 |
| DNA topoisomerase VI subunit B | L | Contig12 | NmulA2207 | COG1389 | 38 | 0.002 |
| DNA topoisomerase VI subunit B | L | Contig12 | NmulA2410 | COG1389 | 36 | 0.005 |
| DNA uptake protein and related DNA-binding protein | L | Contig12 | NmulA1585 | COG1555 | 56 | 1e-08 |
| DNA uptake protein and related DNA-binding protein | L | Contig12 | NmulA1771 | COG1555 | 66 | 5e-13 |
| DNA uptake protein and related DNA-binding protein | L | Contig12 | NmulA2222 | COG1555 | 84 | 3e-18 |
| ERCC4-like helicase | L | Contig12 | NmulA0639 | COG1111 | 46 | 1e-05 |
| ERCC4-like helicase | L | Contig12 | NmulA0884 | COG1111 | 50 | 6e-07 |
| ERCC4-like helicase | L | Contig12 | NmulA1361 | COG1111 | 52 | 2e-07 |
| ERCC4-like helicase | L | Contig12 | NmulA1799 | COG1111 | 60 | 6e-10 |
| ERCC4-like helicase | L | Contig12 | NmulA2304 | COG1111 | 46 | 8e-06 |
| ERCC4-like helicase | L | Contig12 | NmulA2657 | COG1111 | 74 | 3e-14 |
| ERCC4-type nuclease | L | Contig12 | NmulA0647 | COG1948 | 39 | 0.001 |
| ERCC4-type nuclease | L | Contig12 | NmulA1271 | COG1948 | 46 | 7e-06 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA0085 | COG0178 | 59 | 3e-10 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA0120 | COG0178 | 36 | 0.005 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA0367 | COG0178 | 51 | 7e-08 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA0503 | COG0178 | 54 | 1e-08 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA0682 | COG0178 | 49 | 8e-07 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA0730 | COG0178 | 38 | 9e-04 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA0883 | COG0178 | 39 | 5e-04 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA0889 | COG0178 | 42 | 1e-04 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA0895 | COG0178 | 42 | 4e-05 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA0951 | COG0178 | 45 | 5e-06 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA0982 | COG0178 | 40 | 3e-04 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA1088 | COG0178 | 47 | 1e-06 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA1174 | COG0178 | 51 | 2e-07 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA1217 | COG0178 | 42 | 2e-05 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA1231 | COG0178 | 53 | 2e-08 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA1280 | COG0178 | 47 | 4e-06 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA1421 | COG0178 | 49 | 1e-06 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA1487 | COG0178 | 58 | 2e-09 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA1504 | COG0178 | 47 | 1e-06 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA1611 | COG0178 | 52 | 6e-08 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA1740 | COG0178 | 56 | 7e-09 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA1972 | COG0178 | 47 | 1e-06 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA1982 | COG0178 | 54 | 2e-08 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA2229 | COG0178 | 1538 | 0.0 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA2254 | COG0178 | 52 | 2e-07 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA2331 | COG0178 | 52 | 2e-07 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA2508 | COG0178 | 49 | 4e-07 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA2700 | COG0178 | 40 | 6e-04 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA2739 | COG0178 | 48 | 4e-07 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA2744 | COG0178 | 37 | 0.002 |
| Excinuclease ATPase subunit | L | Contig12 | NmulA2749 | COG0178 | 61 | 1e-10 |
| Exonuclease III | L | Contig12 | NmulA0224 | COG0708 | 279 | 1e-76 |
| Exonuclease III | L | Contig12 | NmulA0606 | COG0708 | 39 | 5e-04 |
| Exonuclease III | L | Contig12 | NmulA1524 | COG0708 | 40 | 1e-04 |
| Exonuclease III | L | Contig12 | NmulA2418 | COG0708 | 319 | 1e-88 |
| Exonuclease VII large subunit | L | Contig12 | NmulA1030 | COG1570 | 467 | 1.0e-133 |
| Exonuclease VII small subunit | L | Contig12 | NmulA0234 | COG1722 | 52 | 7e-09 |
| Factor for inversion stimulation Fis transcriptional activator | L | Contig12 | NmulA0132 | COG2901 | 84 | 2e-18 |
| Factor for inversion stimulation Fis transcriptional activator | L | Contig12 | NmulA2128 | COG2901 | 41 | 1e-04 |
| Formamidopyrimidine-DNA glycosylase | L | Contig12 | NmulA0582 | COG0266 | 331 | 4e-92 |
| Helicase subunit of the DNA excision repair complex | L | Contig12 | NmulA0639 | COG0556 | 71 | 5e-13 |
| Helicase subunit of the DNA excision repair complex | L | Contig12 | NmulA1271 | COG0556 | 44 | 3e-05 |
| Helicase subunit of the DNA excision repair complex | L | Contig12 | NmulA1361 | COG0556 | 1067 | 0.0 |
| Helicase subunit of the DNA excision repair complex | L | Contig12 | NmulA1799 | COG0556 | 45 | 1e-05 |
| Helicase subunit of the DNA excision repair complex | L | Contig12 | NmulA2327 | COG0556 | 48 | 3e-06 |
| Helicase subunit of the DNA excision repair complex | L | Contig12 | NmulA2657 | COG0556 | 39 | 0.001 |
| Holliday junction resolvasome DNA-binding subunit | L | Contig12 | NmulA2720 | COG0632 | 208 | 2e-55 |
| Holliday junction resolvasome endonuclease subunit | L | Contig12 | NmulA2721 | COG0817 | 146 | 5e-37 |
| Holliday junction resolvasome helicase subunit | L | Contig12 | NmulA0001 | COG2255 | 36 | 0.009 |
| Holliday junction resolvasome helicase subunit | L | Contig12 | NmulA0179 | COG2255 | 72 | 7e-14 |
| Holliday junction resolvasome helicase subunit | L | Contig12 | NmulA0483 | COG2255 | 43 | 8e-05 |
| Holliday junction resolvasome helicase subunit | L | Contig12 | NmulA1798 | COG2255 | 48 | 2e-06 |
| Holliday junction resolvasome helicase subunit | L | Contig12 | NmulA1858 | COG2255 | 50 | 4e-07 |
| Holliday junction resolvasome helicase subunit | L | Contig12 | NmulA2097 | COG2255 | 36 | 0.009 |
| Holliday junction resolvasome helicase subunit | L | Contig12 | NmulA2248 | COG2255 | 46 | 8e-06 |
| Holliday junction resolvasome helicase subunit | L | Contig12 | NmulA2338 | COG2255 | 41 | 4e-04 |
| Holliday junction resolvasome helicase subunit | L | Contig12 | NmulA2339 | COG2255 | 42 | 6e-05 |
| Holliday junction resolvasome helicase subunit | L | Contig12 | NmulA2719 | COG2255 | 529 | 1.0e-151 |
| HrpA-like helicase | L | Contig12 | NmulA0884 | COG1643 | 36 | 0.008 |
| HrpA-like helicase | L | Contig12 | NmulA1393 | COG1643 | 671 | 0.0 |
| HrpA-like helicase | L | Contig12 | NmulA1799 | COG1643 | 48 | 2e-06 |
| HrpA-like helicase | L | Contig12 | NmulA2657 | COG1643 | 43 | 7e-05 |
| Inactivated superfamily I helicase | L | Contig12 | NmulA0722 | COG3893 | 52 | 2e-07 |
| Integrase | L | Contig10 | NmulB2807 | COG0582 | 51 | 1e-07 |
| Integrase | L | Contig12 | NmulA0064 | COG0582 | 46 | 3e-06 |
| Integrase | L | Contig12 | NmulA0748 | COG0582 | 67 | 2e-12 |
| Integrase | L | Contig12 | NmulA0922 | COG0582 | 54 | 2e-08 |
| Integrase | L | Contig12 | NmulA2012 | COG0582 | 46 | 5e-06 |
| Integrase | L | Contig12 | NmulA2184 | COG0582 | 57 | 3e-09 |
| Integrase | L | Contig12 | NmulA2544 | COG0582 | 64 | 1e-11 |
| Methylated DNA-protein cysteine methyltransferase | L | Contig12 | NmulA0747 | COG0350 | 114 | 3e-27 |
| Mg-dependent DNase | L | Contig12 | NmulA1381 | COG0084 | 307 | 4e-85 |
| Micrococcal nuclease (thermonuclease) homologs | L | Contig12 | NmulA0156 | COG1525 | 91 | 6e-20 |
| Micrococcal nuclease (thermonuclease) homologs | L | Contig12 | NmulA0952 | COG1525 | 86 | 1e-18 |
| Micrococcal nuclease (thermonuclease) homologs | L | Contig12 | NmulA1302 | COG1525 | 46 | 3e-07 |
| Micrococcal nuclease (thermonuclease) homologs | L | Contig12 | NmulA2003 | COG1525 | 95 | 5e-21 |
| Mismatch repair ATPase (MutS family) | L | Contig12 | NmulA0024 | COG1193 | 45 | 3e-06 |
| Mismatch repair ATPase (MutS family) | L | Contig12 | NmulA0670 | COG1193 | 125 | 2e-29 |
| Mismatch repair ATPase (MutS family) | L | Contig12 | NmulA0670 | COG0249 | 913 | 0.0 |
| Mismatch repair ATPase (MutS family) | L | Contig12 | NmulA2282 | COG1193 | 111 | 1e-25 |
| Mismatch repair ATPase (MutS family) | L | Contig12 | NmulA2282 | COG0249 | 168 | 7e-43 |
| N6-adenine-specific methylase | L | Contig12 | NmulA0392 | COG0742 | 39 | 6e-04 |
| N6-adenine-specific methylase | L | Contig12 | NmulA1854 | COG0742 | 41 | 7e-05 |
| N6-adenine-specific methylase | L | Contig12 | NmulA2216 | COG0742 | 48 | 1e-06 |
| N6-adenine-specific methylase | L | Contig12 | NmulA2640 | COG0742 | 46 | 4e-06 |
| N6-adenine-specific methylase | L | Contig12 | NmulA2735 | COG0742 | 172 | 1e-44 |
| N6-adenine-specific methylase | L | Contig12 | NmulA2751 | COG0742 | 42 | 6e-05 |
| NTP pyrophosphohydrolase containing a Zn-finger probably nucleic-acid-binding | L | Contig12 | NmulA0604 | COG2816 | 39 | 2e-04 |
| NTP pyrophosphohydrolase containing a Zn-finger probably nucleic-acid-binding | L | Contig12 | NmulA1007 | COG2816 | 45 | 7e-06 |
| NTP pyrophosphohydrolase containing a Zn-finger probably nucleic-acid-binding | L | Contig12 | NmulA2233 | COG2816 | 39 | 2e-04 |
| NTP pyrophosphohydrolase containing a Zn-finger probably nucleic-acid-binding | L | Contig12 | NmulA2244 | COG2816 | 41 | 5e-05 |
| NTP pyrophosphohydrolase containing a Zn-finger probably nucleic-acid-binding | L | Contig12 | NmulA2533 | COG2816 | 68 | 4e-13 |
| NTP pyrophosphohydrolase including oxidative damage repair protein | L | Contig12 | NmulA0449 | COG0494 | 54 | 8e-09 |
| NTP pyrophosphohydrolase including oxidative damage repair protein | L | Contig12 | NmulA0604 | COG0494 | 53 | 7e-09 |
| NTP pyrophosphohydrolase including oxidative damage repair protein | L | Contig12 | NmulA1007 | COG0494 | 53 | 3e-08 |
| NTP pyrophosphohydrolase including oxidative damage repair protein | L | Contig12 | NmulA2233 | COG0494 | 50 | 1e-07 |
| NTP pyrophosphohydrolase including oxidative damage repair protein | L | Contig12 | NmulA2244 | COG0494 | 48 | 3e-07 |
| NTP pyrophosphohydrolase including oxidative damage repair protein | L | Contig12 | NmulA2533 | COG0494 | 39 | 2e-04 |
| NTP pyrophosphohydrolase including oxidative damage repair protein | L | Contig12 | NmulA2646 | COG0494 | 40 | 1e-04 |
| Nuclease subunit of the excinuclease complex | L | Contig12 | NmulA0395 | COG0322 | 37 | 0.002 |
| Nuclease subunit of the excinuclease complex | L | Contig12 | NmulA0647 | COG0322 | 38 | 0.003 |
| Nuclease subunit of the excinuclease complex | L | Contig12 | NmulA1271 | COG0322 | 635 | 0.0 |
| Nuclease subunit of the excinuclease complex | L | Contig12 | NmulA1361 | COG0322 | 44 | 4e-05 |
| Nuclease subunit of the excinuclease complex | L | Contig12 | NmulA2002 | COG0322 | 101 | 1e-22 |
| Nucleosome binding factor SPN SPT16 subunit | L | Contig12 | NmulA2632 | COG5406 | 42 | 3e-05 |
| Nucleotidyltransferase/DNA polymerase involved in DNA repair | L | Contig12 | NmulA0949 | COG0389 | 266 | 2e-72 |
| Nucleotidyltransferase/DNA polymerase involved in DNA repair | L | Contig12 | NmulA2598 | COG0389 | 44 | 2e-05 |
| Plasmid replication initiator protein | L | Contig11 | NmulC2789 | COG5534 | 75 | 7e-15 |
| Plasmid replication initiator protein | L | Contig9 | NmulD2817 | COG5534 | 71 | 2e-13 |
| Predicted 3'-5' exonuclease related to the exonuclease domain of PolB | L | Contig12 | NmulA2217 | COG3298 | 76 | 2e-15 |
| Predicted ATPase involved in replication control Cdc46/Mcm family | L | Contig12 | NmulA0106 | COG1241 | 55 | 5e-09 |
| Predicted ATPase involved in replication control Cdc46/Mcm family | L | Contig12 | NmulA0684 | COG1241 | 36 | 0.004 |
| Predicted ATP-dependent endonuclease of the OLD family | L | Contig12 | NmulA0120 | COG3593 | 65 | 9e-12 |
| Predicted ATP-dependent endonuclease of the OLD family | L | Contig12 | NmulA0143 | COG3593 | 63 | 5e-11 |
| Predicted ATP-dependent endonuclease of the OLD family | L | Contig12 | NmulA0645 | COG3593 | 38 | 0.005 |
| Predicted ATP-dependent endonuclease of the OLD family | L | Contig12 | NmulA2421 | COG3593 | 40 | 5e-04 |
| Predicted DNA modification methylase | L | Contig12 | NmulA1032 | COG1041 | 46 | 4e-06 |
| Predicted DNA modification methylase | L | Contig12 | NmulA2216 | COG1041 | 48 | 1e-06 |
| Predicted DNA modification methylase | L | Contig12 | NmulA2226 | COG1041 | 35 | 0.009 |
| Predicted DNA modification methylase | L | Contig12 | NmulA2269 | COG1041 | 37 | 0.002 |
| Predicted DNA modification methylase | L | Contig12 | NmulA2735 | COG1041 | 36 | 0.001 |
| Predicted DNA modification methylase | L | Contig12 | NmulA2751 | COG1041 | 37 | 0.002 |
| Predicted EndoIII-related endonuclease | L | Contig12 | NmulA0078 | COG0177 | 104 | 8e-24 |
| Predicted EndoIII-related endonuclease | L | Contig12 | NmulA1213 | COG0177 | 47 | 2e-06 |
| Predicted EndoIII-related endonuclease | L | Contig12 | NmulA2704 | COG0177 | 300 | 5e-83 |
| Predicted endonuclease distantly related to Holliday junction resolvase | L | Contig12 | NmulA0195 | COG0792 | 113 | 5e-27 |
| Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) | L | Contig12 | NmulA2479 | COG0816 | 137 | 4e-34 |
| Predicted eukaryotic-type DNA primase | L | Contig12 | NmulA1177 | COG3285 | 309 | 4e-85 |
| Predicted methylated DNA-protein cysteine methyltransferase | L | Contig12 | NmulA0747 | COG3695 | 37 | 7e-04 |
| Predicted N6-adenine-specific DNA methylase | L | Contig12 | NmulA1032 | COG0116 | 365 | 1.0e-102 |
| Predicted N6-adenine-specific DNA methylase | L | Contig12 | NmulA1854 | COG0116 | 41 | 2e-04 |
| Predicted N6-adenine-specific DNA methylase | L | Contig12 | NmulA2226 | COG0116 | 38 | 0.002 |
| Predicted NTP pyrophosphohydrolase | L | Contig12 | NmulA0449 | COG4119 | 34 | 0.007 |
| Predicted NTP pyrophosphohydrolase | L | Contig12 | NmulA2233 | COG4119 | 37 | 8e-04 |
| Predicted NTP pyrophosphohydrolase | L | Contig12 | NmulA2646 | COG4119 | 167 | 3e-43 |
| Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake | L | Contig12 | NmulA0395 | COG0758 | 330 | 2e-91 |
| Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake | L | Contig12 | NmulA0567 | COG0758 | 35 | 0.007 |
| Predicted site-specific integrase-resolvase | L | Contig9 | NmulD2813 | COG2452 | 35 | 0.004 |
| Primosomal replication protein N | L | Contig12 | NmulA1950 | COG2965 | 65 | 9e-13 |
| Rad3-related DNA helicase | L | Contig12 | NmulA1412 | COG1199 | 466 | 1.0e-132 |
| Rad3-related DNA helicase | L | Contig12 | NmulA1799 | COG1199 | 43 | 6e-05 |
| Rad3-related DNA helicase | L | Contig12 | NmulA2304 | COG1199 | 37 | 0.003 |
| RecA-family ATPase | L | Contig12 | NmulA1803 | COG3598 | 51 | 1e-07 |
| RecA/RadA recombinase | L | Contig12 | NmulA0019 | COG0468 | 320 | 1e-88 |
| RecA/RadA recombinase | L | Contig12 | NmulA1803 | COG0468 | 63 | 3e-11 |
| RecB family exonuclease | L | Contig12 | NmulA0722 | COG2887 | 50 | 8e-07 |
| RecG-like helicase | L | Contig12 | NmulA0639 | COG1200 | 372 | 1.0e-104 |
| RecG-like helicase | L | Contig12 | NmulA0884 | COG1200 | 805 | 0.0 |
| RecG-like helicase | L | Contig12 | NmulA1361 | COG1200 | 46 | 9e-06 |
| RecG-like helicase | L | Contig12 | NmulA1799 | COG1200 | 51 | 3e-07 |
| RecG-like helicase | L | Contig12 | NmulA2304 | COG1200 | 60 | 4e-10 |
| RecG-like helicase | L | Contig12 | NmulA2327 | COG1200 | 59 | 1e-09 |
| RecG-like helicase | L | Contig12 | NmulA2657 | COG1200 | 39 | 6e-04 |
| RecJ-like exonuclease contains DnaJ-type Zn finger domain | L | Contig12 | NmulA2238 | COG1107 | 46 | 5e-06 |
| Recombinational DNA repair ATPase (RecF pathway) | L | Contig12 | NmulA0120 | COG1195 | 47 | 3e-06 |
| Recombinational DNA repair ATPase (RecF pathway) | L | Contig12 | NmulA0143 | COG1195 | 39 | 7e-04 |
| Recombinational DNA repair ATPase (RecF pathway) | L | Contig12 | NmulA0645 | COG1195 | 42 | 3e-04 |
| Recombinational DNA repair ATPase (RecF pathway) | L | Contig12 | NmulA2421 | COG1195 | 49 | 1e-06 |
| Recombinational DNA repair protein (RecF pathway) | L | Contig12 | NmulA1757 | COG1381 | 160 | 8e-41 |
| Recombinational DNA repair protein (RecF pathway) | L | Contig12 | NmulA1856 | COG0353 | 276 | 7e-76 |
| Retron-type reverse transcriptase | L | Contig12 | NmulA0934 | COG3344 | 47 | 2e-06 |
| Reverse gyrase | L | Contig12 | NmulA0396 | COG1110 | 106 | 7e-24 |
| Reverse gyrase | L | Contig12 | NmulA0639 | COG1110 | 42 | 3e-04 |
| Reverse gyrase | L | Contig12 | NmulA0884 | COG1110 | 37 | 0.005 |
| Reverse gyrase | L | Contig12 | NmulA1361 | COG1110 | 40 | 6e-04 |
| Reverse gyrase | L | Contig12 | NmulA1799 | COG1110 | 41 | 1e-04 |
| Reverse gyrase | L | Contig12 | NmulA2304 | COG1110 | 50 | 6e-07 |
| Reverse gyrase | L | Contig12 | NmulA2657 | COG1110 | 60 | 6e-10 |
| Single-stranded DNA-specific exonuclease | L | Contig12 | NmulA0640 | COG0608 | 375 | 1.0e-105 |
| Single-stranded DNA-specific exonuclease | L | Contig12 | NmulA0913 | COG0608 | 44 | 1e-05 |
| Site-specific DNA methylase | L | Contig12 | NmulA2735 | COG0270 | 37 | 7e-04 |
| Site-specific recombinase DNA invertase Pin homologs | L | Contig11 | NmulC2795 | COG1961 | 45 | 1e-06 |
| Site-specific recombinase DNA invertase Pin homologs | L | Contig12 | NmulA0107 | COG1961 | 67 | 3e-12 |
| Site-specific recombinase DNA invertase Pin homologs | L | Contig12 | NmulA0986 | COG1961 | 71 | 2e-14 |
| Site-specific recombinase DNA invertase Pin homologs | L | Contig12 | NmulA2023 | COG1961 | 50 | 4e-08 |
| Site-specific recombinase DNA invertase Pin homologs | L | Contig9 | NmulD2813 | COG1961 | 130 | 6e-32 |
| Site-specific recombinase XerC | L | Contig10 | NmulB2807 | COG4973 | 118 | 5e-28 |
| Site-specific recombinase XerC | L | Contig12 | NmulA0748 | COG4973 | 229 | 1e-61 |
| Site-specific recombinase XerC | L | Contig12 | NmulA1382 | COG4973 | 51 | 1e-07 |
| Site-specific recombinase XerC | L | Contig12 | NmulA2012 | COG4973 | 120 | 2e-28 |
| Site-specific recombinase XerC | L | Contig12 | NmulA2184 | COG4973 | 40 | 4e-04 |
| Site-specific recombinase XerC | L | Contig12 | NmulA2544 | COG4973 | 328 | 3e-91 |
| Site-specific recombinase XerD | L | Contig10 | NmulB2807 | COG4974 | 150 | 1e-37 |
| Site-specific recombinase XerD | L | Contig12 | NmulA0064 | COG4974 | 46 | 6e-06 |
| Site-specific recombinase XerD | L | Contig12 | NmulA0123 | COG4974 | 43 | 5e-06 |
| Site-specific recombinase XerD | L | Contig12 | NmulA0748 | COG4974 | 383 | 1.0e-107 |
| Site-specific recombinase XerD | L | Contig12 | NmulA0922 | COG4974 | 37 | 0.002 |
| Site-specific recombinase XerD | L | Contig12 | NmulA1382 | COG4974 | 57 | 2e-09 |
| Site-specific recombinase XerD | L | Contig12 | NmulA2012 | COG4974 | 137 | 9e-34 |
| Site-specific recombinase XerD | L | Contig12 | NmulA2184 | COG4974 | 37 | 0.002 |
| Site-specific recombinase XerD | L | Contig12 | NmulA2544 | COG4974 | 271 | 5e-74 |
| Superfamily I DNA and RNA helicase | L | Contig12 | NmulA0563 | COG0210 | 572 | 1.0e-164 |
| Superfamily I DNA and RNA helicase | L | Contig12 | NmulA0723 | COG0210 | 141 | 3e-34 |
| Superfamily II DNA and RNA helicase | L | Contig12 | NmulA0639 | COG0513 | 73 | 9e-14 |
| Superfamily II DNA and RNA helicase | L | Contig12 | NmulA0884 | COG0513 | 64 | 4e-11 |
| Superfamily II DNA and RNA helicase | L | Contig12 | NmulA0924 | COG0513 | 43 | 6e-05 |
| Superfamily II DNA and RNA helicase | L | Contig12 | NmulA1361 | COG0513 | 68 | 2e-12 |
| Superfamily II DNA and RNA helicase | L | Contig12 | NmulA1412 | COG0513 | 36 | 0.007 |
| Superfamily II DNA and RNA helicase | L | Contig12 | NmulA1799 | COG0513 | 426 | 1.0e-120 |
| Superfamily II DNA and RNA helicase | L | Contig12 | NmulA2304 | COG0513 | 123 | 3e-29 |
| Superfamily II DNA and RNA helicase | L | Contig12 | NmulA2327 | COG0513 | 40 | 8e-04 |
| Superfamily II DNA and RNA helicase | L | Contig12 | NmulA2657 | COG0513 | 423 | 1.0e-119 |
| Superfamily II DNA helicase | L | Contig12 | NmulA0639 | COG0514 | 47 | 7e-06 |
| Superfamily II DNA helicase | L | Contig12 | NmulA0884 | COG0514 | 67 | 4e-12 |
| Superfamily II DNA helicase | L | Contig12 | NmulA1361 | COG0514 | 52 | 2e-07 |
| Superfamily II DNA helicase | L | Contig12 | NmulA1799 | COG0514 | 115 | 1e-26 |
| Superfamily II DNA helicase | L | Contig12 | NmulA2304 | COG0514 | 437 | 1.0e-123 |
| Superfamily II DNA helicase | L | Contig12 | NmulA2327 | COG0514 | 42 | 1e-04 |
| Superfamily II DNA helicase | L | Contig12 | NmulA2657 | COG0514 | 104 | 1e-23 |
| Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) | L | Contig12 | NmulA0639 | COG4098 | 70 | 1e-12 |
| Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) | L | Contig12 | NmulA0884 | COG4098 | 52 | 1e-07 |
| Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) | L | Contig12 | NmulA1361 | COG4098 | 55 | 2e-08 |
| Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) | L | Contig12 | NmulA2304 | COG4098 | 38 | 0.002 |
| Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) | L | Contig12 | NmulA2327 | COG4098 | 75 | 2e-14 |
| Superfamily II DNA/RNA helicase SNF2 family | L | Contig12 | NmulA1799 | COG0553 | 52 | 8e-08 |
| Superfamily II DNA/RNA helicase SNF2 family | L | Contig12 | NmulA2657 | COG0553 | 42 | 1e-04 |
| Superfamily II helicase and inactivated derivatives | L | Contig12 | NmulA2180 | COG5519 | 120 | 1e-28 |
| Superfamily II helicase and inactivated derivatives | L | Contig12 | NmulA2181 | COG5519 | 132 | 3e-32 |
| Superfamily II RNA helicase | L | Contig12 | NmulA0639 | COG4581 | 40 | 0.001 |
| Superfamily II RNA helicase | L | Contig12 | NmulA0884 | COG4581 | 42 | 2e-04 |
| Superfamily II RNA helicase | L | Contig12 | NmulA1799 | COG4581 | 41 | 2e-04 |
| Superfamily II RNA helicase | L | Contig12 | NmulA2657 | COG4581 | 36 | 0.008 |
| Topoisomerase IB | L | Contig12 | NmulA0039 | COG3569 | 288 | 6e-79 |
| Transcription-repair coupling factor (superfamily II helicase) | L | Contig12 | NmulA0639 | COG1197 | 1345 | 0.0 |
| Transcription-repair coupling factor (superfamily II helicase) | L | Contig12 | NmulA0884 | COG1197 | 329 | 4e-91 |
| Transcription-repair coupling factor (superfamily II helicase) | L | Contig12 | NmulA1361 | COG1197 | 136 | 4e-33 |
| Transcription-repair coupling factor (superfamily II helicase) | L | Contig12 | NmulA1799 | COG1197 | 40 | 4e-04 |
| Transcription-repair coupling factor (superfamily II helicase) | L | Contig12 | NmulA2304 | COG1197 | 48 | 2e-06 |
| Transcription-repair coupling factor (superfamily II helicase) | L | Contig12 | NmulA2327 | COG1197 | 60 | 6e-10 |
| Transposase and inactivated derivatives | L | Contig11 | NmulC2783 | COG2801 | 60 | 2e-10 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA0046 | COG3293 | 49 | 9e-08 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA0047 | COG3293 | 66 | 1e-12 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA0054 | COG2963 | 46 | 8e-07 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA0055 | COG2801 | 66 | 4e-12 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA0109 | COG2801 | 60 | 2e-10 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA0138 | COG2801 | 71 | 8e-14 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA0168 | COG2801 | 66 | 4e-12 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA0169 | COG2963 | 46 | 1e-06 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA0419 | COG3293 | 50 | 4e-08 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA0420 | COG3293 | 59 | 9e-11 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA0545 | COG2801 | 67 | 1e-12 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA0546 | COG2963 | 39 | 5e-05 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA0597 | COG3293 | 50 | 4e-08 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA0598 | COG3293 | 59 | 9e-11 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA0621 | COG3293 | 66 | 1e-12 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA0623 | COG3293 | 32 | 0.008 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA0830 | COG3293 | 66 | 1e-12 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA0836 | COG3293 | 42 | 7e-06 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA0837 | COG3293 | 59 | 9e-11 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA0838 | COG3293 | 50 | 4e-08 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA1248 | COG2801 | 35 | 0.006 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA1295 | COG2801 | 67 | 2e-12 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA1296 | COG2963 | 39 | 5e-05 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA1298 | COG3293 | 50 | 4e-08 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA1299 | COG3293 | 59 | 9e-11 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA1301 | COG2801 | 71 | 7e-14 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA1319 | COG3293 | 49 | 1e-07 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA1320 | COG3293 | 59 | 9e-11 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA1428 | COG2801 | 35 | 0.006 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA1431 | COG2963 | 39 | 5e-05 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA1432 | COG2801 | 64 | 1e-11 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA1434 | COG2801 | 35 | 0.006 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA1441 | COG2801 | 42 | 7e-06 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA1484 | COG2801 | 71 | 8e-14 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA1525 | COG3293 | 50 | 4e-08 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA1526 | COG3293 | 59 | 9e-11 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA1569 | COG2801 | 43 | 4e-06 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA1642 | COG3293 | 59 | 9e-11 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA1643 | COG3293 | 50 | 4e-08 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA1645 | COG3293 | 50 | 4e-08 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA1646 | COG3293 | 59 | 9e-11 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA1687 | COG3293 | 50 | 4e-08 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA1688 | COG3293 | 59 | 9e-11 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA1693 | COG2801 | 63 | 9e-12 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA1696 | COG2801 | 43 | 4e-06 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA1725 | COG3316 | 37 | 3e-04 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA1735 | COG3464 | 38 | 0.003 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA2009 | COG2801 | 43 | 3e-06 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA2018 | COG3293 | 50 | 7e-08 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA2019 | COG3293 | 66 | 1e-12 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA2021 | COG2801 | 60 | 2e-10 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA2023 | COG3677 | 33 | 0.006 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA2024 | COG2801 | 65 | 5e-12 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA2025 | COG2963 | 45 | 2e-06 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA2027 | COG3293 | 50 | 4e-08 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA2028 | COG3293 | 59 | 9e-11 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA2054 | COG2801 | 42 | 7e-06 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA2096 | COG2801 | 35 | 0.006 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA2098 | COG2801 | 35 | 0.006 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA2173 | COG2963 | 46 | 8e-07 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA2174 | COG2801 | 66 | 4e-12 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA2208 | COG2801 | 35 | 0.006 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA2291 | COG3293 | 44 | 7e-06 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA2347 | COG3293 | 50 | 4e-08 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA2348 | COG3293 | 59 | 9e-11 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA2405 | COG2801 | 70 | 2e-13 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA2406 | COG2963 | 47 | 7e-07 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA2458 | COG3293 | 50 | 4e-08 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA2459 | COG3293 | 59 | 9e-11 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA2606 | COG3293 | 50 | 4e-08 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA2607 | COG3293 | 59 | 9e-11 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA2649 | COG3293 | 50 | 8e-08 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA2650 | COG3293 | 66 | 1e-12 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA2771 | COG3293 | 50 | 4e-08 |
| Transposase and inactivated derivatives | L | Contig12 | NmulA2772 | COG3293 | 41 | 2e-05 |
| Transposase and inactivated derivatives | L | Contig9 | NmulD2821 | COG2801 | 71 | 8e-14 |
| Transposase and inactivated derivatives IS30 family | L | Contig11 | NmulC2783 | COG2826 | 42 | 5e-05 |
| Transposase and inactivated derivatives IS30 family | L | Contig12 | NmulA0109 | COG2826 | 42 | 5e-05 |
| Transposase and inactivated derivatives IS30 family | L | Contig12 | NmulA1692 | COG2826 | 276 | 2e-75 |
| Transposase and inactivated derivatives IS30 family | L | Contig12 | NmulA1836 | COG2826 | 273 | 1e-74 |
| Transposase and inactivated derivatives IS30 family | L | Contig12 | NmulA2021 | COG2826 | 42 | 5e-05 |
| Uncharacterized protein related to Endonuclease III | L | Contig12 | NmulA0078 | COG2231 | 61 | 1e-10 |
| Uncharacterized protein related to Endonuclease III | L | Contig12 | NmulA1213 | COG2231 | 37 | 0.002 |
| Uncharacterized protein related to Endonuclease III | L | Contig12 | NmulA2704 | COG2231 | 90 | 1e-19 |
| Uracil-DNA glycosylase | L | Contig12 | NmulA1269 | COG1573 | 102 | 2e-23 |
| Uracil-DNA glycosylase | L | Contig12 | NmulA1286 | COG1573 | 148 | 3e-37 |
| Uracil-DNA glycosylase | L | Contig12 | NmulA2121 | COG1573 | 165 | 3e-42 |
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