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Translation, Ribosomal Structure and Biogenesis

COG Name Group Contig Gene COG ID Score Evalue
16S RNA G1207 methylase RsmC J Contig12 NmulA0222 COG2813 38 5e-04
16S RNA G1207 methylase RsmC J Contig12 NmulA0911 COG2813 38 0.004
16S RNA G1207 methylase RsmC J Contig12 NmulA1634 COG2813 46 3e-06
16S RNA G1207 methylase RsmC J Contig12 NmulA1854 COG2813 66 2e-12
16S RNA G1207 methylase RsmC J Contig12 NmulA2186 COG2813 38 6e-04
16S RNA G1207 methylase RsmC J Contig12 NmulA2216 COG2813 38 0.001
16S RNA G1207 methylase RsmC J Contig12 NmulA2284 COG2813 41 1e-04
16S RNA G1207 methylase RsmC J Contig12 NmulA2401 COG2813 38 7e-04
16S RNA G1207 methylase RsmC J Contig12 NmulA2548 COG2813 36 0.002
16S RNA G1207 methylase RsmC J Contig12 NmulA2640 COG2813 76 2e-15
16S RNA G1207 methylase RsmC J Contig12 NmulA2735 COG2813 41 4e-05
16S RNA G1207 methylase RsmC J Contig12 NmulA2751 COG2813 51 1e-07
16S RNA G1207 methylase RsmC J Contig12 NmulA2769 COG2813 39 2e-04
16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase J Contig12 NmulA0263 COG1187 195 2e-51
16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase J Contig12 NmulA0791 COG1187 34 0.009
16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase J Contig12 NmulA1065 COG1187 46 5e-06
16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase J Contig12 NmulA1855 COG1187 239 2e-64
16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase J Contig12 NmulA1976 COG1187 60 3e-10
23S rRNA methylase J Contig12 NmulA0482 COG0293 259 1e-70
2'-5' RNA ligase J Contig12 NmulA2125 COG1514 107 7e-25
2-methylthioadenine synthetase J Contig12 NmulA1979 COG0621 454 1.0e-129
2-methylthioadenine synthetase J Contig12 NmulA1987 COG0621 46 3e-06
2-methylthioadenine synthetase J Contig12 NmulA2692 COG0621 552 1.0e-158
Acetyltransferase including N-acetylase of ribosomal protein J Contig12 NmulA1676 COG1670 40 7e-04
Acetyltransferase including N-acetylase of ribosomal protein J Contig12 NmulA1824 COG1670 43 3e-05
Acetyltransferase including N-acetylase of ribosomal protein J Contig12 NmulA2094 COG1670 78 4e-16
Acetyltransferase including N-acetylase of ribosomal protein J Contig12 NmulA2122 COG1670 46 2e-06

AMINOACYL-TRNA SYNTHETASES AND ALTERNATIVE SYSTEMS FOR AMINO ACID ACTIVATION

COG Name Group Contig Gene COG ID Score Evalue
Alanyl-tRNA synthetase J Contig12 NmulA0022 COG0013 1148 0.0
Alanyl-tRNA synthetase J Contig12 NmulA0487 COG0013 59 7e-10
Arginyl-tRNA synthetase J Contig12 NmulA0511 COG0018 46 1e-05
Arginyl-tRNA synthetase J Contig12 NmulA0742 COG0018 41 4e-04
Arginyl-tRNA synthetase J Contig12 NmulA2083 COG0018 36 0.009
Arginyl-tRNA synthetase J Contig12 NmulA2456 COG0018 539 1.0e-154
Aspartyl/asparaginyl-tRNA synthetase J Contig12 NmulA0603 COG0017 183 3e-47
Aspartyl/asparaginyl-tRNA synthetase J Contig12 NmulA2275 COG0017 178 8e-46
Aspartyl-tRNA synthetase J Contig12 NmulA0603 COG0173 919 0.0
Aspartyl-tRNA synthetase J Contig12 NmulA2275 COG0173 109 5e-25
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase J Contig12 NmulA0322 COG0154 506 1.0e-144
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase J Contig12 NmulA0944 COG0154 329 5e-91
Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) J Contig12 NmulA0323 COG0064 699 0.0
Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit J Contig12 NmulA0321 COG0721 81 1e-17
Cysteinyl-tRNA synthetase J Contig12 NmulA0511 COG0215 46 1e-05
Cysteinyl-tRNA synthetase J Contig12 NmulA1881 COG0215 651 0.0
Cysteinyl-tRNA synthetase J Contig12 NmulA1936 COG0215 52 2e-07
Cysteinyl-tRNA synthetase J Contig12 NmulA2654 COG0215 64 5e-11
Glutamyl- and glutaminyl-tRNA synthetase J Contig12 NmulA0797 COG0008 254 5e-69
Glutamyl- and glutaminyl-tRNA synthetase J Contig12 NmulA1604 COG0008 500 1.0e-143
Glutamyl- and glutaminyl-tRNA synthetase J Contig12 NmulA2083 COG0008 356 3e-99
Glycyl-tRNA synthetase alpha subunit J Contig12 NmulA0551 COG0752 521 1.0e-149
Glycyl-tRNA synthetase beta subunit J Contig12 NmulA0550 COG0751 684 0.0
Glycyl-tRNA synthetase (class II) J Contig12 NmulA0450 COG0423 57 3e-09
Glycyl-tRNA synthetase (class II) J Contig12 NmulA0487 COG0423 38 0.002
Histidyl-tRNA synthetase J Contig12 NmulA0442 COG0124 134 1e-32
Histidyl-tRNA synthetase J Contig12 NmulA0450 COG0124 42 1e-04
Histidyl-tRNA synthetase J Contig12 NmulA0487 COG0124 61 3e-10
Histidyl-tRNA synthetase J Contig12 NmulA2376 COG0124 467 1.0e-132
Isoleucyl-tRNA synthetase J Contig12 NmulA0511 COG0060 245 9e-66
Isoleucyl-tRNA synthetase J Contig12 NmulA0742 COG0060 354 1e-98
Isoleucyl-tRNA synthetase J Contig12 NmulA1881 COG0060 43 5e-05
Isoleucyl-tRNA synthetase J Contig12 NmulA1936 COG0060 67 4e-12
Isoleucyl-tRNA synthetase J Contig12 NmulA2654 COG0060 1191 0.0
Leucyl-tRNA synthetase J Contig12 NmulA0511 COG0495 1030 0.0
Leucyl-tRNA synthetase J Contig12 NmulA0742 COG0495 223 5e-59
Leucyl-tRNA synthetase J Contig12 NmulA1881 COG0495 50 4e-07
Leucyl-tRNA synthetase J Contig12 NmulA1936 COG0495 82 1e-16
Leucyl-tRNA synthetase J Contig12 NmulA2654 COG0495 194 3e-50
Lysyl-tRNA synthetase (class I) J Contig12 NmulA1881 COG1384 44 3e-05
Lysyl-tRNA synthetase (class I) J Contig12 NmulA1936 COG1384 41 3e-04
Lysyl-tRNA synthetase (class II) J Contig12 NmulA0603 COG1190 119 7e-28
Lysyl-tRNA synthetase (class II) J Contig12 NmulA2275 COG1190 675 0.0
Phenylalanyl-tRNA synthetase alpha subunit J Contig12 NmulA0491 COG0016 416 1.0e-118
Phenylalanyl-tRNA synthetase alpha subunit J Contig12 NmulA0491 COG2024 53 4e-08
Phenylalanyl-tRNA synthetase beta subunit J Contig12 NmulA0492 COG0072 608 1.0e-175
Prolyl-tRNA synthetase J Contig12 NmulA0180 COG0442 51 1e-07
Prolyl-tRNA synthetase J Contig12 NmulA0450 COG0442 583 1.0e-167
Prolyl-tRNA synthetase J Contig12 NmulA0487 COG0442 105 1e-23
Prolyl-tRNA synthetase J Contig12 NmulA2376 COG0442 36 0.005
Seryl-tRNA synthetase J Contig12 NmulA0180 COG0172 574 1.0e-165
Seryl-tRNA synthetase J Contig12 NmulA0450 COG0172 50 5e-07
Seryl-tRNA synthetase J Contig12 NmulA0487 COG0172 61 2e-10
Threonyl-tRNA synthetase J Contig12 NmulA0180 COG0441 43 4e-05
Threonyl-tRNA synthetase J Contig12 NmulA0450 COG0441 71 2e-13
Threonyl-tRNA synthetase J Contig12 NmulA0487 COG0441 795 0.0
Threonyl-tRNA synthetase J Contig12 NmulA2376 COG0441 42 7e-05
Tryptophanyl-tRNA synthetase J Contig12 NmulA0502 COG0180 68 1e-12
Tryptophanyl-tRNA synthetase J Contig12 NmulA2317 COG0180 307 6e-85
Tyrosyl-tRNA synthetase J Contig12 NmulA0502 COG0162 413 1.0e-116
Valyl-tRNA synthetase J Contig12 NmulA0511 COG0525 287 3e-78
Valyl-tRNA synthetase J Contig12 NmulA0742 COG0525 1189 0.0
Valyl-tRNA synthetase J Contig12 NmulA1881 COG0525 36 0.007
Valyl-tRNA synthetase J Contig12 NmulA1936 COG0525 50 5e-07
Valyl-tRNA synthetase J Contig12 NmulA2654 COG0525 436 1.0e-123
COG Name Group Contig Gene COG ID Score Evalue
Cytosine/adenosine deaminase J Contig12 NmulA0006 COG0590 70 3e-13
Cytosine/adenosine deaminase J Contig12 NmulA0119 COG0590 45 1e-05
Cytosine/adenosine deaminase J Contig12 NmulA0144 COG0590 116 9e-28
Cytosine/adenosine deaminase J Contig12 NmulA1225 COG0590 177 5e-46
Cytotoxic translational repressor of toxin-antitoxin stability system J Contig12 NmulA0326 COG2026 56 3e-10
Dimethyladenosine transferase (rRNA methylation) J Contig11 NmulC2786 COG0030 38 0.002
Dimethyladenosine transferase (rRNA methylation) J Contig12 NmulA0151 COG0030 42 3e-05
Dimethyladenosine transferase (rRNA methylation) J Contig12 NmulA0222 COG0030 35 0.004
Dimethyladenosine transferase (rRNA methylation) J Contig12 NmulA0518 COG0030 301 5e-83
Dimethyladenosine transferase (rRNA methylation) J Contig12 NmulA2186 COG0030 34 0.007
Dimethyladenosine transferase (rRNA methylation) J Contig12 NmulA2216 COG0030 39 7e-04
Dimethyladenosine transferase (rRNA methylation) J Contig12 NmulA2284 COG0030 53 2e-08
Dimethyladenosine transferase (rRNA methylation) J Contig12 NmulA2399 COG0030 51 5e-07
Dimethyladenosine transferase (rRNA methylation) J Contig12 NmulA2640 COG0030 37 0.002
Diphthamide biosynthesis methyltransferase J Contig12 NmulA0196 COG1798 34 0.009
Diphthamide biosynthesis methyltransferase J Contig12 NmulA2313 COG1798 44 3e-05
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) J Contig12 NmulA0217 COG0189 225 4e-60
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) J Contig12 NmulA0479 COG0189 48 4e-06
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) J Contig12 NmulA0943 COG0189 53 9e-08
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) J Contig12 NmulA1722 COG0189 190 2e-49
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) J Contig12 NmulA2250 COG0189 63 7e-11
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) J Contig12 NmulA2251 COG0189 58 2e-09
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) J Contig12 NmulA2491 COG0189 50 2e-07
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) J Contig12 NmulA2752 COG0189 56 7e-09
Glu-tRNAGln amidotransferase subunit E (contains GAD domain) J Contig12 NmulA0323 COG2511 88 1e-18
GTP-binding protein required for 40S ribosome biogenesis J Contig12 NmulA2715 COG5192 39 6e-04
Methionyl-tRNA synthetase J Contig12 NmulA0511 COG0143 117 4e-27
Methionyl-tRNA synthetase J Contig12 NmulA0742 COG0143 88 3e-18
Methionyl-tRNA synthetase J Contig12 NmulA1881 COG0143 51 3e-07
Methionyl-tRNA synthetase J Contig12 NmulA1936 COG0143 590 1.0e-169
Methionyl-tRNA synthetase J Contig12 NmulA2654 COG0143 83 1e-16
Methylase of polypeptide chain release factors J Contig12 NmulA0222 COG2890 37 0.001
Methylase of polypeptide chain release factors J Contig12 NmulA0287 COG2890 42 8e-05
Methylase of polypeptide chain release factors J Contig12 NmulA0392 COG2890 37 0.003
Methylase of polypeptide chain release factors J Contig12 NmulA0911 COG2890 45 2e-05
Methylase of polypeptide chain release factors J Contig12 NmulA1634 COG2890 40 1e-04
Methylase of polypeptide chain release factors J Contig12 NmulA1854 COG2890 200 1e-52
Methylase of polypeptide chain release factors J Contig12 NmulA2186 COG2890 42 3e-05
Methylase of polypeptide chain release factors J Contig12 NmulA2216 COG2890 38 0.002
Methylase of polypeptide chain release factors J Contig12 NmulA2284 COG2890 55 4e-09
Methylase of polypeptide chain release factors J Contig12 NmulA2399 COG2890 37 0.005
Methylase of polypeptide chain release factors J Contig12 NmulA2640 COG2890 239 2e-64
Methylase of polypeptide chain release factors J Contig12 NmulA2735 COG2890 50 7e-08
Methylase of polypeptide chain release factors J Contig12 NmulA2751 COG2890 54 2e-08
Methylase of polypeptide chain release factors J Contig12 NmulA2769 COG2890 38 5e-04
N2 N2-dimethylguanosine tRNA methyltransferase J Contig12 NmulA1854 COG1867 42 6e-05
N2 N2-dimethylguanosine tRNA methyltransferase J Contig12 NmulA2735 COG1867 36 0.001
N2 N2-dimethylguanosine tRNA methyltransferase J Contig12 NmulA2751 COG1867 38 0.001
NAD(FAD)-utilizing enzyme possibly involved in translation J Contig12 NmulA1927 COG1206 39 0.001
NAD(FAD)-utilizing enzyme possibly involved in translation J Contig12 NmulA2770 COG1206 78 1e-15
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) J Contig12 NmulA0127 COG1208 165 3e-42
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) J Contig12 NmulA0261 COG1208 53 5e-08
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) J Contig12 NmulA0266 COG1208 128 5e-31
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) J Contig12 NmulA0284 COG1208 49 3e-07
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) J Contig12 NmulA0312 COG1208 102 5e-23
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) J Contig12 NmulA0401 COG1208 40 3e-04
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) J Contig12 NmulA0425 COG1208 96 2e-21
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) J Contig12 NmulA0648 COG1208 117 8e-28
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) J Contig12 NmulA0680 COG1208 119 3e-28
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) J Contig12 NmulA0718 COG1208 168 6e-43
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) J Contig12 NmulA1396 COG1208 35 0.003
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) J Contig12 NmulA1851 COG1208 46 3e-06
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) J Contig12 NmulA2127 COG1208 44 8e-06
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) J Contig12 NmulA2199 COG1208 41 1e-04
Peptide chain release factor RF-3 J Contig12 NmulA0752 COG4108 73 3e-14
Peptide chain release factor RF-3 J Contig12 NmulA0764 COG4108 231 2e-61
Peptide chain release factor RF-3 J Contig12 NmulA0765 COG4108 73 3e-14
Peptide chain release factor RF-3 J Contig12 NmulA1149 COG4108 62 8e-11
Peptide chain release factor RF-3 J Contig12 NmulA1751 COG4108 112 8e-26
Peptide chain release factor RF-3 J Contig12 NmulA1770 COG4108 106 6e-24
Peptide chain release factor RF-3 J Contig12 NmulA1864 COG4108 51 5e-07
Peptide chain release factor RF-3 J Contig12 NmulA2330 COG4108 760 0.0
Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) J Contig12 NmulA0066 COG1185 43 2e-05
Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) J Contig12 NmulA1064 COG1185 37 0.005
Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) J Contig12 NmulA1585 COG1185 74 5e-14
Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) J Contig12 NmulA1953 COG1185 42 1e-04
Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) J Contig12 NmulA2069 COG1185 71 2e-13
Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) J Contig12 NmulA2553 COG1185 984 0.0
Predicted exonuclease of the beta-lactamase fold involved in RNA processing J Contig12 NmulA1139 COG1236 59 5e-10
Predicted exonuclease of the beta-lactamase fold involved in RNA processing J Contig12 NmulA1662 COG1236 303 1e-83
Predicted GTPase probable translation factor J Contig12 NmulA0446 COG0012 40 2e-04
Predicted GTPase probable translation factor J Contig12 NmulA0592 COG0012 504 1.0e-144
Predicted GTPase probable translation factor J Contig12 NmulA1089 COG0012 35 0.007
Predicted GTPase probable translation factor J Contig12 NmulA1754 COG0012 35 0.007
Predicted GTPase probable translation factor J Contig12 NmulA1817 COG0012 96 3e-21
Predicted GTPase probable translation factor J Contig12 NmulA2373 COG0012 46 5e-06
Predicted GTPase subunit of the pre-mRNA cleavage complex J Contig12 NmulA1088 COG5623 37 0.002
Predicted RNA-binding protein containing KH domain possibly ribosomal protein J Contig12 NmulA0481 COG1534 98 9e-23
Predicted RNA-binding protein (contains PUA domain) J Contig12 NmulA1843 COG2016 36 0.003
Predicted RNA-binding protein J Contig12 NmulA2222 COG1491 32 0.007
Predicted RNA methylase J Contig11 NmulC2786 COG2263 38 0.002
Predicted RNA methylase J Contig12 NmulA0392 COG2263 42 9e-05
Predicted RNA methylase J Contig12 NmulA1854 COG2263 40 2e-04
Predicted RNA methylase J Contig12 NmulA2186 COG2263 42 3e-05
Predicted RNA methylase J Contig12 NmulA2216 COG2263 40 3e-04
Predicted RNA methylase J Contig12 NmulA2640 COG2263 45 5e-06
Predicted RNA methylase J Contig12 NmulA2735 COG2263 46 1e-06
Predicted RNA methylase J Contig12 NmulA2751 COG2263 58 9e-10
Predicted rRNA methylase J Contig12 NmulA0263 COG1189 41 6e-05
Predicted rRNA methylase J Contig12 NmulA0482 COG1189 47 1e-06
Predicted rRNA methylase J Contig12 NmulA0791 COG1189 47 1e-06
Predicted rRNA methylase (SpoU class) J Contig12 NmulA0673 COG0219 54 1e-08
Predicted rRNA methylase (SpoU class) J Contig12 NmulA1127 COG0219 220 4e-59
Predicted rRNA methylase (SpoU class) J Contig12 NmulA1870 COG0219 84 9e-18
Predicted rRNA methylase (SpoU class) J Contig12 NmulA1952 COG0219 47 1e-06
Predicted subunit of tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain J Contig12 NmulA2243 COG2117 35 0.010
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain J Contig12 NmulA0509 COG0482 38 0.001
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain J Contig12 NmulA1043 COG0482 48 9e-07
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain J Contig12 NmulA1199 COG0482 53 6e-08
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain J Contig12 NmulA2243 COG0482 477 1.0e-136
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain J Contig12 NmulA2535 COG0482 36 0.007
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain J Contig12 NmulA2710 COG0482 40 2e-04
Protein required for biogenesis of the 60S ribosomal subunit J Contig12 NmulA2715 COG5163 39 6e-04
Pseudouridine synthase J Contig12 NmulA1862 COG0130 232 3e-62
Pseudouridylate synthase 23S RNA-specific J Contig12 NmulA0263 COG0564 50 2e-07
Pseudouridylate synthase 23S RNA-specific J Contig12 NmulA0791 COG0564 39 3e-04
Pseudouridylate synthase 23S RNA-specific J Contig12 NmulA1065 COG0564 252 3e-68
Pseudouridylate synthase 23S RNA-specific J Contig12 NmulA1855 COG0564 58 1e-09
Pseudouridylate synthase 23S RNA-specific J Contig12 NmulA1976 COG0564 303 2e-83
Pseudouridylate synthase J Contig12 NmulA1914 COG0101 316 2e-87
Putative translation factor (SUA5) J Contig12 NmulA0607 COG0009 228 4e-61
Putative translation factor (SUA5) J Contig12 NmulA1668 COG0009 82 1e-16
Putative translation factor (SUA5) J Contig12 NmulA2315 COG0009 200 4e-53
Putative translation initiation inhibitor yjgF family J Contig12 NmulA0885 COG0251 121 2e-29
Putative translation initiation inhibitor yjgF family J Contig12 NmulA2263 COG0251 92 9e-21
Queuine/archaeosine tRNA-ribosyltransferase J Contig12 NmulA2429 COG0343 532 1.0e-152
Ribonuclease D J Contig12 NmulA0568 COG0349 45 4e-05
Ribonuclease D J Contig12 NmulA1618 COG0349 35 0.005
Ribonuclease G and E J Contig12 NmulA0364 COG1530 480 1.0e-137
Ribonuclease G and E J Contig12 NmulA0541 COG1530 36 0.004
Ribonuclease G and E J Contig12 NmulA1064 COG1530 524 1.0e-150
Ribosomal protein L11 methylase J Contig12 NmulA0151 COG2264 34 0.008
Ribosomal protein L11 methylase J Contig12 NmulA0222 COG2264 39 3e-04
Ribosomal protein L11 methylase J Contig12 NmulA1854 COG2264 49 5e-07
Ribosomal protein L11 methylase J Contig12 NmulA2186 COG2264 53 2e-08
Ribosomal protein L11 methylase J Contig12 NmulA2284 COG2264 37 0.001
Ribosomal protein L11 methylase J Contig12 NmulA2640 COG2264 47 2e-06
Ribosomal protein L11 methylase J Contig12 NmulA2735 COG2264 40 1e-04
Ribosomal protein L11 methylase J Contig12 NmulA2751 COG2264 278 3e-76

RIBOSOMAL PROTEINS - LARGE SUBUNIT

COG Name Group Contig Gene COG ID Score Evalue
Ribosomal protein L10 J Contig12 NmulA0757 COG0244 139 1e-34
Ribosomal protein L11 J Contig12 NmulA0755 COG0080 194 2e-51
Ribosomal protein L13 J Contig12 NmulA0561 COG0102 198 9e-53
Ribosomal protein L14 J Contig12 NmulA0777 COG0093 182 7e-48
Ribosomal protein L15 J Contig12 NmulA0786 COG0200 123 5e-30
Ribosomal protein L16/L10E J Contig12 NmulA0774 COG0197 173 4e-45
Ribosomal protein L17 J Contig12 NmulA0793 COG0203 170 4e-44
Ribosomal protein L18 J Contig12 NmulA0783 COG0256 114 2e-27
Ribosomal protein L19 J Contig12 NmulA0572 COG0335 153 7e-39
Ribosomal protein L1 J Contig12 NmulA0756 COG0081 284 3e-78
Ribosomal protein L20 J Contig12 NmulA0490 COG0292 159 5e-41
Ribosomal protein L21 J Contig12 NmulA1815 COG0261 131 1e-32
Ribosomal protein L22 J Contig12 NmulA0772 COG0091 126 3e-31
Ribosomal protein L23 J Contig12 NmulA0769 COG0089 90 3e-20
Ribosomal protein L24 J Contig12 NmulA0778 COG0198 82 9e-18
Ribosomal protein L25 (general stress protein Ctc) J Contig12 NmulA0590 COG1825 97 1e-21
Ribosomal protein L27 J Contig12 NmulA1816 COG0211 124 9e-31
Ribosomal protein L28 J Contig12 NmulA2139 COG0227 89 7e-20
Ribosomal protein L29 J Contig12 NmulA0775 COG0255 49 5e-08
Ribosomal protein L2 J Contig12 NmulA0770 COG0090 369 1.0e-103
Ribosomal protein L30/L7E J Contig12 NmulA0785 COG1841 62 8e-12
Ribosomal protein L31 J Contig12 NmulA2086 COG0254 93 3e-21
Ribosomal protein L32 J Contig12 NmulA1070 COG0333 60 3e-11
Ribosomal protein L33 J Contig12 NmulA2140 COG0267 50 3e-08
Ribosomal protein L35 J Contig12 NmulA0489 COG0291 61 2e-11
Ribosomal protein L3 J Contig12 NmulA0767 COG0087 263 1e-71
Ribosomal protein L4 J Contig12 NmulA0768 COG0088 200 7e-53
Ribosomal protein L5 J Contig12 NmulA0779 COG0094 270 6e-74
Ribosomal protein L6P/L9E J Contig12 NmulA0782 COG0097 211 3e-56
Ribosomal protein L7/L12 J Contig12 NmulA0758 COG0222 97 3e-22
Ribosomal protein L9 J Contig12 NmulA1948 COG0359 156 8e-40

RIBOSOMAL PROTEINS - SMALL SUBUNIT

COG Name Group Contig Gene COG ID Score Evalue
Predicted RNA binding protein (contains ribosomal protein S1 domain) J Contig12 NmulA0364 COG1098 36 0.007
Predicted RNA binding protein (contains ribosomal protein S1 domain) J Contig12 NmulA1064 COG1098 36 0.009
Predicted RNA binding protein (contains ribosomal protein S1 domain) J Contig12 NmulA1585 COG1098 79 1e-15
Predicted RNA binding protein (contains ribosomal protein S1 domain) J Contig12 NmulA1953 COG1098 40 7e-04
Predicted RNA binding protein (contains ribosomal protein S1 domain) J Contig12 NmulA2069 COG1098 64 3e-11
Predicted RNA binding protein (contains ribosomal protein S1 domain) J Contig12 NmulA2553 COG1098 78 2e-15
Ribosomal protein S10 J Contig12 NmulA0766 COG0051 149 4e-38
Ribosomal protein S11 J Contig12 NmulA0790 COG0100 182 7e-48
Ribosomal protein S12 J Contig12 NmulA0762 COG0048 186 5e-49
Ribosomal protein S13 J Contig12 NmulA0789 COG0099 159 7e-41
Ribosomal protein S14 J Contig12 NmulA0780 COG0199 71 1e-14
Ribosomal protein S15P/S13E J Contig12 NmulA2554 COG0184 110 2e-26
Ribosomal protein S16 J Contig12 NmulA0569 COG0228 108 7e-26
Ribosomal protein S17 J Contig12 NmulA0776 COG0186 98 1e-22
Ribosomal protein S18 J Contig12 NmulA1949 COG0238 85 1e-18
Ribosomal protein S19 J Contig12 NmulA0771 COG0185 144 1e-36
Ribosomal protein S1 J Contig12 NmulA1585 COG0539 91 3e-19
Ribosomal protein S1 J Contig12 NmulA1953 COG0539 43 1e-04
Ribosomal protein S1 J Contig12 NmulA2069 COG0539 588 1.0e-169
Ribosomal protein S1 J Contig12 NmulA2553 COG0539 79 1e-15
Ribosomal protein S20 J Contig12 NmulA1037 COG0268 53 3e-09
Ribosomal protein S21 J Contig12 NmulA2060 COG0828 48 1e-07
Ribosomal protein S2 J Contig12 NmulA0657 COG0052 343 8e-96
Ribosomal protein S3 J Contig12 NmulA0773 COG0092 283 1e-77
Ribosomal protein S3 J Contig12 NmulA1866 COG0092 34 0.005
Ribosomal protein S4 and related protein J Contig12 NmulA0791 COG0522 208 3e-55
Ribosomal protein S5 J Contig12 NmulA0784 COG0098 199 1e-52
Ribosomal protein S6 J Contig12 NmulA1951 COG0360 130 3e-32
Ribosomal protein S7 J Contig12 NmulA0763 COG0049 188 1e-49
Ribosomal protein S8 J Contig12 NmulA0781 COG0096 169 7e-44
Ribosomal protein S9 J Contig12 NmulA0560 COG0103 174 1e-45
COG Name Group Contig Gene COG ID Score Evalue
Ribosome-associated chaperone zuotin J Contig12 NmulA1520 COG5269 38 0.001
Ribosome-associated chaperone zuotin J Contig12 NmulA2238 COG5269 52 9e-08
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) J Contig12 NmulA0791 COG1188 34 0.010
Ribosome-associated protein Y (PSrp-1) J Contig12 NmulA0083 COG1544 91 1e-20
Ribosome-associated protein Y (PSrp-1) J Contig12 NmulA0905 COG1544 48 4e-07
Ribosome-binding factor A J Contig12 NmulA1863 COG0858 120 3e-29
RimM protein required for 16S rRNA processing J Contig12 NmulA0570 COG0806 153 5e-39
RNA-binding protein Rrp4 and related protein (contain S1 domain and KH domain) J Contig12 NmulA1585 COG1097 37 0.006
RNA-binding protein Rrp4 and related protein (contain S1 domain and KH domain) J Contig12 NmulA2069 COG1097 37 0.004
RNA-binding protein Rrp4 and related protein (contain S1 domain and KH domain) J Contig12 NmulA2553 COG1097 36 0.007
RNase PH J Contig12 NmulA0066 COG0689 277 4e-76
RNase PH J Contig12 NmulA2553 COG0689 98 2e-21
RNase PH-related exoribonuclease J Contig12 NmulA0066 COG2123 74 9e-15
RNase PH-related exoribonuclease J Contig12 NmulA2553 COG2123 46 1e-05
RNase P protein component J Contig12 NmulA2778 COG0594 48 2e-07
rRNA methylase J Contig12 NmulA0673 COG0565 247 6e-67
rRNA methylase J Contig12 NmulA0673 COG0566 59 3e-10
rRNA methylase J Contig12 NmulA1127 COG0565 61 4e-11
rRNA methylase J Contig12 NmulA1127 COG0566 73 6e-15
rRNA methylase J Contig12 NmulA1870 COG0565 71 1e-13
rRNA methylase J Contig12 NmulA1870 COG0566 188 5e-49
rRNA methylase J Contig12 NmulA1952 COG0565 43 2e-05
rRNA methylase J Contig12 NmulA1952 COG0566 216 1e-57
S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) J Contig12 NmulA2430 COG0809 483 1.0e-138
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase J Contig12 NmulA0392 COG2265 38 0.001
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase J Contig12 NmulA1854 COG2265 41 1e-04
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase J Contig12 NmulA2186 COG2265 36 0.002
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase J Contig12 NmulA2216 COG2265 347 1e-96
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase J Contig12 NmulA2284 COG2265 56 2e-09
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase J Contig12 NmulA2640 COG2265 65 4e-12
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase J Contig12 NmulA2735 COG2265 54 5e-09
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase J Contig12 NmulA2751 COG2265 49 4e-07
Selenocysteine-specific translation elongation factor J Contig12 NmulA0752 COG3276 185 6e-48
Selenocysteine-specific translation elongation factor J Contig12 NmulA0764 COG3276 49 1e-06
Selenocysteine-specific translation elongation factor J Contig12 NmulA0765 COG3276 185 6e-48
Selenocysteine-specific translation elongation factor J Contig12 NmulA1149 COG3276 127 1e-30
Selenocysteine-specific translation elongation factor J Contig12 NmulA1751 COG3276 78 1e-15
Selenocysteine-specific translation elongation factor J Contig12 NmulA1770 COG3276 73 6e-14
Selenocysteine-specific translation elongation factor J Contig12 NmulA1864 COG3276 94 5e-20
Selenocysteine-specific translation elongation factor J Contig12 NmulA2330 COG3276 56 6e-09
Small protein A (tmRNA-binding) J Contig12 NmulA0476 COG2913 106 2e-24
Superfamily II DNA and RNA helicase J Contig12 NmulA0639 COG0513 73 9e-14
Superfamily II DNA and RNA helicase J Contig12 NmulA0884 COG0513 64 4e-11
Superfamily II DNA and RNA helicase J Contig12 NmulA0924 COG0513 43 6e-05
Superfamily II DNA and RNA helicase J Contig12 NmulA1361 COG0513 68 2e-12
Superfamily II DNA and RNA helicase J Contig12 NmulA1412 COG0513 36 0.007
Superfamily II DNA and RNA helicase J Contig12 NmulA1799 COG0513 426 1.0e-120
Superfamily II DNA and RNA helicase J Contig12 NmulA2304 COG0513 123 3e-29
Superfamily II DNA and RNA helicase J Contig12 NmulA2327 COG0513 40 8e-04
Superfamily II DNA and RNA helicase J Contig12 NmulA2657 COG0513 423 1.0e-119
Translation elongation factor EF-1alpha (GTPase) J Contig12 NmulA0752 COG5256 258 3e-70
Translation elongation factor EF-1alpha (GTPase) J Contig12 NmulA0764 COG5256 67 5e-12
Translation elongation factor EF-1alpha (GTPase) J Contig12 NmulA0765 COG5256 258 3e-70
Translation elongation factor EF-1alpha (GTPase) J Contig12 NmulA1149 COG5256 263 1e-71
Translation elongation factor EF-1alpha (GTPase) J Contig12 NmulA1751 COG5256 107 2e-24
Translation elongation factor EF-1alpha (GTPase) J Contig12 NmulA1770 COG5256 127 2e-30
Translation elongation factor EF-1alpha (GTPase) J Contig12 NmulA1864 COG5256 83 1e-16
Translation elongation factor EF-1alpha (GTPase) J Contig12 NmulA2330 COG5256 69 9e-13
Translation elongation factor EF-1alpha (GTPase) J Contig12 NmulA2373 COG5256 43 6e-05

TRANSLATION FACTORS AND ENZYMES INVOLVED IN TRANSLATION

COG Name Group Contig Gene COG ID Score Evalue
GTPase - translation elongation factors J Contig12 NmulA0752 COG0050 708 0.0
GTPase - translation elongation factors J Contig12 NmulA0764 COG0050 62 2e-10
GTPase - translation elongation factors J Contig12 NmulA0765 COG0050 708 0.0
GTPase - translation elongation factors J Contig12 NmulA1149 COG0050 114 2e-26
GTPase - translation elongation factors J Contig12 NmulA1751 COG0050 95 2e-20
GTPase - translation elongation factors J Contig12 NmulA1770 COG0050 113 3e-26
GTPase - translation elongation factors J Contig12 NmulA1864 COG0050 82 1e-16
GTPase - translation elongation factors J Contig12 NmulA2330 COG0050 58 1e-09
Methionine aminopeptidase J Contig12 NmulA0128 COG0024 104 1e-23
Methionine aminopeptidase J Contig12 NmulA2632 COG0024 341 4e-95
Methionyl-tRNA formyltransferase J Contig12 NmulA0393 COG0223 356 1e-99
Methionyl-tRNA formyltransferase J Contig12 NmulA2618 COG0223 66 3e-12
N-formylmethionyl-tRNA deformylase J Contig12 NmulA0394 COG0242 207 4e-55
N-formylmethionyl-tRNA deformylase J Contig12 NmulA0651 COG0242 175 1e-45
Peptidyl-tRNA hydrolase J Contig12 NmulA0591 COG0193 250 5e-68
Protein chain release factor A J Contig12 NmulA2274 COG0216 280 1e-76
Protein chain release factor A J Contig12 NmulA2409 COG0216 44 5e-06
Protein chain release factor A J Contig12 NmulA2641 COG0216 526 1.0e-150
Protein chain release factor B J Contig12 NmulA2274 COG1186 352 2e-98
Protein chain release factor B J Contig12 NmulA2409 COG1186 102 6e-24
Protein chain release factor B J Contig12 NmulA2641 COG1186 209 2e-55
Ribosome recycling factor J Contig12 NmulA0660 COG0233 236 8e-64
Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) J Contig12 NmulA1268 COG0231 125 2e-30
Translation elongation factors (GTPase) J Contig12 NmulA0752 COG0480 93 4e-20
Translation elongation factors (GTPase) J Contig12 NmulA0764 COG0480 1018 0.0
Translation elongation factors (GTPase) J Contig12 NmulA0765 COG0480 93 4e-20
Translation elongation factors (GTPase) J Contig12 NmulA1149 COG0480 66 5e-12
Translation elongation factors (GTPase) J Contig12 NmulA1751 COG0480 150 2e-37
Translation elongation factors (GTPase) J Contig12 NmulA1770 COG0480 156 3e-39
Translation elongation factors (GTPase) J Contig12 NmulA1864 COG0480 82 2e-16
Translation elongation factors (GTPase) J Contig12 NmulA2330 COG0480 247 1e-66
Translation elongation factor Ts J Contig12 NmulA0658 COG0264 331 3e-92
Translation initiation factor 1 (IF-1) J Contig12 NmulA0788 COG0361 106 2e-25
Translation initiation factor 2 alpha subunit (eIF-2alpha) J Contig12 NmulA1585 COG1093 57 4e-09
Translation initiation factor 2 alpha subunit (eIF-2alpha) J Contig12 NmulA2069 COG1093 66 7e-12
Translation initiation factor 2 alpha subunit (eIF-2alpha) J Contig12 NmulA2553 COG1093 64 4e-11
Translation initiation factor 2 (IF-2; GTPase) J Contig12 NmulA0752 COG0532 83 5e-17
Translation initiation factor 2 (IF-2; GTPase) J Contig12 NmulA0764 COG0532 62 1e-10
Translation initiation factor 2 (IF-2; GTPase) J Contig12 NmulA0765 COG0532 83 5e-17
Translation initiation factor 2 (IF-2; GTPase) J Contig12 NmulA1149 COG0532 54 1e-08
Translation initiation factor 2 (IF-2; GTPase) J Contig12 NmulA1751 COG0532 99 7e-22
Translation initiation factor 2 (IF-2; GTPase) J Contig12 NmulA1754 COG0532 46 4e-06
Translation initiation factor 2 (IF-2; GTPase) J Contig12 NmulA1770 COG0532 73 5e-14
Translation initiation factor 2 (IF-2; GTPase) J Contig12 NmulA1864 COG0532 668 0.0
Translation initiation factor 2 (IF-2; GTPase) J Contig12 NmulA2330 COG0532 67 3e-12
Translation initiation factor 3 (IF-3) J Contig12 NmulA0488 COG0290 215 2e-57
COG Name Group Contig Gene COG ID Score Evalue
Translation initiation factor 2 gamma subunit (eIF-2gamma; GTPase) J Contig12 NmulA0752 COG5257 144 1e-35
Translation initiation factor 2 gamma subunit (eIF-2gamma; GTPase) J Contig12 NmulA0764 COG5257 42 1e-04
Translation initiation factor 2 gamma subunit (eIF-2gamma; GTPase) J Contig12 NmulA0765 COG5257 144 1e-35
Translation initiation factor 2 gamma subunit (eIF-2gamma; GTPase) J Contig12 NmulA1149 COG5257 69 6e-13
Translation initiation factor 2 gamma subunit (eIF-2gamma; GTPase) J Contig12 NmulA1751 COG5257 68 2e-12
Translation initiation factor 2 gamma subunit (eIF-2gamma; GTPase) J Contig12 NmulA1754 COG5257 36 0.004
Translation initiation factor 2 gamma subunit (eIF-2gamma; GTPase) J Contig12 NmulA1770 COG5257 66 6e-12
Translation initiation factor 2 gamma subunit (eIF-2gamma; GTPase) J Contig12 NmulA1864 COG5257 59 2e-09
tRNA(1-methyladenosine) methyltransferase and related methyltransferase J Contig12 NmulA0151 COG2519 51 1e-07
tRNA(1-methyladenosine) methyltransferase and related methyltransferase J Contig12 NmulA0222 COG2519 36 0.002
tRNA(1-methyladenosine) methyltransferase and related methyltransferase J Contig12 NmulA0496 COG2519 41 7e-05
tRNA(1-methyladenosine) methyltransferase and related methyltransferase J Contig12 NmulA0939 COG2519 42 4e-05
tRNA(1-methyladenosine) methyltransferase and related methyltransferase J Contig12 NmulA1854 COG2519 44 1e-05
tRNA(1-methyladenosine) methyltransferase and related methyltransferase J Contig12 NmulA2186 COG2519 44 9e-06
tRNA(1-methyladenosine) methyltransferase and related methyltransferase J Contig12 NmulA2284 COG2519 59 3e-10
tRNA(1-methyladenosine) methyltransferase and related methyltransferase J Contig12 NmulA2620 COG2519 35 0.010
tRNA(1-methyladenosine) methyltransferase and related methyltransferase J Contig12 NmulA2640 COG2519 43 3e-05
tRNA and rRNA cytosine-C5-methylase J Contig12 NmulA0151 COG0144 35 0.005
tRNA and rRNA cytosine-C5-methylase J Contig12 NmulA0392 COG0144 288 8e-79
tRNA and rRNA cytosine-C5-methylase J Contig12 NmulA0482 COG0144 37 0.001
tRNA and rRNA cytosine-C5-methylase J Contig12 NmulA2216 COG0144 40 4e-04
tRNA and rRNA cytosine-C5-methylase J Contig12 NmulA2620 COG0144 269 2e-73
tRNA and rRNA cytosine-C5-methylase J Contig12 NmulA2640 COG0144 38 7e-04
tRNA and rRNA cytosine-C5-methylase J Contig12 NmulA2735 COG0144 38 4e-04
tRNA delta(2)-isopentenylpyrophosphate transferase J Contig12 NmulA0092 COG0324 337 5e-94
tRNA delta(2)-isopentenylpyrophosphate transferase J Contig12 NmulA2339 COG0324 38 0.001
tRNA delta(2)-isopentenylpyrophosphate transferase J Contig12 NmulA2546 COG0324 36 0.006
tRNA-dihydrouridine synthase J Contig12 NmulA0131 COG0042 341 4e-95
tRNA-dihydrouridine synthase J Contig12 NmulA0814 COG0042 37 0.002
tRNA-dihydrouridine synthase J Contig12 NmulA0815 COG0042 42 4e-05
tRNA-dihydrouridine synthase J Contig12 NmulA1200 COG0042 36 0.007
tRNA-dihydrouridine synthase J Contig12 NmulA1804 COG0042 35 0.008
tRNA-(guanine-N1)-methyltransferase J Contig12 NmulA0571 COG0336 341 4e-95
tRNA nucleotidyltransferase/poly(A) polymerase J Contig12 NmulA0882 COG0617 293 1e-80
tRNA nucleotidyltransferase/poly(A) polymerase J Contig12 NmulA2451 COG0617 267 8e-73
Truncated possibly inactive lysyl-tRNA synthetase (class II) J Contig12 NmulA0603 COG2269 56 1e-08
Truncated possibly inactive lysyl-tRNA synthetase (class II) J Contig12 NmulA2275 COG2269 208 9e-55

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