| Kingdom |
Category |
Genus/Species |
Count |
|
|
|
65 |
| Archaea |
|
|
20 |
| |
|
|
65 |
| |
Crenarchaeota |
|
4 |
| |
|
Nitrosopumilus maritimus (nmr) |
3 |
| |
|
Pyrobaculum calidifontis (pcl) |
1 |
| |
Euryarchaeota |
|
16 |
| |
|
Methanosarcina acetivorans (mac) |
7 |
| |
|
Methanoculleus marisnigri (mem) |
1 |
| |
|
Methanospirillum hungatei (mhu) |
1 |
| |
|
Methanosarcina mazei (mma) |
2 |
| |
|
Methanococcus maripaludis C6 (mmx) |
1 |
| |
|
Methanosphaera stadtmanae (mst) |
1 |
| |
|
Methanobacterium thermoautotrophicum (mth) |
1 |
| |
|
Uncultured methanogenic archaeon RC-I (rci) |
2 |
| Bacteria |
|
|
2589 |
| |
Acidobacteria |
|
18 |
| |
|
Acidobacteria bacterium (aba) |
6 |
| |
|
Solibacter usitatus (sus) |
12 |
| |
Actinobacteria |
|
25 |
| |
|
Arthrobacter aurescens (aau) |
2 |
| |
|
Frankia sp. EAN1pec (fre) |
1 |
| |
|
Kineococcus radiotolerans (kra) |
1 |
| |
|
Mycobacterium avium 104 (mav) |
1 |
| |
|
Mycobacterium gilvum (mgi) |
1 |
| |
|
Mycobacterium sp. KMS (mkm) |
2 |
| |
|
Mycobacterium avium paratuberculosis (mpa) |
2 |
| |
|
Mycobacterium vanbaalenii (mva) |
4 |
| |
|
Nocardioides sp. JS614 (nca) |
1 |
| |
|
Nocardia farcinica (nfa) |
1 |
| |
|
Rhodococcus sp. RHA1 (rha) |
1 |
| |
|
Rubrobacter xylanophilus (rxy) |
2 |
| |
|
Streptomyces coelicolor (sco) |
1 |
| |
|
Saccharopolyspora erythraea (sen) |
1 |
| |
|
Streptomyces avermitilis (sma) |
4 |
| |
Bacteroides |
|
9 |
| |
|
Cytophaga hutchinsonii (chu) |
1 |
| |
|
Flavobacterium johnsoniae (fjo) |
3 |
| |
|
Parabacteroides distasonis (pdi) |
1 |
| |
|
Salinibacter ruber (sru) |
4 |
| |
Cyanobacteria |
|
57 |
| |
|
Acaryochloris marina (amr) |
15 |
| |
|
Anabaena sp. PCC7120 (ana) |
9 |
| |
|
Anabaena variabilis (ava) |
10 |
| |
|
Cyanobacteria Yellowstone B-Prime (cyb) |
2 |
| |
|
Gloeobacter violaceus (gvi) |
12 |
| |
|
Prochlorococcus marinus MIT9313 (pmt) |
2 |
| |
|
Synechococcus elongatus PCC6301 (syc) |
1 |
| |
|
Synechococcus sp. CC9902 (sye) |
1 |
| |
|
Synechococcus elongatus PCC7942 (syf) |
2 |
| |
|
Synechocystis sp. PCC6803 (syn) |
1 |
| |
|
Thermosynechococcus elongatus (tel) |
1 |
| |
|
Trichodesmium erythraeum (ter) |
1 |
| |
Deinococcus-Thermus |
|
5 |
| |
|
Deinococcus geothermalis (dge) |
3 |
| |
|
Deinococcus radiodurans (dra) |
1 |
| |
|
Thermus thermophilus HB8 (ttj) |
1 |
| |
Firmicutes |
|
15 |
| |
|
Bacillus clausii (bcl) |
1 |
| |
|
Bacillus cereus subsp. cytotoxis NVH 391-98 (bcy) |
1 |
| |
|
Bacillus halodurans (bha) |
1 |
| |
|
Bacillus subtilis (bsu) |
1 |
| |
|
Bacillus thuringiensis Al Hakam (btl) |
1 |
| |
|
Clostridium thermocellum (cth) |
1 |
| |
|
Lactococcus lactis subsp. lactis IL1403 (lla) |
1 |
| |
|
Moorella thermoacetica (mta) |
1 |
| |
|
Oceanobacillus iheyensis (oih) |
1 |
| |
|
Pelotomaculum thermopropionicum (pth) |
2 |
| |
|
Staphylococcus aureus USA300 TCH1516 (sax) |
1 |
| |
|
Streptococcus sanguinis (ssa) |
1 |
| |
|
Symbiobacterium thermophilum (sth) |
1 |
| |
|
Syntrophomonas wolfei (swo) |
1 |
| |
Green nonsulfur bacteria |
|
12 |
| |
|
Chloroflexus aurantiacus (cau) |
1 |
| |
|
Herpetosiphon aurantiacus (hau) |
6 |
| |
|
Roseiflexus castenholzii DSM13941 (rca) |
4 |
| |
|
Roseiflexus sp. RS-1 (rrs) |
1 |
| |
Green sulfur bacteria |
|
2 |
| |
|
Pelodictyon luteolum (plt) |
1 |
| |
|
Prosthecochloris vibrioformis (pvi) |
1 |
| |
Planctomyces |
|
2 |
| |
|
Rhodopirellula baltica (rba) |
2 |
| |
Proteobacteria |
|
2443 |
| |
|
Acidovorax avenae (aav) |
10 |
| |
|
Alcanivorax borkumensis (abo) |
3 |
| |
|
Acidiphilium cryptum JF-5 (acr) |
3 |
| |
|
Anaeromyxobacter dehalogenans (ade) |
2 |
| |
|
Alkalilimnicola ehrlichei (aeh) |
7 |
| |
|
Anaeromyxobacter sp. Fw109-5 (afw) |
4 |
| |
|
Aeromonas hydrophila (aha) |
1 |
| |
|
Acidovorax sp. JS42 (ajs) |
13 |
| |
|
Aeromonas salmonicida (asa) |
2 |
| |
|
Agrobacterium tumefaciens C58 (Cereon) (atc) |
4 |
| |
|
Azoarcus sp. BH72 (azo) |
52 |
| |
|
Burkholderia cepacia (bam) |
4 |
| |
|
Bdellovibrio bacteriovorus (bba) |
1 |
| |
|
Bartonella bacilliformis (bbk) |
1 |
| |
|
Bordetella bronchiseptica (bbr) |
11 |
| |
|
Bradyrhizobium sp. BTAi1 (bbt) |
4 |
| |
|
Burkholderia cenocepacia HI2424 (bch) |
17 |
| |
|
Burkholderia cenocepacia AU1054 (bcn) |
4 |
| |
|
Brucella canis (bcs) |
1 |
| |
|
Bradyrhizobium japonicum (bja) |
3 |
| |
|
Burkholderia mallei NCTC 10247 (bmn) |
3 |
| |
|
Burkholderia multivorans (bmu) |
4 |
| |
|
Bordetella parapertussis (bpa) |
1 |
| |
|
Burkholderia pseudomallei 668 (bpd) |
4 |
| |
|
Bordetella pertussis (bpe) |
1 |
| |
|
Burkholderia pseudomallei 1710b (bpm) |
2 |
| |
|
Burkholderia pseudomallei K96243 (bps) |
3 |
| |
|
Bordetella petrii (bpt) |
12 |
| |
|
Bradyrhizobium sp. ORS278 (bra) |
2 |
| |
|
Burkholderia thailandensis (bte) |
11 |
| |
|
Burkholderia sp. 383 (bur) |
4 |
| |
|
Burkholderia vietnamiensis (bvi) |
18 |
| |
|
Burkholderia xenovorans (bxe) |
25 |
| |
|
Coxiella burnetii Dugway 7E9-12 (cbd) |
2 |
| |
|
Coxiella burnetii RSA 331 (cbs) |
1 |
| |
|
Caulobacter crescentus (ccr) |
1 |
| |
|
Colwellia psychrerythraea (cps) |
2 |
| |
|
Chromohalobacter salexigens (csa) |
1 |
| |
|
Chromobacterium violaceum (cvi) |
24 |
| |
|
Delftia acidovorans (dac) |
15 |
| |
|
Dechloromonas aromatica (dar) |
59 |
| |
|
Desulfovibrio desulfuricans (dde) |
1 |
| |
|
Candidatus Desulfococcus oleovorans (dol) |
5 |
| |
|
Desulfotalea psychrophila (dps) |
3 |
| |
|
Dinoroseobacter shibae (dsh) |
3 |
| |
|
Desulfovibrio vulgaris DP4 (dvl) |
2 |
| |
|
Desulfovibrio vulgaris Hildenborough (dvu) |
12 |
| |
|
Azoarcus sp. EbN1 (eba) |
53 |
| |
|
Erwinia carotovora (eca) |
2 |
| |
|
Escherichia coli O157 Sakai (EHEC) (ecs) |
2 |
| |
|
Enterobacter sakazakii (esa) |
1 |
| |
|
Gluconacetobacter diazotrophicus (gdi) |
1 |
| |
|
Geobacter metallireducens (gme) |
9 |
| |
|
Gluconobacter oxydans (gox) |
15 |
| |
|
Geobacter sulfurreducens (gsu) |
4 |
| |
|
Geobacter uraniumreducens (gur) |
10 |
| |
|
Herminiimonas arsenicoxydans (har) |
30 |
| |
|
Hahella chejuensis (hch) |
10 |
| |
|
Hyphomonas neptunium (hne) |
1 |
| |
|
Idiomarina loihiensis (ilo) |
7 |
| |
|
Legionella pneumophila Corby (lpc) |
3 |
| |
|
Legionella pneumophila Lens (lpf) |
3 |
| |
|
Legionella pneumophila Paris (lpp) |
1 |
| |
|
Magnetospirillum magneticum (mag) |
3 |
| |
|
Marinobacter aquaeolei (maq) |
5 |
| |
|
Methylococcus capsulatus (mca) |
27 |
| |
|
Mesorhizobium sp. BNC1 (mes) |
2 |
| |
|
Methylobacterium extorquens (mex) |
3 |
| |
|
Methylobacillus flagellatus (mfa) |
87 |
| |
|
Magnetococcus sp. MC-1 (mgm) |
1 |
| |
|
Mesorhizobium loti (mlo) |
4 |
| |
|
Maricaulis maris (mmr) |
2 |
| |
|
Minibacterium massiliensis (mms) |
37 |
| |
|
Marinomonas sp. MWYL1 (mmw) |
2 |
| |
|
Methylibium petroleiphilum (mpt) |
11 |
| |
|
Myxococcus xanthus (mxa) |
5 |
| |
|
Novosphingobium aromaticivorans (nar) |
1 |
| |
|
Nitrosomonas eutropha (net) |
408 |
| |
|
Nitrosomonas europaea (neu) |
747 |
| |
|
Neisseria gonorrhoeae (ngo) |
2 |
| |
|
Nitrobacter hamburgensis (nha) |
24 |
| |
|
Neisseria meningitidis 053442 (nmn) |
1 |
| |
|
Nitrosococcus oceani (noc) |
60 |
| |
|
Nitrobacter winogradskyi (nwi) |
5 |
| |
|
Ochrobactrum anthropi (oan) |
4 |
| |
|
Pseudomonas aeruginosa PAO1 (pae) |
4 |
| |
|
Pseudomonas aeruginosa PA7 (pap) |
9 |
| |
|
Psychrobacter arcticum (par) |
3 |
| |
|
Pseudoalteromonas atlantica (pat) |
2 |
| |
|
Pseudomonas aeruginosa UCBPP-PA14 (pau) |
5 |
| |
|
Pelobacter carbinolicus (pca) |
2 |
| |
|
Paracoccus denitrificans (pde) |
2 |
| |
|
Pseudomonas entomophila (pen) |
5 |
| |
|
Pseudomonas fluorescens Pf-5 (pfl) |
6 |
| |
|
Pseudomonas fluorescens PfO-1 (pfo) |
4 |
| |
|
Pseudoalteromonas haloplanktis (pha) |
1 |
| |
|
Parvibaculum lavamentivorans (pla) |
8 |
| |
|
Photorhabdus luminescens (plu) |
2 |
| |
|
Pasteurella multocida (pmu) |
1 |
| |
|
Pseudomonas mendocina (pmy) |
6 |
| |
|
Polaromonas naphthalenivorans (pna) |
29 |
| |
|
Polynucleobacter sp. QLW-P1DMWA-1 (pnu) |
5 |
| |
|
Polaromonas sp. JS666 (pol) |
35 |
| |
|
Pelobacter propionicus (ppd) |
4 |
| |
|
Pseudomonas putida F1 (ppf) |
3 |
| |
|
Photobacterium profundum (ppr) |
2 |
| |
|
Pseudomonas putida KT2440 (ppu) |
1 |
| |
|
Pseudomonas stutzeri (psa) |
8 |
| |
|
Pseudomonas syringae pv. phaseolicola 1448A (psp) |
4 |
| |
|
Pseudomonas syringae pv. tomato DC3000 (pst) |
1 |
| |
|
Rickettsia akari Hartford (rak) |
1 |
| |
|
Roseobacter denitrificans (rde) |
2 |
| |
|
Ralstonia eutropha H16 (reh) |
10 |
| |
|
Rhizobium etli (ret) |
2 |
| |
|
Ralstonia eutropha JMP134 (reu) |
14 |
| |
|
Rhodoferax ferrireducens (rfr) |
41 |
| |
|
Rhizobium leguminosarum (rle) |
1 |
| |
|
Ralstonia metallidurans (rme) |
13 |
| |
|
Rhodopseudomonas palustris CGA009 (rpa) |
4 |
| |
|
Rhodopseudomonas palustris HaA2 (rpb) |
3 |
| |
|
Rhodopseudomonas palustris BisB18 (rpc) |
1 |
| |
|
Rhodopseudomonas palustris BisB5 (rpd) |
1 |
| |
|
Rhodopseudomonas palustris BisA53 (rpe) |
1 |
| |
|
Rhodospirillum rubrum (rru) |
1 |
| |
|
Ralstonia solanacearum (rso) |
16 |
| |
|
Rhodobacter sphaeroides ATCC 17025 (rsq) |
1 |
| |
|
Sphingopyxis alaskensis (sal) |
2 |
| |
|
Syntrophus aciditrophicus (sat) |
9 |
| |
|
Shewanella baltica OS155 (sbl) |
1 |
| |
|
Shewanella baltica OS185 (sbm) |
1 |
| |
|
Shewanella baltica OS195 (sbn) |
1 |
| |
|
Sorangium cellulosum (scl) |
9 |
| |
|
Saccharophagus degradans (sde) |
1 |
| |
|
Shewanella denitrificans (sdn) |
2 |
| |
|
Shigella dysenteriae (sdy) |
2 |
| |
|
Salmonella enterica serovar Choleraesuis (sec) |
1 |
| |
|
Shewanella frigidimarina (sfr) |
1 |
| |
|
Syntrophobacter fumaroxidans (sfu) |
2 |
| |
|
Shigella flexneri 2457T (serotype 2a) (sfx) |
1 |
| |
|
Shewanella sp. MR-4 (she) |
1 |
| |
|
Shewanella sp. ANA-3 (shn) |
1 |
| |
|
Shewanella sp. W3-18-1 (shw) |
1 |
| |
|
Silicibacter pomeroyi (sil) |
1 |
| |
|
Silicibacter sp. TM1040 (sit) |
1 |
| |
|
Shewanella loihica (slo) |
1 |
| |
|
Sinorhizobium medicae (smd) |
5 |
| |
|
Sinorhizobium meliloti (sme) |
3 |
| |
|
Shewanella oneidensis (son) |
1 |
| |
|
Serratia proteamaculans (spe) |
1 |
| |
|
Shewanella pealeana (spl) |
3 |
| |
|
Salmonella enterica serovar Paratyphi B (spq) |
1 |
| |
|
Shewanella sediminis (sse) |
2 |
| |
|
Salmonella typhimurium LT2 (stm) |
1 |
| |
|
Sphingomonas wittichii (swi) |
7 |
| |
|
Thiobacillus denitrificans (tbd) |
125 |
| |
|
Thiomicrospira crunogena (tcx) |
2 |
| |
|
Vibrio cholerae O395 (vco) |
1 |
| |
|
Verminephrobacter eiseniae (vei) |
7 |
| |
|
Vibrio vulnificus YJ016 (vvy) |
1 |
| |
|
Xanthomonas axonopodis (xac) |
1 |
| |
|
Xanthobacter autotrophicus (xau) |
3 |
| |
|
Xanthomonas campestris pv. campestris 8004 (xcb) |
3 |
| |
|
Xanthomonas campestris pv. campestris ATCC 33913 (xcc) |
2 |
| |
|
Xanthomonas campestris pv. vesicatoria (xcv) |
3 |
| |
|
Xylella fastidiosa 9a5c (xfa) |
1 |
| |
|
Xylella fastidiosa Temecula1 (xft) |
2 |
| |
|
Xanthomonas oryzae MAFF311018 (xom) |
1 |
| |
|
Yersinia enterocolitica (yen) |
1 |
| |
|
Yersinia pestis Angola (ypg) |
1 |
| |
|
Yersinia pseudotuberculosis IP32953 (yps) |
1 |
| |
Spirochete |
|
1 |
| |
|
Leptospira interrogans serovar lai (lil) |
1 |
| Eukaryotes |
|
|
10 |
| |
Animals |
|
6 |
| |
|
Drosophila melanogaster (fruit fly) (dme) |
2 |
| |
|
Homo sapiens (human) (hsa) |
2 |
| |
|
Monodelphis domestica (opossum) (mdo) |
1 |
| |
|
Rattus norvegicus (rat) (rno) |
1 |
| |
Fungi |
|
1 |
| |
|
Yarrowia lipolytica (yli) |
1 |
| |
Plants |
|
2 |
| |
|
Cyanidioschyzon merolae (cme) |
1 |
| |
|
Oryza sativa japonica (Japanese rice) (osa) |
1 |
| |
Protists |
|
1 |
| |
|
Plasmodium yoelii (pyo) |
1 |
| NULL |
|
|
121 |
| TOTAL |
|
|
2805 |
![[space]](http://homer.ornl.gov/compbio/public/images/bluespacer.gif){kind=small}
![[space]](http://maple.lsd.ornl.gov/common/images/bluespacer.gif){kind=small}