DNA Replication, Recombination and Repair

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	L	Contig54	Nmar0052	COG0122	61	6e-11
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	L	Contig54	Nmar1540	COG0122	129	2e-31
3-methyladenine DNA glycosylase	L	Contig54	Nmar0570	COG2818	252	8e-69
3-methyladenine DNA glycosylase	L	Contig54	Nmar1057	COG2094	212	1e-56
5'-3' exonuclease (including N-terminal domain of PolI)	L	Contig54	Nmar0703	COG0258	143	2e-35
A/G-specific DNA glycosylase	L	Contig54	Nmar0052	COG1194	108	2e-25
A/G-specific DNA glycosylase	L	Contig54	Nmar1540	COG1194	49	5e-07
ATPase involved in DNA repair	L	Contig54	Nmar0090	COG0419	36	0.004
ATPase involved in DNA repair	L	Contig54	Nmar0295	COG0419	37	0.005
ATPase involved in DNA repair	L	Contig54	Nmar0329	COG0419	39	3e-04
ATPase involved in DNA repair	L	Contig54	Nmar0445	COG0497	36	0.005
ATPase involved in DNA repair	L	Contig54	Nmar0445	COG0419	40	4e-04
ATPase involved in DNA repair	L	Contig54	Nmar0483	COG0419	37	0.002
ATPase involved in DNA repair	L	Contig54	Nmar0516	COG0497	36	0.003
ATPase involved in DNA repair	L	Contig54	Nmar0651	COG0497	66	1e-11
ATPase involved in DNA repair	L	Contig54	Nmar0651	COG0419	78	3e-15
ATPase involved in DNA repair	L	Contig54	Nmar0754	COG0419	43	5e-05
ATPase involved in DNA repair	L	Contig54	Nmar1009	COG0419	35	0.006
ATPase involved in DNA repair	L	Contig54	Nmar1064	COG0419	41	1e-04
ATPase involved in DNA repair	L	Contig54	Nmar1075	COG0497	42	3e-04
ATPase involved in DNA repair	L	Contig54	Nmar1075	COG0419	44	9e-05
ATPase involved in DNA repair	L	Contig54	Nmar1104	COG0419	47	9e-06
ATPase involved in DNA repair	L	Contig54	Nmar1213	COG0497	36	0.009
ATPase involved in DNA repair	L	Contig54	Nmar1213	COG0419	109	7e-25
ATPase involved in DNA repair	L	Contig54	Nmar1245	COG0497	55	2e-08
ATPase involved in DNA repair	L	Contig54	Nmar1245	COG0419	111	2e-25
ATPase involved in DNA repair	L	Contig54	Nmar1591	COG0497	45	1e-05
ATPase involved in DNA repair	L	Contig54	Nmar1591	COG0419	48	2e-06
ATPase involved in DNA repair	L	Contig54	Nmar1654	COG0419	34	0.008
ATPase involved in DNA repair	L	Contig54	Nmar1713	COG0419	35	0.005
ATPase related to the helicase subunit of the Holliday junction resolvase	L	Contig54	Nmar0001	COG2256	45	8e-06
ATPase related to the helicase subunit of the Holliday junction resolvase	L	Contig54	Nmar0011	COG2256	61	3e-10
ATPase related to the helicase subunit of the Holliday junction resolvase	L	Contig54	Nmar0101	COG2256	60	7e-10
ATPase related to the helicase subunit of the Holliday junction resolvase	L	Contig54	Nmar0240	COG2256	72	5e-14
ATPase related to the helicase subunit of the Holliday junction resolvase	L	Contig54	Nmar0270	COG2256	66	5e-12
ATPase related to the helicase subunit of the Holliday junction resolvase	L	Contig54	Nmar1088	COG2256	51	1e-07
ATPase related to the helicase subunit of the Holliday junction resolvase	L	Contig54	Nmar1223	COG2256	56	8e-09

BASAL REPLICATION MACHINERY

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
ATPase involved in DNA replication	L	Contig54	Nmar0240	COG0470	71	1e-13
ATPase involved in DNA replication initiation	L	Contig54	Nmar0011	COG0593	56	8e-09
ATPase involved in DNA replication initiation	L	Contig54	Nmar0101	COG0593	52	2e-07
ATPase involved in DNA replication initiation	L	Contig54	Nmar1223	COG0593	50	6e-07
ATP-dependent DNA ligase	L	Contig54	Nmar1037	COG1793	331	8e-92
DNA polymerase elongation subunit (family B)	L	Contig54	Nmar0948	COG0417	368	1.0e-102
DNA polymerase II large subunit	L	Contig54	Nmar1629	COG1933	32	0.009
DNA polymerase II large subunit	L	Contig54	Nmar1794	COG1933	237	5e-63
DNA polymerase II small subunit/DNA polymerase delta subunit B	L	Contig54	Nmar0002	COG1311	307	9e-85
DNA primase	L	Contig54	Nmar1302	COG0358	86	4e-18
DNA replication protein	L	Contig54	Nmar0011	COG1484	39	0.001
DNA replication protein	L	Contig54	Nmar0087	COG1484	36	0.002
DNA replication protein	L	Contig54	Nmar0101	COG1484	44	4e-05
DNA replication protein	L	Contig54	Nmar1054	COG1484	39	9e-04
DNA replication protein	L	Contig54	Nmar1088	COG1484	40	3e-04
DNA replication protein	L	Contig54	Nmar1223	COG1484	38	0.002
Eukaryotic-type DNA primase catalytic (small) subunit	L	Contig54	Nmar0066	COG1467	139	3e-34
Eukaryotic-type DNA primase large subunit	L	Contig54	Nmar0065	COG2219	159	4e-40
NAD-dependent DNA ligase (contains BRCT domain type II)	L	Contig54	Nmar0437	COG0272	36	0.002
Primosomal protein N' (replication factor Y) - superfamily II helicase	L	Contig54	Nmar0088	COG1198	39	0.002
Primosomal protein N' (replication factor Y) - superfamily II helicase	L	Contig54	Nmar1105	COG1198	50	6e-07
Primosomal protein N' (replication factor Y) - superfamily II helicase	L	Contig54	Nmar1182	COG1198	36	0.005
Ribonuclease HI	L	Contig54	Nmar0205	COG0328	63	4e-12
Ribonuclease HII	L	Contig54	Nmar1393	COG0164	154	4e-39
Ribonuclease HIII	L	Contig54	Nmar1393	COG1039	74	8e-15
Single-stranded DNA-binding replication protein A (RPA) large (70 kD) subunit and related ssDNA-binding protein	L	Contig54	Nmar0089	COG1599	44	2e-05
Single-stranded DNA-binding replication protein A (RPA) large (70 kD) subunit and related ssDNA-binding protein	L	Contig54	Nmar0505	COG1599	33	0.004
Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit	L	Contig54	Nmar0754	COG0188	36	0.004

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Cdc6-related protein AAA superfamily ATPase	L	Contig54	Nmar0001	COG1474	257	1e-69
Cdc6-related protein AAA superfamily ATPase	L	Contig54	Nmar0011	COG1474	42	1e-04
Cdc6-related protein AAA superfamily ATPase	L	Contig54	Nmar0101	COG1474	45	2e-05
Cdc6-related protein AAA superfamily ATPase	L	Contig54	Nmar0240	COG1474	37	0.002
Cdc6-related protein AAA superfamily ATPase	L	Contig54	Nmar0270	COG1474	35	0.010
Cdc6-related protein AAA superfamily ATPase	L	Contig54	Nmar1088	COG1474	37	0.003
Cdc6-related protein AAA superfamily ATPase	L	Contig54	Nmar1223	COG1474	42	1e-04
Cdc6-related protein AAA superfamily ATPase	L	Contig54	Nmar1683	COG1474	175	6e-45
Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK cyclin H subunit	L	Contig54	Nmar0987	COG5333	47	2e-06
DNA mismatch repair enzyme (predicted ATPase)	L	Contig54	Nmar0920	COG0323	40	6e-04
DNA modification methylase	L	Contig54	Nmar1319	COG0863	114	6e-27
DNA modification methylase	L	Contig54	Nmar1775	COG0863	41	9e-05
DNA or RNA helicase of superfamily II	L	Contig54	Nmar0088	COG1061	55	3e-08
DNA or RNA helicase of superfamily II	L	Contig54	Nmar0243	COG1061	79	1e-15
DNA or RNA helicase of superfamily II	L	Contig54	Nmar0608	COG1061	49	2e-06
DNA or RNA helicase of superfamily II	L	Contig54	Nmar0726	COG1061	60	3e-10
DNA or RNA helicase of superfamily II	L	Contig54	Nmar0944	COG1061	77	2e-15
DNA or RNA helicase of superfamily II	L	Contig54	Nmar1105	COG1061	55	1e-08
DNA or RNA helicase of superfamily II	L	Contig54	Nmar1182	COG1061	71	1e-13
DNA or RNA helicase of superfamily II	L	Contig54	Nmar1320	COG1061	45	2e-05

DNA POLYMERASE III SUBUNITS

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
DNA polymerase III gamma/tau subunits	L	Contig54	Nmar0240	COG2812	117	1e-27
DNA polymerase III gamma/tau subunits	L	Contig54	Nmar0270	COG2812	66	5e-12
DNA polymerase sliding clamp subunit (PCNA homolog)	L	Contig54	Nmar1755	COG0592	95	4e-21

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
DNA repair exonuclease	L	Contig54	Nmar0002	COG0420	42	7e-05
DNA repair exonuclease	L	Contig54	Nmar1084	COG0420	34	0.009
DNA repair exonuclease	L	Contig54	Nmar1212	COG0420	119	3e-28
DNA repair exonuclease	L	Contig54	Nmar1244	COG0420	138	1e-33
DNA repair exonuclease	L	Contig54	Nmar1378	COG0420	51	6e-08
DNA repair protein	L	Contig54	Nmar0437	COG2003	35	0.006
DNA topoisomerase VI subunit A	L	Contig54	Nmar1407	COG1697	280	1e-76
DNA topoisomerase VI subunit B	L	Contig54	Nmar0303	COG1389	38	9e-04
DNA topoisomerase VI subunit B	L	Contig54	Nmar1408	COG1389	247	2e-66
Endonuclease IV	L	Contig54	Nmar0064	COG0648	239	2e-64
Endonuclease IV	L	Contig54	Nmar0151	COG0648	34	0.009
ERCC4-like helicase	L	Contig54	Nmar0088	COG1111	61	3e-10
ERCC4-like helicase	L	Contig54	Nmar0243	COG1111	69	1e-12
ERCC4-like helicase	L	Contig54	Nmar0726	COG1111	44	3e-05
ERCC4-like helicase	L	Contig54	Nmar0944	COG1111	411	1.0e-116
ERCC4-like helicase	L	Contig54	Nmar1105	COG1111	58	2e-09
ERCC4-like helicase	L	Contig54	Nmar1182	COG1111	65	8e-12
ERCC4-like helicase	L	Contig54	Nmar1320	COG1111	46	2e-05
ERCC4-type nuclease	L	Contig54	Nmar0437	COG1948	181	5e-47
Excinuclease ATPase subunit	L	Contig54	Nmar0090	COG0178	45	8e-06
Excinuclease ATPase subunit	L	Contig54	Nmar0295	COG0178	53	5e-08
Excinuclease ATPase subunit	L	Contig54	Nmar0329	COG0178	58	6e-10
Excinuclease ATPase subunit	L	Contig54	Nmar0483	COG0178	46	3e-06
Excinuclease ATPase subunit	L	Contig54	Nmar0516	COG0178	43	2e-05
Excinuclease ATPase subunit	L	Contig54	Nmar0652	COG0178	38	0.001
Excinuclease ATPase subunit	L	Contig54	Nmar1064	COG0178	52	6e-08
Excinuclease ATPase subunit	L	Contig54	Nmar1104	COG0178	1453	0.0
Excinuclease ATPase subunit	L	Contig54	Nmar1245	COG0178	39	0.002
Excinuclease ATPase subunit	L	Contig54	Nmar1654	COG0178	44	1e-05
Excinuclease ATPase subunit	L	Contig54	Nmar1713	COG0178	41	7e-05
Helicase subunit of the DNA excision repair complex	L	Contig54	Nmar0088	COG0556	59	2e-09
Helicase subunit of the DNA excision repair complex	L	Contig54	Nmar0944	COG0556	47	2e-06
Helicase subunit of the DNA excision repair complex	L	Contig54	Nmar1103	COG0556	39	0.001
Helicase subunit of the DNA excision repair complex	L	Contig54	Nmar1105	COG0556	926	0.0
Helicase subunit of the DNA excision repair complex	L	Contig54	Nmar1182	COG0556	41	2e-04
Holliday junction resolvasome helicase subunit	L	Contig54	Nmar0011	COG2255	56	1e-08
Holliday junction resolvasome helicase subunit	L	Contig54	Nmar0101	COG2255	58	3e-09
Holliday junction resolvasome helicase subunit	L	Contig54	Nmar0240	COG2255	39	4e-04
Holliday junction resolvasome helicase subunit	L	Contig54	Nmar0270	COG2255	44	2e-05
Holliday junction resolvasome helicase subunit	L	Contig54	Nmar1088	COG2255	44	2e-05
Holliday junction resolvasome helicase subunit	L	Contig54	Nmar1223	COG2255	55	2e-08
Holliday junction resolvasome helicase subunit	L	Contig54	Nmar1515	COG2255	42	4e-05
Holliday junction resolvasome helicase subunit	L	Contig54	Nmar1643	COG2255	46	6e-06
HrpA-like helicase	L	Contig54	Nmar0088	COG1643	55	3e-08
HrpA-like helicase	L	Contig54	Nmar0888	COG1643	38	0.001
HrpA-like helicase	L	Contig54	Nmar1182	COG1643	43	6e-05
Integrase	L	Contig54	Nmar0613	COG0582	43	3e-05
Methylated DNA-protein cysteine methyltransferase	L	Contig54	Nmar0388	COG0350	98	1e-22
Mg-dependent DNase	L	Contig54	Nmar1431	COG0084	164	8e-42
Micrococcal nuclease (thermonuclease) homologs	L	Contig54	Nmar1467	COG1525	67	1e-12
N6-adenine-specific methylase	L	Contig54	Nmar0057	COG0742	35	0.004
N6-adenine-specific methylase	L	Contig54	Nmar0610	COG0742	41	3e-04
N6-adenine-specific methylase	L	Contig54	Nmar0755	COG0742	35	0.005
N6-adenine-specific methylase	L	Contig54	Nmar1159	COG0742	38	8e-04
N6-adenine-specific methylase	L	Contig54	Nmar1473	COG0742	38	0.001
N6-adenine-specific methylase	L	Contig54	Nmar1775	COG0742	36	0.004
NTP pyrophosphohydrolase containing a Zn-finger probably nucleic-acid-binding	L	Contig54	Nmar0534	COG2816	34	0.003
NTP pyrophosphohydrolase containing a Zn-finger probably nucleic-acid-binding	L	Contig54	Nmar1417	COG2816	42	2e-05
NTP pyrophosphohydrolase including oxidative damage repair protein	L	Contig54	Nmar0544	COG0494	36	0.001
NTP pyrophosphohydrolase including oxidative damage repair protein	L	Contig54	Nmar1265	COG0494	51	4e-08
NTP pyrophosphohydrolase including oxidative damage repair protein	L	Contig54	Nmar1417	COG0494	56	9e-10
NTP pyrophosphohydrolase including oxidative damage repair protein	L	Contig54	Nmar1716	COG0494	58	4e-10
Nuclease subunit of the excinuclease complex	L	Contig54	Nmar0437	COG0322	40	2e-04
Nuclease subunit of the excinuclease complex	L	Contig54	Nmar1103	COG0322	453	1.0e-128
Nuclease subunit of the excinuclease complex	L	Contig54	Nmar1105	COG0322	36	0.008
Nucleosome binding factor SPN SPT16 subunit	L	Contig54	Nmar1724	COG5406	55	5e-09
Nucleotide excision repair endonuclease NEF1 RAD10 subunit	L	Contig54	Nmar0437	COG5241	34	0.008
Nucleotidyltransferase/DNA polymerase involved in DNA repair	L	Contig54	Nmar0642	COG0389	268	4e-73
Predicted ATPase involved in replication control Cdc46/Mcm family	L	Contig54	Nmar0242	COG1241	574	1.0e-165
Predicted ATPase involved in replication control Cdc46/Mcm family	L	Contig54	Nmar1643	COG1241	37	0.002
Predicted ATP-dependent endonuclease of the OLD family	L	Contig54	Nmar0560	COG3593	33	0.007
Predicted ATP-dependent endonuclease of the OLD family	L	Contig54	Nmar0651	COG3593	41	5e-04
Predicted ATP-dependent endonuclease of the OLD family	L	Contig54	Nmar1245	COG3593	38	0.003
Predicted ATP-dependent endonuclease of the OLD family	L	Contig54	Nmar1398	COG3593	60	6e-10
Predicted DNA modification methylase	L	Contig54	Nmar0057	COG1041	50	9e-08
Predicted DNA modification methylase	L	Contig54	Nmar0610	COG1041	54	3e-08
Predicted DNA modification methylase	L	Contig54	Nmar1775	COG1041	126	2e-30
Predicted EndoIII-related endonuclease	L	Contig54	Nmar0052	COG0177	233	8e-63
Predicted EndoIII-related endonuclease	L	Contig54	Nmar1540	COG0177	47	1e-06
Predicted methylated DNA-protein cysteine methyltransferase	L	Contig54	Nmar0388	COG3695	70	3e-14
Predicted N6-adenine-specific DNA methylase	L	Contig54	Nmar1775	COG0116	65	8e-12
Predicted NTP pyrophosphohydrolase	L	Contig54	Nmar1417	COG4119	42	1e-05
Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake	L	Contig54	Nmar1030	COG0758	35	0.003
Rad3-related DNA helicase	L	Contig54	Nmar0243	COG1199	44	4e-05
Rad3-related DNA helicase	L	Contig54	Nmar0888	COG1199	119	3e-28
Rad3-related DNA helicase	L	Contig54	Nmar1105	COG1199	39	0.002
Rad3-related DNA helicase	L	Contig54	Nmar1182	COG1199	37	0.002
Rad3-related DNA helicase	L	Contig54	Nmar1320	COG1199	39	0.002
RecA/RadA recombinase	L	Contig54	Nmar0087	COG0468	106	1e-24
RecA/RadA recombinase	L	Contig54	Nmar1386	COG0468	234	7e-63
RecB family exonuclease	L	Contig54	Nmar1701	COG1468	42	5e-05
RecG-like helicase	L	Contig54	Nmar0088	COG1200	38	0.003
RecG-like helicase	L	Contig54	Nmar0243	COG1200	43	6e-05
RecG-like helicase	L	Contig54	Nmar0944	COG1200	45	1e-05
RecG-like helicase	L	Contig54	Nmar1105	COG1200	50	5e-07
RecG-like helicase	L	Contig54	Nmar1182	COG1200	70	3e-13
RecG-like helicase	L	Contig54	Nmar1320	COG1200	43	7e-05
RecJ-like exonuclease contains DnaJ-type Zn finger domain	L	Contig54	Nmar0077	COG1107	35	0.004
RecJ-like exonuclease contains DnaJ-type Zn finger domain	L	Contig54	Nmar1509	COG1107	38	0.001
Recombinational DNA repair ATPase (RecF pathway)	L	Contig54	Nmar0651	COG1195	44	5e-05
Recombinational DNA repair ATPase (RecF pathway)	L	Contig54	Nmar1213	COG1195	44	4e-05
Recombinational DNA repair ATPase (RecF pathway)	L	Contig54	Nmar1245	COG1195	51	2e-07
Reverse gyrase	L	Contig54	Nmar0088	COG1110	50	1e-06
Reverse gyrase	L	Contig54	Nmar0243	COG1110	42	1e-04
Reverse gyrase	L	Contig54	Nmar1105	COG1110	40	8e-04
Reverse gyrase	L	Contig54	Nmar1182	COG1110	45	9e-06
Reverse gyrase	L	Contig54	Nmar1320	COG1110	38	0.002
Reverse gyrase	L	Contig54	Nmar1630	COG1110	33	0.009
Serine/threonine protein kinase	L	Contig54	Nmar1531	COG0515	41	5e-05
Single-stranded DNA-specific exonuclease	L	Contig54	Nmar1098	COG0608	49	6e-07
Single-stranded DNA-specific exonuclease	L	Contig54	Nmar1509	COG0608	160	2e-40
Site-specific DNA methylase	L	Contig54	Nmar1473	COG0270	212	3e-56
Site-specific DNA methylase	L	Contig54	Nmar1499	COG0338	225	4e-60
Site-specific recombinase XerC	L	Contig54	Nmar1324	COG4973	39	6e-04
Site-specific recombinase XerD	L	Contig54	Nmar0613	COG4974	53	2e-08
Site-specific recombinase XerD	L	Contig54	Nmar1219	COG4974	51	1e-07
Site-specific recombinase XerD	L	Contig54	Nmar1324	COG4974	43	4e-05
Small primase-like protein (Toprim domain)	L	Contig54	Nmar1302	COG1658	41	1e-04
Small primase-like protein (Toprim domain)	L	Contig54	Nmar1311	COG1658	42	1e-05
Superfamily II DNA and RNA helicase	L	Contig54	Nmar0088	COG0513	151	3e-37
Superfamily II DNA and RNA helicase	L	Contig54	Nmar0243	COG0513	89	1e-18
Superfamily II DNA and RNA helicase	L	Contig54	Nmar0726	COG0513	38	0.002
Superfamily II DNA and RNA helicase	L	Contig54	Nmar0944	COG0513	76	5e-15
Superfamily II DNA and RNA helicase	L	Contig54	Nmar1105	COG0513	64	4e-11
Superfamily II DNA and RNA helicase	L	Contig54	Nmar1182	COG0513	387	1.0e-109
Superfamily II DNA and RNA helicase	L	Contig54	Nmar1320	COG0513	134	2e-32
Superfamily II DNA helicase	L	Contig54	Nmar0088	COG0514	97	6e-21
Superfamily II DNA helicase	L	Contig54	Nmar0243	COG0514	57	7e-09
Superfamily II DNA helicase	L	Contig54	Nmar0944	COG0514	46	5e-06
Superfamily II DNA helicase	L	Contig54	Nmar1105	COG0514	57	4e-09
Superfamily II DNA helicase	L	Contig54	Nmar1182	COG0514	109	5e-25
Superfamily II DNA helicase	L	Contig54	Nmar1320	COG0514	75	2e-14
Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein)	L	Contig54	Nmar0088	COG4098	56	1e-08
Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein)	L	Contig54	Nmar0944	COG4098	44	2e-05
Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein)	L	Contig54	Nmar1105	COG4098	62	1e-10
Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein)	L	Contig54	Nmar1182	COG4098	41	2e-04
Superfamily II DNA/RNA helicase SNF2 family	L	Contig54	Nmar0726	COG0553	154	1e-38
Superfamily II DNA/RNA helicase SNF2 family	L	Contig54	Nmar0944	COG0553	60	4e-10
Superfamily II DNA/RNA helicase SNF2 family	L	Contig54	Nmar1182	COG0553	36	0.007
Superfamily II RNA helicase	L	Contig54	Nmar0088	COG4581	70	1e-12
Superfamily II RNA helicase	L	Contig54	Nmar0243	COG4581	173	4e-44
Superfamily II RNA helicase	L	Contig54	Nmar0944	COG4581	58	1e-09
Superfamily II RNA helicase	L	Contig54	Nmar1182	COG4581	46	6e-06
Superfamily II RNA helicase	L	Contig54	Nmar1320	COG4581	54	3e-08
Topoisomerase IB	L	Contig54	Nmar1322	COG3569	71	3e-13
Transcription-repair coupling factor (superfamily II helicase)	L	Contig54	Nmar0088	COG1197	38	0.003
Transcription-repair coupling factor (superfamily II helicase)	L	Contig54	Nmar0944	COG1197	44	2e-05
Transcription-repair coupling factor (superfamily II helicase)	L	Contig54	Nmar1105	COG1197	130	3e-31
Transcription-repair coupling factor (superfamily II helicase)	L	Contig54	Nmar1182	COG1197	42	1e-04
Uncharacterized protein related to Endonuclease III	L	Contig54	Nmar0052	COG2231	88	4e-19
Uncharacterized protein related to Endonuclease III	L	Contig54	Nmar1540	COG2231	40	2e-04
Uracil-DNA glycosylase	L	Contig54	Nmar0366	COG1573	109	2e-25
Uracil-DNA glycosylase	L	Contig54	Nmar1056	COG1573	152	2e-38

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