Translation, Ribosomal Structure and Biogenesis

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
16S RNA G1207 methylase RsmC	J	Contig54	Nmar0057	COG2813	43	1e-05
16S RNA G1207 methylase RsmC	J	Contig54	Nmar0294	COG2813	35	0.007
16S RNA G1207 methylase RsmC	J	Contig54	Nmar0610	COG2813	54	3e-08
16S RNA G1207 methylase RsmC	J	Contig54	Nmar0629	COG2813	37	0.001
16S RNA G1207 methylase RsmC	J	Contig54	Nmar1380	COG2813	53	1e-08
16S RNA G1207 methylase RsmC	J	Contig54	Nmar1457	COG2813	48	1e-06
16S RNA G1207 methylase RsmC	J	Contig54	Nmar1722	COG2813	41	1e-04
23S rRNA methylase	J	Contig54	Nmar0057	COG0293	34	0.009
23S rRNA methylase	J	Contig54	Nmar1395	COG0293	193	6e-51
2'-5' RNA ligase	J	Contig54	Nmar1781	COG1514	136	9e-34
2-methylthioadenine synthetase	J	Contig54	Nmar0336	COG0621	47	2e-06
2-methylthioadenine synthetase	J	Contig54	Nmar1261	COG0621	382	1.0e-107
2-methylthioadenine synthetase	J	Contig54	Nmar1388	COG0621	46	8e-06

AMINOACYL-TRNA SYNTHETASES AND ALTERNATIVE SYSTEMS FOR AMINO ACID ACTIVATION

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Alanyl-tRNA synthetase	J	Contig54	Nmar0368	COG0013	543	1.0e-155
Alanyl-tRNA synthetase	J	Contig54	Nmar1098	COG0013	38	0.001
Arginyl-tRNA synthetase	J	Contig54	Nmar0367	COG0018	39	0.002
Arginyl-tRNA synthetase	J	Contig54	Nmar0686	COG0018	377	1.0e-105
Aspartyl/asparaginyl-tRNA synthetase	J	Contig54	Nmar0871	COG0017	418	1.0e-118
Aspartyl/asparaginyl-tRNA synthetase	J	Contig54	Nmar1066	COG0017	451	1.0e-128
Aspartyl-tRNA synthetase	J	Contig54	Nmar0871	COG0173	173	3e-44
Aspartyl-tRNA synthetase	J	Contig54	Nmar1066	COG0173	186	3e-48
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase	J	Contig54	Nmar0869	COG0154	447	1.0e-126
Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog)	J	Contig54	Nmar0099	COG0064	105	1e-23
Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog)	J	Contig54	Nmar0868	COG0064	487	1.0e-139
Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit	J	Contig54	Nmar0870	COG0721	33	0.003
Cysteinyl-tRNA synthetase	J	Contig54	Nmar0367	COG0215	57	6e-09
Cysteinyl-tRNA synthetase	J	Contig54	Nmar0686	COG0215	38	0.002
Cysteinyl-tRNA synthetase	J	Contig54	Nmar0963	COG0215	45	1e-05
Cysteinyl-tRNA synthetase	J	Contig54	Nmar0967	COG0215	547	1.0e-157
Cysteinyl-tRNA synthetase	J	Contig54	Nmar1120	COG0215	46	2e-05
Cysteinyl-tRNA synthetase	J	Contig54	Nmar1477	COG0215	44	4e-05
Glutamyl- and glutaminyl-tRNA synthetase	J	Contig54	Nmar0311	COG0008	309	3e-85
Glutamyl- and glutaminyl-tRNA synthetase	J	Contig54	Nmar0578	COG0008	46	8e-06
Glutamyl- and glutaminyl-tRNA synthetase	J	Contig54	Nmar0967	COG0008	36	0.004
Glycyl-tRNA synthetase beta subunit	J	Contig54	Nmar0507	COG0751	36	0.003
Glycyl-tRNA synthetase beta subunit	J	Contig54	Nmar0686	COG0751	43	5e-05
Glycyl-tRNA synthetase (class II)	J	Contig54	Nmar0063	COG0423	354	7e-99
Glycyl-tRNA synthetase (class II)	J	Contig54	Nmar0658	COG0423	46	6e-06
Glycyl-tRNA synthetase (class II)	J	Contig54	Nmar0926	COG0423	61	2e-10
Histidyl-tRNA synthetase	J	Contig54	Nmar0063	COG0124	42	8e-05
Histidyl-tRNA synthetase	J	Contig54	Nmar0236	COG0124	302	4e-83
Histidyl-tRNA synthetase	J	Contig54	Nmar0926	COG0124	76	5e-15
Isoleucyl-tRNA synthetase	J	Contig54	Nmar0367	COG0060	141	2e-34
Isoleucyl-tRNA synthetase	J	Contig54	Nmar0963	COG0060	59	7e-10
Isoleucyl-tRNA synthetase	J	Contig54	Nmar0967	COG0060	52	1e-07
Isoleucyl-tRNA synthetase	J	Contig54	Nmar1120	COG0060	669	0.0
Isoleucyl-tRNA synthetase	J	Contig54	Nmar1477	COG0060	377	1.0e-105
Leucyl-tRNA synthetase	J	Contig54	Nmar0367	COG0495	601	1.0e-173
Leucyl-tRNA synthetase	J	Contig54	Nmar0686	COG0495	42	2e-04
Leucyl-tRNA synthetase	J	Contig54	Nmar0963	COG0495	94	2e-20
Leucyl-tRNA synthetase	J	Contig54	Nmar0967	COG0495	54	2e-08
Leucyl-tRNA synthetase	J	Contig54	Nmar1120	COG0495	150	6e-37
Leucyl-tRNA synthetase	J	Contig54	Nmar1477	COG0495	152	1e-37
Lysyl-tRNA synthetase (class I)	J	Contig54	Nmar0578	COG1384	360	1.0e-100
Lysyl-tRNA synthetase (class I)	J	Contig54	Nmar0963	COG1384	39	6e-04
Lysyl-tRNA synthetase (class I)	J	Contig54	Nmar1120	COG1384	39	0.001
Lysyl-tRNA synthetase (class II)	J	Contig54	Nmar0871	COG1190	161	1e-40
Lysyl-tRNA synthetase (class II)	J	Contig54	Nmar1066	COG1190	169	3e-43
Lysyl-tRNA synthetase (class II)	J	Contig54	Nmar1489	COG1190	39	6e-04
Phenylalanyl-tRNA synthetase alpha subunit	J	Contig54	Nmar1489	COG0016	290	2e-79
Phenylalanyl-tRNA synthetase alpha subunit	J	Contig54	Nmar1489	COG2024	82	1e-16
Phenylalanyl-tRNA synthetase beta subunit	J	Contig54	Nmar1488	COG0072	295	7e-81
Prolyl-tRNA synthetase	J	Contig54	Nmar0063	COG0442	46	6e-06
Prolyl-tRNA synthetase	J	Contig54	Nmar0658	COG0442	394	1.0e-111
Prolyl-tRNA synthetase	J	Contig54	Nmar0926	COG0442	61	3e-10
Prolyl-tRNA synthetase	J	Contig54	Nmar1511	COG0442	52	9e-08
Seryl-tRNA synthetase	J	Contig54	Nmar0658	COG0172	36	0.005
Seryl-tRNA synthetase	J	Contig54	Nmar0754	COG0172	36	0.006
Seryl-tRNA synthetase	J	Contig54	Nmar0926	COG0172	50	5e-07
Seryl-tRNA synthetase	J	Contig54	Nmar1511	COG0172	517	1.0e-148
Threonyl-tRNA synthetase	J	Contig54	Nmar0063	COG0441	51	2e-07
Threonyl-tRNA synthetase	J	Contig54	Nmar0236	COG0441	46	3e-06
Threonyl-tRNA synthetase	J	Contig54	Nmar0658	COG0441	85	1e-17
Threonyl-tRNA synthetase	J	Contig54	Nmar0926	COG0441	405	1.0e-114
Threonyl-tRNA synthetase	J	Contig54	Nmar1511	COG0441	52	1e-07
Tryptophanyl-tRNA synthetase	J	Contig54	Nmar1490	COG0180	253	2e-68
Tryptophanyl-tRNA synthetase	J	Contig54	Nmar1751	COG0180	86	3e-18
Tyrosyl-tRNA synthetase	J	Contig54	Nmar1490	COG0162	49	4e-07
Tyrosyl-tRNA synthetase	J	Contig54	Nmar1751	COG0162	205	4e-54
Valyl-tRNA synthetase	J	Contig54	Nmar0367	COG0525	297	3e-81
Valyl-tRNA synthetase	J	Contig54	Nmar0963	COG0525	58	2e-09
Valyl-tRNA synthetase	J	Contig54	Nmar0967	COG0525	45	1e-05
Valyl-tRNA synthetase	J	Contig54	Nmar1120	COG0525	393	1.0e-110
Valyl-tRNA synthetase	J	Contig54	Nmar1477	COG0525	693	0.0

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Cytosine/adenosine deaminase	J	Contig54	Nmar0947	COG0590	42	3e-05
Cytosine/adenosine deaminase	J	Contig54	Nmar1471	COG0590	35	0.002
Dimethyladenosine transferase (rRNA methylation)	J	Contig54	Nmar0057	COG0030	36	0.001
Dimethyladenosine transferase (rRNA methylation)	J	Contig54	Nmar0690	COG0030	36	0.003
Dimethyladenosine transferase (rRNA methylation)	J	Contig54	Nmar1380	COG0030	44	5e-06
Dimethyladenosine transferase (rRNA methylation)	J	Contig54	Nmar1381	COG0030	160	9e-41
Dimethyladenosine transferase (rRNA methylation)	J	Contig54	Nmar1722	COG0030	36	0.003
Dimethyladenosine transferase (rRNA methylation)	J	Contig54	Nmar1775	COG0030	50	2e-07
Diphthamide biosynthesis methyltransferase	J	Contig54	Nmar0005	COG1798	52	3e-08
Diphthamide biosynthesis methyltransferase	J	Contig54	Nmar0058	COG1798	47	1e-06
Diphthamide biosynthesis methyltransferase	J	Contig54	Nmar0059	COG1798	54	8e-09
Diphthamide biosynthesis methyltransferase	J	Contig54	Nmar0492	COG1798	50	2e-07
Diphthamide biosynthesis methyltransferase	J	Contig54	Nmar1297	COG1798	221	6e-59
Diphthamide biosynthesis methyltransferase	J	Contig54	Nmar1752	COG1798	51	7e-08
Diphthamide synthase subunit DPH2	J	Contig54	Nmar1563	COG1736	215	5e-57
Fibrillarin-like rRNA methylase	J	Contig54	Nmar1392	COG1889	269	8e-74
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)	J	Contig54	Nmar0273	COG0189	59	8e-10
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)	J	Contig54	Nmar0846	COG0189	48	1e-06
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)	J	Contig54	Nmar1008	COG0189	48	2e-06
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)	J	Contig54	Nmar1085	COG0189	37	0.008
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)	J	Contig54	Nmar1119	COG0189	49	5e-07
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)	J	Contig54	Nmar1288	COG0189	166	1e-42
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)	J	Contig54	Nmar1295	COG0189	179	2e-46
Glu-tRNAGln amidotransferase subunit E (contains GAD domain)	J	Contig54	Nmar0099	COG2511	607	1.0e-175
Glu-tRNAGln amidotransferase subunit E (contains GAD domain)	J	Contig54	Nmar0868	COG2511	108	9e-25
GTP-binding protein required for 40S ribosome biogenesis	J	Contig54	Nmar1591	COG5192	40	6e-04
L-asparaginase/ Glu-tRNAGln amidotransferase subunit D	J	Contig54	Nmar0100	COG0252	306	2e-84
Methionyl-tRNA synthetase	J	Contig54	Nmar0311	COG0143	40	4e-04
Methionyl-tRNA synthetase	J	Contig54	Nmar0367	COG0143	83	9e-17
Methionyl-tRNA synthetase	J	Contig54	Nmar0686	COG0143	37	0.004
Methionyl-tRNA synthetase	J	Contig54	Nmar0963	COG0143	541	1.0e-155
Methionyl-tRNA synthetase	J	Contig54	Nmar0967	COG0143	53	4e-08
Methionyl-tRNA synthetase	J	Contig54	Nmar1120	COG0143	80	1e-15
Methionyl-tRNA synthetase	J	Contig54	Nmar1477	COG0143	85	2e-17
Methylase of polypeptide chain release factors	J	Contig54	Nmar0057	COG2890	52	4e-08
Methylase of polypeptide chain release factors	J	Contig54	Nmar0190	COG2890	36	0.002
Methylase of polypeptide chain release factors	J	Contig54	Nmar0294	COG2890	35	0.008
Methylase of polypeptide chain release factors	J	Contig54	Nmar0610	COG2890	53	8e-08
Methylase of polypeptide chain release factors	J	Contig54	Nmar0629	COG2890	37	0.001
Methylase of polypeptide chain release factors	J	Contig54	Nmar0690	COG2890	42	5e-05
Methylase of polypeptide chain release factors	J	Contig54	Nmar1380	COG2890	82	2e-17
Methylase of polypeptide chain release factors	J	Contig54	Nmar1381	COG2890	39	3e-04
Methylase of polypeptide chain release factors	J	Contig54	Nmar1394	COG2890	36	0.006
Methylase of polypeptide chain release factors	J	Contig54	Nmar1457	COG2890	50	3e-07
Methylase of polypeptide chain release factors	J	Contig54	Nmar1722	COG2890	38	0.001
Methylase of polypeptide chain release factors	J	Contig54	Nmar1775	COG2890	39	4e-04
N2 N2-dimethylguanosine tRNA methyltransferase	J	Contig54	Nmar0294	COG1867	44	1e-05
N2 N2-dimethylguanosine tRNA methyltransferase	J	Contig54	Nmar1394	COG1867	302	3e-83
N2 N2-dimethylguanosine tRNA methyltransferase	J	Contig54	Nmar1775	COG1867	35	0.005
NAD(FAD)-utilizing enzyme possibly involved in translation	J	Contig54	Nmar0631	COG1206	37	0.003
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)	J	Contig54	Nmar0124	COG1208	240	2e-64
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)	J	Contig54	Nmar0157	COG1208	80	1e-16
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)	J	Contig54	Nmar0245	COG1208	52	2e-08
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)	J	Contig54	Nmar0424	COG1208	121	6e-29
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)	J	Contig54	Nmar0541	COG1208	222	1e-59
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)	J	Contig54	Nmar0662	COG1208	77	1e-15
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)	J	Contig54	Nmar0843	COG1208	172	1e-44
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)	J	Contig54	Nmar1581	COG1208	42	3e-05
Peptide chain release factor RF-3	J	Contig54	Nmar0229	COG4108	54	3e-08
Peptide chain release factor RF-3	J	Contig54	Nmar0748	COG4108	103	7e-23
Peptide chain release factor RF-3	J	Contig54	Nmar1034	COG4108	49	6e-07
Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)	J	Contig54	Nmar0077	COG1185	52	4e-08
Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)	J	Contig54	Nmar0431	COG1185	47	1e-06
Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)	J	Contig54	Nmar0432	COG1185	83	2e-17
Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)	J	Contig54	Nmar0433	COG1185	36	0.002
Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)	J	Contig54	Nmar1235	COG1185	41	4e-05
Predicted exonuclease of the beta-lactamase fold involved in RNA processing	J	Contig54	Nmar1113	COG1236	83	3e-17
Predicted exonuclease of the beta-lactamase fold involved in RNA processing	J	Contig54	Nmar1539	COG1236	294	8e-81
Predicted exonuclease of the beta-lactamase fold involved in RNA processing	J	Contig54	Nmar1727	COG1236	281	1e-76
Predicted exosome subunit	J	Contig54	Nmar0430	COG1500	206	1e-54
Predicted exosome subunit	J	Contig54	Nmar1513	COG1325	75	3e-15
Predicted GTPase probable translation factor	J	Contig54	Nmar0684	COG0012	81	2e-16
Predicted GTPase probable translation factor	J	Contig54	Nmar0980	COG0012	253	1e-68
Predicted GTPase probable translation factor	J	Contig54	Nmar1534	COG0012	302	4e-83
Predicted pseudouridylate synthase	J	Contig54	Nmar0406	COG1258	49	5e-07
Predicted pseudouridylate synthase	J	Contig54	Nmar0532	COG1258	197	1e-51
Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain)	J	Contig54	Nmar0431	COG1096	50	1e-07
Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain)	J	Contig54	Nmar1566	COG1096	82	2e-17
Predicted RNA-binding protein (contains PUA domain)	J	Contig54	Nmar0406	COG2016	53	3e-08
Predicted RNA-binding protein (contains PUA domain)	J	Contig54	Nmar0695	COG2016	100	5e-23
Predicted RNA-binding protein	J	Contig54	Nmar1382	COG1491	162	1e-41
Predicted RNA-binding protein of the translin family	J	Contig54	Nmar0319	COG2178	124	3e-30
Predicted RNA methylase	J	Contig54	Nmar0057	COG2263	39	2e-04
Predicted RNA methylase	J	Contig54	Nmar0294	COG2263	39	4e-04
Predicted RNA methylase	J	Contig54	Nmar0610	COG2263	47	4e-06
Predicted RNA methylase	J	Contig54	Nmar0839	COG2263	40	2e-04
Predicted RNA methylase	J	Contig54	Nmar1457	COG2263	40	3e-04
Predicted RNA methylase	J	Contig54	Nmar1473	COG2263	39	4e-04
Predicted RNA methylase	J	Contig54	Nmar1775	COG2263	46	4e-06
Predicted rRNA methylase	J	Contig54	Nmar1395	COG1189	49	2e-07
Predicted subunit of tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain	J	Contig54	Nmar1466	COG2117	45	8e-06
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain	J	Contig54	Nmar0040	COG0482	38	6e-04
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain	J	Contig54	Nmar0105	COG0482	41	1e-04
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain	J	Contig54	Nmar0340	COG0482	50	2e-07
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain	J	Contig54	Nmar0530	COG0482	38	5e-04
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain	J	Contig54	Nmar0966	COG0482	37	0.001
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain	J	Contig54	Nmar1286	COG0482	40	4e-04
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain	J	Contig54	Nmar1466	COG0482	41	1e-04
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain	J	Contig54	Nmar1573	COG0482	38	0.003
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain	J	Contig54	Nmar1725	COG0482	119	2e-28
Predicted Zn-ribbon RNA-binding protein	J	Contig54	Nmar0076	COG2260	58	1e-10
Predicted Zn-ribbon RNA-binding protein with a function in translation	J	Contig54	Nmar1221	COG2888	41	2e-05
Protein implicated in ribosomal biogenesis Nop56p homolog	J	Contig54	Nmar1391	COG1498	261	7e-71
Pseudouridine synthase	J	Contig54	Nmar0406	COG0130	224	1e-59
PUA domain (predicted RNA-binding domain)	J	Contig54	Nmar0695	COG5270	42	2e-05
PUA domain (predicted RNA-binding domain)	J	Contig54	Nmar1603	COG5270	35	0.004
Putative translation factor (SUA5)	J	Contig54	Nmar1427	COG0009	176	6e-46
Putative translation initiation inhibitor yjgF family	J	Contig54	Nmar1092	COG0251	84	3e-18
Queuine/archaeosine tRNA-ribosyltransferase	J	Contig54	Nmar1536	COG0343	293	2e-80
Queuine tRNA-ribosyltransferase contain PUA domain	J	Contig54	Nmar1536	COG1549	75	9e-15
Queuine tRNA-ribosyltransferase contain PUA domain	J	Contig54	Nmar1603	COG1549	42	2e-05
Ribosomal protein L11 methylase	J	Contig54	Nmar0057	COG2264	56	2e-09
Ribosomal protein L11 methylase	J	Contig54	Nmar0610	COG2264	43	1e-04
Ribosomal protein L11 methylase	J	Contig54	Nmar0629	COG2264	37	8e-04
Ribosomal protein L11 methylase	J	Contig54	Nmar0690	COG2264	41	8e-05
Ribosomal protein L11 methylase	J	Contig54	Nmar1457	COG2264	51	2e-07
Ribosomal protein L11 methylase	J	Contig54	Nmar1775	COG2264	41	2e-04
Ribosomal protein S19E (S16A)	J	Contig54	Nmar1624	COG2238	162	8e-42
Ribosomal protein S25	J	Contig54	Nmar0930	COG4901	32	0.006
Ribosomal protein S26	J	Contig54	Nmar0923	COG4830	82	6e-18
Ribosomal protein S30	J	Contig54	Nmar1387	COG4919	32	0.010

RIBOSOMAL PROTEINS - LARGE SUBUNIT

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Ribosomal protein HS6-type (S12/L30/L7a)	J	Contig54	Nmar0225	COG1358	98	2e-22
Ribosomal protein HS6-type (S12/L30/L7a)	J	Contig54	Nmar0352	COG1358	35	0.001
Ribosomal protein L10	J	Contig54	Nmar0381	COG0244	68	1e-12
Ribosomal protein L11	J	Contig54	Nmar0385	COG0080	137	3e-34
Ribosomal protein L12E/L44/L45/RPP1/RPP2	J	Contig54	Nmar0374	COG2058	43	4e-06
Ribosomal protein L13	J	Contig54	Nmar0426	COG0102	90	1e-19
Ribosomal protein L14	J	Contig54	Nmar0800	COG0093	116	9e-28
Ribosomal protein L15	J	Contig54	Nmar0401	COG0200	48	3e-07
Ribosomal protein L15E	J	Contig54	Nmar1254	COG1632	123	7e-30
Ribosomal protein L16/L10E	J	Contig54	Nmar0449	COG0197	78	4e-16
Ribosomal protein L18	J	Contig54	Nmar0398	COG0256	93	1e-20
Ribosomal protein L18E	J	Contig54	Nmar0427	COG1727	103	4e-24
Ribosomal protein L19E	J	Contig54	Nmar0390	COG2147	96	1e-21
Ribosomal protein L1	J	Contig54	Nmar0382	COG0081	133	1e-32
Ribosomal protein L21E	J	Contig54	Nmar1384	COG2139	75	9e-16
Ribosomal protein L22	J	Contig54	Nmar0805	COG0091	87	6e-19
Ribosomal protein L23	J	Contig54	Nmar0807	COG0089	57	3e-10
Ribosomal protein L24E	J	Contig54	Nmar0227	COG2075	62	7e-12
Ribosomal protein L2	J	Contig54	Nmar0102	COG0090	180	8e-47
Ribosomal protein L30E	J	Contig54	Nmar0225	COG1911	38	2e-04
Ribosomal protein L30E	J	Contig54	Nmar0352	COG1911	61	2e-11
Ribosomal protein L30/L7E	J	Contig54	Nmar0400	COG1841	46	9e-07
Ribosomal protein L31E	J	Contig54	Nmar1263	COG2097	63	1e-11
Ribosomal protein L32E	J	Contig54	Nmar0391	COG1717	113	5e-27
Ribosomal protein L37AE/L43A	J	Contig54	Nmar0434	COG1997	55	8e-10
Ribosomal protein L37E	J	Contig54	Nmar0220	COG2126	42	8e-06
Ribosomal protein L39E	J	Contig54	Nmar1264	COG2167	40	5e-05
Ribosomal protein L3	J	Contig54	Nmar0809	COG0087	117	8e-28
Ribosomal protein L40E	J	Contig54	Nmar1125	COG1552	33	0.004
Ribosomal protein L44E	J	Contig54	Nmar1579	COG1631	67	2e-13
Ribosomal protein L4	J	Contig54	Nmar0808	COG0088	112	3e-26
Ribosomal protein L5	J	Contig54	Nmar0797	COG0094	147	4e-37
Ribosomal protein L6P/L9E	J	Contig54	Nmar0794	COG0097	105	1e-24

RIBOSOMAL PROTEINS - SMALL SUBUNIT

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Predicted RNA binding protein (contains ribosomal protein S1 domain)	J	Contig54	Nmar0077	COG1098	47	2e-06
Predicted RNA binding protein (contains ribosomal protein S1 domain)	J	Contig54	Nmar1235	COG1098	45	3e-06
Ribosomal protein S10	J	Contig54	Nmar1033	COG0051	102	4e-24
Ribosomal protein S11	J	Contig54	Nmar1450	COG0100	91	1e-20
Ribosomal protein S12	J	Contig54	Nmar0354	COG0048	136	9e-34
Ribosomal protein S13	J	Contig54	Nmar0325	COG0099	110	4e-26
Ribosomal protein S14	J	Contig54	Nmar0796	COG0199	36	6e-04
Ribosomal protein S15P/S13E	J	Contig54	Nmar1508	COG0184	62	2e-11
Ribosomal protein S17	J	Contig54	Nmar0801	COG0186	66	7e-13
Ribosomal protein S17E	J	Contig54	Nmar1430	COG1383	55	3e-09
Ribosomal protein S19	J	Contig54	Nmar0806	COG0185	103	4e-24
Ribosomal protein S1	J	Contig54	Nmar0077	COG0539	51	7e-08
Ribosomal protein S1	J	Contig54	Nmar1235	COG0539	43	2e-05
Ribosomal protein S27AE	J	Contig54	Nmar0534	COG1998	59	7e-11
Ribosomal protein S27E	J	Contig54	Nmar1580	COG2051	64	2e-12
Ribosomal protein S28E/S33	J	Contig54	Nmar0226	COG2053	73	5e-15
Ribosomal protein S2	J	Contig54	Nmar0316	COG0052	125	2e-30
Ribosomal protein S3AE	J	Contig54	Nmar1512	COG1890	171	4e-44
Ribosomal protein S3	J	Contig54	Nmar0353	COG0092	36	0.001
Ribosomal protein S3	J	Contig54	Nmar0804	COG0092	158	5e-40
Ribosomal protein S4 and related protein	J	Contig54	Nmar0324	COG0522	86	2e-18
Ribosomal protein S4E	J	Contig54	Nmar0798	COG1471	189	1e-49
Ribosomal protein S5	J	Contig54	Nmar0399	COG0098	131	3e-32
Ribosomal protein S6E (S10)	J	Contig54	Nmar0071	COG2125	110	4e-26
Ribosomal protein S7	J	Contig54	Nmar0355	COG0049	141	5e-35
Ribosomal protein S8	J	Contig54	Nmar0795	COG0096	127	2e-31
Ribosomal protein S8E	J	Contig54	Nmar0520	COG2007	88	3e-19
Ribosomal protein S9	J	Contig54	Nmar0425	COG0103	116	5e-28

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Ribosome-associated chaperone zuotin	J	Contig54	Nmar0097	COG5269	44	1e-05
Ribosome-associated protein Y (PSrp-1)	J	Contig54	Nmar0675	COG1544	33	0.005
RNA-binding protein involved in rRNA processing	J	Contig54	Nmar0518	COG3277	34	0.002
RNA-binding protein of the Puf family translational repressor	J	Contig54	Nmar0456	COG5099	46	4e-05
RNA-binding protein Rrp4 and related protein (contain S1 domain and KH domain)	J	Contig54	Nmar0431	COG1097	193	7e-51
RNA-binding protein Rrp4 and related protein (contain S1 domain and KH domain)	J	Contig54	Nmar1235	COG1097	34	0.008
RNA-binding protein Rrp4 and related protein (contain S1 domain and KH domain)	J	Contig54	Nmar1566	COG1097	43	2e-05
RNase PH	J	Contig54	Nmar0432	COG0689	259	1e-70
RNase PH	J	Contig54	Nmar0433	COG0689	80	1e-16
RNase PH-related exoribonuclease	J	Contig54	Nmar0432	COG2123	78	7e-16
RNase PH-related exoribonuclease	J	Contig54	Nmar0433	COG2123	267	6e-73
RNase P/RNase MRP subunit p29	J	Contig54	Nmar0802	COG1588	66	6e-13
rRNA methylase	J	Contig54	Nmar1606	COG0566	36	0.002
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase	J	Contig54	Nmar0057	COG2265	40	1e-04
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase	J	Contig54	Nmar0294	COG2265	41	8e-05
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase	J	Contig54	Nmar0610	COG2265	50	5e-07
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase	J	Contig54	Nmar1394	COG2265	40	2e-04
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase	J	Contig54	Nmar1457	COG2265	38	0.001
SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase	J	Contig54	Nmar1775	COG2265	40	3e-04
Selenocysteine-specific translation elongation factor	J	Contig54	Nmar0072	COG3276	145	8e-36
Selenocysteine-specific translation elongation factor	J	Contig54	Nmar0229	COG3276	58	2e-09
Selenocysteine-specific translation elongation factor	J	Contig54	Nmar0748	COG3276	61	3e-10
Selenocysteine-specific translation elongation factor	J	Contig54	Nmar0961	COG3276	166	2e-42
Selenocysteine-specific translation elongation factor	J	Contig54	Nmar1034	COG3276	168	5e-43
Selenocysteine-specific translation elongation factor	J	Contig54	Nmar1605	COG3276	45	7e-06
Superfamily II DNA and RNA helicase	J	Contig54	Nmar0088	COG0513	151	3e-37
Superfamily II DNA and RNA helicase	J	Contig54	Nmar0243	COG0513	89	1e-18
Superfamily II DNA and RNA helicase	J	Contig54	Nmar0726	COG0513	38	0.002
Superfamily II DNA and RNA helicase	J	Contig54	Nmar0944	COG0513	76	5e-15
Superfamily II DNA and RNA helicase	J	Contig54	Nmar1105	COG0513	64	4e-11
Superfamily II DNA and RNA helicase	J	Contig54	Nmar1182	COG0513	387	1.0e-109
Superfamily II DNA and RNA helicase	J	Contig54	Nmar1320	COG0513	134	2e-32
Translation elongation factor EF-1alpha (GTPase)	J	Contig54	Nmar0072	COG5256	92	7e-20
Translation elongation factor EF-1alpha (GTPase)	J	Contig54	Nmar0229	COG5256	59	8e-10
Translation elongation factor EF-1alpha (GTPase)	J	Contig54	Nmar0748	COG5256	67	6e-12
Translation elongation factor EF-1alpha (GTPase)	J	Contig54	Nmar0961	COG5256	73	2e-14
Translation elongation factor EF-1alpha (GTPase)	J	Contig54	Nmar1034	COG5256	582	1.0e-167
Translation elongation factor EF-1alpha (GTPase)	J	Contig54	Nmar1605	COG5256	39	8e-04

TRANSLATION FACTORS AND ENZYMES INVOLVED IN TRANSLATION

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
GTPase - translation elongation factors	J	Contig54	Nmar0072	COG0050	143	2e-35
GTPase - translation elongation factors	J	Contig54	Nmar0229	COG0050	47	4e-06
GTPase - translation elongation factors	J	Contig54	Nmar0748	COG0050	77	5e-15
GTPase - translation elongation factors	J	Contig54	Nmar0961	COG0050	46	4e-06
GTPase - translation elongation factors	J	Contig54	Nmar1034	COG0050	216	3e-57
Methionine aminopeptidase	J	Contig54	Nmar0601	COG0024	170	1e-43
Methionine aminopeptidase	J	Contig54	Nmar1724	COG0024	96	5e-21
Methionyl-tRNA formyltransferase	J	Contig54	Nmar0134	COG0223	70	1e-13
Methionyl-tRNA formyltransferase	J	Contig54	Nmar0223	COG0223	78	1e-15
Methionyl-tRNA formyltransferase	J	Contig54	Nmar1114	COG0223	66	2e-12
Peptide chain release factor 1 (eRF1)	J	Contig54	Nmar0109	COG1503	47	2e-06
Peptide chain release factor 1 (eRF1)	J	Contig54	Nmar0882	COG1503	311	9e-86
Predicted translation initiation factor 2B subunit eIF-2B alpha/beta/delta family	J	Contig54	Nmar0169	COG0182	438	1.0e-124
Protein chain release factor A	J	Contig54	Nmar0577	COG0216	34	0.008
Protein chain release factor A	J	Contig54	Nmar1591	COG0216	41	2e-04
Translation elongation factor EF-1beta	J	Contig54	Nmar1222	COG2092	75	8e-16
Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)	J	Contig54	Nmar0529	COG0231	91	2e-20
Translation elongation factors (GTPase)	J	Contig54	Nmar0072	COG0480	62	7e-11
Translation elongation factors (GTPase)	J	Contig54	Nmar0229	COG0480	75	2e-14
Translation elongation factors (GTPase)	J	Contig54	Nmar0748	COG0480	537	1.0e-154
Translation elongation factors (GTPase)	J	Contig54	Nmar1034	COG0480	77	2e-15
Translation elongation factors (GTPase)	J	Contig54	Nmar1301	COG0480	34	0.008
Translation initiation factor 1 (eIF-1/SUI1) and related protein	J	Contig54	Nmar0622	COG0023	97	3e-22
Translation initiation factor 1 (IF-1)	J	Contig54	Nmar0526	COG0361	70	3e-14
Translation initiation factor 1 (IF-1)	J	Contig54	Nmar1348	COG0361	62	1e-11
Translation initiation factor 2 alpha subunit (eIF-2alpha)	J	Contig54	Nmar0077	COG1093	191	3e-50
Translation initiation factor 2 beta subunit (eIF-2beta)/eIF-5 N-terminal domain	J	Contig54	Nmar1412	COG1601	105	2e-24
Translation initiation factor 2B subunit eIF-2B alpha/beta/delta family	J	Contig54	Nmar0169	COG1184	178	3e-46
Translation initiation factor 2 (IF-2; GTPase)	J	Contig54	Nmar0072	COG0532	70	3e-13
Translation initiation factor 2 (IF-2; GTPase)	J	Contig54	Nmar0229	COG0532	359	1.0e-100
Translation initiation factor 2 (IF-2; GTPase)	J	Contig54	Nmar0673	COG0532	35	0.003
Translation initiation factor 2 (IF-2; GTPase)	J	Contig54	Nmar0748	COG0532	63	8e-11
Translation initiation factor 2 (IF-2; GTPase)	J	Contig54	Nmar0961	COG0532	35	0.006
Translation initiation factor 2 (IF-2; GTPase)	J	Contig54	Nmar1034	COG0532	53	4e-08
Translation initiation factor 2 (IF-2; GTPase)	J	Contig54	Nmar1605	COG0532	36	0.006
Translation initiation factor 6 (eIF-6)	J	Contig54	Nmar0237	COG1976	204	5e-54

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Translation initiation factor 2 gamma subunit (eIF-2gamma; GTPase)	J	Contig54	Nmar0072	COG5257	548	1.0e-157
Translation initiation factor 2 gamma subunit (eIF-2gamma; GTPase)	J	Contig54	Nmar0229	COG5257	54	2e-08
Translation initiation factor 2 gamma subunit (eIF-2gamma; GTPase)	J	Contig54	Nmar0748	COG5257	41	4e-04
Translation initiation factor 2 gamma subunit (eIF-2gamma; GTPase)	J	Contig54	Nmar1034	COG5257	78	8e-16
tRNA(1-methyladenosine) methyltransferase and related methyltransferase	J	Contig54	Nmar0057	COG2519	57	8e-10
tRNA(1-methyladenosine) methyltransferase and related methyltransferase	J	Contig54	Nmar0106	COG2519	39	3e-04
tRNA(1-methyladenosine) methyltransferase and related methyltransferase	J	Contig54	Nmar0690	COG2519	240	1e-64
tRNA(1-methyladenosine) methyltransferase and related methyltransferase	J	Contig54	Nmar0755	COG2519	35	0.004
tRNA(1-methyladenosine) methyltransferase and related methyltransferase	J	Contig54	Nmar1381	COG2519	36	0.003
tRNA(1-methyladenosine) methyltransferase and related methyltransferase	J	Contig54	Nmar1392	COG2519	36	0.002
tRNA(1-methyladenosine) methyltransferase and related methyltransferase	J	Contig54	Nmar1457	COG2519	63	4e-11
tRNA(1-methyladenosine) methyltransferase and related methyltransferase	J	Contig54	Nmar1722	COG2519	40	2e-04
tRNA and rRNA cytosine-C5-methylase	J	Contig54	Nmar0057	COG0144	36	0.002
tRNA and rRNA cytosine-C5-methylase	J	Contig54	Nmar0610	COG0144	42	1e-04
tRNA and rRNA cytosine-C5-methylase	J	Contig54	Nmar0690	COG0144	42	8e-05
tRNA-dihydrouridine synthase	J	Contig54	Nmar1390	COG0042	67	2e-12
tRNA-dihydrouridine synthase	J	Contig54	Nmar1525	COG0042	263	1e-71
tRNA-dihydrouridine synthase	J	Contig54	Nmar1552	COG0042	39	3e-04
tRNA nucleotidyltransferase (CCA-adding enzyme)	J	Contig54	Nmar1782	COG1746	313	1e-86
tRNA splicing endonuclease	J	Contig54	Nmar0450	COG1676	69	2e-13
tRNA splicing endonuclease	J	Contig54	Nmar1039	COG1676	122	2e-29
Truncated possibly inactive lysyl-tRNA synthetase (class II)	J	Contig54	Nmar0871	COG2269	76	4e-15
Truncated possibly inactive lysyl-tRNA synthetase (class II)	J	Contig54	Nmar1066	COG2269	79	6e-16

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