Cell Motility and Secretion

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Autotransporter protein or domain integral membrane beta-barrel involved in protein secretion	N	Contig28	Nham2974	COG5571	51	3e-07
Autotransporter protein or domain integral membrane beta-barrel involved in protein secretion	N	Contig28	Nham3087	COG5571	53	2e-07
Chemotaxis protein	N	Contig28	Nham3193	COG3143	42	4e-05
Chemotaxis protein histidine kinase and related kinase	N	Contig28	Nham0129	COG0643	44	5e-05
Chemotaxis protein histidine kinase and related kinase	N	Contig28	Nham0235	COG0643	38	0.003
Chemotaxis protein histidine kinase and related kinase	N	Contig28	Nham0349	COG0643	46	8e-06
Chemotaxis protein histidine kinase and related kinase	N	Contig28	Nham0442	COG0643	40	7e-04
Chemotaxis protein histidine kinase and related kinase	N	Contig28	Nham0634	COG0643	38	0.002
Chemotaxis protein histidine kinase and related kinase	N	Contig28	Nham0884	COG0643	42	1e-04
Chemotaxis protein histidine kinase and related kinase	N	Contig28	Nham1398	COG0643	49	1e-06
Chemotaxis protein histidine kinase and related kinase	N	Contig28	Nham1449	COG0643	37	0.005
Chemotaxis protein histidine kinase and related kinase	N	Contig28	Nham1661	COG0643	37	0.001
Chemotaxis protein histidine kinase and related kinase	N	Contig28	Nham1838	COG0643	40	6e-04
Chemotaxis protein histidine kinase and related kinase	N	Contig28	Nham1907	COG0643	41	1e-04
Chemotaxis protein histidine kinase and related kinase	N	Contig28	Nham2177	COG0643	39	0.001
Chemotaxis protein histidine kinase and related kinase	N	Contig28	Nham2190	COG0643	47	4e-06
Chemotaxis protein histidine kinase and related kinase	N	Contig28	Nham2623	COG0643	54	4e-08
Chemotaxis protein histidine kinase and related kinase	N	Contig28	Nham3295	COG0643	44	2e-05
Chemotaxis protein histidine kinase and related kinase	N	Contig28	Nham3375	COG0643	43	1e-05
Chemotaxis protein histidine kinase and related kinase	N	Contig28	Nham3376	COG0643	506	1.0e-144
Chemotaxis protein histidine kinase and related kinase	N	Contig28	Nham3485	COG0643	44	2e-05
Chemotaxis protein histidine kinase and related kinase	N	Contig28	Nham3488	COG0643	44	2e-05
Chemotaxis protein histidine kinase and related kinase	N	Contig28	Nham3684	COG0643	46	5e-06
Chemotaxis protein histidine kinase and related kinase	N	Contig28	Nham3685	COG0643	54	4e-08
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig25	Nham4605	COG2201	154	4e-38
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham0094	COG2201	53	2e-08
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham0235	COG2201	49	1e-06
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham0273	COG2201	40	1e-04
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham0443	COG2201	76	1e-15
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham0640	COG2201	52	3e-08
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham0665	COG2201	43	6e-06
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham0872	COG2201	40	1e-04
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham0998	COG2201	46	3e-06
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham1143	COG2201	38	2e-04
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham1224	COG2201	51	1e-07
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham1398	COG2201	46	1e-05
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham1433	COG2201	53	3e-08
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham1442	COG2201	39	2e-04
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham1662	COG2201	58	6e-10
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham1837	COG2201	50	4e-07
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham1839	COG2201	63	4e-11
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham1885	COG2201	51	6e-08
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham1906	COG2201	48	4e-07
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham2191	COG2201	42	1e-05
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham2192	COG2201	53	4e-08
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham2442	COG2201	72	1e-13
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham2443	COG2201	60	7e-11
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham2990	COG2201	60	1e-10
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham3137	COG2201	60	2e-10
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham3160	COG2201	45	2e-06
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham3293	COG2201	43	3e-05
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham3296	COG2201	45	5e-06
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham3371	COG2201	56	2e-09
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham3373	COG2201	274	7e-75
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham3374	COG2201	76	5e-16
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham3376	COG2201	53	1e-07
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham3570	COG2201	34	0.009
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham3683	COG2201	65	4e-12
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	N	Contig28	Nham3990	COG2201	155	7e-39
Chemotaxis signal transduction protein	N	Contig28	Nham3375	COG0835	95	2e-21
Chemotaxis signal transduction protein	N	Contig28	Nham3376	COG0835	41	3e-04
Flagellar basal body rod protein	N	Contig28	Nham1331	COG4787	44	4e-05
Flagellar basal body rod protein	N	Contig28	Nham1331	COG4786	87	4e-18
Flagellar basal body rod protein	N	Contig28	Nham1383	COG4787	116	2e-27
Flagellar basal body rod protein	N	Contig28	Nham1383	COG4786	267	5e-73
Flagellar basal body rod protein	N	Contig28	Nham1384	COG4787	128	3e-31
Flagellar basal body rod protein	N	Contig28	Nham1384	COG4786	183	1e-47
Flagellar basal body rod protein	N	Contig28	Nham1393	COG4786	40	8e-05
Flagellar biosynthesis regulator FlaF	N	Contig28	Nham1338	COG5442	48	2e-07
Flagellar biosynthesis regulator FlbT	N	Contig28	Nham1335	COG5443	65	2e-12
Flagellar hook-length control protein	N	Contig28	Nham0694	COG3144	54	3e-08

FLAGELLUM STRUCTURE AND BIOGENESIS

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Flagellar basal body-associated protein	N	Contig28	Nham1385	COG1580	75	4e-15
Flagellar basal body L-ring protein	N	Contig28	Nham1381	COG2063	192	2e-50
Flagellar basal body P-ring biosynthesis protein	N	Contig28	Nham1196	COG1261	36	0.006
Flagellar basal body P-ring biosynthesis protein	N	Contig28	Nham1382	COG1261	75	9e-15
Flagellar basal-body P-ring protein	N	Contig28	Nham1344	COG1706	396	1.0e-111
Flagellar basal body protein	N	Contig28	Nham1392	COG1815	73	7e-15
Flagellar basal body protein	N	Contig28	Nham1393	COG1815	50	7e-08
Flagellar basal body rod protein	N	Contig28	Nham1331	COG1558	40	6e-04
Flagellar basal body rod protein	N	Contig28	Nham1383	COG1558	46	2e-06
Flagellar basal body rod protein	N	Contig28	Nham1384	COG1558	40	2e-04
Flagellar basal body rod protein	N	Contig28	Nham1393	COG1558	135	1e-33
Flagellar biosynthesis pathway component FlhA	N	Contig28	Nham0331	COG1298	36	0.004
Flagellar biosynthesis pathway component FlhA	N	Contig28	Nham3367	COG1298	792	0.0
Flagellar biosynthesis pathway component FlhB	N	Contig28	Nham1397	COG1377	349	2e-97
Flagellar biosynthesis pathway component FlhB	N	Contig28	Nham1578	COG1377	87	3e-19
Flagellar biosynthesis pathway component FliP	N	Contig28	Nham1390	COG1338	272	2e-74
Flagellar biosynthesis pathway component FliQ	N	Contig28	Nham1395	COG1987	68	1e-13
Flagellar biosynthesis pathway component FliR	N	Contig28	Nham1396	COG1684	133	1e-32
Flagellar biosynthesis/type III secretory pathway ATPase	N	Contig28	Nham0108	COG1157	109	3e-25
Flagellar biosynthesis/type III secretory pathway ATPase	N	Contig28	Nham0529	COG1157	245	5e-66
Flagellar biosynthesis/type III secretory pathway ATPase	N	Contig28	Nham0532	COG1157	211	7e-56
Flagellar biosynthesis/type III secretory pathway ATPase	N	Contig28	Nham1207	COG1157	35	0.010
Flagellar biosynthesis/type III secretory pathway ATPase	N	Contig28	Nham3370	COG1157	549	1.0e-157
Flagellar biosynthesis/type III secretory pathway lipoprotein	N	Contig28	Nham0691	COG1766	364	1.0e-102
Flagellar biosynthesis/type III secretory pathway protein	N	Contig28	Nham0689	COG1317	48	6e-07
Flagellar GTP-binding protein	N	Contig28	Nham0402	COG1419	107	1e-24
Flagellar GTP-binding protein	N	Contig28	Nham0741	COG1419	38	0.002
Flagellar GTP-binding protein	N	Contig28	Nham1673	COG1419	35	0.005
Flagellar GTP-binding protein	N	Contig28	Nham3578	COG1419	90	4e-19
Flagellar hook-associated protein	N	Contig28	Nham1331	COG1256	39	8e-04
Flagellar hook-associated protein	N	Contig28	Nham1332	COG1256	185	6e-48
Flagellar hook-associated protein	N	Contig28	Nham1383	COG1256	39	3e-04
Flagellar hook-basal body protein	N	Contig28	Nham1394	COG1677	54	2e-09
Flagellar hook capping protein	N	Contig28	Nham0693	COG1843	84	1e-17
Flagellar hook protein FlgE	N	Contig28	Nham1331	COG1749	112	7e-26
Flagellar hook protein FlgE	N	Contig28	Nham1383	COG1749	98	6e-22
Flagellar hook protein FlgE	N	Contig28	Nham1384	COG1749	70	1e-13
Flagellar hook protein FlgE	N	Contig28	Nham1393	COG1749	41	4e-05
Flagellar motor component	N	Contig28	Nham0747	COG1291	39	5e-04
Flagellar motor component	N	Contig28	Nham1495	COG1291	169	2e-43
Flagellar motor component	N	Contig28	Nham3515	COG1291	37	9e-04
Flagellar motor component	N	Contig28	Nham3639	COG1291	39	4e-04
Flagellar motor protein	N	Contig28	Nham0236	COG1360	90	2e-19
Flagellar motor protein	N	Contig28	Nham0631	COG1360	86	6e-18
Flagellar motor protein	N	Contig28	Nham1496	COG1360	142	4e-35
Flagellar motor protein	N	Contig28	Nham3509	COG1360	62	3e-11
Flagellar motor protein	N	Contig28	Nham3542	COG1360	138	4e-34
Flagellar motor protein	N	Contig28	Nham3622	COG1360	64	4e-11
Flagellar motor switch protein	N	Contig28	Nham0688	COG1868	46	6e-07
Flagellar motor switch protein	N	Contig28	Nham0690	COG1536	258	4e-70
Flagellar motor switch protein	N	Contig28	Nham1386	COG1868	199	3e-52
Flagellar motor switch protein	N	Contig28	Nham2162	COG1868	41	2e-05
Flagellar motor switch/type III secretory pathway protein	N	Contig28	Nham0688	COG1886	87	5e-19
Flagellar motor switch/type III secretory pathway protein	N	Contig28	Nham1386	COG1886	40	3e-04
Flagellar motor switch/type III secretory pathway protein	N	Contig28	Nham2162	COG1886	54	2e-09
Flagellin and related hook-associated protein	N	Contig28	Nham1333	COG1344	41	3e-04
Flagellin and related hook-associated protein	N	Contig28	Nham1336	COG1344	47	5e-06
Flagellin and related hook-associated protein	N	Contig28	Nham1337	COG1344	52	1e-07
Predicted ATPase involved in biogenesis of flagella	N	Contig28	Nham1616	COG2874	35	0.007
Predicted ATPase involved in biogenesis of flagella	N	Contig28	Nham2031	COG2874	43	7e-05
Predicted ATPase involved in biogenesis of flagella	N	Contig28	Nham2291	COG2874	42	9e-05

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Flp pilus assembly protein TadC	N	Contig28	Nham0386	COG2064	117	1e-27
Flp pilus assembly protein TadC	N	Contig28	Nham0387	COG2064	56	4e-09
Methyl-accepting chemotaxis protein	N	Contig28	Nham0354	COG0840	82	5e-17
Methyl-accepting chemotaxis protein	N	Contig28	Nham0772	COG0840	105	1e-23
Methyl-accepting chemotaxis protein	N	Contig28	Nham1045	COG0840	132	1e-31
Methyl-accepting chemotaxis protein	N	Contig28	Nham1080	COG0840	125	2e-29
Methyl-accepting chemotaxis protein	N	Contig28	Nham1447	COG0840	48	2e-06
Methylase of chemotaxis methyl-accepting protein	N	Contig25	Nham4605	COG1352	233	4e-62
Methylase of chemotaxis methyl-accepting protein	N	Contig28	Nham3372	COG1352	256	1e-69
Methylase of chemotaxis methyl-accepting protein	N	Contig28	Nham3990	COG1352	175	5e-45
PPE-repeat protein	N	Contig28	Nham3622	COG5651	42	1e-04
Predicted periplasmic or secreted lipoprotein	N	Contig28	Nham0566	COG1724	80	4e-17
Protein required for attachment to host cells	N	Contig28	Nham1930	COG5622	95	2e-21
Rod binding protein	N	Contig28	Nham1343	COG3951	40	5e-05
Tfp pilus assembly protein ATPase PilU	N	Contig25	Nham4569	COG5008	55	5e-09
Tfp pilus assembly protein ATPase PilU	N	Contig26	Nham4437	COG5008	50	3e-07
Tfp pilus assembly protein ATPase PilU	N	Contig26	Nham4523	COG5008	37	0.004
Tfp pilus assembly protein ATPase PilU	N	Contig28	Nham0388	COG5008	64	2e-11
Tfp pilus assembly protein ATPase PilU	N	Contig28	Nham0741	COG5008	113	4e-26
Tfp pilus assembly protein FimT	N	Contig28	Nham0738	COG4970	54	5e-09
Tfp pilus assembly protein FimV	N	Contig28	Nham0031	COG3170	38	0.003
Tfp pilus assembly protein FimV	N	Contig28	Nham0725	COG3170	39	0.005
Tfp pilus assembly protein FimV	N	Contig28	Nham1389	COG3170	41	7e-04
Tfp pilus assembly protein major pilin PilA	N	Contig28	Nham0738	COG4969	34	0.005
Tfp pilus assembly protein major pilin PilA	N	Contig28	Nham0739	COG4969	39	2e-04
Tfp pilus assembly protein PilE	N	Contig28	Nham0737	COG4968	36	0.001
Tfp pilus assembly protein PilE	N	Contig28	Nham0738	COG4968	34	0.005
Tfp pilus assembly protein PilE	N	Contig28	Nham0739	COG4968	41	5e-05
Tfp pilus assembly protein PilF	N	Contig28	Nham0385	COG3063	37	0.001
Tfp pilus assembly protein PilF	N	Contig28	Nham1215	COG3063	43	2e-05
Tfp pilus assembly protein PilF	N	Contig28	Nham1574	COG3063	50	2e-07
Tfp pilus assembly protein PilF	N	Contig28	Nham3088	COG3063	40	4e-04
Tfp pilus assembly protein PilF	N	Contig28	Nham3217	COG3063	42	1e-04
Tfp pilus assembly protein PilN	N	Contig28	Nham0734	COG3166	43	2e-05
Tfp pilus assembly protein pilus retraction ATPase PilT	N	Contig25	Nham4569	COG2805	67	2e-12
Tfp pilus assembly protein pilus retraction ATPase PilT	N	Contig26	Nham4437	COG2805	57	2e-09
Tfp pilus assembly protein pilus retraction ATPase PilT	N	Contig28	Nham0388	COG2805	70	4e-13
Tfp pilus assembly protein pilus retraction ATPase PilT	N	Contig28	Nham0741	COG2805	184	2e-47
Tfp pilus assembly protein PilV	N	Contig28	Nham0737	COG4967	33	0.007
Tfp pilus assembly protein tip-associated adhesin PilY1	N	Contig28	Nham0584	COG3419	34	0.006
Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB	N	Contig25	Nham4569	COG2804	83	2e-17
Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB	N	Contig26	Nham4437	COG2804	73	2e-14
Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB	N	Contig28	Nham0090	COG2804	38	0.004
Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB	N	Contig28	Nham0388	COG2804	79	6e-16
Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB	N	Contig28	Nham0741	COG2804	481	1.0e-137
Type II secretory pathway component PulD	N	Contig28	Nham0391	COG1450	137	2e-33
Type II secretory pathway component PulD	N	Contig28	Nham0742	COG1450	196	4e-51
Type II secretory pathway component PulF	N	Contig28	Nham0740	COG1459	262	4e-71
Type II secretory pathway prepilin signal peptidase PulO and related peptidase	N	Contig28	Nham0731	COG1989	55	2e-09
Type II secretory pathway pseudopilin PulG	N	Contig28	Nham0736	COG2165	38	9e-04
Type II secretory pathway pseudopilin PulG	N	Contig28	Nham0737	COG2165	36	0.001
Type II secretory pathway pseudopilin PulG	N	Contig28	Nham0738	COG2165	45	2e-06
Type II secretory pathway pseudopilin PulG	N	Contig28	Nham0739	COG2165	72	3e-14
Type IV pili component	N	Contig28	Nham0390	COG5461	146	1e-36
Type IV secretory pathway TrbD protein	N	Contig25	Nham4567	COG5268	93	5e-21
Type IV secretory pathway VirB11 protein involved in flagella biosynthesis	N	Contig25	Nham4569	COG0630	163	2e-41
Type IV secretory pathway VirB11 protein involved in flagella biosynthesis	N	Contig26	Nham4437	COG0630	227	7e-61
Type IV secretory pathway VirB11 protein involved in flagella biosynthesis	N	Contig28	Nham0388	COG0630	216	2e-57
Type IV secretory pathway VirB11 protein involved in flagella biosynthesis	N	Contig28	Nham0741	COG0630	84	4e-17
Type IV secretory pathway VirB11 protein involved in flagella biosynthesis	N	Contig28	Nham1534	COG0630	41	3e-04

SiteMap Feedback Life Sciences Division ORNL Disclaimer Webmaster