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Transcription

COG Name Group Contig Gene COG ID Score Evalue
AraC-type DNA-binding domain-containing protein K Contig28 Nham0160 COG2207 72 7e-14
AraC-type DNA-binding domain-containing protein K Contig28 Nham2823 COG2207 78 1e-15
AraC-type DNA-binding domain-containing protein K Contig28 Nham2987 COG2207 58 1e-09

BASAL TRANSCRIPTION FACTORS

COG Name Group Contig Gene COG ID Score Evalue
Predicted transcription factor homolog of eukaryotic MBF1 K Contig28 Nham0207 COG1813 32 0.008
Predicted transcription factor homolog of eukaryotic MBF1 K Contig28 Nham1096 COG1813 39 8e-04
Transcription antiterminator K Contig28 Nham1526 COG0250 194 3e-51
Transcription antiterminator K Contig28 Nham2398 COG0250 77 9e-16
Transcription antiterminator K Contig28 Nham3343 COG0250 41 2e-05
Transcription elongation factor K Contig28 Nham0029 COG0195 197 2e-51
Transcription elongation factor K Contig28 Nham2876 COG0782 150 3e-38
Transcription elongation factor K Contig28 Nham3421 COG0782 82 2e-17
Transcription termination factor K Contig28 Nham0108 COG1158 712 0.0
Transcription termination factor K Contig28 Nham0529 COG1158 58 1e-09
Transcription termination factor K Contig28 Nham1819 COG0781 119 1e-28
Transcription termination factor K Contig28 Nham3370 COG1158 86 7e-18
COG Name Group Contig Gene COG ID Score Evalue
Biotin operon repressor K Contig28 Nham0459 COG1654 35 0.004
Cold shock protein K Contig28 Nham0367 COG1278 98 9e-23
Cold shock protein K Contig28 Nham0398 COG1278 98 1e-22
Cold shock protein K Contig28 Nham0810 COG1278 97 3e-22
Cold shock protein K Contig28 Nham1169 COG1278 41 2e-05
Cold shock protein K Contig28 Nham2034 COG1278 96 5e-22
Cold shock protein K Contig28 Nham2120 COG1278 96 6e-22
Cold shock protein K Contig28 Nham2142 COG1278 81 5e-17
Cold shock protein K Contig28 Nham2147 COG1278 66 6e-13
Cold shock protein K Contig28 Nham2533 COG1278 94 1e-21
Cold shock protein K Contig28 Nham2750 COG1278 92 8e-21
Cold shock protein K Contig28 Nham2846 COG1278 100 2e-23
Cold shock protein K Contig28 Nham3148 COG1278 90 3e-20
Cold shock protein K Contig28 Nham3396 COG1278 96 5e-22
Cold shock protein K Contig28 Nham3436 COG1278 92 9e-21
DNA-binding HTH domain-containing protein K Contig25 Nham4558 COG2771 52 5e-08
DNA-binding HTH domain-containing protein K Contig26 Nham4396 COG2771 60 1e-10
DNA-binding HTH domain-containing protein K Contig26 Nham4435 COG2771 63 2e-11
DNA-binding HTH domain-containing protein K Contig28 Nham0273 COG2771 60 1e-10
DNA-binding HTH domain-containing protein K Contig28 Nham0872 COG2771 57 9e-10
DNA-binding HTH domain-containing protein K Contig28 Nham1032 COG2771 65 3e-12
DNA-binding HTH domain-containing protein K Contig28 Nham1881 COG2771 55 4e-09
DNA-binding HTH domain-containing protein K Contig28 Nham1906 COG2771 56 2e-09
DNA-binding HTH domain-containing protein K Contig28 Nham2943 COG2771 55 1e-08
DNA-binding HTH domain-containing protein K Contig28 Nham3000 COG2771 58 5e-10
DNA-binding winged-HTH domains K Contig28 Nham0094 COG3710 58 7e-10
DNA-binding winged-HTH domains K Contig28 Nham0443 COG3710 61 7e-11
DNA-binding winged-HTH domains K Contig28 Nham0640 COG3710 79 3e-16
DNA-binding winged-HTH domains K Contig28 Nham0998 COG3710 48 6e-07
DNA-binding winged-HTH domains K Contig28 Nham1032 COG3710 35 0.006
DNA-binding winged-HTH domains K Contig28 Nham1433 COG3710 56 3e-09
DNA-binding winged-HTH domains K Contig28 Nham1442 COG3710 60 1e-10
DNA-binding winged-HTH domains K Contig28 Nham1885 COG3710 52 4e-08
DNA-binding winged-HTH domains K Contig28 Nham2990 COG3710 62 4e-11
DNA-binding winged-HTH domains K Contig28 Nham3088 COG3710 78 1e-15
DNA-binding winged-HTH domains K Contig28 Nham3137 COG3710 63 3e-11
DNA-binding winged-HTH domains K Contig28 Nham3293 COG3710 42 3e-05
DNA-binding winged-HTH domains K Contig28 Nham3296 COG3710 52 4e-08
DNA-binding winged-HTH domains K Contig28 Nham3371 COG3710 52 4e-08
DNA-binding winged-HTH domains K Contig28 Nham3683 COG3710 41 9e-05

DNA-DEPENDENT RNA POLYMERASE SUBUNITS

COG Name Group Contig Gene COG ID Score Evalue
DNA-directed RNA polymerase alpha subunit/40 kD subunit K Contig28 Nham1569 COG0202 344 4e-96
DNA-directed RNA polymerase beta subunit/140 kD subunit K Contig28 Nham1531 COG0085 783 0.0
DNA-directed RNA polymerase beta' subunit/160 kD subunit K Contig28 Nham1532 COG0086 886 0.0
DNA-directed RNA polymerase sigma subunit (sigma70/sigma32) K Contig28 Nham2860 COG0568 257 9e-70
DNA-directed RNA polymerase sigma subunit (sigma70/sigma32) K Contig28 Nham2866 COG0568 354 1e-98
DNA-directed RNA polymerase specialized sigma subunit K Contig25 Nham4645 COG1191 34 0.008
DNA-directed RNA polymerase specialized sigma subunit K Contig28 Nham2659 COG1191 41 4e-05
DNA-directed RNA polymerase specialized sigma subunit K Contig28 Nham2674 COG1191 34 0.009
DNA-directed RNA polymerase specialized sigma subunit K Contig28 Nham2860 COG1191 88 8e-19
DNA-directed RNA polymerase specialized sigma subunit K Contig28 Nham2866 COG1191 126 4e-30
DNA-directed RNA polymerase specialized sigma subunit K Contig28 Nham3681 COG1191 45 4e-06
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K Contig25 Nham4645 COG1595 98 6e-22
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K Contig26 Nham4361 COG1595 84 4e-18
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K Contig26 Nham4408 COG1595 91 5e-20
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K Contig28 Nham0213 COG1595 112 3e-26
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K Contig28 Nham0273 COG1595 36 0.003
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K Contig28 Nham0872 COG1595 38 6e-04
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K Contig28 Nham1371 COG1595 34 0.007
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K Contig28 Nham2659 COG1595 117 7e-28
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K Contig28 Nham2674 COG1595 104 5e-24
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K Contig28 Nham3570 COG1595 44 8e-06
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K Contig28 Nham3572 COG1595 127 4e-31
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K Contig28 Nham3681 COG1595 110 6e-26
DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog K Contig28 Nham0173 COG1508 457 1.0e-129
DNA-directed RNA polymerase subunit E' K Contig28 Nham0035 COG1095 51 3e-07
DNA-directed RNA polymerase subunit E' K Contig28 Nham0163 COG1095 44 4e-05
DNA-directed RNA polymerase subunit E' K Contig28 Nham1037 COG1095 40 6e-04
DNA-directed RNA polymerase subunit E' K Contig28 Nham2438 COG1095 44 6e-05
DNA-directed RNA polymerase subunit K/omega K Contig28 Nham2256 COG1758 65 2e-12
COG Name Group Contig Gene COG ID Score Evalue
DNA helicase TIP49 TBP-interacting protein K Contig28 Nham0462 COG1224 37 0.004
DNA helicase TIP49 TBP-interacting protein K Contig28 Nham1573 COG1224 36 0.006
DNA helicase TIP49 TBP-interacting protein K Contig28 Nham2228 COG1224 36 0.007
DNA helicase TIP49 TBP-interacting protein K Contig28 Nham2416 COG1224 37 0.005
DNA helicase TIP49 TBP-interacting protein K Contig28 Nham3506 COG1224 49 1e-06
DNA helicase TIP49 TBP-interacting protein K Contig28 Nham3521 COG1224 49 5e-07
DNA methylase K Contig25 Nham4656 COG4646 775 0.0
DNA methylase K Contig26 Nham4476 COG4646 724 0.0
DNA or RNA helicase of superfamily II K Contig26 Nham4464 COG1061 43 2e-04
DNA or RNA helicase of superfamily II K Contig26 Nham4500 COG1061 63 7e-11
DNA or RNA helicase of superfamily II K Contig27 Nham4213 COG1061 40 2e-04
DNA or RNA helicase of superfamily II K Contig28 Nham0240 COG1061 59 1e-09
DNA or RNA helicase of superfamily II K Contig28 Nham0400 COG1061 69 6e-13
DNA or RNA helicase of superfamily II K Contig28 Nham0455 COG1061 47 6e-06
DNA or RNA helicase of superfamily II K Contig28 Nham0504 COG1061 44 9e-05
DNA or RNA helicase of superfamily II K Contig28 Nham0535 COG1061 43 7e-05
DNA or RNA helicase of superfamily II K Contig28 Nham0580 COG1061 40 0.001
DNA or RNA helicase of superfamily II K Contig28 Nham1150 COG1061 47 5e-06
DNA or RNA helicase of superfamily II K Contig28 Nham1352 COG1061 53 1e-07
DNA or RNA helicase of superfamily II K Contig28 Nham1985 COG1061 96 2e-20
DNA or RNA helicase of superfamily II K Contig28 Nham2002 COG1061 73 6e-14
DNA or RNA helicase of superfamily II K Contig28 Nham2053 COG1061 68 3e-12
DNA or RNA helicase of superfamily II K Contig28 Nham2055 COG1061 64 3e-11
DNA or RNA helicase of superfamily II K Contig28 Nham2321 COG1061 89 8e-19
DNA or RNA helicase of superfamily II K Contig28 Nham2839 COG1061 57 7e-09
DNA or RNA helicase of superfamily II K Contig28 Nham2923 COG1061 55 3e-08
DNA or RNA helicase of superfamily II K Contig28 Nham3439 COG1061 55 1e-08
DNA or RNA helicase of superfamily II K Contig28 Nham3708 COG1061 115 4e-27
DNA or RNA helicase of superfamily II K Contig28 Nham3709 COG1061 57 9e-09
dsRNA-specific ribonuclease K Contig28 Nham2251 COG0571 220 6e-59
Exoribonuclease II K Contig28 Nham2438 COG4776 205 7e-54
Exoribonuclease R K Contig28 Nham0035 COG0557 45 2e-05
Exoribonuclease R K Contig28 Nham0163 COG0557 43 7e-05
Exoribonuclease R K Contig28 Nham1037 COG0557 41 3e-04
Exoribonuclease R K Contig28 Nham2438 COG0557 574 1.0e-165
Factor for inversion stimulation Fis transcriptional activator K Contig28 Nham0687 COG2901 44 3e-05
Factor for inversion stimulation Fis transcriptional activator K Contig28 Nham1837 COG2901 71 2e-13
Factor for inversion stimulation Fis transcriptional activator K Contig28 Nham2901 COG2901 38 2e-04
Guanosine polyphosphate pyrophosphohydrolase/synthetase K Contig28 Nham2255 COG0317 771 0.0
Histone acetyltransferase K Contig28 Nham0149 COG1243 47 3e-06
NAD-dependent protein deacetylase SIR2 family K Contig28 Nham2722 COG0846 36 0.007
Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase K Contig28 Nham1051 COG0378 37 0.005
Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase K Contig28 Nham2640 COG0378 40 3e-04
Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase K Contig28 Nham3131 COG0378 38 6e-04
Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase K Contig28 Nham3425 COG0378 40 3e-04
Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase K Contig28 Nham3468 COG0378 44 2e-05
Phage shock protein A (IM30) suppresses sigma54-dependent transcription K Contig28 Nham3542 COG1842 35 0.008
Phenylacetic acid-responsive transcriptional repressor K Contig26 Nham4425 COG3327 33 0.010
Predicted nucleic-acid-binding protein implicated in transcription termination K Contig28 Nham0030 COG2740 77 9e-16
Predicted RNA polymerase sigma factor containing a TPR repeat domain K Contig25 Nham4645 COG4941 40 9e-05
Predicted RNA polymerase sigma factor containing a TPR repeat domain K Contig28 Nham2659 COG4941 41 6e-05
Predicted RNA polymerase sigma factor containing a TPR repeat domain K Contig28 Nham2674 COG4941 38 5e-04
Predicted RNA polymerase sigma factor containing a TPR repeat domain K Contig28 Nham3572 COG4941 38 5e-04
Predicted RNA polymerase sigma factor containing a TPR repeat domain K Contig28 Nham3681 COG4941 38 5e-04
Predicted transcriptional regulator BolA superfamily protein K Contig28 Nham0495 COG5007 51 1e-08
Predicted transcriptional regulator BolA superfamily protein K Contig28 Nham1637 COG5007 64 2e-12
Predicted transcriptional regulator protein containing CBS domains K Contig26 Nham4373 COG4109 34 0.004
Predicted transcriptional regulator protein containing CBS domains K Contig28 Nham1649 COG4109 40 8e-05
Predicted transcriptional regulator protein containing CBS domains K Contig28 Nham1897 COG4109 36 0.003
Predicted transcriptional regulator protein containing CBS domains K Contig28 Nham1902 COG4109 47 1e-06
Predicted transcriptional regulator protein containing CBS domains K Contig28 Nham1912 COG4109 44 7e-06
Predicted transcriptional regulator protein containing CBS domains K Contig28 Nham1918 COG4109 52 2e-08
Predicted transcriptional regulator protein containing CBS domains K Contig28 Nham1933 COG4109 44 8e-06
Predicted transcriptional regulator protein containing CBS domains K Contig28 Nham1947 COG4109 41 7e-05
Predicted transcriptional regulator protein containing CBS domains K Contig28 Nham2540 COG4109 34 0.004
Predicted transcriptional regulator protein containing CBS domains K Contig28 Nham2546 COG4109 44 2e-05
Predicted transcriptional regulator protein containing CBS domains K Contig28 Nham3413 COG4109 37 0.002
Predicted transcriptional regulator protein containing CBS domains K Contig28 Nham3524 COG4109 40 3e-04
Predicted transcriptional regulator protein K Contig26 Nham4425 COG4189 47 5e-07
Predicted transcriptional regulator protein K Contig26 Nham4431 COG4189 48 8e-07
Predicted transcriptional regulator protein K Contig26 Nham4432 COG4189 48 2e-07
Predicted transcriptional regulator protein K Contig28 Nham0774 COG4189 38 2e-04
Predicted transcriptional regulator protein K Contig28 Nham0944 COG4742 35 0.002
Predicted transcriptional regulator protein K Contig28 Nham2246 COG4189 48 2e-07
Predicted transcriptional regulator protein K Contig28 Nham2627 COG4957 190 3e-50
Predicted transcriptional regulator protein K Contig28 Nham3666 COG4189 37 8e-04
Predicted transmembrane transcriptional regulator (anti-sigma factor) K Contig28 Nham2675 COG5662 107 1e-24
Rad3-related DNA helicase K Contig28 Nham1993 COG1199 60 6e-10
RecG-like helicase K Contig26 Nham4476 COG1200 42 4e-04
RecG-like helicase K Contig27 Nham4213 COG1200 43 3e-05
RecG-like helicase K Contig28 Nham0240 COG1200 37 0.008
RecG-like helicase K Contig28 Nham0400 COG1200 42 9e-05
RecG-like helicase K Contig28 Nham0535 COG1200 60 5e-10
RecG-like helicase K Contig28 Nham2053 COG1200 324 2e-89
RecG-like helicase K Contig28 Nham2055 COG1200 769 0.0
RecG-like helicase K Contig28 Nham2321 COG1200 55 1e-08
RecG-like helicase K Contig28 Nham2704 COG1200 36 0.006
RecG-like helicase K Contig28 Nham2923 COG1200 45 3e-05
RecG-like helicase K Contig28 Nham3439 COG1200 45 2e-05
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham0094 COG4567 56 2e-09
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham0231 COG4567 240 4e-65
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham0235 COG4567 45 2e-05
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham0273 COG4567 36 0.002
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham0349 COG4567 50 7e-07
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham0443 COG4567 58 5e-10
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham0640 COG4567 60 2e-10
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham0646 COG4567 38 3e-04
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham0665 COG4567 40 8e-05
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham0872 COG4567 63 1e-11
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham0873 COG4567 53 5e-09
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham0998 COG4567 60 1e-10
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham1143 COG4567 47 3e-07
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham1224 COG4567 51 2e-07
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham1398 COG4567 46 1e-05
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham1433 COG4567 66 2e-12
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham1442 COG4567 57 9e-10
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham1662 COG4567 41 6e-05
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham1793 COG4567 33 0.009
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham1837 COG4567 63 3e-11
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham1839 COG4567 73 4e-14
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham1885 COG4567 67 8e-13
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham1905 COG4567 50 4e-08
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham1906 COG4567 58 4e-10
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham2192 COG4567 61 1e-10
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham2442 COG4567 42 9e-05
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham2443 COG4567 49 9e-08
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham2990 COG4567 65 4e-12
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham3137 COG4567 55 4e-09
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham3160 COG4567 48 2e-07
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham3293 COG4567 62 5e-11
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham3296 COG4567 69 3e-13
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham3371 COG4567 65 5e-12
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham3373 COG4567 38 0.001
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham3374 COG4567 50 6e-08
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham3376 COG4567 49 1e-06
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham3488 COG4567 37 0.003
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig28 Nham3683 COG4567 63 2e-11
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham0094 COG3437 78 7e-16
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham0129 COG3437 68 2e-12
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham0231 COG3437 65 5e-12
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham0235 COG3437 65 2e-11
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham0273 COG3437 49 3e-07
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham0349 COG3437 55 1e-08
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham0443 COG3437 86 3e-18
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham0640 COG3437 100 2e-22
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham0646 COG3437 40 6e-05
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham0665 COG3437 67 4e-13
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham0872 COG3437 76 1e-15
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham0873 COG3437 62 1e-11
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham0998 COG3437 83 2e-17
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham1143 COG3437 62 9e-12
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham1224 COG3437 66 7e-12
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham1398 COG3437 75 2e-14
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham1433 COG3437 88 5e-19
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham1442 COG3437 63 2e-11
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham1662 COG3437 67 7e-13
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham1793 COG3437 47 4e-07
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham1837 COG3437 68 1e-12
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham1839 COG3437 70 2e-13
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham1885 COG3437 84 7e-18
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham1905 COG3437 73 7e-15
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham1906 COG3437 72 3e-14
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham2191 COG3437 60 7e-11
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham2192 COG3437 57 2e-09
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham2442 COG3437 111 1e-25
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham2443 COG3437 72 9e-15
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham2990 COG3437 75 5e-15
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham3137 COG3437 83 2e-17
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham3160 COG3437 66 9e-13
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham3293 COG3437 68 4e-13
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham3296 COG3437 67 1e-12
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham3371 COG3437 82 3e-17
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham3373 COG3437 59 5e-10
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham3374 COG3437 85 2e-18
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham3376 COG3437 66 2e-11
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham3485 COG3437 64 2e-11
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham3488 COG3437 69 9e-13
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham3570 COG3437 36 0.003
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham3683 COG3437 87 1e-18
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig28 Nham4035 COG3437 131 8e-32
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig25 Nham4558 COG2197 49 3e-07
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig26 Nham4396 COG2197 51 5e-08
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig26 Nham4435 COG2197 54 8e-09
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig27 Nham4155 COG2197 38 1e-04
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham0094 COG2197 90 2e-19
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham0129 COG2197 63 8e-11
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham0231 COG2197 69 2e-13
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham0235 COG2197 67 6e-12
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham0273 COG2197 170 6e-44
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham0274 COG2197 37 0.007
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham0349 COG2197 50 8e-07
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham0443 COG2197 89 3e-19
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham0640 COG2197 80 2e-16
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham0646 COG2197 38 3e-04
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham0665 COG2197 58 2e-10
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham0687 COG2197 42 7e-05
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham0872 COG2197 122 2e-29
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham0873 COG2197 61 2e-11
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham0998 COG2197 82 3e-17
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham1032 COG2197 88 4e-19
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham1143 COG2197 57 3e-10
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham1224 COG2197 71 2e-13
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham1398 COG2197 62 2e-10
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham1433 COG2197 79 3e-16
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham1442 COG2197 70 2e-13
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham1662 COG2197 70 1e-13
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham1793 COG2197 40 6e-05
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham1837 COG2197 70 4e-13
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham1839 COG2197 63 3e-11
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham1881 COG2197 73 1e-14
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham1885 COG2197 79 3e-16
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham1905 COG2197 53 8e-09
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham1906 COG2197 118 3e-28
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham2191 COG2197 62 3e-11
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham2192 COG2197 65 8e-12
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham2442 COG2197 79 8e-16
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham2443 COG2197 71 3e-14
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham2943 COG2197 126 2e-30
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham2990 COG2197 74 8e-15
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham3000 COG2197 113 2e-26
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham3137 COG2197 83 1e-17
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham3160 COG2197 68 2e-13
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham3293 COG2197 77 9e-16
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham3296 COG2197 71 7e-14
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham3371 COG2197 82 5e-17
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham3373 COG2197 80 2e-16
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham3374 COG2197 75 1e-15
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham3376 COG2197 63 8e-11
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham3485 COG2197 60 5e-10
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham3488 COG2197 53 6e-08
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham3570 COG2197 34 0.010
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig28 Nham3683 COG2197 72 5e-14
Response regulator of citrate/malate metabolism K Contig27 Nham4155 COG4565 36 8e-04
Response regulator of citrate/malate metabolism K Contig28 Nham0094 COG4565 66 3e-12
Response regulator of citrate/malate metabolism K Contig28 Nham0129 COG4565 43 7e-05
Response regulator of citrate/malate metabolism K Contig28 Nham0231 COG4565 68 5e-13
Response regulator of citrate/malate metabolism K Contig28 Nham0235 COG4565 48 3e-06
Response regulator of citrate/malate metabolism K Contig28 Nham0273 COG4565 58 7e-10
Response regulator of citrate/malate metabolism K Contig28 Nham0274 COG4565 37 0.006
Response regulator of citrate/malate metabolism K Contig28 Nham0349 COG4565 67 5e-12
Response regulator of citrate/malate metabolism K Contig28 Nham0443 COG4565 51 6e-08
Response regulator of citrate/malate metabolism K Contig28 Nham0640 COG4565 61 5e-11
Response regulator of citrate/malate metabolism K Contig28 Nham0646 COG4565 47 6e-07
Response regulator of citrate/malate metabolism K Contig28 Nham0665 COG4565 41 3e-05
Response regulator of citrate/malate metabolism K Contig28 Nham0872 COG4565 66 2e-12
Response regulator of citrate/malate metabolism K Contig28 Nham0873 COG4565 43 1e-05
Response regulator of citrate/malate metabolism K Contig28 Nham0998 COG4565 59 2e-10
Response regulator of citrate/malate metabolism K Contig28 Nham1143 COG4565 43 6e-06
Response regulator of citrate/malate metabolism K Contig28 Nham1224 COG4565 62 9e-11
Response regulator of citrate/malate metabolism K Contig28 Nham1398 COG4565 51 3e-07
Response regulator of citrate/malate metabolism K Contig28 Nham1433 COG4565 60 2e-10
Response regulator of citrate/malate metabolism K Contig28 Nham1442 COG4565 56 2e-09
Response regulator of citrate/malate metabolism K Contig28 Nham1662 COG4565 49 2e-07
Response regulator of citrate/malate metabolism K Contig28 Nham1793 COG4565 34 0.003
Response regulator of citrate/malate metabolism K Contig28 Nham1837 COG4565 51 1e-07
Response regulator of citrate/malate metabolism K Contig28 Nham1839 COG4565 64 2e-11
Response regulator of citrate/malate metabolism K Contig28 Nham1885 COG4565 66 3e-12
Response regulator of citrate/malate metabolism K Contig28 Nham1905 COG4565 40 6e-05
Response regulator of citrate/malate metabolism K Contig28 Nham1906 COG4565 53 2e-08
Response regulator of citrate/malate metabolism K Contig28 Nham2191 COG4565 48 2e-07
Response regulator of citrate/malate metabolism K Contig28 Nham2192 COG4565 69 5e-13
Response regulator of citrate/malate metabolism K Contig28 Nham2442 COG4565 55 9e-09
Response regulator of citrate/malate metabolism K Contig28 Nham2443 COG4565 62 1e-11
Response regulator of citrate/malate metabolism K Contig28 Nham2990 COG4565 58 7e-10
Response regulator of citrate/malate metabolism K Contig28 Nham3137 COG4565 67 1e-12
Response regulator of citrate/malate metabolism K Contig28 Nham3160 COG4565 59 1e-10
Response regulator of citrate/malate metabolism K Contig28 Nham3293 COG4565 67 9e-13
Response regulator of citrate/malate metabolism K Contig28 Nham3296 COG4565 74 7e-15
Response regulator of citrate/malate metabolism K Contig28 Nham3371 COG4565 69 3e-13
Response regulator of citrate/malate metabolism K Contig28 Nham3373 COG4565 61 2e-10
Response regulator of citrate/malate metabolism K Contig28 Nham3374 COG4565 67 5e-13
Response regulator of citrate/malate metabolism K Contig28 Nham3376 COG4565 42 2e-04
Response regulator of citrate/malate metabolism K Contig28 Nham3485 COG4565 39 7e-04
Response regulator of citrate/malate metabolism K Contig28 Nham3488 COG4565 57 3e-09
Response regulator of citrate/malate metabolism K Contig28 Nham3570 COG4565 44 9e-06
Response regulator of citrate/malate metabolism K Contig28 Nham3683 COG4565 64 1e-11
Response regulator of the LytR/AlgR family K Contig27 Nham4155 COG3279 35 0.002
Response regulator of the LytR/AlgR family K Contig28 Nham0094 COG3279 62 3e-11
Response regulator of the LytR/AlgR family K Contig28 Nham0129 COG3279 48 2e-06
Response regulator of the LytR/AlgR family K Contig28 Nham0231 COG3279 50 2e-07
Response regulator of the LytR/AlgR family K Contig28 Nham0235 COG3279 61 3e-10
Response regulator of the LytR/AlgR family K Contig28 Nham0273 COG3279 46 3e-06
Response regulator of the LytR/AlgR family K Contig28 Nham0349 COG3279 42 2e-04
Response regulator of the LytR/AlgR family K Contig28 Nham0443 COG3279 64 1e-11
Response regulator of the LytR/AlgR family K Contig28 Nham0640 COG3279 53 2e-08
Response regulator of the LytR/AlgR family K Contig28 Nham0646 COG3279 46 1e-06
Response regulator of the LytR/AlgR family K Contig28 Nham0665 COG3279 47 4e-07
Response regulator of the LytR/AlgR family K Contig28 Nham0872 COG3279 51 8e-08
Response regulator of the LytR/AlgR family K Contig28 Nham0873 COG3279 44 4e-06
Response regulator of the LytR/AlgR family K Contig28 Nham0998 COG3279 47 1e-06
Response regulator of the LytR/AlgR family K Contig28 Nham1143 COG3279 50 4e-08
Response regulator of the LytR/AlgR family K Contig28 Nham1224 COG3279 55 1e-08
Response regulator of the LytR/AlgR family K Contig28 Nham1398 COG3279 62 3e-10
Response regulator of the LytR/AlgR family K Contig28 Nham1433 COG3279 53 1e-08
Response regulator of the LytR/AlgR family K Contig28 Nham1442 COG3279 45 4e-06
Response regulator of the LytR/AlgR family K Contig28 Nham1662 COG3279 51 4e-08
Response regulator of the LytR/AlgR family K Contig28 Nham1793 COG3279 34 0.003
Response regulator of the LytR/AlgR family K Contig28 Nham1837 COG3279 56 5e-09
Response regulator of the LytR/AlgR family K Contig28 Nham1839 COG3279 56 6e-09
Response regulator of the LytR/AlgR family K Contig28 Nham1885 COG3279 54 1e-08
Response regulator of the LytR/AlgR family K Contig28 Nham1905 COG3279 51 2e-08
Response regulator of the LytR/AlgR family K Contig28 Nham1906 COG3279 66 1e-12
Response regulator of the LytR/AlgR family K Contig28 Nham2191 COG3279 39 1e-04
Response regulator of the LytR/AlgR family K Contig28 Nham2192 COG3279 51 1e-07
Response regulator of the LytR/AlgR family K Contig28 Nham2442 COG3279 61 2e-10
Response regulator of the LytR/AlgR family K Contig28 Nham2443 COG3279 47 3e-07
Response regulator of the LytR/AlgR family K Contig28 Nham2990 COG3279 43 2e-05
Response regulator of the LytR/AlgR family K Contig28 Nham3137 COG3279 52 5e-08
Response regulator of the LytR/AlgR family K Contig28 Nham3160 COG3279 41 2e-05
Response regulator of the LytR/AlgR family K Contig28 Nham3293 COG3279 55 5e-09
Response regulator of the LytR/AlgR family K Contig28 Nham3296 COG3279 50 2e-07
Response regulator of the LytR/AlgR family K Contig28 Nham3371 COG3279 51 6e-08
Response regulator of the LytR/AlgR family K Contig28 Nham3373 COG3279 58 1e-09
Response regulator of the LytR/AlgR family K Contig28 Nham3374 COG3279 59 1e-10
Response regulator of the LytR/AlgR family K Contig28 Nham3485 COG3279 57 3e-09
Response regulator of the LytR/AlgR family K Contig28 Nham3488 COG3279 51 2e-07
Response regulator of the LytR/AlgR family K Contig28 Nham3570 COG3279 40 1e-04
Response regulator of the LytR/AlgR family K Contig28 Nham3683 COG3279 47 1e-06
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig27 Nham4155 COG0745 43 6e-06
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham0094 COG0745 185 3e-48
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham0129 COG0745 86 8e-18
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham0231 COG0745 70 9e-14
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham0235 COG0745 77 7e-15
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham0273 COG0745 69 3e-13
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham0274 COG0745 51 6e-07
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham0349 COG0745 60 6e-10
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham0443 COG0745 209 2e-55
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham0640 COG0745 237 4e-64
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham0646 COG0745 46 1e-06
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham0665 COG0745 74 3e-15
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham0687 COG0745 38 0.002
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham0872 COG0745 75 3e-15
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham0873 COG0745 72 1e-14
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham0998 COG0745 197 5e-52
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham1143 COG0745 64 3e-12
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham1224 COG0745 81 2e-16
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham1398 COG0745 77 4e-15
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham1433 COG0745 224 5e-60
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham1442 COG0745 214 6e-57
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham1662 COG0745 78 2e-16
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham1793 COG0745 41 3e-05
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham1837 COG0745 85 1e-17
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham1839 COG0745 82 9e-17
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham1885 COG0745 206 1e-54
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham1905 COG0745 70 7e-14
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham1906 COG0745 83 2e-17
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham2191 COG0745 63 6e-12
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham2192 COG0745 78 7e-16
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham2442 COG0745 113 2e-26
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham2443 COG0745 73 4e-15
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham2933 COG0745 43 5e-05
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham2990 COG0745 202 2e-53
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham3088 COG0745 59 7e-10
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham3137 COG0745 187 5e-49
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham3160 COG0745 74 3e-15
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham3293 COG0745 194 4e-51
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham3296 COG0745 190 5e-50
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham3371 COG0745 209 1e-55
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham3373 COG0745 69 4e-13
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham3374 COG0745 83 8e-18
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham3376 COG0745 80 6e-16
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham3485 COG0745 77 4e-15
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham3488 COG0745 60 4e-10
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham3683 COG0745 192 2e-50
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham3684 COG0745 39 0.001
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig28 Nham4035 COG0745 39 7e-04
Serine/threonine protein kinase K Contig28 Nham1803 COG0515 38 8e-04
Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain K Contig27 Nham4344 COG4650 45 4e-06
Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain K Contig28 Nham0687 COG4650 141 9e-35
Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain K Contig28 Nham1224 COG4650 142 4e-35
Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain K Contig28 Nham1837 COG4650 137 2e-33
Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain K Contig28 Nham1839 COG4650 122 6e-29
Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain K Contig28 Nham1979 COG4650 37 0.004
SOS-response transcriptional repressors (RecA-mediated autopeptidase) K Contig28 Nham0557 COG1974 58 5e-10
SOS-response transcriptional repressors (RecA-mediated autopeptidase) K Contig28 Nham1729 COG1974 201 4e-53
Superfamily II DNA and RNA helicase K Contig26 Nham4464 COG0513 52 2e-07
Superfamily II DNA and RNA helicase K Contig27 Nham4213 COG0513 248 6e-67
Superfamily II DNA and RNA helicase K Contig28 Nham0240 COG0513 112 1e-25
Superfamily II DNA and RNA helicase K Contig28 Nham0400 COG0513 394 1.0e-110
Superfamily II DNA and RNA helicase K Contig28 Nham0455 COG0513 42 1e-04
Superfamily II DNA and RNA helicase K Contig28 Nham0504 COG0513 70 1e-12
Superfamily II DNA and RNA helicase K Contig28 Nham0580 COG0513 50 8e-07
Superfamily II DNA and RNA helicase K Contig28 Nham1150 COG0513 37 0.006
Superfamily II DNA and RNA helicase K Contig28 Nham1352 COG0513 62 2e-10
Superfamily II DNA and RNA helicase K Contig28 Nham1985 COG0513 46 2e-05
Superfamily II DNA and RNA helicase K Contig28 Nham2002 COG0513 104 2e-23
Superfamily II DNA and RNA helicase K Contig28 Nham2053 COG0513 84 8e-17
Superfamily II DNA and RNA helicase K Contig28 Nham2055 COG0513 64 4e-11
Superfamily II DNA and RNA helicase K Contig28 Nham2321 COG0513 402 1.0e-113
Superfamily II DNA and RNA helicase K Contig28 Nham2923 COG0513 64 5e-11
Superfamily II DNA and RNA helicase K Contig28 Nham3439 COG0513 101 2e-22
Superfamily II DNA and RNA helicase K Contig28 Nham3708 COG0513 50 2e-07
Superfamily II DNA/RNA helicase SNF2 family K Contig25 Nham4656 COG0553 56 3e-08
Superfamily II DNA/RNA helicase SNF2 family K Contig26 Nham4476 COG0553 64 1e-10
Superfamily II DNA/RNA helicase SNF2 family K Contig28 Nham0400 COG0553 37 0.002
Superfamily II DNA/RNA helicase SNF2 family K Contig28 Nham0580 COG0553 80 8e-16
Superfamily II DNA/RNA helicase SNF2 family K Contig28 Nham1352 COG0553 64 6e-11
Superfamily II DNA/RNA helicase SNF2 family K Contig28 Nham2321 COG0553 44 2e-05
Superfamily II DNA/RNA helicase SNF2 family K Contig28 Nham2839 COG0553 334 3e-92
Transcriptional accessory protein K Contig28 Nham0035 COG2183 66 1e-11
Transcriptional accessory protein K Contig28 Nham0163 COG2183 76 6e-15
Transcriptional accessory protein K Contig28 Nham1037 COG2183 941 0.0
Transcriptional activator of acetoin/glycerol metabolism K Contig27 Nham4288 COG3284 38 0.002
Transcriptional activator of acetoin/glycerol metabolism K Contig27 Nham4344 COG3284 37 0.002
Transcriptional activator of acetoin/glycerol metabolism K Contig28 Nham0681 COG3284 38 0.004
Transcriptional activator of acetoin/glycerol metabolism K Contig28 Nham0687 COG3284 232 5e-62
Transcriptional activator of acetoin/glycerol metabolism K Contig28 Nham1224 COG3284 253 2e-68
Transcriptional activator of acetoin/glycerol metabolism K Contig28 Nham1837 COG3284 264 1e-71
Transcriptional activator of acetoin/glycerol metabolism K Contig28 Nham1839 COG3284 227 1e-60
Transcriptional activator of acetoin/glycerol metabolism K Contig28 Nham2228 COG3284 37 0.002
Transcriptional activator of acetoin/glycerol metabolism K Contig28 Nham2815 COG3284 34 0.006
Transcriptional activator of acetoin/glycerol metabolism K Contig28 Nham2901 COG3284 35 0.001
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain K Contig28 Nham0160 COG4977 56 3e-09
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain K Contig28 Nham2823 COG4977 75 7e-15
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain K Contig28 Nham2960 COG4977 121 3e-29
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain K Contig28 Nham2987 COG4977 53 2e-08
Transcriptional regulator effector-binding domain/component K Contig28 Nham3576 COG4978 46 3e-06

TRANSCRIPTIONAL REGULATORS

COG Name Group Contig Gene COG ID Score Evalue
ATP-dependent transcriptional regulator protein K Contig25 Nham4558 COG2909 35 0.007
ATP-dependent transcriptional regulator protein K Contig26 Nham4396 COG2909 38 6e-04
ATP-dependent transcriptional regulator protein K Contig26 Nham4435 COG2909 40 1e-04
ATP-dependent transcriptional regulator protein K Contig28 Nham0273 COG2909 56 2e-09
ATP-dependent transcriptional regulator protein K Contig28 Nham0872 COG2909 46 1e-06
ATP-dependent transcriptional regulator protein K Contig28 Nham1032 COG2909 60 1e-10
ATP-dependent transcriptional regulator protein K Contig28 Nham1881 COG2909 51 4e-08
ATP-dependent transcriptional regulator protein K Contig28 Nham1906 COG2909 41 5e-05
ATP-dependent transcriptional regulator protein K Contig28 Nham2943 COG2909 51 8e-08
ATP-dependent transcriptional regulator protein K Contig28 Nham3000 COG2909 55 5e-09
Predicted transcriptional regulator protein consists of a Zn-ribbon and ATP-cone domains K Contig28 Nham1815 COG1327 191 2e-50
Predicted transcriptional regulator protein containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain K Contig27 Nham4274 COG0864 34 0.004
Predicted transcriptional regulator protein containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain K Contig28 Nham3868 COG0864 38 3e-04
Predicted transcriptional regulator protein containing the CopG/Arc/MetJ DNA-binding domain K Contig28 Nham3868 COG3609 37 6e-04
Predicted transcriptional regulator protein containing the HTH domain K Contig25 Nham4583 COG1386 157 5e-40
Predicted transcriptional regulator protein containing the HTH domain K Contig26 Nham4509 COG1386 130 1e-31
Predicted transcriptional regulator protein containing the HTH domain K Contig28 Nham1762 COG1386 157 6e-40
Predicted transcriptional regulator protein K Contig25 Nham4572 COG1475 77 2e-15
Predicted transcriptional regulator protein K Contig25 Nham4657 COG2944 47 6e-07
Predicted transcriptional regulator protein K Contig25 Nham4659 COG1475 88 1e-18
Predicted transcriptional regulator protein K Contig26 Nham4373 COG2524 51 4e-08
Predicted transcriptional regulator protein K Contig26 Nham4421 COG0789 89 2e-19
Predicted transcriptional regulator protein K Contig26 Nham4425 COG0640 58 2e-10
Predicted transcriptional regulator protein K Contig26 Nham4431 COG0640 59 3e-10
Predicted transcriptional regulator protein K Contig26 Nham4431 COG1777 36 0.003
Predicted transcriptional regulator protein K Contig26 Nham4432 COG0640 49 7e-08
Predicted transcriptional regulator protein K Contig26 Nham4477 COG1475 87 3e-18
Predicted transcriptional regulator protein K Contig26 Nham4518 COG1475 80 3e-16
Predicted transcriptional regulator protein K Contig26 Nham4521 COG3636 36 6e-04
Predicted transcriptional regulator protein K Contig27 Nham4277 COG3636 36 8e-04
Predicted transcriptional regulator protein K Contig27 Nham4280 COG1475 86 4e-18
Predicted transcriptional regulator protein K Contig28 Nham0026 COG1396 53 5e-09
Predicted transcriptional regulator protein K Contig28 Nham0026 COG1476 36 0.001
Predicted transcriptional regulator protein K Contig28 Nham0102 COG1475 135 5e-33
Predicted transcriptional regulator protein K Contig28 Nham0207 COG2944 38 2e-04
Predicted transcriptional regulator protein K Contig28 Nham0459 COG2345 34 0.007
Predicted transcriptional regulator protein K Contig28 Nham0557 COG2932 164 5e-42
Predicted transcriptional regulator protein K Contig28 Nham0578 COG1476 32 0.007
Predicted transcriptional regulator protein K Contig28 Nham0618 COG3355 41 5e-05
Predicted transcriptional regulator protein K Contig28 Nham0774 COG0640 61 2e-11
Predicted transcriptional regulator protein K Contig28 Nham0774 COG1777 48 1e-07
Predicted transcriptional regulator protein K Contig28 Nham0774 COG2345 35 0.001
Predicted transcriptional regulator protein K Contig28 Nham0800 COG3620 33 0.004
Predicted transcriptional regulator protein K Contig28 Nham0800 COG1709 34 0.003
Predicted transcriptional regulator protein K Contig28 Nham0803 COG1475 71 1e-13
Predicted transcriptional regulator protein K Contig28 Nham0859 COG3620 67 9e-13
Predicted transcriptional regulator protein K Contig28 Nham0859 COG2524 54 7e-09
Predicted transcriptional regulator protein K Contig28 Nham0944 COG0640 43 7e-06
Predicted transcriptional regulator protein K Contig28 Nham1070 COG1695 59 1e-10
Predicted transcriptional regulator protein K Contig28 Nham1096 COG1396 49 7e-07
Predicted transcriptional regulator protein K Contig28 Nham1096 COG1476 40 4e-04
Predicted transcriptional regulator protein K Contig28 Nham1107 COG3620 35 9e-04
Predicted transcriptional regulator protein K Contig28 Nham1350 COG1396 38 0.001
Predicted transcriptional regulator protein K Contig28 Nham1511 COG2345 33 0.009
Predicted transcriptional regulator protein K Contig28 Nham1588 COG0789 65 4e-12
Predicted transcriptional regulator protein K Contig28 Nham1649 COG3620 40 5e-05
Predicted transcriptional regulator protein K Contig28 Nham1649 COG2524 44 3e-06
Predicted transcriptional regulator protein K Contig28 Nham1729 COG2932 55 4e-09
Predicted transcriptional regulator protein K Contig28 Nham1856 COG1777 34 0.003
Predicted transcriptional regulator protein K Contig28 Nham1897 COG3620 44 1e-05
Predicted transcriptional regulator protein K Contig28 Nham1897 COG2524 55 7e-09
Predicted transcriptional regulator protein K Contig28 Nham1902 COG3620 56 2e-09
Predicted transcriptional regulator protein K Contig28 Nham1902 COG2524 70 2e-13
Predicted transcriptional regulator protein K Contig28 Nham1912 COG3620 60 1e-10
Predicted transcriptional regulator protein K Contig28 Nham1912 COG2524 70 2e-13
Predicted transcriptional regulator protein K Contig28 Nham1918 COG3620 46 1e-06
Predicted transcriptional regulator protein K Contig28 Nham1918 COG2524 68 4e-13
Predicted transcriptional regulator protein K Contig28 Nham1933 COG3620 58 4e-10
Predicted transcriptional regulator protein K Contig28 Nham1933 COG2524 68 8e-13
Predicted transcriptional regulator protein K Contig28 Nham1947 COG3620 56 2e-09
Predicted transcriptional regulator protein K Contig28 Nham1947 COG2524 64 8e-12
Predicted transcriptional regulator protein K Contig28 Nham2033 COG3311 59 5e-11
Predicted transcriptional regulator protein K Contig28 Nham2156 COG3311 38 2e-04
Predicted transcriptional regulator protein K Contig28 Nham2246 COG0640 47 3e-07
Predicted transcriptional regulator protein K Contig28 Nham2246 COG1777 32 0.009
Predicted transcriptional regulator protein K Contig28 Nham2246 COG2345 33 0.006
Predicted transcriptional regulator protein K Contig28 Nham2405 COG2932 75 6e-15
Predicted transcriptional regulator protein K Contig28 Nham2433 COG2944 67 5e-13
Predicted transcriptional regulator protein K Contig28 Nham2433 COG1396 40 4e-05
Predicted transcriptional regulator protein K Contig28 Nham2433 COG1476 37 3e-04
Predicted transcriptional regulator protein K Contig28 Nham2521 COG1396 34 0.002
Predicted transcriptional regulator protein K Contig28 Nham2521 COG3620 34 0.002
Predicted transcriptional regulator protein K Contig28 Nham2521 COG1476 43 5e-06
Predicted transcriptional regulator protein K Contig28 Nham2540 COG3620 39 1e-04
Predicted transcriptional regulator protein K Contig28 Nham2540 COG2524 37 4e-04
Predicted transcriptional regulator protein K Contig28 Nham2546 COG3620 48 1e-06
Predicted transcriptional regulator protein K Contig28 Nham2546 COG2524 69 6e-13
Predicted transcriptional regulator protein K Contig28 Nham3286 COG1959 125 9e-31
Predicted transcriptional regulator protein K Contig28 Nham3352 COG2932 84 1e-17
Predicted transcriptional regulator protein K Contig28 Nham3355 COG1396 36 0.006
Predicted transcriptional regulator protein K Contig28 Nham3413 COG3620 50 3e-07
Predicted transcriptional regulator protein K Contig28 Nham3413 COG2524 58 1e-09
Predicted transcriptional regulator protein K Contig28 Nham3492 COG1959 133 4e-33
Predicted transcriptional regulator protein K Contig28 Nham3524 COG2524 39 0.001
Predicted transcriptional regulator protein K Contig28 Nham3726 COG0789 85 2e-18
Putative transcriptional regulator protein K Contig28 Nham3550 COG1678 233 8e-63
Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains K Contig28 Nham0681 COG3604 37 0.007
Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains K Contig28 Nham0687 COG3604 329 3e-91
Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains K Contig28 Nham1224 COG3604 305 4e-84
Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains K Contig28 Nham1837 COG3604 312 3e-86
Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains K Contig28 Nham1839 COG3604 282 2e-77
Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains K Contig28 Nham2901 COG3604 41 2e-05
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K Contig27 Nham4198 COG3829 36 0.010
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K Contig28 Nham0130 COG3829 41 1e-04
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K Contig28 Nham0362 COG3829 48 2e-07
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K Contig28 Nham0687 COG3829 346 2e-96
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K Contig28 Nham1224 COG3829 344 7e-96
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K Contig28 Nham1241 COG3829 41 3e-04
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K Contig28 Nham1249 COG3829 40 9e-04
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K Contig28 Nham1836 COG3829 39 6e-04
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K Contig28 Nham1837 COG3829 322 3e-89
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K Contig28 Nham1838 COG3829 39 0.002
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K Contig28 Nham1839 COG3829 307 8e-85
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K Contig28 Nham1907 COG3829 58 1e-09
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K Contig28 Nham2901 COG3829 46 6e-07
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K Contig28 Nham3488 COG3829 45 1e-05
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K Contig28 Nham3506 COG3829 41 2e-04
Transcriptional regulator contains sigma factor-related N-terminal domain K Contig28 Nham0139 COG2390 40 5e-04
Transcriptional regulator contains sigma factor-related N-terminal domain K Contig28 Nham1258 COG2390 39 4e-04
Transcriptional regulator contains sigma factor-related N-terminal domain K Contig28 Nham2791 COG2390 37 0.002
Transcriptional regulator K Contig26 Nham4425 COG1414 33 0.009
Transcriptional regulator K Contig26 Nham4431 COG1414 39 5e-04
Transcriptional regulator K Contig27 Nham4044 COG0583 150 9e-38
Transcriptional regulator K Contig27 Nham4331 COG0583 152 3e-38
Transcriptional regulator K Contig28 Nham0036 COG0583 127 1e-30
Transcriptional regulator K Contig28 Nham0242 COG0583 137 8e-34
Transcriptional regulator K Contig28 Nham0716 COG1309 53 2e-08
Transcriptional regulator K Contig28 Nham0756 COG0583 121 7e-29
Transcriptional regulator K Contig28 Nham0847 COG0583 94 1e-20
Transcriptional regulator K Contig28 Nham0935 COG1309 54 7e-09
Transcriptional regulator K Contig28 Nham1043 COG0583 132 3e-32
Transcriptional regulator K Contig28 Nham1083 COG1309 57 1e-09
Transcriptional regulator K Contig28 Nham2695 COG1309 49 2e-07
Transcriptional regulator K Contig28 Nham2701 COG1309 48 5e-07
Transcriptional regulator K Contig28 Nham2879 COG1414 33 0.008
Transcriptional regulator K Contig28 Nham2881 COG0583 150 1e-37
Transcriptional regulator K Contig28 Nham2953 COG0583 42 5e-05
Transcriptional regulator K Contig28 Nham3206 COG1309 41 8e-05
Transcriptional regulator K Contig28 Nham3280 COG0583 153 1e-38
Transcriptional regulator K Contig28 Nham3517 COG1309 61 7e-11
Transcriptional regulator K Contig28 Nham3644 COG0583 120 9e-29
Transcriptional regulator K Contig28 Nham3755 COG0583 152 4e-38
Transcriptional regulator of a riboflavin/FAD biosynthetic operon K Contig28 Nham0249 COG1339 34 0.007
Transcriptional regulator of aromatic amino acids metabolism K Contig28 Nham0687 COG3283 247 2e-66
Transcriptional regulator of aromatic amino acids metabolism K Contig28 Nham1224 COG3283 248 7e-67
Transcriptional regulator of aromatic amino acids metabolism K Contig28 Nham1836 COG3283 38 0.002
Transcriptional regulator of aromatic amino acids metabolism K Contig28 Nham1837 COG3283 223 3e-59
Transcriptional regulator of aromatic amino acids metabolism K Contig28 Nham1838 COG3283 39 0.002
Transcriptional regulator of aromatic amino acids metabolism K Contig28 Nham1839 COG3283 211 1e-55
Transcriptional regulator of aromatic amino acids metabolism K Contig28 Nham1907 COG3283 36 0.008
Transcriptional regulator of heat shock gene K Contig28 Nham0152 COG1420 339 2e-94
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig28 Nham0089 COG1167 123 3e-29
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig28 Nham0674 COG1167 82 5e-17
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig28 Nham1103 COG1167 125 8e-30
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig28 Nham1305 COG1167 38 0.001
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig28 Nham1500 COG1167 138 4e-34
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig28 Nham1875 COG1167 37 0.002
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig28 Nham2183 COG1167 155 5e-39
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig28 Nham2310 COG1167 162 5e-41
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig28 Nham2325 COG1167 39 8e-04
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig28 Nham2329 COG1167 36 0.006
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig28 Nham2458 COG1167 40 5e-04
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig28 Nham2804 COG1167 40 3e-04
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig28 Nham2816 COG1167 41 2e-04
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig28 Nham3035 COG1167 48 8e-07
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig28 Nham3037 COG1167 36 0.004
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig28 Nham3111 COG1167 38 0.001
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K Contig27 Nham4051 COG1221 42 5e-05
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K Contig28 Nham0120 COG1221 36 0.005
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K Contig28 Nham0130 COG1221 38 7e-04
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K Contig28 Nham0681 COG1221 38 0.002
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K Contig28 Nham0687 COG1221 275 4e-75
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K Contig28 Nham1224 COG1221 255 5e-69
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K Contig28 Nham1361 COG1221 37 0.007
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K Contig28 Nham1573 COG1221 46 6e-06
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K Contig28 Nham1837 COG1221 256 3e-69
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K Contig28 Nham1839 COG1221 230 2e-61
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K Contig28 Nham2228 COG1221 39 6e-04
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K Contig28 Nham2416 COG1221 40 5e-04
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K Contig28 Nham2901 COG1221 33 0.003
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K Contig28 Nham3749 COG1221 42 5e-05
Transcriptional regulators K Contig26 Nham4432 COG1846 32 0.010
Transcriptional regulators K Contig28 Nham0249 COG1846 44 6e-06
Transcriptional regulators K Contig28 Nham0459 COG1522 132 1e-32
Transcriptional regulators K Contig28 Nham0617 COG1846 64 5e-12
Transcriptional regulators K Contig28 Nham0658 COG1846 54 6e-09
Transcriptional regulators K Contig28 Nham1296 COG1737 57 1e-09
Transcriptional regulators K Contig28 Nham1309 COG1522 53 3e-09
Transcriptional regulators K Contig28 Nham1511 COG1846 64 6e-12
Transcriptional regulators K Contig28 Nham2057 COG1737 53 5e-08
Transcriptional regulators K Contig28 Nham2238 COG1846 46 2e-06
Transcriptional regulators K Contig28 Nham2879 COG1522 134 2e-33
Transcriptional regulators K Contig28 Nham3138 COG1846 62 3e-11
Transcriptional regulators K Contig28 Nham3413 COG1737 83 2e-17
Transcriptional regulators K Contig28 Nham3666 COG1846 67 5e-13
Transcriptional regulators of sugar metabolism K Contig28 Nham1480 COG1349 36 0.002
Transcriptional regulators of sugar metabolism K Contig28 Nham2879 COG1349 34 0.004
Transcriptional regulators similar to M. xanthus CarD K Contig28 Nham0507 COG1329 187 9e-49
Transcriptional regulator/sugar kinase K Contig26 Nham4371 COG1940 38 9e-04
Transcriptional regulator/sugar kinase K Contig28 Nham0513 COG1940 51 2e-07
Transcriptional regulator/sugar kinase K Contig28 Nham2098 COG1940 83 2e-17
COG Name Group Contig Gene COG ID Score Evalue
Transcription-repair coupling factor (superfamily II helicase) K Contig28 Nham0507 COG1197 35 0.005
Transcription-repair coupling factor (superfamily II helicase) K Contig28 Nham0535 COG1197 62 1e-10
Transcription-repair coupling factor (superfamily II helicase) K Contig28 Nham2053 COG1197 1316 0.0
Transcription-repair coupling factor (superfamily II helicase) K Contig28 Nham2055 COG1197 320 2e-88
Transcription-repair coupling factor (superfamily II helicase) K Contig28 Nham2923 COG1197 120 4e-28

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