| Kingdom |
Category |
Genus/Species |
Count |
|
|
|
40 |
| Archaea |
|
|
5 |
| |
|
|
40 |
| |
Euryarchaeota |
|
5 |
| |
|
Haloarcula marismortui (hma) |
1 |
| |
|
Haloquadratum walsbyi (hwa) |
2 |
| |
|
Methanocorpusculum labreanum (mla) |
1 |
| |
|
Uncultured methanogenic archaeon RC-I (rci) |
1 |
| Bacteria |
|
|
3969 |
| |
Acidobacteria |
|
14 |
| |
|
Acidobacteria bacterium (aba) |
9 |
| |
|
Solibacter usitatus (sus) |
5 |
| |
Actinobacteria |
|
25 |
| |
|
Arthrobacter sp. FB24 (art) |
1 |
| |
|
Frankia sp. EAN1pec (fre) |
1 |
| |
|
Leifsonia xyli xyli CTCB07 (lxx) |
1 |
| |
|
Mycobacterium sp. JLS (mjl) |
1 |
| |
|
Mycobacterium sp. KMS (mkm) |
1 |
| |
|
Mycobacterium tuberculosis H37Ra (mra) |
1 |
| |
|
Mycobacterium smegmatis (msm) |
3 |
| |
|
Mycobacterium tuberculosis CDC1551 (mtc) |
1 |
| |
|
Mycobacterium vanbaalenii (mva) |
1 |
| |
|
Nocardioides sp. JS614 (nca) |
2 |
| |
|
Nocardia farcinica (nfa) |
3 |
| |
|
Rhodococcus sp. RHA1 (rha) |
2 |
| |
|
Streptomyces coelicolor (sco) |
1 |
| |
|
Saccharopolyspora erythraea (sen) |
1 |
| |
|
Streptomyces avermitilis (sma) |
5 |
| |
Bacteroides |
|
2 |
| |
|
Flavobacterium johnsoniae (fjo) |
1 |
| |
|
Gramella forsetii (gfo) |
1 |
| |
Cyanobacteria |
|
9 |
| |
|
Acaryochloris marina (amr) |
1 |
| |
|
Anabaena variabilis (ava) |
1 |
| |
|
Cyanobacteria Yellowstone A-Prime (cya) |
1 |
| |
|
Gloeobacter violaceus (gvi) |
3 |
| |
|
Prochlorococcus marinus MIT 9303 (pmf) |
1 |
| |
|
Synechocystis sp. PCC6803 (syn) |
1 |
| |
|
Synechococcus sp. WH8102 (syw) |
1 |
| |
Deinococcus-Thermus |
|
1 |
| |
|
Deinococcus radiodurans (dra) |
1 |
| |
Firmicutes |
|
11 |
| |
|
Bacillus cereus ATCC 10987 (bca) |
2 |
| |
|
Bacillus cereus ZK (bcz) |
1 |
| |
|
Clostridium kluyveri (ckl) |
1 |
| |
|
Geobacillus kaustophilus (gka) |
1 |
| |
|
Geobacillus thermodenitrificans (gtn) |
4 |
| |
|
Pediococcus pentosaceus (ppe) |
1 |
| |
|
Pelotomaculum thermopropionicum (pth) |
1 |
| |
Green nonsulfur bacteria |
|
9 |
| |
|
Chloroflexus aurantiacus (cau) |
3 |
| |
|
Dehalococcoides ethenogenes (det) |
1 |
| |
|
Roseiflexus castenholzii DSM13941 (rca) |
4 |
| |
|
Roseiflexus sp. RS-1 (rrs) |
1 |
| |
Green sulfur bacteria |
|
2 |
| |
|
Chlorobium phaeobacteroides (cph) |
1 |
| |
|
Chlorobaculum tepidum (cte) |
1 |
| |
Planctomyces |
|
3 |
| |
|
Rhodopirellula baltica (rba) |
3 |
| |
Proteobacteria |
|
3893 |
| |
|
Acidovorax avenae (aav) |
2 |
| |
|
Acidiphilium cryptum JF-5 (acr) |
21 |
| |
|
Anaeromyxobacter dehalogenans (ade) |
3 |
| |
|
Alkalilimnicola ehrlichei (aeh) |
2 |
| |
|
Anaeromyxobacter sp. Fw109-5 (afw) |
1 |
| |
|
Acidovorax sp. JS42 (ajs) |
4 |
| |
|
Agrobacterium tumefaciens C58 (Cereon) (atc) |
28 |
| |
|
Agrobacterium tumefaciens C58 (UWash/Dupont) (atu) |
2 |
| |
|
Azorhizobium caulinodans (azc) |
22 |
| |
|
Azoarcus sp. BH72 (azo) |
3 |
| |
|
Burkholderia cepacia (bam) |
3 |
| |
|
Bdellovibrio bacteriovorus (bba) |
3 |
| |
|
Bordetella bronchiseptica (bbr) |
4 |
| |
|
Bradyrhizobium sp. BTAi1 (bbt) |
122 |
| |
|
Burkholderia cenocepacia HI2424 (bch) |
2 |
| |
|
Brucella canis (bcs) |
1 |
| |
|
Bradyrhizobium japonicum (bja) |
305 |
| |
|
Brucella suis ATCC 23445 (bmt) |
1 |
| |
|
Burkholderia multivorans (bmu) |
4 |
| |
|
Brucella ovis (bov) |
14 |
| |
|
Bordetella parapertussis (bpa) |
1 |
| |
|
Burkholderia pseudomallei 1106a (bpl) |
2 |
| |
|
Bordetella petrii (bpt) |
4 |
| |
|
Bradyrhizobium sp. ORS278 (bra) |
89 |
| |
|
Burkholderia thailandensis (bte) |
1 |
| |
|
Bartonella tribocorum (btr) |
2 |
| |
|
Burkholderia sp. 383 (bur) |
3 |
| |
|
Burkholderia vietnamiensis (bvi) |
4 |
| |
|
Burkholderia xenovorans (bxe) |
12 |
| |
|
Coxiella burnetii RSA 331 (cbs) |
1 |
| |
|
Caulobacter crescentus (ccr) |
3 |
| |
|
Chromobacterium violaceum (cvi) |
9 |
| |
|
Delftia acidovorans (dac) |
2 |
| |
|
Dechloromonas aromatica (dar) |
3 |
| |
|
Candidatus Desulfococcus oleovorans (dol) |
2 |
| |
|
Dinoroseobacter shibae (dsh) |
5 |
| |
|
Desulfovibrio vulgaris DP4 (dvl) |
1 |
| |
|
Azoarcus sp. EbN1 (eba) |
8 |
| |
|
Erwinia carotovora (eca) |
1 |
| |
|
Escherichia coli HS (ecx) |
1 |
| |
|
Erythrobacter litoralis (eli) |
1 |
| |
|
Enterobacter sp. 638 (ent) |
1 |
| |
|
Enterobacter sakazakii (esa) |
1 |
| |
|
Francisella tularensis subsp. novicida U112 (ftn) |
1 |
| |
|
Granulobacter bethesdensis (gbe) |
2 |
| |
|
Gluconacetobacter diazotrophicus (gdi) |
9 |
| |
|
Geobacter metallireducens (gme) |
5 |
| |
|
Gluconobacter oxydans (gox) |
1 |
| |
|
Geobacter sulfurreducens (gsu) |
1 |
| |
|
Geobacter uraniumreducens (gur) |
2 |
| |
|
Hahella chejuensis (hch) |
5 |
| |
|
Halorhodospira halophila (hha) |
20 |
| |
|
Hyphomonas neptunium (hne) |
6 |
| |
|
Jannaschia sp. CCS1 (jan) |
3 |
| |
|
Legionella pneumophila Lens (lpf) |
1 |
| |
|
Magnetospirillum magneticum (mag) |
11 |
| |
|
Methylococcus capsulatus (mca) |
9 |
| |
|
Mesorhizobium sp. BNC1 (mes) |
52 |
| |
|
Methylobacterium extorquens (mex) |
33 |
| |
|
Magnetococcus sp. MC-1 (mgm) |
4 |
| |
|
Mesorhizobium loti (mlo) |
62 |
| |
|
Maricaulis maris (mmr) |
3 |
| |
|
Minibacterium massiliensis (mms) |
1 |
| |
|
Novosphingobium aromaticivorans (nar) |
3 |
| |
|
Nitrosomonas eutropha (net) |
6 |
| |
|
Nitrosomonas europaea (neu) |
4 |
| |
|
Nitrosospira multiformis (nmu) |
9 |
| |
|
Nitrosococcus oceani (noc) |
8 |
| |
|
Nitrobacter winogradskyi (nwi) |
2173 |
| |
|
Ochrobactrum anthropi (oan) |
40 |
| |
|
Pseudomonas aeruginosa PA7 (pap) |
5 |
| |
|
Pelobacter carbinolicus (pca) |
3 |
| |
|
Paracoccus denitrificans (pde) |
15 |
| |
|
Pseudomonas entomophila (pen) |
2 |
| |
|
Pseudomonas fluorescens Pf-5 (pfl) |
2 |
| |
|
Pseudomonas fluorescens PfO-1 (pfo) |
1 |
| |
|
Psychromonas ingrahamii (pin) |
2 |
| |
|
Parvibaculum lavamentivorans (pla) |
14 |
| |
|
Photorhabdus luminescens (plu) |
2 |
| |
|
Polaromonas naphthalenivorans (pna) |
8 |
| |
|
Polaromonas sp. JS666 (pol) |
11 |
| |
|
Pelobacter propionicus (ppd) |
4 |
| |
|
Pseudomonas putida F1 (ppf) |
1 |
| |
|
Photobacterium profundum (ppr) |
1 |
| |
|
Pseudomonas putida KT2440 (ppu) |
1 |
| |
|
Pseudomonas stutzeri (psa) |
5 |
| |
|
Pseudomonas syringae pv. syringae B728a (psb) |
2 |
| |
|
Pseudomonas syringae pv. phaseolicola 1448A (psp) |
2 |
| |
|
Roseobacter denitrificans (rde) |
1 |
| |
|
Ralstonia eutropha H16 (reh) |
2 |
| |
|
Rhizobium etli (ret) |
15 |
| |
|
Ralstonia eutropha JMP134 (reu) |
1 |
| |
|
Rhodoferax ferrireducens (rfr) |
4 |
| |
|
Rhizobium leguminosarum (rle) |
26 |
| |
|
Ralstonia metallidurans (rme) |
7 |
| |
|
Rhodopseudomonas palustris CGA009 (rpa) |
43 |
| |
|
Rhodopseudomonas palustris HaA2 (rpb) |
57 |
| |
|
Rhodopseudomonas palustris BisB18 (rpc) |
95 |
| |
|
Rhodopseudomonas palustris BisB5 (rpd) |
74 |
| |
|
Rhodopseudomonas palustris BisA53 (rpe) |
76 |
| |
|
Rhodospirillum rubrum (rru) |
9 |
| |
|
Rhodobacter sphaeroides ATCC 17029 (rsh) |
6 |
| |
|
Ralstonia solanacearum (rso) |
4 |
| |
|
Rhodobacter sphaeroides 2.4.1 (rsp) |
15 |
| |
|
Rhodobacter sphaeroides ATCC 17025 (rsq) |
16 |
| |
|
Sphingopyxis alaskensis (sal) |
11 |
| |
|
Syntrophus aciditrophicus (sat) |
2 |
| |
|
Shewanella amazonensis (saz) |
1 |
| |
|
Shewanella baltica OS185 (sbm) |
1 |
| |
|
Sorangium cellulosum (scl) |
6 |
| |
|
Saccharophagus degradans (sde) |
4 |
| |
|
Salmonella enterica subsp. arizonae (ses) |
1 |
| |
|
Shewanella frigidimarina (sfr) |
1 |
| |
|
Syntrophobacter fumaroxidans (sfu) |
1 |
| |
|
Shigella flexneri 8401 (serotype 5b) (sfv) |
1 |
| |
|
Silicibacter pomeroyi (sil) |
8 |
| |
|
Silicibacter sp. TM1040 (sit) |
2 |
| |
|
Sinorhizobium medicae (smd) |
38 |
| |
|
Sinorhizobium meliloti (sme) |
18 |
| |
|
Serratia proteamaculans (spe) |
2 |
| |
|
Sphingomonas wittichii (swi) |
15 |
| |
|
Thiobacillus denitrificans (tbd) |
1 |
| |
|
Thiomicrospira crunogena (tcx) |
1 |
| |
|
Vibrio cholerae O395 (vco) |
1 |
| |
|
Verminephrobacter eiseniae (vei) |
1 |
| |
|
Vibrio vulnificus YJ016 (vvy) |
1 |
| |
|
Wolinella succinogenes (wsu) |
3 |
| |
|
Xanthobacter autotrophicus (xau) |
56 |
| |
|
Xanthomonas campestris pv. campestris 8004 (xcb) |
4 |
| |
|
Xanthomonas campestris pv. vesicatoria (xcv) |
1 |
| |
|
Xylella fastidiosa 9a5c (xfa) |
1 |
| |
|
Xanthomonas oryzae MAFF311018 (xom) |
1 |
| Eukaryotes |
|
|
5 |
| |
Animals |
|
2 |
| |
|
Caenorhabditis elegans (nematode) (cel) |
1 |
| |
|
Strongylocentrotus purpuratus (purple sea urchin) (spu) |
1 |
| |
Fungi |
|
3 |
| |
|
Aspergillus oryzae (aor) |
2 |
| |
|
Cryptococcus neoformans JEC21 (cne) |
1 |
| NULL |
|
|
309 |
| TOTAL |
|
|
4328 |
![[space]](http://homer.ornl.gov/compbio/public/images/bluespacer.gif){kind=small}
![[space]](http://maple.lsd.ornl.gov/common/images/bluespacer.gif){kind=small}