| Kingdom |
Category |
Genus/Species |
Count |
|
|
|
28 |
| Archaea |
|
|
3 |
| |
|
|
28 |
| |
Euryarchaeota |
|
3 |
| |
|
Methanosarcina acetivorans (mac) |
1 |
| |
|
Methanococcus vannielii (mvn) |
1 |
| |
|
Pyrococcus abyssi (pab) |
1 |
| Bacteria |
|
|
2469 |
| |
Acidobacteria |
|
5 |
| |
|
Acidobacteria bacterium (aba) |
2 |
| |
|
Solibacter usitatus (sus) |
3 |
| |
Actinobacteria |
|
5 |
| |
|
Corynebacterium diphtheriae (cdi) |
1 |
| |
|
Clavibacter michiganensis (cmi) |
1 |
| |
|
Mycobacterium tuberculosis H37Ra (mra) |
1 |
| |
|
Rhodococcus sp. RHA1 (rha) |
1 |
| |
|
Thermobifida fusca (tfu) |
1 |
| |
Bacteroides |
|
6 |
| |
|
Flavobacterium johnsoniae (fjo) |
4 |
| |
|
Porphyromonas gingivalis (pgi) |
1 |
| |
|
Salinibacter ruber (sru) |
1 |
| |
Cyanobacteria |
|
8 |
| |
|
Acaryochloris marina (amr) |
2 |
| |
|
Anabaena sp. PCC7120 (ana) |
2 |
| |
|
Anabaena variabilis (ava) |
1 |
| |
|
Cyanobacteria Yellowstone A-Prime (cya) |
1 |
| |
|
Synechococcus elongatus PCC7942 (syf) |
1 |
| |
|
Trichodesmium erythraeum (ter) |
1 |
| |
Deinococcus-Thermus |
|
3 |
| |
|
Deinococcus geothermalis (dge) |
3 |
| |
Firmicutes |
|
11 |
| |
|
Alkaliphilus metalliredigens (amt) |
1 |
| |
|
Bacillus pumilus (bpu) |
1 |
| |
|
Bacillus subtilis (bsu) |
1 |
| |
|
Clostridium perfringens SM101 (cpr) |
1 |
| |
|
Clostridium thermocellum (cth) |
1 |
| |
|
Mycoplasma penetrans (mpe) |
1 |
| |
|
Oceanobacillus iheyensis (oih) |
1 |
| |
|
Staphylococcus aureus NCTC8325 (sao) |
1 |
| |
|
Staphylococcus aureus MSSA476 (sas) |
1 |
| |
|
Staphylococcus haemolyticus (sha) |
1 |
| |
|
Streptococcus thermophilus LMD-9 (ste) |
1 |
| |
Green nonsulfur bacteria |
|
3 |
| |
|
Herpetosiphon aurantiacus (hau) |
1 |
| |
|
Roseiflexus sp. RS-1 (rrs) |
2 |
| |
Green sulfur bacteria |
|
10 |
| |
|
Chlorobium chlorochromatii (cch) |
5 |
| |
|
Chlorobium phaeobacteroides (cph) |
5 |
| |
Hyperthermophilic bacteria |
|
1 |
| |
|
Aquifex aeolicus (aae) |
1 |
| |
Planctomyces |
|
1 |
| |
|
Rhodopirellula baltica (rba) |
1 |
| |
Proteobacteria |
|
2415 |
| |
|
Acidovorax avenae (aav) |
3 |
| |
|
Alcanivorax borkumensis (abo) |
1 |
| |
|
Acinetobacter baumannii (acb) |
4 |
| |
|
Acidiphilium cryptum JF-5 (acr) |
1 |
| |
|
Alkalilimnicola ehrlichei (aeh) |
2 |
| |
|
Anaeromyxobacter sp. Fw109-5 (afw) |
3 |
| |
|
Acidovorax sp. JS42 (ajs) |
26 |
| |
|
Aeromonas salmonicida (asa) |
6 |
| |
|
Agrobacterium tumefaciens C58 (Cereon) (atc) |
1 |
| |
|
Azorhizobium caulinodans (azc) |
2 |
| |
|
Azoarcus sp. BH72 (azo) |
1 |
| |
|
Burkholderia cepacia (bam) |
2 |
| |
|
Buchnera aphidicola Sg (bas) |
1 |
| |
|
Bdellovibrio bacteriovorus (bba) |
1 |
| |
|
Bordetella bronchiseptica (bbr) |
5 |
| |
|
Bradyrhizobium sp. BTAi1 (bbt) |
2 |
| |
|
Burkholderia cenocepacia HI2424 (bch) |
2 |
| |
|
Brucella canis (bcs) |
4 |
| |
|
Bradyrhizobium japonicum (bja) |
3 |
| |
|
Brucella suis (bms) |
1 |
| |
|
Burkholderia multivorans (bmu) |
4 |
| |
|
Bordetella parapertussis (bpa) |
1 |
| |
|
Burkholderia pseudomallei 668 (bpd) |
2 |
| |
|
Bordetella pertussis (bpe) |
1 |
| |
|
Burkholderia pseudomallei 1106a (bpl) |
3 |
| |
|
Burkholderia pseudomallei K96243 (bps) |
1 |
| |
|
Bordetella petrii (bpt) |
31 |
| |
|
Bradyrhizobium sp. ORS278 (bra) |
1 |
| |
|
Bartonella tribocorum (btr) |
1 |
| |
|
Burkholderia sp. 383 (bur) |
1 |
| |
|
Burkholderia vietnamiensis (bvi) |
9 |
| |
|
Burkholderia xenovorans (bxe) |
8 |
| |
|
Campylobacter jejuni RM1221 (cjr) |
1 |
| |
|
Citrobacter koseri ATCC BAA-895 (cko) |
1 |
| |
|
Colwellia psychrerythraea (cps) |
2 |
| |
|
Chromohalobacter salexigens (csa) |
1 |
| |
|
Chromobacterium violaceum (cvi) |
1 |
| |
|
Delftia acidovorans (dac) |
9 |
| |
|
Dechloromonas aromatica (dar) |
11 |
| |
|
Desulfovibrio desulfuricans (dde) |
2 |
| |
|
Dichelobacter nodosus (dno) |
1 |
| |
|
Candidatus Desulfococcus oleovorans (dol) |
3 |
| |
|
Desulfotalea psychrophila (dps) |
2 |
| |
|
Dinoroseobacter shibae (dsh) |
10 |
| |
|
Desulfovibrio vulgaris DP4 (dvl) |
3 |
| |
|
Desulfovibrio vulgaris Hildenborough (dvu) |
1 |
| |
|
Azoarcus sp. EbN1 (eba) |
28 |
| |
|
Erwinia carotovora (eca) |
1 |
| |
|
Enterobacter sp. 638 (ent) |
1 |
| |
|
Enterobacter sakazakii (esa) |
1 |
| |
|
Geobacter metallireducens (gme) |
1 |
| |
|
Geobacter sulfurreducens (gsu) |
1 |
| |
|
Geobacter uraniumreducens (gur) |
3 |
| |
|
Herminiimonas arsenicoxydans (har) |
13 |
| |
|
Hahella chejuensis (hch) |
8 |
| |
|
Hyphomonas neptunium (hne) |
1 |
| |
|
Haemophilus somnus (hso) |
1 |
| |
|
Idiomarina loihiensis (ilo) |
3 |
| |
|
Klebsiella pneumoniae (kpn) |
1 |
| |
|
Legionella pneumophila Corby (lpc) |
18 |
| |
|
Legionella pneumophila Lens (lpf) |
6 |
| |
|
Magnetospirillum magneticum (mag) |
1 |
| |
|
Marinobacter aquaeolei (maq) |
11 |
| |
|
Methylococcus capsulatus (mca) |
20 |
| |
|
Mesorhizobium sp. BNC1 (mes) |
3 |
| |
|
Methylobacterium extorquens (mex) |
1 |
| |
|
Methylobacillus flagellatus (mfa) |
3 |
| |
|
Minibacterium massiliensis (mms) |
6 |
| |
|
Marinomonas sp. MWYL1 (mmw) |
2 |
| |
|
Methylibium petroleiphilum (mpt) |
8 |
| |
|
Mannheimia succiniciproducens (msu) |
1 |
| |
|
Myxococcus xanthus (mxa) |
5 |
| |
|
Nitrosomonas europaea (neu) |
1684 |
| |
|
Nitrobacter hamburgensis (nha) |
17 |
| |
|
Neisseria meningitidis FAM18 (nmc) |
1 |
| |
|
Neisseria meningitidis MC58 (serogroup B) (nme) |
1 |
| |
|
Nitrosospira multiformis (nmu) |
30 |
| |
|
Nitrosococcus oceani (noc) |
24 |
| |
|
Nitrobacter winogradskyi (nwi) |
27 |
| |
|
Ochrobactrum anthropi (oan) |
8 |
| |
|
Pseudomonas aeruginosa PAO1 (pae) |
1 |
| |
|
Pseudomonas aeruginosa PA7 (pap) |
1 |
| |
|
Psychrobacter arcticum (par) |
3 |
| |
|
Pseudoalteromonas atlantica (pat) |
2 |
| |
|
Pseudomonas aeruginosa UCBPP-PA14 (pau) |
1 |
| |
|
Pseudomonas entomophila (pen) |
1 |
| |
|
Pseudomonas fluorescens Pf-5 (pfl) |
3 |
| |
|
Psychromonas ingrahamii (pin) |
5 |
| |
|
Parvibaculum lavamentivorans (pla) |
9 |
| |
|
Photorhabdus luminescens (plu) |
4 |
| |
|
Pseudomonas mendocina (pmy) |
4 |
| |
|
Polaromonas naphthalenivorans (pna) |
14 |
| |
|
Polaromonas sp. JS666 (pol) |
23 |
| |
|
Pelobacter propionicus (ppd) |
5 |
| |
|
Pseudomonas putida F1 (ppf) |
7 |
| |
|
Photobacterium profundum (ppr) |
1 |
| |
|
Pseudomonas putida KT2440 (ppu) |
5 |
| |
|
Psychrobacter sp. PRwf-1 (prw) |
1 |
| |
|
Pseudomonas stutzeri (psa) |
1 |
| |
|
Pseudomonas syringae pv. syringae B728a (psb) |
1 |
| |
|
Pseudomonas syringae pv. phaseolicola 1448A (psp) |
5 |
| |
|
Pseudomonas syringae pv. tomato DC3000 (pst) |
1 |
| |
|
Ralstonia eutropha H16 (reh) |
1 |
| |
|
Rhizobium etli (ret) |
2 |
| |
|
Ralstonia eutropha JMP134 (reu) |
3 |
| |
|
Rhodoferax ferrireducens (rfr) |
8 |
| |
|
Rhizobium leguminosarum (rle) |
4 |
| |
|
Ralstonia metallidurans (rme) |
15 |
| |
|
Rickettsia massiliae (rms) |
1 |
| |
|
Rhodopseudomonas palustris BisA53 (rpe) |
9 |
| |
|
Rhodospirillum rubrum (rru) |
2 |
| |
|
Rhodobacter sphaeroides ATCC 17029 (rsh) |
1 |
| |
|
Ralstonia solanacearum (rso) |
3 |
| |
|
Sphingopyxis alaskensis (sal) |
1 |
| |
|
Shewanella amazonensis (saz) |
1 |
| |
|
Shewanella baltica OS195 (sbn) |
2 |
| |
|
Shigella boydii (sbo) |
1 |
| |
|
Sorangium cellulosum (scl) |
4 |
| |
|
Saccharophagus degradans (sde) |
1 |
| |
|
Shewanella denitrificans (sdn) |
2 |
| |
|
Salmonella enterica serovar Choleraesuis (sec) |
3 |
| |
|
Shewanella frigidimarina (sfr) |
1 |
| |
|
Syntrophobacter fumaroxidans (sfu) |
1 |
| |
|
Shigella flexneri 8401 (serotype 5b) (sfv) |
1 |
| |
|
Shigella flexneri 2457T (serotype 2a) (sfx) |
23 |
| |
|
Shewanella sp. MR-7 (shm) |
1 |
| |
|
Shewanella sp. ANA-3 (shn) |
12 |
| |
|
Shewanella sp. W3-18-1 (shw) |
1 |
| |
|
Shewanella loihica (slo) |
1 |
| |
|
Sinorhizobium medicae (smd) |
2 |
| |
|
Shewanella putrefaciens (spc) |
2 |
| |
|
Serratia proteamaculans (spe) |
2 |
| |
|
Shewanella sediminis (sse) |
1 |
| |
|
Shigella sonnei (ssn) |
1 |
| |
|
Salmonella typhimurium LT2 (stm) |
4 |
| |
|
Salmonella enterica serovar Typhi CT18 (sty) |
5 |
| |
|
Sulfurovum sp. NBC37-1 (sun) |
1 |
| |
|
Sphingomonas wittichii (swi) |
1 |
| |
|
Thiobacillus denitrificans (tbd) |
10 |
| |
|
Thiomicrospira crunogena (tcx) |
3 |
| |
|
Vibrio cholerae O1 (vch) |
1 |
| |
|
Vibrio cholerae O395 (vco) |
1 |
| |
|
Verminephrobacter eiseniae (vei) |
13 |
| |
|
Vibrio fischeri (vfi) |
3 |
| |
|
Xanthomonas axonopodis (xac) |
3 |
| |
|
Xanthobacter autotrophicus (xau) |
2 |
| |
|
Xanthomonas campestris pv. campestris 8004 (xcb) |
2 |
| |
|
Xanthomonas campestris pv. vesicatoria (xcv) |
3 |
| |
|
Xylella fastidiosa 9a5c (xfa) |
10 |
| |
|
Xanthomonas oryzae MAFF311018 (xom) |
13 |
| |
|
Xanthomonas oryzae KACC10331 (xoo) |
5 |
| |
|
Yersinia pseudotuberculosis IP31758 (ypi) |
1 |
| |
|
Zymomonas mobilis (zmo) |
1 |
| |
Spirochete |
|
1 |
| |
|
Treponema denticola (tde) |
1 |
| Eukaryotes |
|
|
3 |
| |
Fungi |
|
2 |
| |
|
Aspergillus nidulans (ani) |
1 |
| |
|
Neurospora crassa (ncr) |
1 |
| |
Protists |
|
1 |
| |
|
Dictyostelium discoideum (ddi) |
1 |
| NULL |
|
|
51 |
| TOTAL |
|
|
2554 |
![[space]](http://homer.ornl.gov/compbio/public/images/bluespacer.gif){kind=small}
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