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Transcription

COG Name Group Contig Gene COG ID Score Evalue
Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component K AL954747 NE0076 COG4219 36 0.006
AraC-type DNA-binding domain-containing protein K AL954747 NE0722 COG2207 64 2e-11
AraC-type DNA-binding domain-containing protein K AL954747 NE2507 COG2207 73 2e-14
AraC-type DNA-binding domain-containing protein K AL954747 NE2511 COG2207 73 2e-14

BASAL TRANSCRIPTION FACTORS

COG Name Group Contig Gene COG ID Score Evalue
Transcription antiterminator K AL954747 NE0468 COG0250 87 6e-19
Transcription antiterminator K AL954747 NE2051 COG0250 203 7e-54
Transcription elongation factor K AL954747 NE0760 COG0195 183 3e-47
Transcription elongation factor K AL954747 NE1660 COG0782 167 5e-43
Transcription elongation factor K AL954747 NE1848 COG0782 148 2e-37
Transcription elongation factor K AL954747 NE2130 COG0782 88 2e-19
Transcription termination factor K AL954747 NE0204 COG1158 38 0.003
Transcription termination factor K AL954747 NE0206 COG1158 52 9e-08
Transcription termination factor K AL954747 NE1035 COG1158 696 0.0
Transcription termination factor K AL954747 NE1972 COG0781 38 0.001
Transcription termination factor K AL954747 NE2086 COG1158 80 5e-16
Transcription termination factor K AL954747 NE2558 COG0781 138 2e-34
COG Name Group Contig Gene COG ID Score Evalue
Biotin operon repressor K AL954747 NE2460 COG1654 49 5e-07
Cold shock protein K AL954747 NE0717 COG1278 51 6e-08
Cold shock protein K AL954747 NE1312 COG1278 109 4e-26
Cold shock protein K AL954747 NE1731 COG1278 109 5e-26
DNA-binding winged-HTH domains K AL954747 NE0344 COG3710 54 1e-08
DNA-binding winged-HTH domains K AL954747 NE0514 COG3710 52 4e-08
DNA-binding winged-HTH domains K AL954747 NE0667 COG3710 50 2e-07
DNA-binding winged-HTH domains K AL954747 NE0729 COG3710 60 2e-10
DNA-binding winged-HTH domains K AL954747 NE0937 COG3710 61 8e-11
DNA-binding winged-HTH domains K AL954747 NE1409 COG3710 57 2e-09
DNA-binding winged-HTH domains K AL954747 NE1994 COG3710 36 0.007
DNA-binding winged-HTH domains K AL954747 NE2131 COG3710 63 2e-11

DNA-DEPENDENT RNA POLYMERASE SUBUNITS

COG Name Group Contig Gene COG ID Score Evalue
DNA-directed RNA polymerase alpha subunit/40 kD subunit K AL954747 NE0426 COG0202 330 7e-92
DNA-directed RNA polymerase beta subunit/140 kD subunit K AL954747 NE2046 COG0085 735 0.0
DNA-directed RNA polymerase beta' subunit/160 kD subunit K AL954747 NE2045 COG0086 876 0.0
DNA-directed RNA polymerase sigma subunit (sigma70/sigma32) K AL954747 NE0229 COG0568 336 3e-93
DNA-directed RNA polymerase sigma subunit (sigma70/sigma32) K AL954747 NE0533 COG0568 35 0.004
DNA-directed RNA polymerase sigma subunit (sigma70/sigma32) K AL954747 NE0584 COG0568 223 1e-59
DNA-directed RNA polymerase sigma subunit (sigma70/sigma32) K AL954747 NE2491 COG0568 91 6e-20
DNA-directed RNA polymerase specialized sigma subunit K AL954747 NE0229 COG1191 108 1e-24
DNA-directed RNA polymerase specialized sigma subunit K AL954747 NE0533 COG1191 36 0.001
DNA-directed RNA polymerase specialized sigma subunit K AL954747 NE0547 COG1191 35 0.003
DNA-directed RNA polymerase specialized sigma subunit K AL954747 NE0554 COG1191 40 1e-04
DNA-directed RNA polymerase specialized sigma subunit K AL954747 NE0557 COG1191 38 5e-04
DNA-directed RNA polymerase specialized sigma subunit K AL954747 NE0584 COG1191 103 2e-23
DNA-directed RNA polymerase specialized sigma subunit K AL954747 NE0818 COG1191 41 3e-05
DNA-directed RNA polymerase specialized sigma subunit K AL954747 NE0917 COG1191 40 1e-04
DNA-directed RNA polymerase specialized sigma subunit K AL954747 NE1041 COG1191 43 1e-05
DNA-directed RNA polymerase specialized sigma subunit K AL954747 NE1101 COG1191 38 4e-04
DNA-directed RNA polymerase specialized sigma subunit K AL954747 NE1192 COG1191 37 7e-04
DNA-directed RNA polymerase specialized sigma subunit K AL954747 NE1992 COG1191 41 6e-05
DNA-directed RNA polymerase specialized sigma subunit K AL954747 NE2138 COG1191 38 3e-04
DNA-directed RNA polymerase specialized sigma subunit K AL954747 NE2331 COG1191 35 0.003
DNA-directed RNA polymerase specialized sigma subunit K AL954747 NE2491 COG1191 194 4e-51
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K AL954747 NE0128 COG1595 96 1e-21
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K AL954747 NE0533 COG1595 87 9e-19
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K AL954747 NE0541 COG1595 85 3e-18
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K AL954747 NE0547 COG1595 94 8e-21
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K AL954747 NE0554 COG1595 103 9e-24
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K AL954747 NE0557 COG1595 96 3e-21
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K AL954747 NE0818 COG1595 97 6e-22
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K AL954747 NE0917 COG1595 85 3e-18
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K AL954747 NE0980 COG1595 91 5e-20
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K AL954747 NE1041 COG1595 83 9e-18
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K AL954747 NE1071 COG1595 97 9e-22
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K AL954747 NE1079 COG1595 109 1e-25
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K AL954747 NE1086 COG1595 102 1e-23
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K AL954747 NE1096 COG1595 102 2e-23
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K AL954747 NE1099 COG1595 113 7e-27
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K AL954747 NE1101 COG1595 105 2e-24
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K AL954747 NE1192 COG1595 93 8e-21
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K AL954747 NE1217 COG1595 86 1e-18
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K AL954747 NE1617 COG1595 92 3e-20
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K AL954747 NE1992 COG1595 101 3e-23
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K AL954747 NE2138 COG1595 98 3e-22
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K AL954747 NE2331 COG1595 137 5e-34
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K AL954747 NE2435 COG1595 100 1e-22
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K AL954747 NE2486 COG1595 112 3e-26
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K AL954747 NE2491 COG1595 39 3e-04
DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog K AL954747 NE0062 COG1508 412 1.0e-116
DNA-directed RNA polymerase subunit E' K AL954747 NE0172 COG1095 39 0.001
DNA-directed RNA polymerase subunit E' K AL954747 NE0350 COG1095 52 1e-07
DNA-directed RNA polymerase subunit E' K AL954747 NE1962 COG1095 39 9e-04
DNA-directed RNA polymerase subunit E' K AL954747 NE2197 COG1095 40 8e-04
DNA-directed RNA polymerase subunit K/omega K AL954747 NE2255 COG1758 55 2e-09
COG Name Group Contig Gene COG ID Score Evalue
DNA helicase TIP49 TBP-interacting protein K AL954747 NE0193 COG1224 36 0.005
DNA helicase TIP49 TBP-interacting protein K AL954747 NE0213 COG1224 44 1e-05
DNA helicase TIP49 TBP-interacting protein K AL954747 NE0433 COG1224 43 8e-05
DNA helicase TIP49 TBP-interacting protein K AL954747 NE0528 COG1224 51 4e-07
DNA helicase TIP49 TBP-interacting protein K AL954747 NE0906 COG1224 55 2e-08
DNA helicase TIP49 TBP-interacting protein K AL954747 NE1053 COG1224 36 0.004
DNA or RNA helicase of superfamily II K AL954747 NE0008 COG1061 67 5e-12
DNA or RNA helicase of superfamily II K AL954747 NE0093 COG1061 49 4e-06
DNA or RNA helicase of superfamily II K AL954747 NE0382 COG1061 46 1e-05
DNA or RNA helicase of superfamily II K AL954747 NE0785 COG1061 57 4e-09
DNA or RNA helicase of superfamily II K AL954747 NE0834 COG1061 49 1e-06
DNA or RNA helicase of superfamily II K AL954747 NE1505 COG1061 40 4e-04
DNA or RNA helicase of superfamily II K AL954747 NE1807 COG1061 71 2e-13
DNA or RNA helicase of superfamily II K AL954747 NE1850 COG1061 67 6e-12
DNA or RNA helicase of superfamily II K AL954747 NE2040 COG1061 67 4e-12
DNA or RNA helicase of superfamily II K AL954747 NE2306 COG1061 58 3e-09
DNA or RNA helicase of superfamily II K AL954747 NE2311 COG1061 56 1e-08
DNA or RNA helicase of superfamily II K AL954747 NE2499 COG1061 119 8e-28
DNA or RNA helicase of superfamily II K AL954747 NE2520 COG1061 69 8e-13
DNA or RNA helicase of superfamily II K AL954747 NE2527 COG1061 60 9e-10
DNA or RNA helicase of superfamily II K AL954747 NE2564 COG1061 45 1e-05
dsRNA-specific ribonuclease K AL954747 NE2324 COG0571 238 3e-64
Exoribonuclease II K AL954747 NE0350 COG4776 265 9e-72
Exoribonuclease II K AL954747 NE1625 COG4776 101 1e-22
Exoribonuclease R K AL954747 NE0172 COG0557 37 0.004
Exoribonuclease R K AL954747 NE0350 COG0557 709 0.0
Exoribonuclease R K AL954747 NE1035 COG0557 35 0.008
Exoribonuclease R K AL954747 NE1625 COG0557 178 9e-46
Exoribonuclease R K AL954747 NE1962 COG0557 41 2e-04
Exoribonuclease R K AL954747 NE2197 COG0557 43 1e-04
Factor for inversion stimulation Fis transcriptional activator K AL954747 NE0875 COG2901 83 3e-18
Factor for inversion stimulation Fis transcriptional activator K AL954747 NE1124 COG2901 36 0.005
Guanosine polyphosphate pyrophosphohydrolase/synthetase K AL954747 NE0368 COG0317 816 0.0
Guanosine polyphosphate pyrophosphohydrolase/synthetase K AL954747 NE2369 COG0317 44 3e-05
Histone acetyltransferase K AL954747 NE0278 COG1243 43 4e-05
Histone acetyltransferase K AL954747 NE2335 COG1243 38 0.002
Histone chaperone involved in gene silencing K AL954747 NE0959 COG5137 35 0.005
Histone chaperone involved in gene silencing K AL954747 NE2336 COG5137 35 0.005
Negative regulator of flagellin synthesis (anti-sigma28 factor) K AL954747 NE2478 COG2747 46 7e-07
Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase K AL954747 NE1291 COG0378 37 0.002
Nucleosome binding factor SPN SPT16 subunit K AL954747 NE0275 COG5406 47 1e-06
Nucleosome binding factor SPN SPT16 subunit K AL954747 NE0959 COG5406 34 0.009
Nucleosome binding factor SPN SPT16 subunit K AL954747 NE2336 COG5406 34 0.009
Phage shock protein A (IM30) suppresses sigma54-dependent transcription K AL954747 NE1930 COG1842 38 0.004
Phage shock protein A (IM30) suppresses sigma54-dependent transcription K AL954747 NE2218 COG1842 38 8e-04
Predicted RNA polymerase sigma factor containing a TPR repeat domain K AL954747 NE0151 COG4941 36 0.003
Predicted RNA polymerase sigma factor containing a TPR repeat domain K AL954747 NE0533 COG4941 40 8e-05
Predicted RNA polymerase sigma factor containing a TPR repeat domain K AL954747 NE0557 COG4941 46 3e-06
Predicted RNA polymerase sigma factor containing a TPR repeat domain K AL954747 NE0980 COG4941 35 0.004
Predicted RNA polymerase sigma factor containing a TPR repeat domain K AL954747 NE1079 COG4941 50 1e-07
Predicted RNA polymerase sigma factor containing a TPR repeat domain K AL954747 NE1086 COG4941 34 0.008
Predicted RNA polymerase sigma factor containing a TPR repeat domain K AL954747 NE1096 COG4941 36 0.002
Predicted RNA polymerase sigma factor containing a TPR repeat domain K AL954747 NE1192 COG4941 40 1e-04
Predicted RNA polymerase sigma factor containing a TPR repeat domain K AL954747 NE1992 COG4941 38 3e-04
Predicted RNA polymerase sigma factor containing a TPR repeat domain K AL954747 NE2138 COG4941 35 0.004
Predicted RNA polymerase sigma factor containing a TPR repeat domain K AL954747 NE2331 COG4941 48 6e-07
Predicted RNA polymerase sigma factor containing a TPR repeat domain K AL954747 NE2435 COG4941 36 0.002
Predicted RNA polymerase sigma factor containing a TPR repeat domain K AL954747 NE2486 COG4941 45 5e-06
Predicted transcriptional regulator BolA superfamily protein K AL954747 NE0913 COG5007 60 6e-11
Predicted transcriptional regulator BolA superfamily protein K AL954747 NE2377 COG5007 83 4e-18
Predicted transcriptional regulator protein K AL954747 NE0263 COG4190 37 4e-04
Predicted transcriptional regulator protein K AL954747 NE0263 COG4742 33 0.007
Predicted transcriptional regulator protein K AL954747 NE0263 COG4189 35 0.002
Predicted transcriptional regulator protein K AL954747 NE1821 COG5340 136 2e-33
Predicted transcriptional regulator protein K AL954747 NE2090 COG5340 39 2e-04
Predicted transcriptional regulator protein K AL954747 NE2568 COG4742 33 0.008
Predicted transcriptional regulator protein K AL954747 NE2568 COG4189 41 3e-05
Predicted transcriptional regulator protein containing CBS domains K AL954747 NE0095 COG4109 53 3e-08
Predicted transcriptional regulator protein containing CBS domains K AL954747 NE0524 COG4109 41 2e-05
Predicted transcriptional regulator protein containing CBS domains K AL954747 NE0525 COG4109 44 3e-06
Predicted transcriptional regulator protein containing CBS domains K AL954747 NE1633 COG4109 35 0.009
Predicted transcriptional regulator protein containing CBS domains K AL954747 NE2227 COG4109 36 0.008
Predicted transcriptional regulator protein containing CBS domains K AL954747 NE2332 COG4109 40 2e-04
Predicted transcription regulator containing HTH domain K AL954747 NE0490 COG5499 32 0.008
Predicted transcription regulator containing HTH domain K AL954747 NE1587 COG5499 124 2e-30
Putative transcription activator K AL954747 NE1434 COG0819 35 0.004
Rad3-related DNA helicase K AL954747 NE0880 COG1199 456 1.0e-129
Rad3-related DNA helicase K AL954747 NE1807 COG1199 37 0.002
Rad3-related DNA helicase K AL954747 NE2564 COG1199 41 3e-04
RecG-like helicase K AL954747 NE0008 COG1200 366 1.0e-102
RecG-like helicase K AL954747 NE0093 COG1200 50 1e-06
RecG-like helicase K AL954747 NE0785 COG1200 43 7e-05
RecG-like helicase K AL954747 NE1505 COG1200 52 2e-07
RecG-like helicase K AL954747 NE1807 COG1200 57 3e-09
RecG-like helicase K AL954747 NE1850 COG1200 792 0.0
RecG-like helicase K AL954747 NE2040 COG1200 43 4e-05
RecG-like helicase K AL954747 NE2520 COG1200 42 1e-04
Regulators of stationary/sporulation gene expression K AL954747 NE0118 COG2002 37 3e-04
Regulators of stationary/sporulation gene expression K AL954747 NE0293 COG2002 42 7e-06
Regulators of stationary/sporulation gene expression K AL954747 NE1224 COG2002 37 2e-04
Regulators of stationary/sporulation gene expression K AL954747 NE1350 COG2002 43 4e-06
Regulators of stationary/sporulation gene expression K AL954747 NE1998 COG2002 36 7e-04
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K AL954747 NE0017 COG4567 73 3e-14
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K AL954747 NE0049 COG4567 40 0.001
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K AL954747 NE0344 COG4567 60 9e-11
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K AL954747 NE0514 COG4567 42 3e-05
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K AL954747 NE0566 COG4567 42 1e-04
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K AL954747 NE0667 COG4567 55 5e-09
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K AL954747 NE0729 COG4567 57 1e-09
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K AL954747 NE0937 COG4567 55 7e-09
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K AL954747 NE1007 COG4567 45 1e-06
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K AL954747 NE1124 COG4567 66 4e-12
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K AL954747 NE1250 COG4567 51 6e-07
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K AL954747 NE1313 COG4567 214 3e-57
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K AL954747 NE1409 COG4567 75 4e-15
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K AL954747 NE1700 COG4567 48 4e-06
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K AL954747 NE1859 COG4567 38 0.001
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K AL954747 NE1923 COG4567 45 2e-06
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K AL954747 NE1975 COG4567 61 1e-10
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K AL954747 NE2081 COG4567 68 1e-12
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K AL954747 NE2131 COG4567 44 1e-05
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K AL954747 NE0017 COG3437 81 1e-16
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K AL954747 NE0049 COG3437 67 7e-12
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K AL954747 NE0344 COG3437 83 1e-17
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K AL954747 NE0514 COG3437 76 2e-15
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K AL954747 NE0566 COG3437 69 7e-13
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K AL954747 NE0667 COG3437 79 2e-16
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K AL954747 NE0729 COG3437 71 5e-14
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K AL954747 NE0937 COG3437 87 1e-18
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K AL954747 NE1007 COG3437 83 7e-18
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K AL954747 NE1124 COG3437 43 6e-05
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K AL954747 NE1250 COG3437 73 1e-13
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K AL954747 NE1313 COG3437 55 3e-09
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K AL954747 NE1409 COG3437 86 3e-18
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K AL954747 NE1700 COG3437 46 1e-05
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K AL954747 NE1738 COG3437 38 0.001
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K AL954747 NE1836 COG3437 74 4e-15
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K AL954747 NE1859 COG3437 58 7e-10
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K AL954747 NE1923 COG3437 72 1e-14
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K AL954747 NE1975 COG3437 75 1e-14
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K AL954747 NE2081 COG3437 97 3e-21
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K AL954747 NE2131 COG3437 95 3e-21
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K AL954747 NE0017 COG2197 68 1e-12
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K AL954747 NE0049 COG2197 55 3e-08
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K AL954747 NE0080 COG2197 36 0.005
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K AL954747 NE0344 COG2197 87 8e-19
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K AL954747 NE0514 COG2197 72 5e-14
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K AL954747 NE0566 COG2197 63 3e-11
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K AL954747 NE0667 COG2197 82 3e-17
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K AL954747 NE0729 COG2197 70 2e-13
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K AL954747 NE0787 COG2197 41 1e-05
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K AL954747 NE0937 COG2197 75 4e-15
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K AL954747 NE1007 COG2197 70 6e-14
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K AL954747 NE1124 COG2197 67 3e-12
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K AL954747 NE1250 COG2197 66 3e-11
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K AL954747 NE1313 COG2197 63 2e-11
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K AL954747 NE1409 COG2197 85 5e-18
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K AL954747 NE1700 COG2197 66 1e-11
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K AL954747 NE1738 COG2197 46 9e-06
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K AL954747 NE1836 COG2197 70 8e-14
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K AL954747 NE1859 COG2197 79 4e-16
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K AL954747 NE1923 COG2197 78 2e-16
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K AL954747 NE1975 COG2197 77 3e-15
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K AL954747 NE1992 COG2197 40 7e-05
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K AL954747 NE2081 COG2197 79 6e-16
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K AL954747 NE2131 COG2197 82 3e-17
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K AL954747 NE2486 COG2197 36 0.002
Response regulator of citrate/malate metabolism K AL954747 NE0017 COG4565 46 8e-06
Response regulator of citrate/malate metabolism K AL954747 NE0049 COG4565 56 1e-08
Response regulator of citrate/malate metabolism K AL954747 NE0344 COG4565 70 1e-13
Response regulator of citrate/malate metabolism K AL954747 NE0514 COG4565 63 3e-11
Response regulator of citrate/malate metabolism K AL954747 NE0566 COG4565 73 3e-14
Response regulator of citrate/malate metabolism K AL954747 NE0667 COG4565 66 2e-12
Response regulator of citrate/malate metabolism K AL954747 NE0729 COG4565 58 7e-10
Response regulator of citrate/malate metabolism K AL954747 NE0937 COG4565 57 1e-09
Response regulator of citrate/malate metabolism K AL954747 NE1007 COG4565 49 9e-08
Response regulator of citrate/malate metabolism K AL954747 NE1124 COG4565 46 6e-06
Response regulator of citrate/malate metabolism K AL954747 NE1250 COG4565 47 2e-05
Response regulator of citrate/malate metabolism K AL954747 NE1313 COG4565 53 2e-08
Response regulator of citrate/malate metabolism K AL954747 NE1409 COG4565 73 2e-14
Response regulator of citrate/malate metabolism K AL954747 NE1700 COG4565 55 3e-08
Response regulator of citrate/malate metabolism K AL954747 NE1836 COG4565 49 1e-07
Response regulator of citrate/malate metabolism K AL954747 NE1859 COG4565 71 1e-13
Response regulator of citrate/malate metabolism K AL954747 NE1923 COG4565 59 1e-10
Response regulator of citrate/malate metabolism K AL954747 NE1975 COG4565 80 4e-16
Response regulator of citrate/malate metabolism K AL954747 NE2081 COG4565 71 1e-13
Response regulator of citrate/malate metabolism K AL954747 NE2131 COG4565 63 1e-11
Response regulator of citrate/malate metabolism K AL954747 NE2153 COG4565 41 1e-04
Response regulator of the LytR/AlgR family K AL954747 NE0017 COG3279 50 3e-07
Response regulator of the LytR/AlgR family K AL954747 NE0049 COG3279 44 7e-05
Response regulator of the LytR/AlgR family K AL954747 NE0344 COG3279 58 4e-10
Response regulator of the LytR/AlgR family K AL954747 NE0514 COG3279 52 5e-08
Response regulator of the LytR/AlgR family K AL954747 NE0566 COG3279 56 5e-09
Response regulator of the LytR/AlgR family K AL954747 NE0667 COG3279 49 2e-07
Response regulator of the LytR/AlgR family K AL954747 NE0729 COG3279 51 7e-08
Response regulator of the LytR/AlgR family K AL954747 NE0937 COG3279 55 4e-09
Response regulator of the LytR/AlgR family K AL954747 NE1007 COG3279 50 7e-08
Response regulator of the LytR/AlgR family K AL954747 NE1124 COG3279 53 5e-08
Response regulator of the LytR/AlgR family K AL954747 NE1250 COG3279 51 7e-07
Response regulator of the LytR/AlgR family K AL954747 NE1313 COG3279 45 2e-06
Response regulator of the LytR/AlgR family K AL954747 NE1409 COG3279 63 2e-11
Response regulator of the LytR/AlgR family K AL954747 NE1700 COG3279 42 2e-04
Response regulator of the LytR/AlgR family K AL954747 NE1836 COG3279 48 3e-07
Response regulator of the LytR/AlgR family K AL954747 NE1859 COG3279 67 2e-12
Response regulator of the LytR/AlgR family K AL954747 NE1923 COG3279 47 4e-07
Response regulator of the LytR/AlgR family K AL954747 NE1975 COG3279 54 2e-08
Response regulator of the LytR/AlgR family K AL954747 NE2081 COG3279 56 7e-09
Response regulator of the LytR/AlgR family K AL954747 NE2131 COG3279 49 3e-07
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K AL954747 NE0017 COG0745 87 3e-18
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K AL954747 NE0049 COG0745 78 3e-15
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K AL954747 NE0344 COG0745 204 4e-54
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K AL954747 NE0514 COG0745 214 5e-57
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K AL954747 NE0566 COG0745 69 7e-13
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K AL954747 NE0667 COG0745 196 1e-51
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K AL954747 NE0729 COG0745 173 1e-44
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K AL954747 NE0937 COG0745 163 1e-41
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K AL954747 NE1007 COG0745 89 8e-20
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K AL954747 NE1124 COG0745 52 8e-08
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K AL954747 NE1250 COG0745 80 2e-15
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K AL954747 NE1313 COG0745 73 1e-14
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K AL954747 NE1409 COG0745 211 3e-56
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K AL954747 NE1700 COG0745 62 3e-10
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K AL954747 NE1738 COG0745 43 4e-05
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K AL954747 NE1836 COG0745 92 1e-20
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K AL954747 NE1859 COG0745 62 6e-11
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K AL954747 NE1923 COG0745 83 5e-18
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K AL954747 NE1975 COG0745 96 4e-21
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K AL954747 NE2081 COG0745 94 2e-20
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K AL954747 NE2131 COG0745 220 8e-59
Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain K AL954747 NE0017 COG4650 159 5e-40
Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain K AL954747 NE1053 COG4650 40 4e-04
Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain K AL954747 NE1124 COG4650 130 1e-31
Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain K AL954747 NE1919 COG4650 39 3e-04
Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain K AL954747 NE1975 COG4650 60 4e-10
Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain K AL954747 NE2005 COG4650 36 0.003
Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain K AL954747 NE2081 COG4650 139 5e-34
Superfamily II DNA and RNA helicase K AL954747 NE0008 COG0513 74 5e-14
Superfamily II DNA and RNA helicase K AL954747 NE0093 COG0513 112 3e-25
Superfamily II DNA and RNA helicase K AL954747 NE0785 COG0513 72 1e-13
Superfamily II DNA and RNA helicase K AL954747 NE0833 COG0513 41 8e-04
Superfamily II DNA and RNA helicase K AL954747 NE0834 COG0513 47 6e-06
Superfamily II DNA and RNA helicase K AL954747 NE0880 COG0513 37 0.005
Superfamily II DNA and RNA helicase K AL954747 NE1505 COG0513 45 2e-05
Superfamily II DNA and RNA helicase K AL954747 NE1807 COG0513 411 1.0e-116
Superfamily II DNA and RNA helicase K AL954747 NE1850 COG0513 72 1e-13
Superfamily II DNA and RNA helicase K AL954747 NE2040 COG0513 418 1.0e-118
Superfamily II DNA and RNA helicase K AL954747 NE2311 COG0513 67 8e-12
Superfamily II DNA and RNA helicase K AL954747 NE2520 COG0513 106 4e-24
Superfamily II DNA and RNA helicase K AL954747 NE2564 COG0513 102 5e-23
Superfamily II DNA/RNA helicase SNF2 family K AL954747 NE1807 COG0553 43 4e-05
Superfamily II DNA/RNA helicase SNF2 family K AL954747 NE2040 COG0553 43 5e-05
Superfamily II DNA/RNA helicase SNF2 family K AL954747 NE2311 COG0553 105 1e-23
TATA-binding protein-associated factor K AL954747 NE2402 COG5414 39 0.002
Transcriptional accessory protein K AL954747 NE0172 COG2183 63 7e-11
Transcriptional accessory protein K AL954747 NE0350 COG2183 41 4e-04
Transcriptional accessory protein K AL954747 NE0940 COG2183 56 5e-10
Transcriptional accessory protein K AL954747 NE1962 COG2183 78 2e-15
Transcriptional accessory protein K AL954747 NE2197 COG2183 950 0.0
Transcriptional activator of acetoin/glycerol metabolism K AL954747 NE0017 COG3284 275 5e-75
Transcriptional activator of acetoin/glycerol metabolism K AL954747 NE0032 COG3284 38 0.001
Transcriptional activator of acetoin/glycerol metabolism K AL954747 NE0528 COG3284 45 1e-05
Transcriptional activator of acetoin/glycerol metabolism K AL954747 NE0875 COG3284 38 2e-04
Transcriptional activator of acetoin/glycerol metabolism K AL954747 NE1124 COG3284 288 4e-79
Transcriptional activator of acetoin/glycerol metabolism K AL954747 NE1975 COG3284 130 2e-31
Transcriptional activator of acetoin/glycerol metabolism K AL954747 NE2005 COG3284 36 0.002
Transcriptional activator of acetoin/glycerol metabolism K AL954747 NE2081 COG3284 264 1e-71
Transcriptional antiterminator K AL954747 NE0186 COG4568 55 1e-09
Transcriptional antiterminator K AL954747 NE0257 COG3711 34 0.006
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain K AL954747 NE0722 COG4977 55 9e-09
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain K AL954747 NE2507 COG4977 163 2e-41
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain K AL954747 NE2511 COG4977 164 7e-42

TRANSCRIPTIONAL REGULATORS

COG Name Group Contig Gene COG ID Score Evalue
Mn-dependent transcriptional regulator protein K AL954747 NE0263 COG1321 35 0.002
Predicted transcriptional regulator protein K AL954747 NE0095 COG3620 53 5e-08
Predicted transcriptional regulator protein K AL954747 NE0095 COG2524 69 8e-13
Predicted transcriptional regulator protein K AL954747 NE0189 COG2944 62 1e-11
Predicted transcriptional regulator protein K AL954747 NE0189 COG1709 38 2e-04
Predicted transcriptional regulator protein K AL954747 NE0189 COG1476 33 0.003
Predicted transcriptional regulator protein K AL954747 NE0263 COG0640 68 2e-13
Predicted transcriptional regulator protein K AL954747 NE0263 COG1777 36 7e-04
Predicted transcriptional regulator protein K AL954747 NE0263 COG2345 40 7e-05
Predicted transcriptional regulator protein K AL954747 NE0263 COG1497 61 2e-11
Predicted transcriptional regulator protein K AL954747 NE0318 COG2932 75 3e-15
Predicted transcriptional regulator protein K AL954747 NE0383 COG2865 159 6e-40
Predicted transcriptional regulator protein K AL954747 NE0490 COG1476 34 0.002
Predicted transcriptional regulator protein K AL954747 NE0524 COG3620 51 2e-08
Predicted transcriptional regulator protein K AL954747 NE0524 COG2524 73 9e-15
Predicted transcriptional regulator protein K AL954747 NE0525 COG3620 35 0.002
Predicted transcriptional regulator protein K AL954747 NE0525 COG2524 64 5e-12
Predicted transcriptional regulator protein K AL954747 NE0838 COG0789 55 2e-09
Predicted transcriptional regulator protein K AL954747 NE0843 COG0789 84 5e-18
Predicted transcriptional regulator protein K AL954747 NE0896 COG2944 41 9e-05
Predicted transcriptional regulator protein K AL954747 NE0896 COG1396 40 2e-04
Predicted transcriptional regulator protein K AL954747 NE0896 COG1395 36 0.003
Predicted transcriptional regulator protein K AL954747 NE0928 COG1959 132 1e-32
Predicted transcriptional regulator protein K AL954747 NE0951 COG0789 61 3e-11
Predicted transcriptional regulator protein K AL954747 NE1258 COG1475 48 2e-06
Predicted transcriptional regulator protein K AL954747 NE1304 COG1395 37 2e-04
Predicted transcriptional regulator protein K AL954747 NE1311 COG1396 34 0.003
Predicted transcriptional regulator protein K AL954747 NE1311 COG3620 42 1e-05
Predicted transcriptional regulator protein K AL954747 NE1311 COG1395 34 0.002
Predicted transcriptional regulator protein K AL954747 NE1311 COG1476 36 5e-04
Predicted transcriptional regulator protein K AL954747 NE1355 COG3636 97 4e-22
Predicted transcriptional regulator protein K AL954747 NE1452 COG1959 140 7e-35
Predicted transcriptional regulator protein K AL954747 NE1477 COG2524 44 1e-05
Predicted transcriptional regulator protein K AL954747 NE1519 COG2944 33 0.003
Predicted transcriptional regulator protein K AL954747 NE1519 COG3620 35 0.002
Predicted transcriptional regulator protein K AL954747 NE1617 COG1318 35 0.004
Predicted transcriptional regulator protein K AL954747 NE2153 COG3355 41 8e-05
Predicted transcriptional regulator protein K AL954747 NE2153 COG2345 105 4e-24
Predicted transcriptional regulator protein K AL954747 NE2332 COG2524 37 0.002
Predicted transcriptional regulator protein K AL954747 NE2398 COG3620 49 1e-07
Predicted transcriptional regulator protein K AL954747 NE2398 COG2524 47 6e-07
Predicted transcriptional regulator protein K AL954747 NE2473 COG1475 143 1e-35
Predicted transcriptional regulator protein K AL954747 NE2505 COG2865 36 0.005
Predicted transcriptional regulator protein K AL954747 NE2514 COG2378 66 4e-12
Predicted transcriptional regulator protein K AL954747 NE2519 COG2378 72 5e-14
Predicted transcriptional regulator protein K AL954747 NE2525 COG2865 203 2e-53
Predicted transcriptional regulator protein K AL954747 NE2537 COG1396 39 6e-05
Predicted transcriptional regulator protein K AL954747 NE2537 COG3620 32 0.008
Predicted transcriptional regulator protein K AL954747 NE2568 COG0640 60 6e-11
Predicted transcriptional regulator protein K AL954747 NE2568 COG1733 38 2e-04
Predicted transcriptional regulator protein consists of a Zn-ribbon and ATP-cone domains K AL954747 NE1432 COG1327 194 3e-51
Predicted transcriptional regulator protein containing the CopG/Arc/MetJ DNA-binding domain K AL954747 NE0262 COG3609 49 7e-08
Predicted transcriptional regulator protein containing the CopG/Arc/MetJ DNA-binding domain K AL954747 NE1524 COG3609 57 3e-10
Predicted transcriptional regulator protein containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain K AL954747 NE0475 COG0864 36 4e-04
Predicted transcriptional regulator protein containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain K AL954747 NE1580 COG0864 39 5e-05
Predicted transcriptional regulator protein containing the HTH domain K AL954747 NE1729 COG1386 167 4e-43
Putative transcriptional regulator protein K AL954747 NE1668 COG1678 203 6e-54
Putative transcriptional regulator protein K AL954747 NE2459 COG1521 137 7e-34
Transcriptional regulator K AL954747 NE0300 COG1309 38 7e-04
Transcriptional regulator K AL954747 NE0572 COG0583 143 2e-35
Transcriptional regulator K AL954747 NE0854 COG0583 160 1e-40
Transcriptional regulator K AL954747 NE1114 COG1309 59 2e-10
Transcriptional regulator K AL954747 NE1435 COG0583 134 9e-33
Transcriptional regulator K AL954747 NE1544 COG0583 157 1e-39
Transcriptional regulator K AL954747 NE1922 COG0583 165 5e-42
Transcriptional regulator K AL954747 NE1946 COG1309 59 2e-10
Transcriptional regulator K AL954747 NE2153 COG1414 35 0.004
Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains K AL954747 NE0017 COG3604 341 6e-95
Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains K AL954747 NE0193 COG3604 36 0.005
Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains K AL954747 NE0875 COG3604 36 7e-04
Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains K AL954747 NE1124 COG3604 363 1.0e-101
Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains K AL954747 NE1975 COG3604 135 4e-33
Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains K AL954747 NE2081 COG3604 333 1e-92
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K AL954747 NE0017 COG3829 351 7e-98
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K AL954747 NE0049 COG3829 40 0.001
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K AL954747 NE0193 COG3829 42 1e-04
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K AL954747 NE0528 COG3829 36 0.007
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K AL954747 NE0875 COG3829 41 1e-05
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K AL954747 NE1124 COG3829 374 1.0e-105
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K AL954747 NE1313 COG3829 41 4e-05
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K AL954747 NE1700 COG3829 45 2e-05
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K AL954747 NE1975 COG3829 151 1e-37
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K AL954747 NE2075 COG3829 55 4e-08
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K AL954747 NE2081 COG3829 363 1.0e-101
Transcriptional regulator contains sigma factor-related N-terminal domain K AL954747 NE0128 COG2390 36 0.002
Transcriptional regulator contains sigma factor-related N-terminal domain K AL954747 NE0547 COG2390 37 0.001
Transcriptional regulator contains sigma factor-related N-terminal domain K AL954747 NE0554 COG2390 36 0.001
Transcriptional regulator contains sigma factor-related N-terminal domain K AL954747 NE0557 COG2390 43 2e-05
Transcriptional regulator contains sigma factor-related N-terminal domain K AL954747 NE0980 COG2390 36 0.001
Transcriptional regulator contains sigma factor-related N-terminal domain K AL954747 NE1079 COG2390 34 0.004
Transcriptional regulator contains sigma factor-related N-terminal domain K AL954747 NE1086 COG2390 40 1e-04
Transcriptional regulator of aromatic amino acids metabolism K AL954747 NE0017 COG3283 229 5e-61
Transcriptional regulator of aromatic amino acids metabolism K AL954747 NE1124 COG3283 238 5e-64
Transcriptional regulator of aromatic amino acids metabolism K AL954747 NE1288 COG3283 36 0.005
Transcriptional regulator of aromatic amino acids metabolism K AL954747 NE1975 COG3283 118 1e-27
Transcriptional regulator of aromatic amino acids metabolism K AL954747 NE2081 COG3283 251 6e-68
Transcriptional regulator of heat shock gene K AL954747 NE1477 COG1420 290 1e-79
Transcriptional regulators K AL954747 NE0209 COG1737 45 1e-05
Transcriptional regulators K AL954747 NE0263 COG1846 37 5e-04
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K AL954747 NE0336 COG1167 90 2e-19
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K AL954747 NE0573 COG1167 43 8e-05
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K AL954747 NE0647 COG1167 78 7e-16
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K AL954747 NE0786 COG1167 122 5e-29
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K AL954747 NE1388 COG1167 41 2e-04
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K AL954747 NE1447 COG1167 48 1e-06
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K AL954747 NE2167 COG1167 43 3e-05
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K AL954747 NE2299 COG1167 55 8e-09
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K AL954747 NE2368 COG1167 122 5e-29
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K AL954747 NE2400 COG1167 107 1e-24
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K AL954747 NE2463 COG1167 118 5e-28
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K AL954747 NE0017 COG1221 261 8e-71
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K AL954747 NE0032 COG1221 39 5e-04
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K AL954747 NE0193 COG1221 48 2e-06
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K AL954747 NE0213 COG1221 40 2e-04
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K AL954747 NE0875 COG1221 38 9e-05
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K AL954747 NE1124 COG1221 260 1e-70
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K AL954747 NE1733 COG1221 39 0.001
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K AL954747 NE1975 COG1221 127 2e-30
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K AL954747 NE2081 COG1221 250 2e-67
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K AL954747 NE2261 COG1221 38 0.002
Transcriptional regulators of sugar metabolism K AL954747 NE0383 COG1349 39 6e-04
Transcriptional regulators of sugar metabolism K AL954747 NE1743 COG1349 37 0.001
Transcriptional regulators of sugar metabolism K AL954747 NE2110 COG1349 36 0.006
Transcriptional regulator/sugar kinase K AL954747 NE1694 COG1940 41 1e-04
COG Name Group Contig Gene COG ID Score Evalue
Transcription-repair coupling factor (superfamily II helicase) K AL954747 NE0008 COG1197 1344 0.0
Transcription-repair coupling factor (superfamily II helicase) K AL954747 NE0785 COG1197 129 6e-31
Transcription-repair coupling factor (superfamily II helicase) K AL954747 NE1505 COG1197 66 7e-12
Transcription-repair coupling factor (superfamily II helicase) K AL954747 NE1807 COG1197 39 6e-04
Transcription-repair coupling factor (superfamily II helicase) K AL954747 NE1850 COG1197 354 2e-98
Transcription-repair coupling factor (superfamily II helicase) K AL954747 NE2040 COG1197 36 0.006

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