Cell Envelope Biogenesis, Outer Membrane

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
ABC-type polysaccharide/polyol phosphate export systems permease component	M	BX950229	MMP0165	COG1682	51	1e-07
ABC-type polysaccharide/polyol phosphate transport system ATPase component	M	BX950229	MMP0110	COG1134	111	6e-26
ABC-type polysaccharide/polyol phosphate transport system ATPase component	M	BX950229	MMP0167	COG1134	135	4e-33
ABC-type polysaccharide/polyol phosphate transport system ATPase component	M	BX950229	MMP0198	COG1134	75	5e-15
ABC-type polysaccharide/polyol phosphate transport system ATPase component	M	BX950229	MMP0207	COG1134	83	5e-17
ABC-type polysaccharide/polyol phosphate transport system ATPase component	M	BX950229	MMP0229	COG1134	119	2e-28
ABC-type polysaccharide/polyol phosphate transport system ATPase component	M	BX950229	MMP0272	COG1134	47	1e-06
ABC-type polysaccharide/polyol phosphate transport system ATPase component	M	BX950229	MMP0382	COG1134	82	1e-16
ABC-type polysaccharide/polyol phosphate transport system ATPase component	M	BX950229	MMP0504	COG1134	92	5e-20
ABC-type polysaccharide/polyol phosphate transport system ATPase component	M	BX950229	MMP0523	COG1134	104	6e-24
ABC-type polysaccharide/polyol phosphate transport system ATPase component	M	BX950229	MMP0620	COG1134	100	3e-22
ABC-type polysaccharide/polyol phosphate transport system ATPase component	M	BX950229	MMP0635	COG1134	98	6e-22
ABC-type polysaccharide/polyol phosphate transport system ATPase component	M	BX950229	MMP0729	COG1134	39	0.002
ABC-type polysaccharide/polyol phosphate transport system ATPase component	M	BX950229	MMP0868	COG1134	108	6e-25
ABC-type polysaccharide/polyol phosphate transport system ATPase component	M	BX950229	MMP1098	COG1134	87	1e-18
ABC-type polysaccharide/polyol phosphate transport system ATPase component	M	BX950229	MMP1168	COG1134	56	2e-09
ABC-type polysaccharide/polyol phosphate transport system ATPase component	M	BX950229	MMP1183	COG1134	93	2e-20
ABC-type polysaccharide/polyol phosphate transport system ATPase component	M	BX950229	MMP1198	COG1134	97	1e-21
ABC-type polysaccharide/polyol phosphate transport system ATPase component	M	BX950229	MMP1484	COG1134	108	5e-25
ABC-type polysaccharide/polyol phosphate transport system ATPase component	M	BX950229	MMP1518	COG1134	96	3e-21
ABC-type polysaccharide/polyol phosphate transport system ATPase component	M	BX950229	MMP1630	COG1134	100	3e-22
ABC-type polysaccharide/polyol phosphate transport system ATPase component	M	BX950229	MMP1649	COG1134	98	1e-21
ABC-type transport system involved in lipoprotein release permease component	M	BX950229	MMP0521	COG4591	103	3e-23
ABC-type transport system involved in lipoprotein release permease component	M	BX950229	MMP0634	COG4591	133	1e-32
ABC-type transport system involved in lipoprotein release permease component	M	BX950229	MMP0871	COG4591	121	7e-29
ADP-heptose synthase bifunctional sugar kinase/adenylyltransferase	M	BX950229	MMP0418	COG2870	71	9e-14
ADP-heptose synthase bifunctional sugar kinase/adenylyltransferase	M	BX950229	MMP0943	COG2870	81	5e-17
ADP-heptose synthase bifunctional sugar kinase/adenylyltransferase	M	BX950229	MMP1093	COG2870	40	6e-05
ADP-heptose synthase bifunctional sugar kinase/adenylyltransferase	M	BX950229	MMP1639	COG2870	38	0.002
Alanine racemase	M	BX950229	MMP1512	COG0787	388	1.0e-109
Aspartate racemase	M	BX950229	MMP0739	COG1794	279	1e-76
CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes	M	BX950229	MMP0545	COG4750	40	6e-04
CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes	M	BX950229	MMP0915	COG4750	52	2e-08
CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes	M	BX950229	MMP1076	COG4750	65	1e-11
CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes	M	BX950229	MMP1091	COG4750	65	5e-12
Cyclopropane fatty acid synthase and related methyltransferase	M	BX950229	MMP0054	COG2230	37	0.001
Cyclopropane fatty acid synthase and related methyltransferase	M	BX950229	MMP0102	COG2230	45	4e-06
Cyclopropane fatty acid synthase and related methyltransferase	M	BX950229	MMP0497	COG2230	36	0.002
Cyclopropane fatty acid synthase and related methyltransferase	M	BX950229	MMP0554	COG2230	38	4e-04
Cyclopropane fatty acid synthase and related methyltransferase	M	BX950229	MMP0685	COG2230	36	0.002
Cyclopropane fatty acid synthase and related methyltransferase	M	BX950229	MMP1179	COG2230	50	1e-07
Cyclopropane fatty acid synthase and related methyltransferase	M	BX950229	MMP1221	COG2230	45	2e-06
Cyclopropane fatty acid synthase and related methyltransferase	M	BX950229	MMP1307	COG2230	38	0.001
Cyclopropane fatty acid synthase and related methyltransferase	M	BX950229	MMP1339	COG2230	40	2e-04
Cyclopropane fatty acid synthase and related methyltransferase	M	BX950229	MMP1529	COG2230	35	0.006
Cyclopropane fatty acid synthase and related methyltransferase	M	BX950229	MMP1601	COG2230	40	2e-04
Cyclopropane fatty acid synthase and related methyltransferase	M	BX950229	MMP1717	COG2230	40	3e-04
Cytidylyltransferase	M	BX950229	MMP0943	COG0615	128	2e-31
Cytidylyltransferase	M	BX950229	MMP1093	COG0615	47	6e-07
D-alanine-D-alanine ligase and related ATP-grasp protein	M	BX950229	MMP0035	COG1181	37	0.002
D-alanine-D-alanine ligase and related ATP-grasp protein	M	BX950229	MMP0123	COG1181	63	3e-11
D-alanine-D-alanine ligase and related ATP-grasp protein	M	BX950229	MMP0170	COG1181	45	8e-06
D-alanine-D-alanine ligase and related ATP-grasp protein	M	BX950229	MMP0341	COG1181	76	5e-15
D-alanine-D-alanine ligase and related ATP-grasp protein	M	BX950229	MMP0392	COG1181	39	8e-04
D-alanine-D-alanine ligase and related ATP-grasp protein	M	BX950229	MMP0436	COG1181	63	3e-11
D-alanine-D-alanine ligase and related ATP-grasp protein	M	BX950229	MMP1013	COG1181	65	4e-11
D-alanine-D-alanine ligase and related ATP-grasp protein	M	BX950229	MMP1600	COG1181	56	3e-09
Dihydrodipicolinate synthase/N-acetylneuraminate lyase	M	BX950229	MMP0576	COG0329	317	6e-88
dTDP-4-dehydrorhamnose reductase	M	BX950229	MMP1090	COG1091	81	9e-17
dTDP-D-glucose 4 6-dehydratase	M	BX950229	MMP1090	COG1088	163	2e-41
dTDP-glucose pyrophosphorylase	M	BX950229	MMP0915	COG1209	57	8e-10
dTDP-glucose pyrophosphorylase	M	BX950229	MMP1076	COG1209	208	9e-55
dTDP-glucose pyrophosphorylase	M	BX950229	MMP1091	COG1209	164	9e-42
GDP-D-mannose dehydratase	M	BX950229	MMP1090	COG1089	109	2e-25
Glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains	M	BX950229	MMP0080	COG0449	50	2e-07
Glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains	M	BX950229	MMP0918	COG0449	74	2e-14
Glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains	M	BX950229	MMP1146	COG0449	161	1e-40
Glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains	M	BX950229	MMP1680	COG0449	625	1.0e-180
Glutamate racemase	M	BX950229	MMP0409	COG0796	36	0.004
Glutamate racemase	M	BX950229	MMP0739	COG0796	61	9e-11
Glycosyltransferase	M	BX950229	MMP0090	COG0438	155	4e-39
Glycosyltransferase	M	BX950229	MMP0356	COG0438	120	2e-28
Glycosyltransferase	M	BX950229	MMP1080	COG0438	74	2e-14
Glycosyltransferase	M	BX950229	MMP1088	COG0438	133	1e-32
Glycosyltransferase	M	BX950229	MMP1293	COG0438	184	8e-48
Glycosyltransferase	M	BX950229	MMP1294	COG0438	69	6e-13
Glycosyltransferase involved in cell wall biogenesis	M	BX950229	MMP0359	COG0463	67	9e-13
Glycosyltransferase involved in cell wall biogenesis	M	BX950229	MMP0590	COG0463	59	4e-10
Glycosyltransferase involved in cell wall biogenesis	M	BX950229	MMP1079	COG0463	77	2e-15
Glycosyltransferase involved in cell wall biogenesis	M	BX950229	MMP1170	COG0463	67	1e-12
Glycosyltransferase probably involved in cell wall biogenesis	M	BX950229	MMP0359	COG1215	63	2e-11
Glycosyltransferase probably involved in cell wall biogenesis	M	BX950229	MMP0590	COG1215	70	1e-13
Glycosyltransferase probably involved in cell wall biogenesis	M	BX950229	MMP1079	COG1215	62	4e-11
Glycosyltransferase probably involved in cell wall biogenesis	M	BX950229	MMP1170	COG1215	58	4e-10
L-alanine-DL-glutamate epimerase	M	BX950229	MMP0396	COG4948	54	2e-08

LIPID A BIOSYNTHESIS

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
CMP-2-keto-3-deoxyoctulosonic acid synthetase	M	BX950229	MMP0915	COG1212	36	0.001

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Mannose-1-phosphate guanylyltransferase	M	BX950229	MMP1076	COG0836	39	5e-04
Mannose-1-phosphate guanylyltransferase	M	BX950229	MMP1091	COG0836	46	4e-06
Membrane GTPase LepA	M	BX950229	MMP0284	COG0481	47	4e-06
Membrane GTPase LepA	M	BX950229	MMP1208	COG0481	64	1e-11
Membrane GTPase LepA	M	BX950229	MMP1336	COG0481	89	4e-19
Membrane GTPase LepA	M	BX950229	MMP1369	COG0481	122	8e-29
Membrane GTPase LepA	M	BX950229	MMP1370	COG0481	96	4e-21
Membrane GTPase LepA	M	BX950229	MMP1715	COG0481	36	0.002
N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains)	M	BX950229	MMP0049	COG1207	42	2e-05
N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains)	M	BX950229	MMP0350	COG1207	80	1e-16
N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains)	M	BX950229	MMP0915	COG1207	54	1e-08
N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains)	M	BX950229	MMP1076	COG1207	220	2e-58
N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains)	M	BX950229	MMP1091	COG1207	73	2e-14
N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains)	M	BX950229	MMP1355	COG1207	51	8e-08
Nucleoside-diphosphate-sugar epimerase	M	BX950229	MMP1090	COG0451	236	2e-63
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)	M	BX950229	MMP0049	COG1208	45	2e-06
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)	M	BX950229	MMP0350	COG1208	46	2e-06
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)	M	BX950229	MMP0915	COG1208	62	3e-11
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)	M	BX950229	MMP1076	COG1208	266	2e-72
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)	M	BX950229	MMP1091	COG1208	132	3e-32
Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)	M	BX950229	MMP0866	COG1732	51	1e-07
Periplasmic protease	M	BX950229	MMP0169	COG0793	44	2e-05
Periplasmic protein TonB links inner and outer membranes	M	BX950229	MMP1438	COG0810	36	0.004
Predicted membrane-associated Zn-dependent protease 1	M	BX950229	MMP0169	COG0750	59	6e-10
Predicted membrane-associated Zn-dependent protease 1	M	BX950229	MMP0453	COG0750	35	0.007
Predicted nucleoside-diphosphate-sugar epimerase	M	BX950229	MMP1090	COG0702	63	3e-11
Predicted nucleoside-diphosphate sugar epimerase	M	BX950229	MMP1090	COG1086	86	3e-18
Predicted phosphosugar isomerase	M	BX950229	MMP1680	COG2222	173	2e-44
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis	M	BX950229	MMP0096	COG0399	38	0.001
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis	M	BX950229	MMP0351	COG0399	436	1.0e-123
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis	M	BX950229	MMP1072	COG0399	56	4e-09
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis	M	BX950229	MMP1101	COG0399	48	1e-06
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis	M	BX950229	MMP1216	COG0399	44	2e-05
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis	M	BX950229	MMP1240	COG0399	37	0.002
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis	M	BX950229	MMP1574	COG0399	47	3e-06
Predicted S-adenosylmethionine-dependent methyltransferase involved in cell division	M	BX950229	MMP1179	COG0357	34	0.007
Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis	M	BX950229	MMP0149	COG0275	43	3e-05
Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein	M	BX950229	MMP0455	COG4623	67	2e-12
Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein	M	BX950229	MMP0550	COG4623	60	1e-10
Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein	M	BX950229	MMP0770	COG4623	52	5e-08
Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein	M	BX950229	MMP1224	COG4623	52	4e-08
Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein	M	BX950229	MMP1225	COG4623	71	1e-13
Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein	M	BX950229	MMP1632	COG4623	45	5e-06
Predicted sugar nucleotidyltransferase	M	BX950229	MMP0915	COG1213	53	1e-08
Predicted sugar nucleotidyltransferase	M	BX950229	MMP1076	COG1213	89	5e-19
Predicted sugar nucleotidyltransferase	M	BX950229	MMP1091	COG1213	60	2e-10
Predicted sugar phosphate isomerase involved in capsule formation	M	BX950229	MMP1680	COG0794	49	6e-07
Predicted UDP-glucose 6-dehydrogenase	M	BX950229	MMP0353	COG1004	230	2e-61
Predicted UDP-glucose 6-dehydrogenase	M	BX950229	MMP0706	COG1004	251	7e-68
Predicted UDP-glucose 6-dehydrogenase	M	BX950229	MMP1716	COG1004	39	5e-04
Putative cell wall-binding domain	M	BX950229	MMP0369	COG2247	66	9e-12
Putative cell wall-binding domain	M	BX950229	MMP0692	COG2247	95	5e-21
Putative cell wall-binding domain	M	BX950229	MMP0693	COG2247	95	6e-21
S-layer domain	M	BX950229	MMP0522	COG1361	116	4e-27
S-layer domain	M	BX950229	MMP0636	COG1361	102	3e-23
S-layer domain	M	BX950229	MMP1021	COG1361	168	1e-42
Small-conductance mechanosensitive channel	M	BX950229	MMP0264	COG0668	133	1e-32
Small-conductance mechanosensitive channel	M	BX950229	MMP0264	COG3264	122	3e-29
Small-conductance mechanosensitive channel	M	BX950229	MMP0534	COG0668	149	2e-37
Small-conductance mechanosensitive channel	M	BX950229	MMP0534	COG3264	139	4e-34
Small-conductance mechanosensitive channel	M	BX950229	MMP1397	COG3264	41	4e-04
Small-conductance mechanosensitive channel	M	BX950229	MMP1486	COG0668	144	6e-36
Small-conductance mechanosensitive channel	M	BX950229	MMP1486	COG3264	157	8e-40
Sortase and related acyltransferase	M	BX950229	MMP1184	COG1247	43	1e-05
Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase homolog	M	BX950229	MMP0915	COG1861	38	5e-04
Spore coat polysaccharide biosynthesis protein predicted glycosyltransferase	M	BX950229	MMP0403	COG3980	40	4e-04
UDP-galactopyranose mutase	M	BX950229	MMP0146	COG0562	44	2e-05
UDP-galactopyranose mutase	M	BX950229	MMP0388	COG0562	38	0.001
UDP-galactopyranose mutase	M	BX950229	MMP0768	COG0562	57	2e-09
UDP-galactopyranose mutase	M	BX950229	MMP1352	COG0562	36	0.002
UDP-glucose 4-epimerase	M	BX950229	MMP1090	COG1087	226	1e-60
UDP-glucose pyrophosphorylase	M	BX950229	MMP0915	COG1210	37	0.001
UDP-glucose pyrophosphorylase	M	BX950229	MMP1076	COG1210	147	9e-37
UDP-glucose pyrophosphorylase	M	BX950229	MMP1091	COG1210	348	3e-97
UDP-N-acetyl-D-mannosaminuronate dehydrogenase	M	BX950229	MMP0353	COG0677	430	1.0e-121
UDP-N-acetyl-D-mannosaminuronate dehydrogenase	M	BX950229	MMP0706	COG0677	465	1.0e-132
UDP-N-acetylglucosamine 2-epimerase	M	BX950229	MMP0357	COG0381	358	1.0e-100
UDP-N-acetylglucosamine 2-epimerase	M	BX950229	MMP0403	COG0381	36	0.003
UDP-N-acetylglucosamine 2-epimerase	M	BX950229	MMP0705	COG0381	379	1.0e-106
UDP-N-acetylglucosamine enolpyruvyl transferase	M	BX950229	MMP1205	COG0766	98	9e-22
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase	M	BX950229	MMP0090	COG0707	36	0.003
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase	M	BX950229	MMP0358	COG0707	39	6e-04
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase	M	BX950229	MMP0403	COG0707	108	8e-25
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase	M	BX950229	MMP0705	COG0707	36	0.005
UDP-N-acetylmuramate-alanine ligase	M	BX950229	MMP0173	COG0773	50	3e-07
UDP-N-acetylmuramoylalanine-D-glutamate ligase	M	BX950229	MMP0173	COG0771	51	2e-07
UDP-N-acetylmuramoylalanine-D-glutamate ligase	M	BX950229	MMP0706	COG0771	36	0.004
UDP-N-acetylmuramoylalanine-D-glutamate ligase	M	BX950229	MMP1352	COG0771	35	0.008
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase	M	BX950229	MMP1423	COG0472	96	2e-21
UDP-N-acetylmuramyl pentapeptide synthase	M	BX950229	MMP0173	COG0770	106	3e-24
UDP-N-acetylmuramyl tripeptide synthase	M	BX950229	MMP0173	COG0769	38	0.002
Uncharacterized protein involved in exopolysaccharide biosynthesis	M	BX950229	MMP1397	COG3206	39	0.003

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