| Kingdom |
Category |
Genus/Species |
Count |
|
|
|
215 |
| Archaea |
|
|
16 |
| |
|
|
215 |
| |
Crenarchaeota |
|
2 |
| |
|
Aeropyrum pernix (ape) |
1 |
| |
|
Thermoproteus neutrophilus (tne) |
1 |
| |
Euryarchaeota |
|
13 |
| |
|
Halobacterium salinarum R1 (hsl) |
1 |
| |
|
Methanosarcina acetivorans (mac) |
3 |
| |
|
Candidatus Methanoregula boonei (mbn) |
1 |
| |
|
Methanocorpusculum labreanum (mla) |
1 |
| |
|
Methanosarcina mazei (mma) |
1 |
| |
|
Pyrococcus furiosus (pfu) |
1 |
| |
|
Pyrococcus horikoshii (pho) |
1 |
| |
|
Uncultured methanogenic archaeon RC-I (rci) |
4 |
| |
Korarchaeota |
|
1 |
| |
|
Candidatus Korarchaeum cryptofilum (kcr) |
1 |
| Bacteria |
|
|
4225 |
| |
Acidobacteria |
|
6 |
| |
|
Acidobacteria bacterium (aba) |
3 |
| |
|
Solibacter usitatus (sus) |
3 |
| |
Actinobacteria |
|
3854 |
| |
|
Arthrobacter aurescens (aau) |
9 |
| |
|
Acidothermus cellulolyticus (ace) |
32 |
| |
|
Arthrobacter sp. FB24 (art) |
11 |
| |
|
Bifidobacterium adolescentis (bad) |
1 |
| |
|
Bifidobacterium longum DJO10A (blj) |
1 |
| |
|
Corynebacterium efficiens (cef) |
3 |
| |
|
Corynebacterium glutamicum ATCC 13032 (Bielefeld) (cgb) |
1 |
| |
|
Corynebacterium jeikeium (cjk) |
2 |
| |
|
Clavibacter michiganensis subsp. michiganensis (cmi) |
5 |
| |
|
Clavibacter michiganensis subsp. sepedonicus (cms) |
11 |
| |
|
Corynebacterium urealyticum (cur) |
1 |
| |
|
Frankia alni (fal) |
2954 |
| |
|
Kineococcus radiotolerans (kra) |
24 |
| |
|
Leifsonia xyli xyli CTCB07 (lxx) |
7 |
| |
|
Mycobacterium abscessus ATCC 19977T (mab) |
6 |
| |
|
Mycobacterium avium 104 (mav) |
7 |
| |
|
Mycobacterium bovis BCG Pasteur 1173P2 (mbb) |
11 |
| |
|
Mycobacterium gilvum (mgi) |
14 |
| |
|
Mycobacterium sp. JLS (mjl) |
7 |
| |
|
Mycobacterium sp. KMS (mkm) |
3 |
| |
|
Mycobacterium sp. MCS (mmc) |
1 |
| |
|
Mycobacterium marinum M (mmi) |
12 |
| |
|
Mycobacterium smegmatis (msm) |
10 |
| |
|
Mycobacterium ulcerans (mul) |
4 |
| |
|
Mycobacterium vanbaalenii (mva) |
22 |
| |
|
Nocardioides sp. JS614 (nca) |
33 |
| |
|
Nocardia farcinica (nfa) |
52 |
| |
|
Propionibacterium acnes (pac) |
2 |
| |
|
Rhodococcus sp. RHA1 (rha) |
60 |
| |
|
Rubrobacter xylanophilus (rxy) |
13 |
| |
|
Salinispora arenicola (saq) |
69 |
| |
|
Streptomyces coelicolor (sco) |
98 |
| |
|
Saccharopolyspora erythraea (sen) |
83 |
| |
|
Streptomyces griseus (sgr) |
74 |
| |
|
Streptomyces avermitilis (sma) |
106 |
| |
|
Salinispora tropica (stp) |
72 |
| |
|
Thermobifida fusca (tfu) |
33 |
| |
Bacteroides |
|
5 |
| |
|
Cytophaga hutchinsonii (chu) |
1 |
| |
|
Flavobacterium johnsoniae (fjo) |
1 |
| |
|
Gramella forsetii (gfo) |
1 |
| |
|
Porphyromonas gingivalis ATCC 33277 (pgn) |
1 |
| |
|
Salinibacter ruber (sru) |
1 |
| |
Chlamydia |
|
1 |
| |
|
Candidatus Protochlamydia amoebophila (pcu) |
1 |
| |
Cyanobacteria |
|
39 |
| |
|
Acaryochloris marina (amr) |
5 |
| |
|
Anabaena sp. PCC7120 (ana) |
2 |
| |
|
Anabaena variabilis (ava) |
2 |
| |
|
Cyanobacteria Yellowstone B-Prime (cyb) |
1 |
| |
|
Gloeobacter violaceus (gvi) |
6 |
| |
|
Microcystis aeruginosa (mar) |
3 |
| |
|
Nostoc punctiforme (npu) |
7 |
| |
|
Prochlorococcus marinus MIT 9303 (pmf) |
2 |
| |
|
Prochlorococcus marinus MIT9312 (pmi) |
1 |
| |
|
Synechococcus sp. CC9311 (syg) |
1 |
| |
|
Synechococcus sp. PCC7002 (syp) |
3 |
| |
|
Trichodesmium erythraeum (ter) |
6 |
| |
Deinococcus-Thermus |
|
3 |
| |
|
Deinococcus geothermalis (dge) |
2 |
| |
|
Deinococcus radiodurans (dra) |
1 |
| |
Firmicutes |
|
35 |
| |
|
Alkaliphilus metalliredigens (amt) |
1 |
| |
|
Bacillus cereus ATCC 10987 (bca) |
1 |
| |
|
Bacillus cereus ATCC 14579 (bce) |
1 |
| |
|
Bacillus licheniformis DSM13 (bld) |
2 |
| |
|
Bacillus subtilis (bsu) |
1 |
| |
|
Bacillus weihenstephanensis (bwe) |
1 |
| |
|
Clostridium kluyveri (ckl) |
1 |
| |
|
Clostridium phytofermentans (cpy) |
1 |
| |
|
Candidatus Desulforudis audaxviator (dau) |
1 |
| |
|
Desulfotomaculum reducens (drm) |
1 |
| |
|
Desulfitobacterium hafniense (dsy) |
3 |
| |
|
Geobacillus kaustophilus (gka) |
2 |
| |
|
Lactobacillus casei BL23 (lcb) |
2 |
| |
|
Moorella thermoacetica (mta) |
7 |
| |
|
Natranaerobius thermophilus (nth) |
3 |
| |
|
Oenococcus oeni (ooe) |
1 |
| |
|
Streptococcus suis 05ZYH33 (ssu) |
1 |
| |
|
Symbiobacterium thermophilum (sth) |
4 |
| |
|
Thermoanaerobacter pseudethanolicus (tpd) |
1 |
| |
Green nonsulfur bacteria |
|
26 |
| |
|
Chloroflexus aurantiacus (cau) |
6 |
| |
|
Dehalococcoides sp. CBDB1 (deh) |
1 |
| |
|
Dehalococcoides ethenogenes (det) |
1 |
| |
|
Herpetosiphon aurantiacus (hau) |
4 |
| |
|
Roseiflexus castenholzii DSM13941 (rca) |
9 |
| |
|
Roseiflexus sp. RS-1 (rrs) |
5 |
| |
Green sulfur bacteria |
|
5 |
| |
|
Chlorobium chlorochromatii (cch) |
1 |
| |
|
Chlorobium phaeobacteroides DSM 266 (cph) |
1 |
| |
|
Prosthecochloris aestuarii (paa) |
1 |
| |
|
Pelodictyon luteolum (plt) |
1 |
| |
|
Prosthecochloris vibrioformis (pvi) |
1 |
| |
Proteobacteria |
|
251 |
| |
|
Acidovorax avenae (aav) |
1 |
| |
|
Acidiphilium cryptum JF-5 (acr) |
1 |
| |
|
Anaeromyxobacter dehalogenans (ade) |
8 |
| |
|
Alkalilimnicola ehrlichei (aeh) |
1 |
| |
|
Anaeromyxobacter sp. Fw109-5 (afw) |
5 |
| |
|
Aeromonas hydrophila (aha) |
1 |
| |
|
Anaeromyxobacter sp. K (ank) |
1 |
| |
|
Aeromonas salmonicida (asa) |
1 |
| |
|
Azorhizobium caulinodans (azc) |
2 |
| |
|
Azoarcus sp. BH72 (azo) |
1 |
| |
|
Burkholderia ambifaria MC40-6 (bac) |
1 |
| |
|
Bdellovibrio bacteriovorus (bba) |
1 |
| |
|
Bradyrhizobium sp. BTAi1 (bbt) |
10 |
| |
|
Burkholderia cenocepacia HI2424 (bch) |
1 |
| |
|
Burkholderia cenocepacia MC0-3 (bcm) |
2 |
| |
|
Bradyrhizobium japonicum (bja) |
2 |
| |
|
Burkholderia mallei NCTC 10247 (bmn) |
1 |
| |
|
Burkholderia pseudomallei 668 (bpd) |
1 |
| |
|
Burkholderia phymatum (bph) |
4 |
| |
|
Burkholderia pseudomallei 1710b (bpm) |
4 |
| |
|
Burkholderia phytofirmans (bpy) |
3 |
| |
|
Bradyrhizobium sp. ORS278 (bra) |
2 |
| |
|
Burkholderia thailandensis (bte) |
1 |
| |
|
Burkholderia sp. 383 (bur) |
3 |
| |
|
Burkholderia vietnamiensis (bvi) |
1 |
| |
|
Burkholderia xenovorans (bxe) |
5 |
| |
|
Caulobacter sp. K31 (cak) |
2 |
| |
|
Cupriavidus taiwanensis (cti) |
3 |
| |
|
Delftia acidovorans (dac) |
1 |
| |
|
Dechloromonas aromatica (dar) |
1 |
| |
|
Candidatus Desulfococcus oleovorans (dol) |
1 |
| |
|
Dinoroseobacter shibae (dsh) |
2 |
| |
|
Desulfovibrio vulgaris Hildenborough (dvu) |
1 |
| |
|
Azoarcus sp. EbN1 (eba) |
3 |
| |
|
Erwinia carotovora (eca) |
1 |
| |
|
Enterobacter sakazakii (esa) |
1 |
| |
|
Granulobacter bethesdensis (gbe) |
1 |
| |
|
Geobacter bemidjiensis (gbm) |
1 |
| |
|
Gluconacetobacter diazotrophicus (gdi) |
2 |
| |
|
Geobacter lovleyi (glo) |
1 |
| |
|
Geobacter metallireducens (gme) |
2 |
| |
|
Geobacter sulfurreducens (gsu) |
1 |
| |
|
Geobacter uraniumreducens (gur) |
3 |
| |
|
Hahella chejuensis (hch) |
3 |
| |
|
Halorhodospira halophila (hha) |
1 |
| |
|
Helicobacter hepaticus (hhe) |
1 |
| |
|
Hyphomonas neptunium (hne) |
1 |
| |
|
Idiomarina loihiensis (ilo) |
1 |
| |
|
Jannaschia sp. CCS1 (jan) |
2 |
| |
|
Leptothrix cholodnii (lch) |
1 |
| |
|
Magnetospirillum magneticum (mag) |
2 |
| |
|
Marinobacter aquaeolei (maq) |
1 |
| |
|
Methylococcus capsulatus (mca) |
2 |
| |
|
Mesorhizobium sp. BNC1 (mes) |
2 |
| |
|
Methylobacterium sp. 4-46 (met) |
3 |
| |
|
Methylobacterium extorquens (mex) |
2 |
| |
|
Mesorhizobium loti (mlo) |
7 |
| |
|
Minibacterium massiliensis (mms) |
1 |
| |
|
Methylibium petroleiphilum (mpt) |
2 |
| |
|
Methylobacterium radiotolerans (mrd) |
7 |
| |
|
Myxococcus xanthus (mxa) |
4 |
| |
|
Novosphingobium aromaticivorans (nar) |
2 |
| |
|
Nitrosomonas eutropha (net) |
1 |
| |
|
Nitrosomonas europaea (neu) |
1 |
| |
|
Nitrobacter hamburgensis (nha) |
1 |
| |
|
Nitrosococcus oceani (noc) |
1 |
| |
|
Nitrobacter winogradskyi (nwi) |
1 |
| |
|
Pseudomonas aeruginosa PAO1 (pae) |
1 |
| |
|
Pseudomonas aeruginosa PA7 (pap) |
1 |
| |
|
Pseudomonas aeruginosa UCBPP-PA14 (pau) |
2 |
| |
|
Pseudomonas entomophila (pen) |
3 |
| |
|
Pseudomonas fluorescens Pf-5 (pfl) |
3 |
| |
|
Parvibaculum lavamentivorans (pla) |
3 |
| |
|
Photorhabdus luminescens (plu) |
1 |
| |
|
Pseudomonas mendocina (pmy) |
1 |
| |
|
Polaromonas naphthalenivorans (pna) |
6 |
| |
|
Polaromonas sp. JS666 (pol) |
5 |
| |
|
Pseudomonas putida KT2440 (ppu) |
1 |
| |
|
Pseudomonas putida W619 (ppw) |
1 |
| |
|
Pseudomonas stutzeri (psa) |
15 |
| |
|
Pseudomonas syringae pv. syringae B728a (psb) |
2 |
| |
|
Pseudomonas syringae pv. phaseolicola 1448A (psp) |
1 |
| |
|
Phenylobacterium zucineum (pzu) |
2 |
| |
|
Rickettsia bellii RML369-C (rbe) |
1 |
| |
|
Rhizobium etli CIAT 652 (rec) |
3 |
| |
|
Ralstonia eutropha H16 (reh) |
1 |
| |
|
Rhizobium etli CFN 42 (ret) |
1 |
| |
|
Ralstonia eutropha JMP134 (reu) |
2 |
| |
|
Rhizobium leguminosarum (rle) |
5 |
| |
|
Rhodopseudomonas palustris CGA009 (rpa) |
3 |
| |
|
Rhodopseudomonas palustris HaA2 (rpb) |
1 |
| |
|
Rhodopseudomonas palustris BisB18 (rpc) |
4 |
| |
|
Rhodopseudomonas palustris BisA53 (rpe) |
2 |
| |
|
Rhodopseudomonas palustris TIE-1 (rpt) |
1 |
| |
|
Rhodospirillum rubrum (rru) |
2 |
| |
|
Ralstonia solanacearum (rso) |
2 |
| |
|
Rhodobacter sphaeroides ATCC 17025 (rsq) |
2 |
| |
|
Syntrophus aciditrophicus (sat) |
2 |
| |
|
Shewanella amazonensis (saz) |
1 |
| |
|
Shewanella baltica OS185 (sbm) |
2 |
| |
|
Shewanella baltica OS195 (sbn) |
1 |
| |
|
Sorangium cellulosum (scl) |
12 |
| |
|
Shewanella denitrificans (sdn) |
1 |
| |
|
Syntrophobacter fumaroxidans (sfu) |
3 |
| |
|
Silicibacter pomeroyi (sil) |
1 |
| |
|
Shewanella woodyi ATCC51908 (swd) |
1 |
| |
|
Sphingomonas wittichii (swi) |
1 |
| |
|
Vibrio cholerae O395 (vco) |
1 |
| |
|
Vibrio parahaemolyticus (vpa) |
1 |
| |
|
Xanthomonas axonopodis (xac) |
1 |
| |
|
Xanthobacter autotrophicus (xau) |
2 |
| |
|
Xanthomonas oryzae PXO99A (xop) |
1 |
| |
|
Yersinia pestis Angola (ypg) |
1 |
| Eukaryotes |
|
|
43 |
| |
Animals |
|
24 |
| |
|
Aedes aegypti (yellow fever mosquito) (aag) |
1 |
| |
|
Bos taurus (cow) (bta) |
2 |
| |
|
Caenorhabditis briggsae (cbr) |
1 |
| |
|
Caenorhabditis elegans (nematode) (cel) |
3 |
| |
|
Canis familiaris (dog) (cfa) |
2 |
| |
|
Drosophila ananassae (dan) |
1 |
| |
|
Drosophila erecta (der) |
1 |
| |
|
Drosophila grimshawi (dgr) |
1 |
| |
|
Drosophila pseudoobscura (dpo) |
3 |
| |
|
Danio rerio (zebrafish) (dre) |
1 |
| |
|
Drosophila willistoni (dwi) |
1 |
| |
|
Macaca mulatta (rhesus monkey) (mcc) |
1 |
| |
|
Mus musculus (mouse) (mmu) |
2 |
| |
|
Ornithorhynchus anatinus (platypus) (oaa) |
1 |
| |
|
Strongylocentrotus purpuratus (purple sea urchin) (spu) |
1 |
| |
|
Sus scrofa (pig) (ssc) |
1 |
| |
|
Trichoplax adhaerens (tad) |
1 |
| |
Fungi |
|
10 |
| |
|
Aspergillus oryzae (aor) |
1 |
| |
|
Candida glabrata (cgr) |
1 |
| |
|
Fusarium graminearum (fgr) |
2 |
| |
|
Laccaria bicolor (lbc) |
1 |
| |
|
Magnaporthe grisea (mgr) |
2 |
| |
|
Ustilago maydis (uma) |
1 |
| |
|
Yarrowia lipolytica (yli) |
2 |
| |
Plants |
|
4 |
| |
|
Chlamydomonas reinhardtii (cre) |
2 |
| |
|
Physcomitrella patens subsp. patens (ppp) |
2 |
| |
Protists |
|
5 |
| |
|
Leishmania major (lma) |
1 |
| |
|
Monosiga brevicollis (mbr) |
2 |
| |
|
Trypanosoma brucei (tbr) |
1 |
| |
|
Trypanosoma cruzi (tcr) |
1 |
| NULL |
|
|
0 |
| TOTAL |
|
|
4499 |
![[space]](http://compbio.ornl.gov/public/images/bluespacer.gif){kind=small}
![[space]](http://maple.lsd.ornl.gov/common/images/bluespacer.gif){kind=small}