Genome Channel Computational Biosciences
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[space] Gene Channel • Generation Microbial Gene Prediction System • Grail (Microbial Gene Prediction System Internet Link) • GrailEXP • Genome Analysis Pipeline • DomainParser • PROSPECT (PROtein Structure Prediction and Evaluation Computer Toolkit) [space]
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Simple Repetitives

>Contig392.21.start2528891.end2528917
aaaaaaaagaaaatatgatatgataat

>Contig392.10.start1033792.end1033812
aaacacaaaaaaaacccataa

>Contig392.12.start1172735.end1172755
aaacacaaaaaaaacccataa

>Contig392.13.start1177866.end1177886
aaacacaaaaaaaacccataa

>Contig392.16.start2012571.end2012591
aaacacaaaaaaaacccataa

>Contig392.5.start546546.end546566
aaacacaaaaaaaacccataa

>Contig392.11.start1167654.end1167768
aaagaccggcacgatgaacatgaccatacacatgatcacaatcacgacca
tgatcacgaccatttacatgatcattctaacgatgagaacgaccgtcacg
gcgggaaagtcgcaa

>Contig392.23.start2607559.end2607669
aaagtaatttagagtttttattttttttatttacatcattaaaaatatct
attaaaaaatcatgatttttttgatatttaaaattcccgatatgtccgat
tacataattat

>Contig381.1.start2094.end2195
AAATGATTTTTAAAATCACAAAACTTGAAAAGAAAGAGGCAAATTAAAAT
ACACCTTAAAACCAAAAATGCACAAAACAGTGAAAAAGAGCATAAGGGGA
AA

>Contig392.19.start2289797.end2289822
aacataaaaaaattaaataaaaaaaa

>Contig392.8.start961001.end961189
aagaccaagcaagaccaagcaagaccaagcaagaccaagcaagaccaagc
aagaccaagcaagaccaagcaagaccaagcaagaccaagcaagaccaagc
aaggccaagcaagaccaagcaagaccaagcaagaccaagcaagaccaagc
aagaccaagcaagaccaagcaagaccagtaacaagtaca

>Contig392.4.start425072.end425099
agaaaaaaagataaaaaaaagagatcat

>Contig392.25.start2776763.end2776885
cctaaatccatcatctttctcaaactcccttttacttaatgttttttaat
tacttttagtaacctaaataagactataaactatcacttactaaaagtaa
atagatttgtttttgttcttttt

>Contig392.1.start23497.end23516
cctccacttctttttttttt

>Contig392.18.start2236488.end2236516
ccttcgcgtctttttttgttatttttttt

>Contig392.17.start2189614.end2189643
gacaaaaaaaaaaaaaaaaatcaatcgcac

>Contig392.3.start348719.end348821
gcgtcagttaatccggagaattcgtgatcagtttgttacgttgaatttga
ttgaatcgacatctatttcttctcctgattcttcgcgtcctgtccaagga
ttc

>Contig392.6.start638693.end638797
ggcggaggaaaaagaaaagtggaagaagattcacaaacaggcacaggcac
ggacgaaattaaaatatcaaaagcgatgatggaatgtagtaatgaaacga
acgac

>Contig392.14.start1207555.end1207577
taaaaaaaacctccaaaaaaaat

>Contig392.22.start2606427.end2606540
tgtagtatccttacaaaagttacaaatgtccaataaattaaaggtggaac
ttgatttctcaaatttaacagttctattctttttgtatagttttgaattt
cagaagtttctata

>Contig392.15.start1229422.end1229525
tgtttaaatattacaatattatttctataatgtttcgatattttatatta
tagagagcataaaatctattttaccttaatttaggaattttaattcttat
tgat

>Contig392.20.start2413589.end2413745
ttgtctttttgtctttttgtctttttgtctttttgtctttttgtcttttt
gtctttttgtctttttgtctttttgtctttttgtctttttgtctttttgt
ctttttgtctttttgtcttttacgttcttacgttcttacgttcttacgtt
ctcattc

>Contig392.7.start885171.end885201
tttgtttttttcttccttctctgtttttttt

>Contig392.9.start961491.end961511
ttttgtgtgtttatttttttt

>Contig392.24.start2612437.end2612464
tttttccggttattattatttttttttt

>Contig392.2.start107802.end107821
ttttttttacgctctttttt

Complex Repetitives

>Contig392.1.f.start705146.end705313.ACCN_LBPHIG1E/LBPHIGP49/PT4G1TRNA
tgtagtttagtggtaaaacctcagccttccaagctgatgatgagggttcg
attcccttcacccgcttttacctttttacaatctcattcaagaattatct
gattatgcgggtgtagtttagtggtaaaacctcagccttccaagctgatg
atgagagttcgattctct

>Contig392.2.f.start1760592.end1760620.ACCN_AF020713
ctttacgagctgcgcgttcacggacttcg

>Contig392.3.f.start2112057.end2112112.ACCN_ECOINTDLPT
gattcgaacccccgaccgacgccttagaagggcgttgctctatccagctg
agctat

>Contig392.4.f.start2789589.end2789658.ACCN_BHU24159/BPHS1ADNA
ggtgtgtcatgcaggattcgaacctgcgaccctctgattaaaagtcagat
gctctaccaactgagctaat

>Contig392.5.r.start2424083.end2424157.ACCN_LBPHIG1E/LBPHIGP49/PT4G1TRNA
cgttccgcgattttcttcgcatccggtttgtaggttccatcctgaatggc
ttgtcgaagagattcaattttttcg

>Contig392.6.r.start2881480.end2881536.ACCN_BHU24159/BPHS1ADNA
cgtttaaagagtgaatcagcaaacatcggaacaaccgttacagctacgat
caatgag

>Contig392.7.r.start2999026.end2999095.ACCN_BHU24159/BPHS1ADNA
tcatccccggtccaagcaacgtatcgatgccgtttttccggagttcgagc
ccagtcatctcaaataagtc

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