| Kingdom |
Category |
Genus/Species |
Count |
|
|
|
291 |
| Archaea |
|
|
10 |
| |
|
|
291 |
| |
Euryarchaeota |
|
10 |
| |
|
Archaeoglobus fulgidus (afu) |
1 |
| |
|
Haloarcula marismortui (hma) |
2 |
| |
|
Halobacterium salinarum R1 (hsl) |
1 |
| |
|
Haloquadratum walsbyi (hwa) |
1 |
| |
|
Methanosarcina acetivorans (mac) |
2 |
| |
|
Methanococcus maripaludis C6 (mmx) |
1 |
| |
|
Thermococcus kodakaraensis (tko) |
1 |
| |
|
Thermoplasma volcanium (tvo) |
1 |
| Bacteria |
|
|
2687 |
| |
Acidobacteria |
|
5 |
| |
|
Acidobacteria bacterium (aba) |
2 |
| |
|
Solibacter usitatus (sus) |
3 |
| |
Actinobacteria |
|
26 |
| |
|
Arthrobacter aurescens (aau) |
1 |
| |
|
Bifidobacterium longum DJO10A (blj) |
3 |
| |
|
Corynebacterium diphtheriae (cdi) |
2 |
| |
|
Corynebacterium efficiens (cef) |
1 |
| |
|
Clavibacter michiganensis subsp. michiganensis (cmi) |
2 |
| |
|
Clavibacter michiganensis subsp. sepedonicus (cms) |
1 |
| |
|
Kineococcus radiotolerans (kra) |
1 |
| |
|
Kocuria rhizophila (krh) |
1 |
| |
|
Mycobacterium marinum M (mmi) |
1 |
| |
|
Nocardia farcinica (nfa) |
2 |
| |
|
Propionibacterium acnes (pac) |
1 |
| |
|
Rhodococcus sp. RHA1 (rha) |
1 |
| |
|
Renibacterium salmoninarum (rsa) |
1 |
| |
|
Rubrobacter xylanophilus (rxy) |
2 |
| |
|
Salinispora arenicola (saq) |
2 |
| |
|
Saccharopolyspora erythraea (sen) |
3 |
| |
|
Streptomyces avermitilis (sma) |
1 |
| |
Bacteroides |
|
7 |
| |
|
Bacteroides vulgatus (bvu) |
2 |
| |
|
Cytophaga hutchinsonii (chu) |
1 |
| |
|
Flavobacterium johnsoniae (fjo) |
1 |
| |
|
Gramella forsetii (gfo) |
2 |
| |
|
Parabacteroides distasonis (pdi) |
1 |
| |
Cyanobacteria |
|
18 |
| |
|
Acaryochloris marina (amr) |
3 |
| |
|
Anabaena sp. PCC7120 (ana) |
1 |
| |
|
Anabaena variabilis (ava) |
3 |
| |
|
Cyanobacteria Yellowstone B-Prime (cyb) |
2 |
| |
|
Cyanothece sp. ATCC 51142 (cyt) |
1 |
| |
|
Gloeobacter violaceus (gvi) |
1 |
| |
|
Nostoc punctiforme (npu) |
2 |
| |
|
Synechococcus sp. CC9902 (sye) |
1 |
| |
|
Synechococcus elongatus PCC7942 (syf) |
1 |
| |
|
Synechococcus sp. RCC307 (syr) |
1 |
| |
|
Thermosynechococcus elongatus (tel) |
1 |
| |
|
Trichodesmium erythraeum (ter) |
1 |
| |
Deinococcus-Thermus |
|
4 |
| |
|
Deinococcus geothermalis (dge) |
1 |
| |
|
Deinococcus radiodurans (dra) |
2 |
| |
|
Thermus thermophilus HB8 (ttj) |
1 |
| |
Firmicutes |
|
2464 |
| |
|
Anoxybacillus flavithermus (afl) |
284 |
| |
|
Alkaliphilus metalliredigens (amt) |
8 |
| |
|
Alkaliphilus oremlandii (aoe) |
6 |
| |
|
Bacillus anthracis Ames 0581 (bar) |
1 |
| |
|
Bacillus anthracis Sterne (bat) |
26 |
| |
|
Bacillus amyloliquefaciens (bay) |
96 |
| |
|
Bacillus cereus ATCC 10987 (bca) |
89 |
| |
|
Bacillus cereus ATCC 14579 (bce) |
79 |
| |
|
Bacillus clausii (bcl) |
87 |
| |
|
Bacillus cereus subsp. cytotoxis NVH 391-98 (bcy) |
128 |
| |
|
Bacillus cereus ZK (bcz) |
48 |
| |
|
Bacillus halodurans (bha) |
231 |
| |
|
Bacillus licheniformis DSM13 (bld) |
116 |
| |
|
Bacillus licheniformis ATCC 14580 (bli) |
1 |
| |
|
Bacillus pumilus (bpu) |
107 |
| |
|
Bacillus subtilis (bsu) |
122 |
| |
|
Bacillus thuringiensis 97-27 (btk) |
33 |
| |
|
Bacillus thuringiensis Al Hakam (btl) |
75 |
| |
|
Bacillus weihenstephanensis (bwe) |
118 |
| |
|
Clostridium acetobutylicum (cac) |
5 |
| |
|
Clostridium botulinum B1 Okra (cbb) |
10 |
| |
|
Clostridium beijerinckii (cbe) |
13 |
| |
|
Clostridium botulinum F Langeland (cbf) |
4 |
| |
|
Clostridium botulinum A Hall (cbh) |
3 |
| |
|
Clostridium botulinum B Eklund 17B (cbk) |
5 |
| |
|
Clostridium botulinum A3 Loch Maree (cbl) |
2 |
| |
|
Clostridium botulinum E3 (cbt) |
6 |
| |
|
Clostridium difficile (cdf) |
5 |
| |
|
Carboxydothermus hydrogenoformans (chy) |
4 |
| |
|
Clostridium kluyveri (ckl) |
4 |
| |
|
Clostridium novyi (cno) |
4 |
| |
|
Clostridium perfringens 13 (cpe) |
1 |
| |
|
Clostridium perfringens ATCC 13124 (cpf) |
5 |
| |
|
Clostridium perfringens SM101 (cpr) |
7 |
| |
|
Clostridium phytofermentans (cpy) |
4 |
| |
|
Clostridium tetani E88 (ctc) |
2 |
| |
|
Clostridium thermocellum (cth) |
8 |
| |
|
Candidatus Desulforudis audaxviator (dau) |
1 |
| |
|
Desulfotomaculum reducens (drm) |
5 |
| |
|
Desulfitobacterium hafniense (dsy) |
11 |
| |
|
Enterococcus faecalis (efa) |
12 |
| |
|
Finegoldia magna (fma) |
1 |
| |
|
Geobacillus kaustophilus (gka) |
133 |
| |
|
Geobacillus thermodenitrificans (gtn) |
129 |
| |
|
Heliobacterium modesticaldum (hmo) |
3 |
| |
|
Lactobacillus brevis (lbr) |
2 |
| |
|
Lactobacillus delbrueckii ATCC BAA-365 (lbu) |
1 |
| |
|
Lactobacillus casei BL23 (lcb) |
2 |
| |
|
Leuconostoc citreum (lci) |
2 |
| |
|
Lactobacillus fermentum (lfe) |
1 |
| |
|
Lactobacillus helveticus (lhe) |
2 |
| |
|
Listeria innocua (lin) |
30 |
| |
|
Lactococcus lactis subsp. lactis IL1403 (lla) |
3 |
| |
|
Lactococcus lactis subsp. cremoris MG1363 (llm) |
1 |
| |
|
Leuconostoc mesenteroides (lme) |
2 |
| |
|
Listeria monocytogenes F2365 (lmf) |
13 |
| |
|
Listeria monocytogenes EGD-e (lmo) |
10 |
| |
|
Lactobacillus plantarum (lpl) |
5 |
| |
|
Lactobacillus reuteri F275 (Kitasato) (lrf) |
1 |
| |
|
Lactobacillus sakei (lsa) |
4 |
| |
|
Lactobacillus salivarius (lsl) |
6 |
| |
|
Lysinibacillus sphaericus (lsp) |
116 |
| |
|
Listeria welshimeri SLCC5334 (lwe) |
30 |
| |
|
Moorella thermoacetica (mta) |
2 |
| |
|
Natranaerobius thermophilus (nth) |
5 |
| |
|
Oceanobacillus iheyensis (oih) |
97 |
| |
|
Pediococcus pentosaceus (ppe) |
1 |
| |
|
Pelotomaculum thermopropionicum (pth) |
3 |
| |
|
Staphylococcus aureus RF122 (sab) |
2 |
| |
|
Staphylococcus aureus Newman (sae) |
5 |
| |
|
Staphylococcus aureus JH1 (sah) |
1 |
| |
|
Staphylococcus aureus MW2 (sam) |
1 |
| |
|
Staphylococcus aureus MRSA252 (sar) |
2 |
| |
|
Staphylococcus aureus MSSA476 (sas) |
3 |
| |
|
Staphylococcus epidermidis ATCC 12228 (sep) |
3 |
| |
|
Staphylococcus epidermidis RP62A (ser) |
5 |
| |
|
Streptococcus equi (sez) |
3 |
| |
|
Streptococcus gordonii (sgo) |
2 |
| |
|
Staphylococcus haemolyticus (sha) |
10 |
| |
|
Streptococcus mutans (smu) |
1 |
| |
|
Streptococcus pneumoniae Hungary19A 6 (spv) |
1 |
| |
|
Streptococcus pneumoniae CGSP14 (spw) |
2 |
| |
|
Streptococcus pneumoniae G54 (spx) |
1 |
| |
|
Staphylococcus saprophyticus (ssp) |
12 |
| |
|
Streptococcus suis 98HAH33 (ssv) |
1 |
| |
|
Streptococcus thermophilus LMD-9 (ste) |
4 |
| |
|
Symbiobacterium thermophilum (sth) |
7 |
| |
|
Streptococcus thermophilus LMG18311 (stl) |
1 |
| |
|
Thermoanaerobacter sp. X514 (tex) |
1 |
| |
|
Thermoanaerobacter pseudethanolicus (tpd) |
4 |
| |
|
Thermoanaerobacter tengcongensis (tte) |
11 |
| |
Green nonsulfur bacteria |
|
16 |
| |
|
Chloroflexus aurantiacus (cau) |
2 |
| |
|
Dehalococcoides sp. CBDB1 (deh) |
1 |
| |
|
Herpetosiphon aurantiacus (hau) |
9 |
| |
|
Roseiflexus castenholzii DSM13941 (rca) |
2 |
| |
|
Roseiflexus sp. RS-1 (rrs) |
2 |
| |
Green sulfur bacteria |
|
5 |
| |
|
Chlorobium chlorochromatii (cch) |
2 |
| |
|
Chlorobium phaeobacteroides BS1 (cpb) |
1 |
| |
|
Chloroherpeton thalassium (cts) |
1 |
| |
|
Prosthecochloris aestuarii (paa) |
1 |
| |
Hyperthermophilic bacteria |
|
10 |
| |
|
Aquifex aeolicus (aae) |
1 |
| |
|
Petrotoga mobilis (pmo) |
5 |
| |
|
Sulfurihydrogenibium sp. YO3AOP1 (sul) |
1 |
| |
|
Thermotoga lettingae (tle) |
1 |
| |
|
Thermotoga petrophila (tpt) |
1 |
| |
|
Thermodesulfovibrio yellowstonii (tye) |
1 |
| |
Planctomyces |
|
4 |
| |
|
Rhodopirellula baltica (rba) |
4 |
| |
Proteobacteria |
|
116 |
| |
|
Arcobacter butzleri (abu) |
2 |
| |
|
Alkalilimnicola ehrlichei (aeh) |
2 |
| |
|
Aeromonas hydrophila (aha) |
1 |
| |
|
Alteromonas macleodii (amc) |
2 |
| |
|
Anaeromyxobacter sp. K (ank) |
1 |
| |
|
Actinobacillus pleuropneumoniae AP76 (serotype 7) (apa) |
1 |
| |
|
Bordetella avium (bav) |
1 |
| |
|
Bradyrhizobium japonicum (bja) |
3 |
| |
|
Burkholderia phymatum (bph) |
2 |
| |
|
Burkholderia xenovorans (bxe) |
2 |
| |
|
Coxiella burnetii Dugway 5J108-111 (cbd) |
1 |
| |
|
Campylobacter curvus (ccv) |
1 |
| |
|
Citrobacter koseri ATCC BAA-895 (cko) |
1 |
| |
|
Colwellia psychrerythraea (cps) |
1 |
| |
|
Chromohalobacter salexigens (csa) |
1 |
| |
|
Chromobacterium violaceum (cvi) |
2 |
| |
|
Delftia acidovorans (dac) |
2 |
| |
|
Desulfovibrio desulfuricans (dde) |
1 |
| |
|
Desulfovibrio vulgaris DP4 (dvl) |
1 |
| |
|
Azoarcus sp. EbN1 (eba) |
2 |
| |
|
Erwinia carotovora (eca) |
1 |
| |
|
Escherichia coli APEC O1 (ecv) |
1 |
| |
|
Enterobacter sakazakii (esa) |
1 |
| |
|
Erwinia tasmaniensis (eta) |
2 |
| |
|
Francisella tularensis subsp. novicida U112 (ftn) |
1 |
| |
|
Geobacter metallireducens (gme) |
2 |
| |
|
Geobacter uraniumreducens (gur) |
1 |
| |
|
Hahella chejuensis (hch) |
3 |
| |
|
Haemophilus ducreyi (hdu) |
1 |
| |
|
Halorhodospira halophila (hha) |
1 |
| |
|
Hyphomonas neptunium (hne) |
1 |
| |
|
Helicobacter pylori J99 (hpj) |
1 |
| |
|
Haemophilus somnus 129PT (hso) |
1 |
| |
|
Jannaschia sp. CCS1 (jan) |
1 |
| |
|
Klebsiella pneumoniae 342 (kpe) |
1 |
| |
|
Legionella pneumophila Corby (lpc) |
1 |
| |
|
Magnetospirillum magneticum (mag) |
2 |
| |
|
Marinobacter aquaeolei (maq) |
1 |
| |
|
Methylobacterium sp. 4-46 (met) |
1 |
| |
|
Methylobacterium extorquens (mex) |
1 |
| |
|
Methylobacillus flagellatus (mfa) |
1 |
| |
|
Mesorhizobium loti (mlo) |
1 |
| |
|
Maricaulis maris (mmr) |
1 |
| |
|
Marinomonas sp. MWYL1 (mmw) |
2 |
| |
|
Methylobacterium populi (mpo) |
1 |
| |
|
Methylobacterium radiotolerans (mrd) |
1 |
| |
|
Myxococcus xanthus (mxa) |
2 |
| |
|
Nitrosospira multiformis (nmu) |
1 |
| |
|
Nitrosococcus oceani (noc) |
2 |
| |
|
Ochrobactrum anthropi (oan) |
1 |
| |
|
Pseudomonas aeruginosa PAO1 (pae) |
1 |
| |
|
Psychrobacter arcticum (par) |
1 |
| |
|
Pseudomonas aeruginosa UCBPP-PA14 (pau) |
1 |
| |
|
Psychrobacter cryohalolentis (pcr) |
1 |
| |
|
Pseudomonas fluorescens Pf-5 (pfl) |
1 |
| |
|
Psychromonas ingrahamii (pin) |
2 |
| |
|
Polynucleobacter necessarius (pne) |
1 |
| |
|
Pseudomonas putida GB-1 (ppg) |
1 |
| |
|
Photobacterium profundum (ppr) |
1 |
| |
|
Pseudomonas putida KT2440 (ppu) |
2 |
| |
|
Pseudomonas putida W619 (ppw) |
2 |
| |
|
Pseudomonas stutzeri (psa) |
1 |
| |
|
Rhodoferax ferrireducens (rfr) |
1 |
| |
|
Rhizobium leguminosarum (rle) |
1 |
| |
|
Ralstonia metallidurans (rme) |
1 |
| |
|
Ralstonia pickettii (rpi) |
2 |
| |
|
Rhodobacter sphaeroides 2.4.1 (rsp) |
1 |
| |
|
Sphingopyxis alaskensis (sal) |
1 |
| |
|
Syntrophus aciditrophicus (sat) |
2 |
| |
|
Sorangium cellulosum (scl) |
2 |
| |
|
Saccharophagus degradans (sde) |
1 |
| |
|
Shewanella denitrificans (sdn) |
1 |
| |
|
Shewanella sp. MR-4 (she) |
1 |
| |
|
Shewanella loihica (slo) |
1 |
| |
|
Stenotrophomonas maltophilia R551-3 (smt) |
1 |
| |
|
Shewanella oneidensis (son) |
1 |
| |
|
Serratia proteamaculans (spe) |
1 |
| |
|
Shewanella woodyi ATCC51908 (swd) |
2 |
| |
|
Thiomicrospira crunogena (tcx) |
1 |
| |
|
Vibrio cholerae O1 (vch) |
2 |
| |
|
Vibrio cholerae O395 (vco) |
2 |
| |
|
Vibrio fischeri MJ11 (vfm) |
2 |
| |
|
Vibrio harveyi (vha) |
1 |
| |
|
Vibrio vulnificus CMCP6 (vvu) |
2 |
| |
|
Vibrio vulnificus YJ016 (vvy) |
1 |
| |
|
Wolinella succinogenes (wsu) |
1 |
| |
|
Xanthomonas campestris pv. campestris B100 (xca) |
1 |
| |
Spirochete |
|
2 |
| |
|
Leptospira biflexa serovar Patoc Patoc 1 (Ames) (lbf) |
1 |
| |
|
Leptospira interrogans serovar Copenhageni (lic) |
1 |
| |
Synergistetes |
|
8 |
| |
|
Caldicellulosiruptor saccharolyticus (csc) |
2 |
| |
|
Syntrophomonas wolfei (swo) |
6 |
| |
Verrucomicrobia |
|
2 |
| |
|
Akkermansia muciniphila (amu) |
1 |
| |
|
Opitutus terrae (ote) |
1 |
| Eukaryotes |
|
|
31 |
| |
Animals |
|
11 |
| |
|
Aedes aegypti (yellow fever mosquito) (aag) |
1 |
| |
|
Canis familiaris (dog) (cfa) |
1 |
| |
|
Drosophila melanogaster (fruit fly) (dme) |
1 |
| |
|
Drosophila pseudoobscura (dpo) |
2 |
| |
|
Danio rerio (zebrafish) (dre) |
2 |
| |
|
Drosophila virilis (dvi) |
1 |
| |
|
Gallus gallus (chicken) (gga) |
1 |
| |
|
Mus musculus (mouse) (mmu) |
1 |
| |
|
Rattus norvegicus (rat) (rno) |
1 |
| |
Fungi |
|
2 |
| |
|
Aspergillus oryzae (aor) |
1 |
| |
|
Candida glabrata (cgr) |
1 |
| |
Plants |
|
1 |
| |
|
Physcomitrella patens subsp. patens (ppp) |
1 |
| |
Protists |
|
17 |
| |
|
Dictyostelium discoideum (ddi) |
2 |
| |
|
Entamoeba histolytica (ehi) |
1 |
| |
|
Monosiga brevicollis (mbr) |
2 |
| |
|
Plasmodium falciparum Dd2 (pfd) |
1 |
| |
|
Paramecium tetraurelia (ptm) |
5 |
| |
|
Tetrahymena thermophila (tet) |
3 |
| |
|
Trichomonas vaginalis (tva) |
3 |
| NULL |
|
|
0 |
| TOTAL |
|
|
3019 |
![[space]](http://compbio.ornl.gov/public/images/bluespacer.gif){kind=small}
![[space]](http://maple.lsd.ornl.gov/common/images/bluespacer.gif){kind=small}