Genome Channel Computational Biosciences
HomeAbout UsAnalysis ToolsInformation ResourcesProjects and Research
[space] Gene Channel • Generation Microbial Gene Prediction System • Grail (Microbial Gene Prediction System Internet Link) • GrailEXP • Genome Analysis Pipeline • DomainParser • PROSPECT (PROtein Structure Prediction and Evaluation Computer Toolkit) [space]
-

Transcription

COG Name Group Contig Gene COG ID Score Evalue
Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component K Contig392 Exig2593 COG4219 37 0.004
AraC-type DNA-binding domain-containing protein K Contig392 Exig0292 COG2207 64 1e-11
AraC-type DNA-binding domain-containing protein K Contig392 Exig0589 COG2207 101 7e-23
AraC-type DNA-binding domain-containing protein K Contig392 Exig1325 COG2207 88 8e-19
AraC-type DNA-binding domain-containing protein K Contig392 Exig2502 COG2207 91 1e-19

BASAL TRANSCRIPTION FACTORS

COG Name Group Contig Gene COG ID Score Evalue
DNA-directed RNA polymerase subunit M/Transcription elongation factor TFIIS K Contig392 Exig1888 COG1594 37 0.007
Predicted transcription factor homolog of eukaryotic MBF1 K Contig392 Exig1350 COG1813 35 8e-04
Predicted transcription factor homolog of eukaryotic MBF1 K Contig392 Exig1433 COG1813 38 1e-04
Predicted transcription factor homolog of eukaryotic MBF1 K Contig392 Exig2490 COG1813 38 6e-04
Predicted transcription factor homolog of eukaryotic MBF1 K Contig392 Exig2526 COG1813 36 0.001
Predicted transcription factor homolog of eukaryotic MBF1 K Contig392 Exig2580 COG1813 38 4e-04
Predicted transcription factor homolog of eukaryotic MBF1 K Contig392 Exig2909 COG1813 45 1e-06
Transcription antiterminator K Contig392 Exig0082 COG0250 169 9e-44
Transcription elongation factor K Contig392 Exig1840 COG0195 170 2e-43
Transcription elongation factor K Contig392 Exig2066 COG0782 150 3e-38
Transcription termination factor K Contig392 Exig0903 COG0781 120 3e-29
Transcription termination factor K Contig392 Exig1876 COG1158 90 2e-19
Transcription termination factor K Contig392 Exig1925 COG0781 76 5e-15
Transcription termination factor K Contig392 Exig2676 COG1158 59 6e-10
Transcription termination factor K Contig392 Exig2678 COG1158 40 4e-04
Transcription termination factor K Contig392 Exig2725 COG1158 609 1.0e-176
COG Name Group Contig Gene COG ID Score Evalue
Biotin operon repressor K Contig392 Exig1393 COG1654 34 0.007
Biotin operon repressor K Contig392 Exig1781 COG1654 64 1e-11
Cold shock protein K Contig392 Exig1684 COG1278 96 5e-22
Cold shock protein K Contig392 Exig1685 COG1278 99 7e-23
Cold shock protein K Contig392 Exig1686 COG1278 96 5e-22
Cold shock protein K Contig392 Exig1687 COG1278 99 7e-23
Cold shock protein K Contig392 Exig2428 COG1278 94 1e-21
Cold shock protein K Contig392 Exig2935 COG1278 90 3e-20
DNA-binding HTH domain-containing protein K Contig392 Exig0079 COG2771 34 0.010
DNA-binding HTH domain-containing protein K Contig392 Exig0599 COG2771 67 1e-12
DNA-binding HTH domain-containing protein K Contig392 Exig2468 COG2771 63 2e-11
DNA-binding winged-HTH domains K Contig392 Exig0515 COG3710 55 7e-09
DNA-binding winged-HTH domains K Contig392 Exig0644 COG3710 67 1e-12
DNA-binding winged-HTH domains K Contig392 Exig0723 COG3710 54 7e-09
DNA-binding winged-HTH domains K Contig392 Exig1016 COG3710 55 4e-09
DNA-binding winged-HTH domains K Contig392 Exig2177 COG3710 61 5e-11
DNA-binding winged-HTH domains K Contig392 Exig2204 COG3710 67 1e-12
DNA-binding winged-HTH domains K Contig392 Exig2451 COG3710 61 8e-11
DNA-binding winged-HTH domains K Contig392 Exig2494 COG3710 59 3e-10
DNA-binding winged-HTH domains K Contig392 Exig2605 COG3710 60 1e-10
DNA-binding winged-HTH domains K Contig392 Exig2692 COG3710 67 2e-12
DNA-binding winged-HTH domains K Contig392 Exig2843 COG3710 62 4e-11
DNA-binding winged-HTH domains K Contig392 Exig2886 COG3710 62 3e-11
DNA-binding winged-HTH domains K Contig392 Exig2929 COG3710 58 6e-10
DNA-binding winged-HTH domains K Contig392 Exig3031 COG3710 57 9e-10

DNA-DEPENDENT RNA POLYMERASE SUBUNITS

COG Name Group Contig Gene COG ID Score Evalue
DNA-directed RNA polymerase alpha subunit/40 kD subunit K Contig392 Exig0123 COG0202 350 6e-98
DNA-directed RNA polymerase beta subunit/140 kD subunit K Contig392 Exig0088 COG0085 1156 0.0
DNA-directed RNA polymerase beta' subunit/160 kD subunit K Contig392 Exig0089 COG0086 892 0.0
DNA-directed RNA polymerase delta subunit K Contig392 Exig2735 COG3343 53 1e-08
DNA-directed RNA polymerase sigma subunit (sigma70/sigma32) K Contig392 Exig0079 COG0568 53 1e-08
DNA-directed RNA polymerase sigma subunit (sigma70/sigma32) K Contig392 Exig0832 COG0568 340 9e-95
DNA-directed RNA polymerase sigma subunit (sigma70/sigma32) K Contig392 Exig1853 COG0568 78 4e-16
DNA-directed RNA polymerase sigma subunit (sigma70/sigma32) K Contig392 Exig2804 COG0568 98 8e-22
DNA-directed RNA polymerase specialized sigma subunit K Contig392 Exig0079 COG1191 50 2e-07
DNA-directed RNA polymerase specialized sigma subunit K Contig392 Exig0136 COG1191 45 2e-06
DNA-directed RNA polymerase specialized sigma subunit K Contig392 Exig0164 COG1191 34 0.005
DNA-directed RNA polymerase specialized sigma subunit K Contig392 Exig0832 COG1191 135 4e-33
DNA-directed RNA polymerase specialized sigma subunit K Contig392 Exig1543 COG1191 41 5e-05
DNA-directed RNA polymerase specialized sigma subunit K Contig392 Exig1853 COG1191 190 8e-50
DNA-directed RNA polymerase specialized sigma subunit K Contig392 Exig2532 COG1191 39 2e-04
DNA-directed RNA polymerase specialized sigma subunit K Contig392 Exig2619 COG1191 33 0.009
DNA-directed RNA polymerase specialized sigma subunit K Contig392 Exig2804 COG1191 195 2e-51
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K Contig392 Exig0079 COG1595 74 1e-14
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K Contig392 Exig0136 COG1595 119 1e-28
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K Contig392 Exig0164 COG1595 101 4e-23
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K Contig392 Exig1543 COG1595 94 4e-21
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K Contig392 Exig1853 COG1595 42 4e-05
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K Contig392 Exig2532 COG1595 112 2e-26
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K Contig392 Exig2804 COG1595 40 1e-04
DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog K Contig392 Exig2400 COG1508 156 2e-39
DNA-directed RNA polymerase subunit E' K Contig392 Exig0049 COG1095 39 2e-04
DNA-directed RNA polymerase subunit E' K Contig392 Exig1806 COG1095 41 1e-04
DNA-directed RNA polymerase subunit E' K Contig392 Exig1832 COG1095 36 0.008
DNA-directed RNA polymerase subunit E' K Contig392 Exig2291 COG1095 39 9e-05
DNA-directed RNA polymerase subunit E' K Contig392 Exig2380 COG1095 69 1e-12
DNA-directed RNA polymerase subunit K/omega K Contig392 Exig1929 COG1758 58 2e-10
COG Name Group Contig Gene COG ID Score Evalue
DNA helicase TIP49 TBP-interacting protein K Contig392 Exig0018 COG1224 42 1e-04
DNA helicase TIP49 TBP-interacting protein K Contig392 Exig0052 COG1224 48 2e-06
DNA helicase TIP49 TBP-interacting protein K Contig392 Exig2097 COG1224 39 3e-04
DNA or RNA helicase of superfamily II K Contig392 Exig0044 COG1061 60 7e-10
DNA or RNA helicase of superfamily II K Contig392 Exig0147 COG1061 39 0.002
DNA or RNA helicase of superfamily II K Contig392 Exig0310 COG1061 229 4e-61
DNA or RNA helicase of superfamily II K Contig392 Exig0609 COG1061 52 1e-07
DNA or RNA helicase of superfamily II K Contig392 Exig0618 COG1061 72 7e-14
DNA or RNA helicase of superfamily II K Contig392 Exig0839 COG1061 54 3e-08
DNA or RNA helicase of superfamily II K Contig392 Exig1586 COG1061 92 2e-19
DNA or RNA helicase of superfamily II K Contig392 Exig1765 COG1061 50 4e-07
DNA or RNA helicase of superfamily II K Contig392 Exig1817 COG1061 48 1e-06
DNA or RNA helicase of superfamily II K Contig392 Exig1912 COG1061 61 3e-10
DNA or RNA helicase of superfamily II K Contig392 Exig1927 COG1061 56 1e-08
DNA or RNA helicase of superfamily II K Contig392 Exig2416 COG1061 61 2e-10
DNA or RNA helicase of superfamily II K Contig392 Exig2466 COG1061 72 1e-13
DNA or RNA helicase of superfamily II K Contig392 Exig2932 COG1061 50 3e-07
DNA or RNA helicase of superfamily II K Contig392 Exig2953 COG1061 247 3e-66
DNA or RNA helicase of superfamily II K Contig392 Exig2973 COG1061 76 8e-15
dsRNA-specific ribonuclease K Contig392 Exig1906 COG0571 248 2e-67
Exoribonuclease II K Contig392 Exig2380 COG4776 200 3e-52
Exoribonuclease R K Contig392 Exig0049 COG0557 46 2e-06
Exoribonuclease R K Contig392 Exig1806 COG0557 43 4e-05
Exoribonuclease R K Contig392 Exig1832 COG0557 48 2e-06
Exoribonuclease R K Contig392 Exig2291 COG0557 40 5e-05
Exoribonuclease R K Contig392 Exig2380 COG0557 703 0.0
Exoribonuclease R K Contig392 Exig2803 COG0557 43 6e-05
Genetic competence transcription factor K Contig392 Exig0725 COG4903 76 1e-15
Genetic competence transcription factor K Contig392 Exig2429 COG4903 57 6e-10
Glycerol-3-phosphate responsive antiterminator (mRNA-binding) K Contig392 Exig0713 COG1954 210 8e-56
Guanosine polyphosphate pyrophosphohydrolase/synthetase K Contig392 Exig1629 COG0317 39 5e-04
Guanosine polyphosphate pyrophosphohydrolase/synthetase K Contig392 Exig2042 COG0317 62 3e-11
Guanosine polyphosphate pyrophosphohydrolase/synthetase K Contig392 Exig2089 COG0317 900 0.0
Histone acetyltransferase K Contig392 Exig0778 COG1243 75 8e-15
Histone acetyltransferase K Contig392 Exig1490 COG1243 44 5e-06
Histone acetyltransferase K Contig392 Exig1572 COG1243 38 4e-04
Histone acetyltransferase K Contig392 Exig2424 COG1243 36 0.002
Histone acetyltransferase HPA2 and related acetyltransferase K Contig392 Exig1519 COG0454 34 0.004
Histone chaperone involved in gene silencing K Contig392 Exig1148 COG5137 36 0.003
IkappaB kinase complex IKAP component K Contig392 Exig2279 COG5290 36 0.002
Negative regulator of flagellin synthesis (anti-sigma28 factor) K Contig392 Exig2463 COG2747 40 5e-05
Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase K Contig392 Exig1239 COG0378 35 0.009
Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase K Contig392 Exig1859 COG0378 38 8e-04
Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase K Contig392 Exig2067 COG0378 34 0.006
Nucleosome binding factor SPN SPT16 subunit K Contig392 Exig0899 COG5406 39 4e-04
Nucleosome binding factor SPN SPT16 subunit K Contig392 Exig2221 COG5406 56 5e-09
Phage shock protein A (IM30) suppresses sigma54-dependent transcription K Contig392 Exig0538 COG1842 38 0.001
Phage shock protein A (IM30) suppresses sigma54-dependent transcription K Contig392 Exig0602 COG1842 45 3e-06
Phenylacetic acid-responsive transcriptional repressor K Contig392 Exig0399 COG3327 284 6e-78
Pleiotropic transcriptional repressor K Contig392 Exig1883 COG4465 352 2e-98
Predicted nucleic-acid-binding protein implicated in transcription termination K Contig392 Exig1839 COG2740 86 6e-19
Predicted RNA-binding protein homologous to eukaryotic snRNP K Contig392 Exig0538 COG1293 40 5e-04
Predicted RNA-binding protein homologous to eukaryotic snRNP K Contig392 Exig1931 COG1293 424 1.0e-120
Predicted RNA polymerase sigma factor containing a TPR repeat domain K Contig392 Exig0136 COG4941 44 6e-06
Predicted transcriptional regulator protein containing CBS domains K Contig392 Exig0008 COG4109 58 1e-09
Predicted transcriptional regulator protein containing CBS domains K Contig392 Exig0273 COG4109 41 1e-04
Predicted transcriptional regulator protein containing CBS domains K Contig392 Exig0494 COG4109 42 6e-05
Predicted transcriptional regulator protein containing CBS domains K Contig392 Exig0533 COG4109 42 9e-05
Predicted transcriptional regulator protein containing CBS domains K Contig392 Exig2220 COG4109 566 1.0e-162
Predicted transcriptional regulator protein containing CBS domains K Contig392 Exig2239 COG4109 37 9e-04
Predicted transcriptional regulator protein containing CBS domains K Contig392 Exig2412 COG4109 37 0.001
Predicted transcriptional regulator protein containing CBS domains K Contig392 Exig2500 COG4109 41 2e-05
Predicted transcriptional regulator protein containing CBS domains K Contig392 Exig2748 COG4109 49 6e-07
Predicted transcriptional regulator protein containing CBS domains K Contig392 Exig2988 COG4109 35 0.003
Predicted transcriptional regulator protein K Contig392 Exig1094 COG4189 38 3e-04
Predicted transcriptional regulator protein K Contig392 Exig1353 COG4742 33 0.007
Predicted transcriptional regulator protein K Contig392 Exig1473 COG4742 36 5e-04
Predicted transcriptional regulator protein K Contig392 Exig1473 COG4189 44 2e-06
Predicted transcriptional regulator protein K Contig392 Exig1824 COG3888 36 0.002
Predicted transcriptional regulator protein K Contig392 Exig2663 COG4742 37 4e-04
Predicted transcriptional regulator protein K Contig392 Exig2701 COG4189 33 0.007
Predicted transcriptional regulator protein K Contig392 Exig2737 COG4189 44 3e-06
Predicted transcriptional regulator protein K Contig392 Exig2969 COG4742 34 0.004
Predicted transcription regulator containing HTH domain K Contig392 Exig2584 COG5499 40 2e-04
Predicted transmembrane transcriptional regulator (anti-sigma factor) K Contig392 Exig0137 COG5662 49 3e-07
Predicted transmembrane transcriptional regulator (anti-sigma factor) K Contig392 Exig2531 COG5662 36 0.003
Putative transcription activator K Contig392 Exig0935 COG0819 217 7e-58
Rad3-related DNA helicase K Contig392 Exig0310 COG1199 38 0.002
Rad3-related DNA helicase K Contig392 Exig0609 COG1199 50 2e-07
Rad3-related DNA helicase K Contig392 Exig0839 COG1199 40 4e-04
Rad3-related DNA helicase K Contig392 Exig1777 COG1199 381 1.0e-106
Rad3-related DNA helicase K Contig392 Exig1817 COG1199 41 2e-04
Rad3-related DNA helicase K Contig392 Exig2932 COG1199 39 0.001
RecG-like helicase K Contig392 Exig0044 COG1200 351 3e-97
RecG-like helicase K Contig392 Exig0609 COG1200 35 0.009
RecG-like helicase K Contig392 Exig0618 COG1200 57 3e-09
RecG-like helicase K Contig392 Exig0839 COG1200 51 2e-07
RecG-like helicase K Contig392 Exig1026 COG1200 35 0.007
RecG-like helicase K Contig392 Exig1765 COG1200 38 0.004
RecG-like helicase K Contig392 Exig1817 COG1200 44 3e-05
RecG-like helicase K Contig392 Exig1912 COG1200 757 0.0
RecG-like helicase K Contig392 Exig1927 COG1200 65 2e-11
RecG-like helicase K Contig392 Exig2416 COG1200 54 3e-08
RecG-like helicase K Contig392 Exig2466 COG1200 51 1e-07
RecG-like helicase K Contig392 Exig2932 COG1200 43 4e-05
RecG-like helicase K Contig392 Exig2973 COG1200 51 2e-07
Regulators of stationary/sporulation gene expression K Contig392 Exig0031 COG2002 62 9e-12
Regulators of stationary/sporulation gene expression K Contig392 Exig1457 COG2002 43 4e-06
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig392 Exig0227 COG4567 52 5e-08
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig392 Exig0515 COG4567 49 2e-07
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig392 Exig0589 COG4567 38 7e-04
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig392 Exig0599 COG4567 41 5e-05
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig392 Exig0644 COG4567 53 2e-08
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig392 Exig0723 COG4567 45 6e-06
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig392 Exig0731 COG4567 42 1e-05
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig392 Exig0912 COG4567 40 2e-04
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig392 Exig0981 COG4567 57 3e-09
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig392 Exig1016 COG4567 55 4e-09
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig392 Exig1866 COG4567 60 5e-11
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig392 Exig2177 COG4567 49 2e-07
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig392 Exig2204 COG4567 67 1e-12
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig392 Exig2451 COG4567 61 6e-11
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig392 Exig2468 COG4567 49 4e-07
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig392 Exig2494 COG4567 47 8e-07
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig392 Exig2605 COG4567 68 4e-13
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig392 Exig2692 COG4567 48 5e-07
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig392 Exig2732 COG4567 46 1e-06
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig392 Exig2843 COG4567 62 5e-11
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig392 Exig2886 COG4567 50 2e-07
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig392 Exig2929 COG4567 66 2e-12
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K Contig392 Exig3031 COG4567 63 2e-11
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig392 Exig0007 COG3437 87 2e-18
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig392 Exig0227 COG3437 46 3e-06
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig392 Exig0515 COG3437 87 1e-18
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig392 Exig0589 COG3437 63 2e-11
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig392 Exig0599 COG3437 53 2e-08
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig392 Exig0644 COG3437 107 7e-25
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig392 Exig0723 COG3437 80 2e-16
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig392 Exig0731 COG3437 82 1e-17
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig392 Exig0912 COG3437 55 7e-09
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig392 Exig0981 COG3437 87 3e-18
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig392 Exig0985 COG3437 43 3e-05
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig392 Exig1016 COG3437 101 5e-23
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig392 Exig1743 COG3437 41 2e-04
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig392 Exig1866 COG3437 76 9e-16
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig392 Exig2142 COG3437 36 0.003
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig392 Exig2177 COG3437 101 4e-23
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig392 Exig2204 COG3437 93 1e-20
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig392 Exig2451 COG3437 67 1e-12
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig392 Exig2468 COG3437 69 3e-13
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig392 Exig2494 COG3437 72 3e-14
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig392 Exig2605 COG3437 91 7e-20
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig392 Exig2692 COG3437 78 6e-16
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig392 Exig2732 COG3437 70 7e-14
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig392 Exig2843 COG3437 89 3e-19
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig392 Exig2886 COG3437 96 2e-21
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig392 Exig2929 COG3437 75 4e-15
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig392 Exig2937 COG3437 182 5e-47
Response regulator containing a CheY-like receiver domain and an HD-GYP domain K Contig392 Exig3031 COG3437 102 3e-23
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig392 Exig0079 COG2197 35 0.004
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig392 Exig0227 COG2197 71 7e-14
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig392 Exig0515 COG2197 74 9e-15
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig392 Exig0589 COG2197 85 5e-18
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig392 Exig0599 COG2197 212 1e-56
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig392 Exig0644 COG2197 94 8e-21
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig392 Exig0723 COG2197 68 7e-13
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig392 Exig0731 COG2197 75 2e-15
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig392 Exig0912 COG2197 82 2e-17
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig392 Exig0981 COG2197 77 2e-15
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig392 Exig0985 COG2197 51 7e-08
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig392 Exig1016 COG2197 100 9e-23
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig392 Exig1866 COG2197 97 3e-22
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig392 Exig2142 COG2197 44 1e-05
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig392 Exig2177 COG2197 76 2e-15
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig392 Exig2204 COG2197 89 3e-19
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig392 Exig2451 COG2197 68 3e-13
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig392 Exig2468 COG2197 204 3e-54
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig392 Exig2494 COG2197 61 6e-11
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig392 Exig2532 COG2197 36 0.002
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig392 Exig2605 COG2197 87 9e-19
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig392 Exig2692 COG2197 73 2e-14
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig392 Exig2732 COG2197 68 2e-13
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig392 Exig2843 COG2197 77 1e-15
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig392 Exig2886 COG2197 82 5e-17
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig392 Exig2929 COG2197 75 3e-15
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K Contig392 Exig3031 COG2197 88 5e-19
Response regulator of citrate/malate metabolism K Contig392 Exig0227 COG4565 68 7e-13
Response regulator of citrate/malate metabolism K Contig392 Exig0515 COG4565 60 1e-10
Response regulator of citrate/malate metabolism K Contig392 Exig0589 COG4565 63 1e-11
Response regulator of citrate/malate metabolism K Contig392 Exig0599 COG4565 54 7e-09
Response regulator of citrate/malate metabolism K Contig392 Exig0644 COG4565 63 2e-11
Response regulator of citrate/malate metabolism K Contig392 Exig0723 COG4565 58 6e-10
Response regulator of citrate/malate metabolism K Contig392 Exig0731 COG4565 37 5e-04
Response regulator of citrate/malate metabolism K Contig392 Exig0912 COG4565 65 4e-12
Response regulator of citrate/malate metabolism K Contig392 Exig0981 COG4565 66 5e-12
Response regulator of citrate/malate metabolism K Contig392 Exig1016 COG4565 63 1e-11
Response regulator of citrate/malate metabolism K Contig392 Exig1866 COG4565 86 6e-19
Response regulator of citrate/malate metabolism K Contig392 Exig2177 COG4565 62 4e-11
Response regulator of citrate/malate metabolism K Contig392 Exig2204 COG4565 59 4e-10
Response regulator of citrate/malate metabolism K Contig392 Exig2451 COG4565 83 2e-17
Response regulator of citrate/malate metabolism K Contig392 Exig2468 COG4565 74 1e-14
Response regulator of citrate/malate metabolism K Contig392 Exig2494 COG4565 58 6e-10
Response regulator of citrate/malate metabolism K Contig392 Exig2605 COG4565 67 1e-12
Response regulator of citrate/malate metabolism K Contig392 Exig2692 COG4565 63 2e-11
Response regulator of citrate/malate metabolism K Contig392 Exig2732 COG4565 57 3e-10
Response regulator of citrate/malate metabolism K Contig392 Exig2843 COG4565 69 2e-13
Response regulator of citrate/malate metabolism K Contig392 Exig2886 COG4565 61 8e-11
Response regulator of citrate/malate metabolism K Contig392 Exig2929 COG4565 71 6e-14
Response regulator of citrate/malate metabolism K Contig392 Exig3031 COG4565 72 3e-14
Response regulator of the LytR/AlgR family K Contig392 Exig0227 COG3279 171 4e-44
Response regulator of the LytR/AlgR family K Contig392 Exig0515 COG3279 51 7e-08
Response regulator of the LytR/AlgR family K Contig392 Exig0589 COG3279 57 8e-10
Response regulator of the LytR/AlgR family K Contig392 Exig0599 COG3279 62 4e-11
Response regulator of the LytR/AlgR family K Contig392 Exig0644 COG3279 59 3e-10
Response regulator of the LytR/AlgR family K Contig392 Exig0723 COG3279 52 4e-08
Response regulator of the LytR/AlgR family K Contig392 Exig0731 COG3279 45 1e-06
Response regulator of the LytR/AlgR family K Contig392 Exig0912 COG3279 52 5e-08
Response regulator of the LytR/AlgR family K Contig392 Exig0981 COG3279 49 6e-07
Response regulator of the LytR/AlgR family K Contig392 Exig0985 COG3279 36 0.004
Response regulator of the LytR/AlgR family K Contig392 Exig1016 COG3279 62 5e-11
Response regulator of the LytR/AlgR family K Contig392 Exig1866 COG3279 60 5e-11
Response regulator of the LytR/AlgR family K Contig392 Exig2177 COG3279 66 2e-12
Response regulator of the LytR/AlgR family K Contig392 Exig2204 COG3279 63 2e-11
Response regulator of the LytR/AlgR family K Contig392 Exig2451 COG3279 48 8e-07
Response regulator of the LytR/AlgR family K Contig392 Exig2468 COG3279 68 4e-13
Response regulator of the LytR/AlgR family K Contig392 Exig2494 COG3279 51 6e-08
Response regulator of the LytR/AlgR family K Contig392 Exig2605 COG3279 56 2e-09
Response regulator of the LytR/AlgR family K Contig392 Exig2692 COG3279 44 7e-06
Response regulator of the LytR/AlgR family K Contig392 Exig2732 COG3279 43 5e-06
Response regulator of the LytR/AlgR family K Contig392 Exig2843 COG3279 58 7e-10
Response regulator of the LytR/AlgR family K Contig392 Exig2886 COG3279 59 2e-10
Response regulator of the LytR/AlgR family K Contig392 Exig2929 COG3279 52 4e-08
Response regulator of the LytR/AlgR family K Contig392 Exig3031 COG3279 67 1e-12
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig392 Exig0227 COG0745 68 4e-13
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig392 Exig0515 COG0745 182 1e-47
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig392 Exig0589 COG0745 60 2e-10
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig392 Exig0599 COG0745 66 2e-12
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig392 Exig0644 COG0745 244 4e-66
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig392 Exig0723 COG0745 207 5e-55
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig392 Exig0731 COG0745 97 3e-22
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig392 Exig0912 COG0745 67 2e-12
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig392 Exig0981 COG0745 104 1e-23
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig392 Exig0985 COG0745 64 2e-11
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig392 Exig1016 COG0745 247 7e-67
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig392 Exig1743 COG0745 37 0.003
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig392 Exig1866 COG0745 88 1e-19
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig392 Exig2142 COG0745 60 2e-10
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig392 Exig2177 COG0745 217 4e-58
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig392 Exig2204 COG0745 251 4e-68
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig392 Exig2451 COG0745 186 1e-48
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig392 Exig2468 COG0745 79 2e-16
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig392 Exig2494 COG0745 180 5e-47
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig392 Exig2605 COG0745 213 9e-57
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig392 Exig2692 COG0745 214 4e-57
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig392 Exig2732 COG0745 73 5e-15
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig392 Exig2843 COG0745 235 2e-63
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig392 Exig2886 COG0745 234 4e-63
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig392 Exig2929 COG0745 204 5e-54
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K Contig392 Exig3031 COG0745 253 9e-69
Serine phosphatase RsbU regulator of sigma subunit K Contig392 Exig0981 COG2208 107 1e-24
Serine/threonine protein kinase K Contig392 Exig1923 COG0515 173 5e-44
Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain K Contig392 Exig0914 COG4650 135 7e-33
SOS-response transcriptional repressors (RecA-mediated autopeptidase) K Contig392 Exig1094 COG1974 214 4e-57
Sugar diacid utilization regulator K Contig392 Exig0679 COG3835 56 2e-09
Sugar diacid utilization regulator K Contig392 Exig2868 COG3835 70 4e-13
Superfamily II DNA and RNA helicase K Contig392 Exig0044 COG0513 69 1e-12
Superfamily II DNA and RNA helicase K Contig392 Exig0310 COG0513 56 9e-09
Superfamily II DNA and RNA helicase K Contig392 Exig0609 COG0513 262 4e-71
Superfamily II DNA and RNA helicase K Contig392 Exig0618 COG0513 434 1.0e-123
Superfamily II DNA and RNA helicase K Contig392 Exig0839 COG0513 338 5e-94
Superfamily II DNA and RNA helicase K Contig392 Exig1586 COG0513 45 3e-05
Superfamily II DNA and RNA helicase K Contig392 Exig1765 COG0513 98 3e-21
Superfamily II DNA and RNA helicase K Contig392 Exig1817 COG0513 88 2e-18
Superfamily II DNA and RNA helicase K Contig392 Exig1859 COG0513 36 0.006
Superfamily II DNA and RNA helicase K Contig392 Exig1912 COG0513 76 8e-15
Superfamily II DNA and RNA helicase K Contig392 Exig1927 COG0513 42 2e-04
Superfamily II DNA and RNA helicase K Contig392 Exig2416 COG0513 75 2e-14
Superfamily II DNA and RNA helicase K Contig392 Exig2748 COG0513 41 2e-04
Superfamily II DNA and RNA helicase K Contig392 Exig2932 COG0513 395 1.0e-111
Superfamily II DNA and RNA helicase K Contig392 Exig2953 COG0513 56 1e-08
Superfamily II DNA and RNA helicase K Contig392 Exig2973 COG0513 379 1.0e-106
Superfamily II DNA/RNA helicase SNF2 family K Contig392 Exig0618 COG0553 36 0.007
Superfamily II DNA/RNA helicase SNF2 family K Contig392 Exig1586 COG0553 267 2e-72
Superfamily II DNA/RNA helicase SNF2 family K Contig392 Exig2932 COG0553 42 1e-04
Transcriptional accessory protein K Contig392 Exig0049 COG2183 80 8e-17
Transcriptional accessory protein K Contig392 Exig0771 COG2183 48 4e-07
Transcriptional accessory protein K Contig392 Exig1806 COG2183 81 9e-17
Transcriptional accessory protein K Contig392 Exig1832 COG2183 71 4e-13
Transcriptional accessory protein K Contig392 Exig2291 COG2183 83 8e-18
Transcriptional accessory protein K Contig392 Exig2380 COG2183 56 1e-08
Transcriptional accessory protein K Contig392 Exig2803 COG2183 759 0.0
Transcriptional activator of acetoin/glycerol metabolism K Contig392 Exig0068 COG3284 36 0.008
Transcriptional activator of acetoin/glycerol metabolism K Contig392 Exig0914 COG3284 257 1e-69
Transcriptional activator of acetoin/glycerol metabolism K Contig392 Exig0974 COG3284 43 3e-05
Transcriptional activator of acetoin/glycerol metabolism K Contig392 Exig1597 COG3284 41 2e-04
Transcriptional activator of acetoin/glycerol metabolism K Contig392 Exig2081 COG3284 44 3e-05
Transcriptional activator of acetoin/glycerol metabolism K Contig392 Exig2145 COG3284 36 0.009
Transcriptional activator of acetoin/glycerol metabolism K Contig392 Exig2146 COG3284 38 0.001
Transcriptional antiterminator K Contig392 Exig1462 COG3711 36 0.003
Transcriptional antiterminator K Contig392 Exig2310 COG3933 55 7e-09
Transcriptional antiterminator K Contig392 Exig2310 COG3711 132 2e-32
Transcriptional antiterminator K Contig392 Exig2913 COG3933 42 6e-05
Transcriptional antiterminator K Contig392 Exig2913 COG3711 116 2e-27
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain K Contig392 Exig0292 COG4977 51 1e-07
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain K Contig392 Exig0452 COG4977 34 0.006
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain K Contig392 Exig0589 COG4977 91 9e-20
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain K Contig392 Exig1007 COG4977 45 3e-06
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain K Contig392 Exig1325 COG4977 66 3e-12
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain K Contig392 Exig2502 COG4977 93 3e-20

TRANSCRIPTIONAL REGULATORS

COG Name Group Contig Gene COG ID Score Evalue
Arginine repressor K Contig392 Exig0910 COG1438 182 8e-48
ATP-dependent transcriptional regulator protein K Contig392 Exig0599 COG2909 73 1e-14
ATP-dependent transcriptional regulator protein K Contig392 Exig2468 COG2909 62 3e-11
Mn-dependent transcriptional regulator protein K Contig392 Exig0366 COG1321 34 0.006
Mn-dependent transcriptional regulator protein K Contig392 Exig0894 COG1321 117 4e-28
Mn-dependent transcriptional regulator protein K Contig392 Exig1360 COG1321 42 2e-05
Mn-dependent transcriptional regulator protein K Contig392 Exig2179 COG1321 36 8e-04
Mn-dependent transcriptional regulator protein K Contig392 Exig2215 COG1321 37 6e-04
Mn-dependent transcriptional regulator protein K Contig392 Exig2269 COG1321 37 3e-04
Mn-dependent transcriptional regulator protein K Contig392 Exig2737 COG1321 36 6e-04
Predicted transcriptional regulator protein consists of a Zn-ribbon and ATP-cone domains K Contig392 Exig2196 COG1327 203 5e-54
Predicted transcriptional regulator protein containing the HTH domain K Contig392 Exig1011 COG1386 147 4e-37
Predicted transcriptional regulator protein K Contig392 Exig0008 COG3620 41 2e-04
Predicted transcriptional regulator protein K Contig392 Exig0008 COG2524 55 2e-08
Predicted transcriptional regulator protein K Contig392 Exig0009 COG1725 73 5e-14
Predicted transcriptional regulator protein K Contig392 Exig0155 COG1733 117 2e-28
Predicted transcriptional regulator protein K Contig392 Exig0175 COG1959 91 3e-20
Predicted transcriptional regulator protein K Contig392 Exig0175 COG2524 36 0.002
Predicted transcriptional regulator protein K Contig392 Exig0272 COG0789 56 1e-09
Predicted transcriptional regulator protein K Contig392 Exig0273 COG2524 47 3e-06
Predicted transcriptional regulator protein K Contig392 Exig0282 COG1733 116 4e-28
Predicted transcriptional regulator protein K Contig392 Exig0305 COG1695 57 3e-10
Predicted transcriptional regulator protein K Contig392 Exig0366 COG2345 33 0.009
Predicted transcriptional regulator protein K Contig392 Exig0480 COG1725 68 6e-13
Predicted transcriptional regulator protein K Contig392 Exig0494 COG2524 57 2e-09
Predicted transcriptional regulator protein K Contig392 Exig0533 COG3620 41 1e-04
Predicted transcriptional regulator protein K Contig392 Exig0533 COG2524 45 1e-05
Predicted transcriptional regulator protein K Contig392 Exig0544 COG0640 64 2e-12
Predicted transcriptional regulator protein K Contig392 Exig0698 COG0789 45 9e-07
Predicted transcriptional regulator protein K Contig392 Exig0779 COG2524 38 0.001
Predicted transcriptional regulator protein K Contig392 Exig0829 COG2345 39 2e-04
Predicted transcriptional regulator protein K Contig392 Exig0829 COG2524 36 0.003
Predicted transcriptional regulator protein K Contig392 Exig0829 COG2865 38 4e-04
Predicted transcriptional regulator protein K Contig392 Exig0894 COG2345 38 3e-04
Predicted transcriptional regulator protein K Contig392 Exig0910 COG2378 34 0.004
Predicted transcriptional regulator protein K Contig392 Exig0995 COG1695 74 4e-15
Predicted transcriptional regulator protein K Contig392 Exig1056 COG2378 35 0.006
Predicted transcriptional regulator protein K Contig392 Exig1067 COG1396 41 1e-04
Predicted transcriptional regulator protein K Contig392 Exig1067 COG1476 41 2e-04
Predicted transcriptional regulator protein K Contig392 Exig1082 COG0789 63 7e-12
Predicted transcriptional regulator protein K Contig392 Exig1094 COG2932 47 7e-07
Predicted transcriptional regulator protein K Contig392 Exig1110 COG1959 113 7e-27
Predicted transcriptional regulator protein K Contig392 Exig1150 COG2865 36 0.002
Predicted transcriptional regulator protein K Contig392 Exig1190 COG1725 95 1e-21
Predicted transcriptional regulator protein K Contig392 Exig1209 COG1959 105 1e-24
Predicted transcriptional regulator protein K Contig392 Exig1218 COG1959 100 3e-23
Predicted transcriptional regulator protein K Contig392 Exig1222 COG3355 33 0.008
Predicted transcriptional regulator protein K Contig392 Exig1320 COG1733 127 2e-31
Predicted transcriptional regulator protein K Contig392 Exig1350 COG1396 38 9e-05
Predicted transcriptional regulator protein K Contig392 Exig1350 COG1395 39 1e-04
Predicted transcriptional regulator protein K Contig392 Exig1350 COG1476 83 3e-18
Predicted transcriptional regulator protein K Contig392 Exig1356 COG3355 34 0.006
Predicted transcriptional regulator protein K Contig392 Exig1380 COG0789 73 6e-15
Predicted transcriptional regulator protein K Contig392 Exig1393 COG1725 51 5e-08
Predicted transcriptional regulator protein K Contig392 Exig1393 COG1510 34 0.008
Predicted transcriptional regulator protein K Contig392 Exig1404 COG2345 36 0.004
Predicted transcriptional regulator protein K Contig392 Exig1423 COG0640 54 2e-09
Predicted transcriptional regulator protein K Contig392 Exig1423 COG1777 36 6e-04
Predicted transcriptional regulator protein K Contig392 Exig1433 COG1396 36 7e-04
Predicted transcriptional regulator protein K Contig392 Exig1433 COG3620 34 0.002
Predicted transcriptional regulator protein K Contig392 Exig1433 COG1476 78 1e-16
Predicted transcriptional regulator protein K Contig392 Exig1448 COG1725 57 1e-09
Predicted transcriptional regulator protein K Contig392 Exig1462 COG1725 35 0.007
Predicted transcriptional regulator protein K Contig392 Exig1462 COG1959 35 0.008
Predicted transcriptional regulator protein K Contig392 Exig1462 COG2378 131 8e-32
Predicted transcriptional regulator protein K Contig392 Exig1473 COG0640 46 6e-07
Predicted transcriptional regulator protein K Contig392 Exig1473 COG1777 33 0.005
Predicted transcriptional regulator protein K Contig392 Exig1473 COG2345 35 0.001
Predicted transcriptional regulator protein K Contig392 Exig1521 COG1777 35 0.005
Predicted transcriptional regulator protein K Contig392 Exig1556 COG1959 95 1e-21
Predicted transcriptional regulator protein K Contig392 Exig1605 COG2378 77 1e-15
Predicted transcriptional regulator protein K Contig392 Exig1703 COG1959 121 2e-29
Predicted transcriptional regulator protein K Contig392 Exig1729 COG1396 37 0.001
Predicted transcriptional regulator protein K Contig392 Exig1729 COG3620 37 0.002
Predicted transcriptional regulator protein K Contig392 Exig1729 COG1476 38 7e-04
Predicted transcriptional regulator protein K Contig392 Exig1730 COG1396 37 0.001
Predicted transcriptional regulator protein K Contig392 Exig1730 COG1476 43 3e-05
Predicted transcriptional regulator protein K Contig392 Exig1781 COG2345 37 0.002
Predicted transcriptional regulator protein K Contig392 Exig1816 COG0789 62 7e-11
Predicted transcriptional regulator protein K Contig392 Exig1824 COG1725 66 3e-12
Predicted transcriptional regulator protein K Contig392 Exig1896 COG2932 40 9e-05
Predicted transcriptional regulator protein K Contig392 Exig1935 COG1733 105 5e-25
Predicted transcriptional regulator protein K Contig392 Exig2080 COG1959 130 5e-32
Predicted transcriptional regulator protein K Contig392 Exig2104 COG3620 36 0.005
Predicted transcriptional regulator protein K Contig392 Exig2215 COG1725 48 3e-07
Predicted transcriptional regulator protein K Contig392 Exig2215 COG1959 37 7e-04
Predicted transcriptional regulator protein K Contig392 Exig2220 COG1725 41 2e-04
Predicted transcriptional regulator protein K Contig392 Exig2220 COG2524 53 3e-08
Predicted transcriptional regulator protein K Contig392 Exig2239 COG3620 37 0.001
Predicted transcriptional regulator protein K Contig392 Exig2239 COG2524 44 5e-06
Predicted transcriptional regulator protein K Contig392 Exig2269 COG2378 40 2e-05
Predicted transcriptional regulator protein K Contig392 Exig2269 COG2865 34 0.002
Predicted transcriptional regulator protein K Contig392 Exig2373 COG1733 124 1e-30
Predicted transcriptional regulator protein K Contig392 Exig2500 COG3620 41 3e-05
Predicted transcriptional regulator protein K Contig392 Exig2500 COG2524 37 5e-04
Predicted transcriptional regulator protein K Contig392 Exig2526 COG1396 51 4e-08
Predicted transcriptional regulator protein K Contig392 Exig2526 COG3620 39 2e-04
Predicted transcriptional regulator protein K Contig392 Exig2526 COG1476 49 2e-07
Predicted transcriptional regulator protein K Contig392 Exig2580 COG1396 45 2e-06
Predicted transcriptional regulator protein K Contig392 Exig2580 COG1395 35 0.002
Predicted transcriptional regulator protein K Contig392 Exig2580 COG1476 37 4e-04
Predicted transcriptional regulator protein K Contig392 Exig2584 COG3620 39 5e-04
Predicted transcriptional regulator protein K Contig392 Exig2584 COG1476 36 0.004
Predicted transcriptional regulator protein K Contig392 Exig2663 COG1733 35 0.001
Predicted transcriptional regulator protein K Contig392 Exig2663 COG2345 33 0.005
Predicted transcriptional regulator protein K Contig392 Exig2701 COG1725 108 9e-26
Predicted transcriptional regulator protein K Contig392 Exig2704 COG1725 57 1e-09
Predicted transcriptional regulator protein K Contig392 Exig2737 COG0640 56 7e-10
Predicted transcriptional regulator protein K Contig392 Exig2748 COG3620 45 9e-06
Predicted transcriptional regulator protein K Contig392 Exig2748 COG2524 44 2e-05
Predicted transcriptional regulator protein K Contig392 Exig2792 COG1733 102 9e-24
Predicted transcriptional regulator protein K Contig392 Exig2909 COG1396 35 0.001
Predicted transcriptional regulator protein K Contig392 Exig2909 COG1476 36 4e-04
Predicted transcriptional regulator protein K Contig392 Exig2969 COG3355 33 0.007
Predicted transcriptional regulator protein K Contig392 Exig2969 COG2345 35 0.003
Predicted transcriptional regulator protein K Contig392 Exig2988 COG3620 44 6e-06
Predicted transcriptional regulator protein K Contig392 Exig2988 COG2524 43 1e-05
Predicted transcriptional regulator protein K Contig392 Exig2989 COG3355 33 0.008
Predicted transcriptional regulator protein K Contig392 Exig3043 COG1475 119 2e-28
Predicted transcriptional regulator protein K Contig392 Exig3044 COG1475 115 4e-27
Putative stress-responsive transcriptional regulator protein K Contig392 Exig1514 COG1983 46 4e-07
Putative transcriptional regulator protein K Contig392 Exig0053 COG1521 273 8e-75
Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains K Contig392 Exig0914 COG3604 333 3e-92
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K Contig392 Exig0052 COG3829 42 1e-04
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K Contig392 Exig0914 COG3829 481 1.0e-137
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K Contig392 Exig0974 COG3829 43 3e-05
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K Contig392 Exig1017 COG3829 40 7e-04
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K Contig392 Exig1597 COG3829 42 5e-05
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K Contig392 Exig2081 COG3829 44 3e-05
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K Contig392 Exig2203 COG3829 47 4e-06
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K Contig392 Exig2453 COG3829 42 2e-04
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K Contig392 Exig2669 COG3829 38 0.004
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K Contig392 Exig2705 COG3829 40 0.001
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K Contig392 Exig2712 COG3829 46 9e-06
Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains K Contig392 Exig3030 COG3829 43 9e-05
Transcriptional regulator contains sigma factor-related N-terminal domain K Contig392 Exig2398 COG2390 215 5e-57
Transcriptional regulator K Contig392 Exig0183 COG1309 54 9e-09
Transcriptional regulator K Contig392 Exig0197 COG1309 57 1e-09
Transcriptional regulator K Contig392 Exig0347 COG0583 125 4e-30
Transcriptional regulator K Contig392 Exig0479 COG1316 185 4e-48
Transcriptional regulator K Contig392 Exig0525 COG1309 56 2e-09
Transcriptional regulator K Contig392 Exig0561 COG1316 145 7e-36
Transcriptional regulator K Contig392 Exig0812 COG1316 186 2e-48
Transcriptional regulator K Contig392 Exig0894 COG1414 33 0.007
Transcriptional regulator K Contig392 Exig1053 COG1309 59 5e-10
Transcriptional regulator K Contig392 Exig1094 COG1414 38 5e-04
Transcriptional regulator K Contig392 Exig1119 COG0583 116 2e-27
Transcriptional regulator K Contig392 Exig1324 COG0583 165 4e-42
Transcriptional regulator K Contig392 Exig1327 COG0583 128 6e-31
Transcriptional regulator K Contig392 Exig1440 COG1309 53 9e-09
Transcriptional regulator K Contig392 Exig1472 COG0583 115 3e-27
Transcriptional regulator K Contig392 Exig1473 COG1414 33 0.008
Transcriptional regulator K Contig392 Exig1654 COG0583 126 2e-30
Transcriptional regulator K Contig392 Exig1673 COG0583 117 1e-27
Transcriptional regulator K Contig392 Exig2020 COG0583 140 1e-34
Transcriptional regulator K Contig392 Exig2167 COG1309 58 5e-10
Transcriptional regulator K Contig392 Exig2471 COG1316 224 1e-59
Transcriptional regulator K Contig392 Exig2563 COG1316 226 1e-60
Transcriptional regulator K Contig392 Exig2640 COG1316 231 4e-62
Transcriptional regulator K Contig392 Exig2737 COG1414 34 0.002
Transcriptional regulator K Contig392 Exig2856 COG0583 151 7e-38
Transcriptional regulator K Contig392 Exig2897 COG1309 52 3e-08
Transcriptional regulator of a riboflavin/FAD biosynthetic operon K Contig392 Exig1360 COG1339 35 0.003
Transcriptional regulator of aromatic amino acids metabolism K Contig392 Exig0914 COG3283 256 4e-69
Transcriptional regulator of aromatic amino acids metabolism K Contig392 Exig2712 COG3283 37 0.006
Transcriptional regulator of heat shock gene K Contig392 Exig0779 COG1420 298 3e-82
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig392 Exig0009 COG1167 353 2e-98
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig392 Exig0022 COG1167 40 3e-04
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig392 Exig0480 COG1167 60 2e-10
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig392 Exig0571 COG1167 40 2e-04
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig392 Exig1033 COG1167 56 4e-09
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig392 Exig1081 COG1167 37 0.002
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig392 Exig1190 COG1167 53 7e-09
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig392 Exig1393 COG1167 49 2e-07
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig392 Exig1448 COG1167 55 3e-09
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig392 Exig1732 COG1167 144 1e-35
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig392 Exig1774 COG1167 117 2e-27
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig392 Exig1824 COG1167 61 7e-11
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig392 Exig2006 COG1167 39 6e-04
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig392 Exig2215 COG1167 47 8e-07
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig392 Exig2220 COG1167 37 0.002
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig392 Exig2300 COG1167 170 1e-43
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig392 Exig2336 COG1167 35 0.009
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig392 Exig2365 COG1167 64 1e-11
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig392 Exig2539 COG1167 147 2e-36
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig392 Exig2565 COG1167 49 4e-07
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig392 Exig2701 COG1167 67 3e-13
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig392 Exig2704 COG1167 63 1e-11
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K Contig392 Exig2995 COG1167 38 4e-04
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K Contig392 Exig0052 COG1221 37 0.007
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K Contig392 Exig0068 COG1221 42 2e-04
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K Contig392 Exig0472 COG1221 40 5e-04
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K Contig392 Exig0914 COG1221 272 5e-74
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K Contig392 Exig0974 COG1221 38 7e-04
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K Contig392 Exig1597 COG1221 43 3e-05
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K Contig392 Exig1884 COG1221 38 0.001
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K Contig392 Exig2081 COG1221 46 6e-06
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K Contig392 Exig2097 COG1221 39 5e-04
Transcriptional regulators K Contig392 Exig0009 COG1802 58 1e-09
Transcriptional regulators K Contig392 Exig0009 COG2188 72 1e-13
Transcriptional regulators K Contig392 Exig0009 COG2186 64 2e-11
Transcriptional regulators K Contig392 Exig0141 COG1737 55 1e-08
Transcriptional regulators K Contig392 Exig0199 COG1846 51 4e-08
Transcriptional regulators K Contig392 Exig0305 COG1846 33 0.007
Transcriptional regulators K Contig392 Exig0321 COG1609 303 2e-83
Transcriptional regulators K Contig392 Exig0333 COG1846 61 4e-11
Transcriptional regulators K Contig392 Exig0366 COG1846 53 1e-08
Transcriptional regulators K Contig392 Exig0370 COG1846 36 0.006
Transcriptional regulators K Contig392 Exig0433 COG1609 60 4e-10
Transcriptional regulators K Contig392 Exig0468 COG1737 211 4e-56
Transcriptional regulators K Contig392 Exig0480 COG1802 54 7e-09
Transcriptional regulators K Contig392 Exig0480 COG2188 225 2e-60
Transcriptional regulators K Contig392 Exig0480 COG2186 65 4e-12
Transcriptional regulators K Contig392 Exig0688 COG1846 57 1e-09
Transcriptional regulators K Contig392 Exig0754 COG1609 316 1e-87
Transcriptional regulators K Contig392 Exig0829 COG1522 36 0.002
Transcriptional regulators K Contig392 Exig0838 COG1609 97 1e-21
Transcriptional regulators K Contig392 Exig0894 COG1846 35 0.003
Transcriptional regulators K Contig392 Exig0894 COG1737 33 0.006
Transcriptional regulators K Contig392 Exig1094 COG1846 34 0.007
Transcriptional regulators K Contig392 Exig1094 COG1522 35 0.003
Transcriptional regulators K Contig392 Exig1137 COG1846 73 1e-14
Transcriptional regulators K Contig392 Exig1190 COG1802 37 5e-04
Transcriptional regulators K Contig392 Exig1190 COG2188 52 1e-08
Transcriptional regulators K Contig392 Exig1190 COG2186 38 2e-04
Transcriptional regulators K Contig392 Exig1222 COG1846 63 5e-12
Transcriptional regulators K Contig392 Exig1332 COG1737 43 3e-05
Transcriptional regulators K Contig392 Exig1353 COG1846 51 3e-08
Transcriptional regulators K Contig392 Exig1356 COG1846 58 3e-10
Transcriptional regulators K Contig392 Exig1360 COG1846 46 1e-06
Transcriptional regulators K Contig392 Exig1393 COG1802 127 5e-31
Transcriptional regulators K Contig392 Exig1393 COG2188 62 3e-11
Transcriptional regulators K Contig392 Exig1393 COG2186 95 6e-21
Transcriptional regulators K Contig392 Exig1448 COG1802 42 3e-05
Transcriptional regulators K Contig392 Exig1448 COG2188 188 4e-49
Transcriptional regulators K Contig392 Exig1448 COG2186 61 8e-11
Transcriptional regulators K Contig392 Exig1527 COG1522 107 4e-25
Transcriptional regulators K Contig392 Exig1626 COG1846 65 3e-12
Transcriptional regulators K Contig392 Exig1630 COG1846 50 8e-08
Transcriptional regulators K Contig392 Exig1659 COG1609 213 1e-56
Transcriptional regulators K Contig392 Exig1781 COG1522 36 0.005
Transcriptional regulators K Contig392 Exig1781 COG2188 35 0.007
Transcriptional regulators K Contig392 Exig1824 COG1802 55 3e-09
Transcriptional regulators K Contig392 Exig1824 COG2188 190 8e-50
Transcriptional regulators K Contig392 Exig1824 COG2186 80 2e-16
Transcriptional regulators K Contig392 Exig1825 COG1609 40 3e-04
Transcriptional regulators K Contig392 Exig2179 COG1846 47 5e-07
Transcriptional regulators K Contig392 Exig2215 COG1802 50 7e-08
Transcriptional regulators K Contig392 Exig2215 COG2188 68 4e-13
Transcriptional regulators K Contig392 Exig2215 COG2186 80 1e-16
Transcriptional regulators K Contig392 Exig2220 COG2188 40 4e-04
Transcriptional regulators K Contig392 Exig2242 COG1609 348 4e-97
Transcriptional regulators K Contig392 Exig2299 COG1522 97 6e-22
Transcriptional regulators K Contig392 Exig2371 COG1737 80 7e-17
Transcriptional regulators K Contig392 Exig2383 COG1609 125 5e-30
Transcriptional regulators K Contig392 Exig2388 COG1609 299 2e-82
Transcriptional regulators K Contig392 Exig2701 COG1802 42 9e-06
Transcriptional regulators K Contig392 Exig2701 COG2188 69 1e-13
Transcriptional regulators K Contig392 Exig2701 COG2186 54 2e-09
Transcriptional regulators K Contig392 Exig2704 COG1802 51 9e-08
Transcriptional regulators K Contig392 Exig2704 COG2188 196 1e-51
Transcriptional regulators K Contig392 Exig2704 COG2186 74 9e-15
Transcriptional regulators K Contig392 Exig2892 COG1846 63 1e-11
Transcriptional regulators K Contig392 Exig2894 COG1609 231 6e-62
Transcriptional regulators K Contig392 Exig2969 COG1846 59 1e-10
Transcriptional regulators K Contig392 Exig2969 COG1522 40 5e-05
Transcriptional regulators K Contig392 Exig2989 COG1846 48 3e-07
Transcriptional regulators K Contig392 Exig2995 COG1802 126 1e-30
Transcriptional regulators K Contig392 Exig2995 COG2188 45 8e-06
Transcriptional regulators K Contig392 Exig2995 COG2186 76 2e-15
Transcriptional regulators of sugar metabolism K Contig392 Exig0829 COG1349 46 2e-06
Transcriptional regulators of sugar metabolism K Contig392 Exig0894 COG1349 36 0.001
Transcriptional regulators of sugar metabolism K Contig392 Exig1056 COG1349 211 4e-56
Transcriptional regulators of sugar metabolism K Contig392 Exig1150 COG1349 147 8e-37
Transcriptional regulators of sugar metabolism K Contig392 Exig1166 COG1349 36 0.002
Transcriptional regulators of sugar metabolism K Contig392 Exig1360 COG1349 35 0.003
Transcriptional regulators of sugar metabolism K Contig392 Exig1462 COG1349 49 3e-07
Transcriptional regulators of sugar metabolism K Contig392 Exig1824 COG1349 38 5e-04
Transcriptional regulators of sugar metabolism K Contig392 Exig1911 COG1349 36 0.002
Transcriptional regulators of sugar metabolism K Contig392 Exig2103 COG1349 34 0.006
Transcriptional regulators of sugar metabolism K Contig392 Exig2269 COG1349 49 5e-08
Transcriptional regulators of sugar metabolism K Contig392 Exig2704 COG1349 36 0.002
Transcriptional regulators of sugar metabolism K Contig392 Exig2742 COG1349 194 6e-51
Transcriptional regulator/sugar kinase K Contig392 Exig0370 COG1940 180 1e-46
Transcriptional regulator/sugar kinase K Contig392 Exig0874 COG1940 233 2e-62
Transcriptional regulator/sugar kinase K Contig392 Exig1404 COG1940 90 2e-19
Transcriptional regulator/sugar kinase K Contig392 Exig2996 COG1940 38 0.002
COG Name Group Contig Gene COG ID Score Evalue
Transcriptional repressor of class III stress genes K Contig392 Exig0065 COG4463 154 3e-39
Transcription-repair coupling factor (superfamily II helicase) K Contig392 Exig0044 COG1197 1209 0.0
Transcription-repair coupling factor (superfamily II helicase) K Contig392 Exig0618 COG1197 36 0.007
Transcription-repair coupling factor (superfamily II helicase) K Contig392 Exig1817 COG1197 45 1e-05
Transcription-repair coupling factor (superfamily II helicase) K Contig392 Exig1912 COG1197 349 5e-97
Transcription-repair coupling factor (superfamily II helicase) K Contig392 Exig1927 COG1197 68 2e-12
Transcription-repair coupling factor (superfamily II helicase) K Contig392 Exig2416 COG1197 140 4e-34
Transcription-repair coupling factor (superfamily II helicase) K Contig392 Exig2466 COG1197 42 8e-05
Transcription-repair coupling factor (superfamily II helicase) K Contig392 Exig2973 COG1197 40 5e-04

-
SiteMap      Feedback      Life Sciences Division      ORNL     Disclaimer     Webmaster