Top 20 Categories

Top 20 InterPro

131	NULL	NULL
94	IPR003593	AAA+ ATPase, core
69	IPR003439	ABC transporter related
64	IPR001584	Integrase, catalytic core
42	IPR000515	Binding-protein-dependent transport systems inner membrane component
28	IPR005834	Haloacid dehalogenase-like hydrolase
28	IPR003352	Phosphotransferase system, EIIC
24	IPR000182	GCN5-related N-acetyltransferase
20	IPR011608	PRD
20	IPR002345	Lipocalin
20	IPR001789	Response regulator receiver
19	IPR013196	Helix-turn-helix, type 11
19	IPR001387	Helix-turn-helix type 3
18	IPR003594	ATP-binding region, ATPase-like
17	IPR013027	FAD-dependent pyridine nucleotide-disulphide oxidoreductase
17	IPR004701	Phosphotransferase system, fructose subfamily IIA component
16	IPR007114	Major facilitator superfamily
16	IPR001899	Surface protein from Gram-positive cocci, anchor region
16	IPR001100	Pyridine nucleotide-disulphide oxidoreductase, class I
16	IPR000524	Bacterial regulatory protein GntR, HTH

Top 20 HMMPfam

68	PF00005	ABC_tran
57	PF00665	rve
42	PF00528	BPD_transp_1
28	PF02378	PTS_EIIC
28	PF00702	Hydrolase
21	PF00583	Acetyltransf_1
20	PF00874	PRD
19	PF08279	HTH_11
19	PF00072	Response_reg
18	PF02518	HATPase_c
16	PF07992	Pyr_redox_2
16	PF00392	GntR
15	PF07690	MFS_1
15	PF01380	SIS
14	PF03610	EIIA-man
14	PF01610	Transposase_12
14	PF01527	Transposase_8
14	PF00664	ABC_membrane
14	PF00070	Pyr_redox
13	PF05043	Mga

Top 20 HMMTigr

16	TIGR01167	LPXTG_anchor
11	TIGR01494	ATPase_P-type
11	TIGR00830	PTBA
10	TIGR00410	lacE
9	TIGR00231	small_GTP
8	TIGR01484	HAD-SF-IIB
8	TIGR00099	Cof-subfamily
7	TIGR01509	HAD-SF-IA-v3
6	TIGR01076	sortase_fam
5	TIGR01726	HEQRo_perm_3TM
5	TIGR01617	arsC_related
5	TIGR01525	ATPase-IB_hvy
5	TIGR00650	MG442
4	TIGR01655	yxeA_fam
4	TIGR01549	HAD-SF-IA-v1
4	TIGR00826	EIIB_glc
4	TIGR00762	DegV
4	TIGR00401	msrA
3	TIGR02116	toxin_Txe_YoeB
3	TIGR01995	PTS-II-ABC-beta

Top 20 ProfileScan

67	PS50893	ABC_TRANSPORTER_2
56	PS50994	INTEGRASE
49	PS00013	PROKAR_LIPOPROTEIN
42	PS50928	ABC_TM1
24	PS51186	GNAT
20	PS50110	RESPONSE_REGULATORY
19	PS50943	HTH_CROC1
17	PS51096	PTS_EIIA_TYPE_4
16	PS50949	HTH_GNTR
16	PS50850	MFS
15	PS51103	PTS_EIIC_TYPE_1
14	PS51099	PTS_EIIB_TYPE_2
14	PS51094	PTS_EIIA_TYPE_2
14	PS50929	ABC_TM1F
14	PS50109	HIS_KIN
13	PS51192	HELICASE_ATP_BIND_1
13	PS51098	PTS_EIIB_TYPE_1
13	PS50847	GRAM_POS_ANCHORING
12	PS51194	HELICASE_CTER
12	PS01124	HTH_ARAC_FAMILY_2

Top 20 FPrintScan

16	PR00411	PNDRDTASEI
16	PR00368	FADPNR
12	PR00469	PNDRDTASEII
12	PR00119	CATATPASE
12	PR00032	HTHARAC
11	PR00035	HTHGNTR
10	PR00344	BCTRLSENSOR
10	PR00131	GLHYDRLASE1
9	PR00120	HATPASE
9	PR00036	HTHLACI
7	PR00081	GDHRDH
7	PR00080	SDRFAMILY
6	PR00413	HADHALOGNASE
6	PR00326	GTP1OBG
6	PR00315	ELONGATNFCT
6	PR00069	ALDKETRDTASE
5	PR01167	INSADHFAMILY
5	PR01036	TCRTETB
5	PR00039	HTHLYSR
5	PR00037	HTHLACR

Top 20 BlastProDom

67	PD000006	sp_Q8FAW5_ECOL6_Q8FAW5;
20	PD000039	sp_Q9KFS9_BACHD_Q9KFS9;
12	PD001689	sp_Q92ET2_LISIN_Q92ET2;
12	PD000139	sp_Q88ZF2_LACPL_Q88ZF2;
11	PD002243	sp_Q831R2_ENTFA_Q831R2;
10	PD008332	sp_Q839Y0_ENTFA_Q839Y0;
10	PD000329	sp_Q9K850_BACHD_Q9K850;
6	PD001476	sp_Q832L3_ENTFA_Q832L3;
6	PD000288	sp_DKGA_ECOLI_Q46857;
5	PD688335	sp_Q83ZG9_BBBBB_Q83ZG9;
5	PD007286	sp_PTLA_LACLA_P23532;
4	PD532004	sp_Q82ZE5_ENTFA_Q82ZE5;
4	PD003489	sp_Q834H1_ENTFA_Q834H1;
4	PD001263	sp_Q6YH28_ENTFC_Q6YH28;
4	PD001243	sp_Q831U7_ENTFA_Q831U7;
4	PD000819	sp_SR54_METTH_O27376;
3	PD007402	sp_ARGR_LACPL_Q88X36;
3	PD005043	sp_Q837V1_ENTFA_Q837V1;
3	PD002376	sp_Q92ET0_LISIN_Q92ET0;
3	PD002334	sp_Q9YE82_AERPE_Q9YE82;

Top 20 COGs

140	COG4988	ABC-type transport system involved in cytochrome bd biosynthesis ATPase and permease components
138	COG4987	ABC-type transport system involved in cytochrome bd biosynthesis fused ATPase and permease components
138	COG1134	ABC-type polysaccharide/polyol phosphate transport system ATPase component
138	COG1124	ABC-type dipeptide/oligopeptide/nickel transport system ATPase component
138	COG1120	ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components
138	COG0444	ABC-type dipeptide/oligopeptide/nickel transport system ATPase component
136	COG4555	ABC-type Na+ transport system ATPase component
134	COG4615	ABC-type siderophore export system fused ATPase and permease components
71	COG2274	ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain
70	COG1136	ABC-type antimicrobial peptide transport system ATPase component
70	COG1135	ABC-type metal ion transport system ATPase component
70	COG1132	ABC-type multidrug transport system ATPase and permease components
70	COG1131	ABC-type multidrug transport system ATPase component
70	COG1127	ABC-type transport system involved in resistance to organic solvents ATPase component
70	COG1123	ATPase components of various ABC-type transport systems contain duplicated ATPase
70	COG1121	ABC-type Mn/Zn transport systems ATPase component
70	COG0488	ATPase components of ABC transporter with duplicated ATPase domains
69	COG4608	ABC-type oligopeptide transport system ATPase component
69	COG4178	ABC-type uncharacterized transport system permease and ATPase components
69	COG4172	ABC-type uncharacterized transport system duplicated ATPase component

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