| Kingdom |
Category |
Genus/Species |
Count |
|
|
|
34 |
| Archaea |
|
|
15 |
| |
|
|
34 |
| |
Euryarchaeota |
|
14 |
| |
|
Archaeoglobus fulgidus (afu) |
3 |
| |
|
Methanococcoides burtonii (mbu) |
2 |
| |
|
Methanocorpusculum labreanum (mla) |
1 |
| |
|
Methanosarcina mazei (mma) |
2 |
| |
|
Methanobrevibacter smithii ATCC 35061 (msi) |
2 |
| |
|
Methanosaeta thermophila (mtp) |
1 |
| |
|
Uncultured methanogenic archaeon RC-I (rci) |
1 |
| |
|
Thermococcus kodakaraensis (tko) |
1 |
| |
|
Thermoplasma volcanium (tvo) |
1 |
| |
Korarchaeota |
|
1 |
| |
|
Candidatus Korarchaeum cryptofilum (kcr) |
1 |
| Bacteria |
|
|
1982 |
| |
Acidobacteria |
|
5 |
| |
|
Acidobacteria bacterium (aba) |
1 |
| |
|
Solibacter usitatus (sus) |
4 |
| |
Actinobacteria |
|
27 |
| |
|
Frankia sp. CcI3 (fra) |
1 |
| |
|
Kineococcus radiotolerans (kra) |
1 |
| |
|
Mycobacterium marinum M (mmi) |
1 |
| |
|
Mycobacterium smegmatis (msm) |
1 |
| |
|
Mycobacterium vanbaalenii (mva) |
1 |
| |
|
Nocardioides sp. JS614 (nca) |
1 |
| |
|
Rhodococcus sp. RHA1 (rha) |
3 |
| |
|
Salinispora arenicola (saq) |
3 |
| |
|
Streptomyces coelicolor (sco) |
2 |
| |
|
Streptomyces griseus (sgr) |
8 |
| |
|
Streptomyces avermitilis (sma) |
3 |
| |
|
Thermobifida fusca (tfu) |
2 |
| |
Bacteroides |
|
8 |
| |
|
Bacteroides thetaiotaomicron (bth) |
1 |
| |
|
Cytophaga hutchinsonii (chu) |
1 |
| |
|
Flavobacterium johnsoniae (fjo) |
3 |
| |
|
Gramella forsetii (gfo) |
1 |
| |
|
Parabacteroides distasonis (pdi) |
1 |
| |
|
Salinibacter ruber (sru) |
1 |
| |
Cyanobacteria |
|
7 |
| |
|
Acaryochloris marina (amr) |
2 |
| |
|
Gloeobacter violaceus (gvi) |
2 |
| |
|
Nostoc punctiforme (npu) |
1 |
| |
|
Synechococcus sp. WH7803 (syx) |
1 |
| |
|
Trichodesmium erythraeum (ter) |
1 |
| |
Deinococcus-Thermus |
|
1 |
| |
|
Deinococcus geothermalis (dge) |
1 |
| |
Firmicutes |
|
30 |
| |
|
Alkaliphilus oremlandii (aoe) |
1 |
| |
|
Bacillus amyloliquefaciens (bay) |
1 |
| |
|
Bacillus licheniformis DSM13 (bld) |
3 |
| |
|
Bacillus subtilis (bsu) |
2 |
| |
|
Bacillus thuringiensis 97-27 (btk) |
1 |
| |
|
Clostridium acetobutylicum (cac) |
1 |
| |
|
Clostridium beijerinckii (cbe) |
1 |
| |
|
Clostridium botulinum F Langeland (cbf) |
1 |
| |
|
Clostridium botulinum A3 Loch Maree (cbl) |
1 |
| |
|
Clostridium botulinum A ATCC 3502 (cbo) |
1 |
| |
|
Clostridium botulinum E3 (cbt) |
1 |
| |
|
Clostridium perfringens ATCC 13124 (cpf) |
1 |
| |
|
Candidatus Desulforudis audaxviator (dau) |
1 |
| |
|
Desulfotomaculum reducens (drm) |
1 |
| |
|
Desulfitobacterium hafniense (dsy) |
1 |
| |
|
Exiguobacterium sibiricum (esi) |
1 |
| |
|
Lysinibacillus sphaericus (lsp) |
1 |
| |
|
Natranaerobius thermophilus (nth) |
1 |
| |
|
Pelotomaculum thermopropionicum (pth) |
2 |
| |
|
Streptococcus agalactiae A909 (serotype Ia) (sak) |
1 |
| |
|
Symbiobacterium thermophilum (sth) |
1 |
| |
|
Thermoanaerobacter pseudethanolicus (tpd) |
2 |
| |
|
Thermoanaerobacter tengcongensis (tte) |
3 |
| |
Green nonsulfur bacteria |
|
1268 |
| |
|
Chloroflexus aurantiacus (cau) |
4 |
| |
|
Dehalococcoides ethenogenes (det) |
1252 |
| |
|
Herpetosiphon aurantiacus (hau) |
6 |
| |
|
Roseiflexus castenholzii DSM13941 (rca) |
4 |
| |
|
Roseiflexus sp. RS-1 (rrs) |
2 |
| |
Green sulfur bacteria |
|
5 |
| |
|
Chlorobaculum parvum NCIB 8327 (cpc) |
1 |
| |
|
Prosthecochloris aestuarii (paa) |
3 |
| |
|
Pelodictyon luteolum (plt) |
1 |
| |
Hyperthermophilic bacteria |
|
6 |
| |
|
Dictyoglomus thermophilum (dth) |
4 |
| |
|
Fervidobacterium nodosum (fno) |
1 |
| |
|
Thermotoga lettingae (tle) |
1 |
| |
Planctomyces |
|
1 |
| |
|
Rhodopirellula baltica (rba) |
1 |
| |
Proteobacteria |
|
610 |
| |
|
Acidovorax avenae (aav) |
1 |
| |
|
Acinetobacter baumannii ACICU (abc) |
2 |
| |
|
Arcobacter butzleri (abu) |
1 |
| |
|
Acidiphilium cryptum JF-5 (acr) |
1 |
| |
|
Anaeromyxobacter dehalogenans (ade) |
3 |
| |
|
Alkalilimnicola ehrlichei (aeh) |
2 |
| |
|
Aeromonas hydrophila (aha) |
1 |
| |
|
Alteromonas macleodii (amc) |
1 |
| |
|
Aeromonas salmonicida (asa) |
2 |
| |
|
Azoarcus sp. BH72 (azo) |
2 |
| |
|
Burkholderia cepacia (bam) |
1 |
| |
|
Bordetella bronchiseptica (bbr) |
1 |
| |
|
Bradyrhizobium sp. BTAi1 (bbt) |
2 |
| |
|
Burkholderia cenocepacia HI2424 (bch) |
2 |
| |
|
Burkholderia cenocepacia J2315 (bcj) |
1 |
| |
|
Burkholderia cenocepacia MC0-3 (bcm) |
2 |
| |
|
Bradyrhizobium japonicum (bja) |
3 |
| |
|
Burkholderia multivorans ATCC 17616 (Tohoku) (bmj) |
2 |
| |
|
Burkholderia mallei NCTC 10247 (bmn) |
1 |
| |
|
Bordetella parapertussis (bpa) |
1 |
| |
|
Burkholderia pseudomallei 668 (bpd) |
2 |
| |
|
Burkholderia phymatum (bph) |
1 |
| |
|
Burkholderia pseudomallei 1106a (bpl) |
2 |
| |
|
Burkholderia pseudomallei 1710b (bpm) |
4 |
| |
|
Bordetella petrii (bpt) |
5 |
| |
|
Bradyrhizobium sp. ORS278 (bra) |
1 |
| |
|
Burkholderia thailandensis (bte) |
3 |
| |
|
Burkholderia sp. 383 (bur) |
5 |
| |
|
Burkholderia vietnamiensis (bvi) |
5 |
| |
|
Burkholderia xenovorans (bxe) |
6 |
| |
|
Caulobacter sp. K31 (cak) |
1 |
| |
|
Caulobacter crescentus (ccr) |
2 |
| |
|
Cellvibrio japonicus (cja) |
5 |
| |
|
Colwellia psychrerythraea (cps) |
2 |
| |
|
Chromohalobacter salexigens (csa) |
2 |
| |
|
Cupriavidus taiwanensis (cti) |
2 |
| |
|
Chromobacterium violaceum (cvi) |
6 |
| |
|
Delftia acidovorans (dac) |
2 |
| |
|
Dechloromonas aromatica (dar) |
1 |
| |
|
Candidatus Desulfococcus oleovorans (dol) |
1 |
| |
|
Desulfotalea psychrophila (dps) |
2 |
| |
|
Azoarcus sp. EbN1 (eba) |
1 |
| |
|
Escherichia coli CFT073 (UPEC) (ecc) |
1 |
| |
|
Escherichia coli O157 Sakai (EHEC) (ecs) |
2 |
| |
|
Erwinia tasmaniensis (eta) |
1 |
| |
|
Geobacter bemidjiensis (gbm) |
1 |
| |
|
Geobacter lovleyi (glo) |
2 |
| |
|
Geobacter sulfurreducens (gsu) |
4 |
| |
|
Geobacter uraniumreducens (gur) |
1 |
| |
|
Hahella chejuensis (hch) |
8 |
| |
|
Halorhodospira halophila (hha) |
1 |
| |
|
Hyphomonas neptunium (hne) |
3 |
| |
|
Jannaschia sp. CCS1 (jan) |
1 |
| |
|
Klebsiella pneumoniae (kpn) |
1 |
| |
|
Magnetospirillum magneticum (mag) |
1 |
| |
|
Methylococcus capsulatus (mca) |
2 |
| |
|
Mesorhizobium sp. BNC1 (mes) |
4 |
| |
|
Methylobacterium sp. 4-46 (met) |
1 |
| |
|
Methylobacillus flagellatus (mfa) |
2 |
| |
|
Mesorhizobium loti (mlo) |
1 |
| |
|
Maricaulis maris (mmr) |
3 |
| |
|
Minibacterium massiliensis (mms) |
2 |
| |
|
Methylobacterium populi (mpo) |
1 |
| |
|
Methylobacterium radiotolerans (mrd) |
1 |
| |
|
Myxococcus xanthus (mxa) |
17 |
| |
|
Novosphingobium aromaticivorans (nar) |
1 |
| |
|
Nitrosomonas europaea (neu) |
1 |
| |
|
Nitrobacter hamburgensis (nha) |
5 |
| |
|
Neisseria meningitidis 053442 (serogroup C) (nmn) |
2 |
| |
|
Nitrosospira multiformis (nmu) |
1 |
| |
|
Nitrosococcus oceani (noc) |
2 |
| |
|
Nitrobacter winogradskyi (nwi) |
1 |
| |
|
Pseudomonas aeruginosa PA7 (pap) |
6 |
| |
|
Pseudoalteromonas atlantica (pat) |
2 |
| |
|
Pseudomonas entomophila (pen) |
1 |
| |
|
Pseudomonas fluorescens Pf-5 (pfl) |
7 |
| |
|
Pseudomonas fluorescens Pf0-1 (pfo) |
5 |
| |
|
Parvibaculum lavamentivorans (pla) |
2 |
| |
|
Photorhabdus luminescens (plu) |
1 |
| |
|
Proteus mirabilis (pmr) |
1 |
| |
|
Pseudomonas mendocina (pmy) |
1 |
| |
|
Polaromonas naphthalenivorans (pna) |
1 |
| |
|
Pseudomonas putida F1 (ppf) |
1 |
| |
|
Pseudomonas putida GB-1 (ppg) |
2 |
| |
|
Pseudomonas stutzeri (psa) |
3 |
| |
|
Pseudomonas syringae pv. phaseolicola 1448A (psp) |
1 |
| |
|
Pseudomonas syringae pv. tomato DC3000 (pst) |
1 |
| |
|
Phenylobacterium zucineum (pzu) |
3 |
| |
|
Rhizobium etli CIAT 652 (rec) |
1 |
| |
|
Ralstonia eutropha H16 (reh) |
4 |
| |
|
Rhizobium etli CFN 42 (ret) |
2 |
| |
|
Ralstonia eutropha JMP134 (reu) |
5 |
| |
|
Rhodoferax ferrireducens (rfr) |
2 |
| |
|
Rhizobium leguminosarum (rle) |
4 |
| |
|
Ralstonia metallidurans (rme) |
1 |
| |
|
Rhodopseudomonas palustris BisB18 (rpc) |
2 |
| |
|
Ralstonia pickettii (rpi) |
5 |
| |
|
Rhodopseudomonas palustris TIE-1 (rpt) |
2 |
| |
|
Rhodospirillum rubrum (rru) |
3 |
| |
|
Ralstonia solanacearum (rso) |
1 |
| |
|
Sphingopyxis alaskensis (sal) |
1 |
| |
|
Syntrophus aciditrophicus (sat) |
2 |
| |
|
Shewanella amazonensis (saz) |
1 |
| |
|
Shewanella baltica OS155 (sbl) |
1 |
| |
|
Shewanella baltica OS195 (sbn) |
1 |
| |
|
Sorangium cellulosum (scl) |
13 |
| |
|
Saccharophagus degradans (sde) |
2 |
| |
|
Shewanella denitrificans (sdn) |
2 |
| |
|
Syntrophobacter fumaroxidans (sfu) |
1 |
| |
|
Shigella flexneri 8401 (serotype 5b) (sfv) |
1 |
| |
|
Silicibacter sp. TM1040 (sit) |
1 |
| |
|
Sinorhizobium meliloti (sme) |
1 |
| |
|
Stenotrophomonas maltophilia (sml) |
60 |
| |
|
Stenotrophomonas maltophilia R551-3 (smt) |
70 |
| |
|
Serratia proteamaculans (spe) |
2 |
| |
|
Shewanella pealeana (spl) |
1 |
| |
|
Shewanella sediminis (sse) |
2 |
| |
|
Sulfurovum sp. NBC37-1 (sun) |
1 |
| |
|
Shewanella woodyi ATCC51908 (swd) |
3 |
| |
|
Sphingomonas wittichii (swi) |
3 |
| |
|
Thiobacillus denitrificans (tbd) |
3 |
| |
|
Verminephrobacter eiseniae (vei) |
1 |
| |
|
Candidatus Vesicomyosocius okutanii (vok) |
1 |
| |
|
Xanthomonas axonopodis (xac) |
48 |
| |
|
Xanthobacter autotrophicus (xau) |
1 |
| |
|
Xanthomonas campestris pv. campestris B100 (xca) |
66 |
| |
|
Xanthomonas campestris pv. campestris 8004 (xcb) |
17 |
| |
|
Xanthomonas campestris pv. campestris ATCC 33913 (xcc) |
3 |
| |
|
Xanthomonas campestris pv. vesicatoria (xcv) |
33 |
| |
|
Xylella fastidiosa 9a5c (xfa) |
2 |
| |
|
Xylella fastidiosa M12 (xfm) |
1 |
| |
|
Xylella fastidiosa M23 (xfn) |
2 |
| |
|
Xanthomonas oryzae MAFF311018 (xom) |
4 |
| |
|
Xanthomonas oryzae KACC10331 (xoo) |
3 |
| |
|
Xanthomonas oryzae PXO99A (xop) |
18 |
| |
|
Yersinia pestis Pestoides (ypp) |
1 |
| |
Spirochete |
|
1 |
| |
|
Leptospira biflexa serovar Patoc Patoc 1 (Ames) (lbf) |
1 |
| |
Synergistetes |
|
5 |
| |
|
Caldicellulosiruptor saccharolyticus (csc) |
1 |
| |
|
Syntrophomonas wolfei (swo) |
4 |
| |
Verrucomicrobia |
|
8 |
| |
|
Methylacidiphilum infernorum (min) |
1 |
| |
|
Opitutus terrae (ote) |
7 |
| Eukaryotes |
|
|
14 |
| |
Animals |
|
5 |
| |
|
Danio rerio (zebrafish) (dre) |
1 |
| |
|
Drosophila willistoni (dwi) |
1 |
| |
|
Drosophila yakuba (dya) |
1 |
| |
|
Rattus norvegicus (rat) (rno) |
1 |
| |
|
Trichoplax adhaerens (tad) |
1 |
| |
Fungi |
|
6 |
| |
|
Aspergillus fumigatus (afm) |
1 |
| |
|
Aspergillus nidulans (ani) |
1 |
| |
|
Magnaporthe grisea (mgr) |
2 |
| |
|
Saccharomyces cerevisiae (sce) |
1 |
| |
|
Yarrowia lipolytica (yli) |
1 |
| |
Protists |
|
3 |
| |
|
Leishmania major (lma) |
1 |
| |
|
Monosiga brevicollis (mbr) |
1 |
| |
|
Trypanosoma brucei (tbr) |
1 |
| NULL |
|
|
48 |
| TOTAL |
|
|
2093 |
![[space]](http://compbio.ornl.gov/public/images/bluespacer.gif){kind=small}
![[space]](http://maple.lsd.ornl.gov/common/images/bluespacer.gif){kind=small}