Top 20 Categories

Top 20 InterPro

101	NULL	NULL
56	IPR001450	4Fe-4S ferredoxin, iron-sulphur binding
48	IPR003593	AAA+ ATPase, core
42	IPR006311	Twin-arginine translocation pathway signal
41	IPR001789	Response regulator receiver
34	IPR012832	Reductive dehalogenase
33	IPR003594	ATP-binding region, ATPase-like
33	IPR003439	ABC transporter related
27	IPR005467	Histidine kinase
27	IPR004358	Histidine kinase related protein, C-terminal
24	IPR003661	Histidine kinase A, N-terminal
22	IPR007197	Radical SAM
22	IPR000182	GCN5-related N-acetyltransferase
19	IPR001867	Transcriptional regulatory protein, C-terminal
19	IPR000014	PAS
15	IPR000835	Bacterial regulatory protein, MarR
14	IPR006195	Aminoacyl-tRNA synthetase, class II
13	IPR013767	PAS fold
13	IPR011701	Major facilitator superfamily MFS-1
13	IPR007114	Major facilitator superfamily

Top 20 HMMPfam

39	PF00072	Response_reg
38	PF00037	Fer4
33	PF02518	HATPase_c
33	PF00005	ABC_tran
24	PF00512	HisKA
22	PF04055	Radical_SAM
20	PF00583	Acetyltransf_1
18	PF00486	Trans_reg_C
15	PF01047	MarR
13	PF07690	MFS_1
13	PF00989	PAS
12	PF08242	Methyltransf_12
11	PF08448	PAS_4
11	PF00528	BPD_transp_1
10	PF08447	PAS_3
10	PF08241	Methyltransf_11
10	PF00196	GerE
9	PF07992	Pyr_redox_2
9	PF07963	N_methyl
9	PF03144	GTP_EFTU_D2

Top 20 HMMTigr

42	TIGR01409	TAT_signal_seq
34	TIGR02486	RDH
19	TIGR00229	sensory_box
11	TIGR00231	small_GTP
10	TIGR02532	IV_pilin_GFxxxE
7	TIGR00762	DegV
4	TIGR00290	MJ0570_dom
4	TIGR00277	HDIG
3	TIGR02937	sigma70-ECF
3	TIGR02605	CxxC_CxxC_SSSS
3	TIGR01727	oligo_HPY
3	TIGR01420	pilT_fam
3	TIGR01352	tonB_Cterm
3	TIGR01135	glmS
3	TIGR00380	cobD
3	TIGR00125	cyt_tran_rel
2	TIGR02504	NrdJ_Z
2	TIGR02087	LEUD_arch
2	TIGR02086	IPMI_arch
2	TIGR01850	argC

Top 20 ProfileScan

51	PS00013	PROKAR_LIPOPROTEIN
41	PS50110	RESPONSE_REGULATORY
32	PS50893	ABC_TRANSPORTER_2
27	PS50109	HIS_KIN
21	PS51186	GNAT
17	PS50112	PAS
14	PS50995	HTH_MARR_2
14	PS50862	AA_TRNA_LIGASE_II
13	PS50850	MFS
11	PS51192	HELICASE_ATP_BIND_1
11	PS50928	ABC_TM1
10	PS50977	HTH_TETR_2
10	PS50113	PAC
10	PS50043	HTH_LUXR_2
8	PS51194	HELICASE_CTER
7	PS51012	ABC_TM2
7	PS50975	ATP_GRASP
7	PS50943	HTH_CROC1
7	PS50889	S4
6	PS50931	HTH_LYSR

Top 20 FPrintScan

27	PR00344	BCTRLSENSOR
19	PR00353	4FE4SFRDOXIN
10	PR00368	FADPNR
10	PR00038	HTHLUXR
8	PR00411	PNDRDTASEI
7	PR00598	HTHMARR
7	PR00469	PNDRDTASEII
7	PR00315	ELONGATNFCT
6	PR00455	HTHTETR
6	PR00154	AMPBINDING
6	PR00096	GATASE
5	PR01437	NUOXDRDTASE4
5	PR00885	BCTERIALGSPH
5	PR00834	PROTEASES2C
5	PR00081	GDHRDH
5	PR00080	SDRFAMILY
5	PR00069	ALDKETRDTASE
4	PR01434	NADHDHGNASE5
4	PR01415	ANKYRIN
4	PR00723	SUBTILISIN

Top 20 BlastProDom

41	PD000039	sp_P73828_SYNY3_P73828;
29	PD000006	sp_Q8PGH7_XANAC_Q8PGH7;
19	PD000329	sp_Q8DFT0_VIBVU_Q8DFT0;
11	PD000307	sp_Q7NIH3_GLOVI_Q7NIH3;
6	PD000288	sp_Q9A528_CAUCR_Q9A528;
4	PD003859	sp_Q9S5X7_THEMA_Q9S5X7;
4	PD000739	sp_Q9PD62_XYLFA_Q9PD62;
4	PD000139	sp_Q9WYM6_THEMA_Q9WYM6;
3	PD688335	sp_Q6LB76_OLICA_Q6LB76;
3	PD002003	sp_Q8RAH1_THETN_Q8RAH1;
3	PD001610	sp_Q97D83_CLOAB_Q97D83;
3	PD001248	sp_Q8PPH1_XANAC_Q8PPH1;
3	PD001057	sp_Q9RBK1_XANCI_Q9RBK1;
3	PD000666	sp_Q6F7F8_ACIAD_Q6F7F8;
3	PD000511	sp_LE22_ARCFU_O28084;
2	PD186100	sp_IF2_THETN_Q8RA37;
2	PD038622	sp_Q8X2W6_ECO57_Q8X2W6;
2	PD018041	sp_Q7MR61_WOLSU_Q7MR61;
2	PD010761	sp_Q8EQD4_OCEIH_Q8EQD4;
2	PD007415	sp_Q93MC6_CLOPE_Q93MC6;

Top 20 COGs

86	COG3437	Response regulator containing a CheY-like receiver domain and an HD-GYP domain
84	COG0745	Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
82	COG2197	Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
78	COG4565	Response regulator of citrate/malate metabolism
76	COG3279	Response regulator of the LytR/AlgR family
76	COG2201	Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
72	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
72	COG1120	ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components
70	COG4988	ABC-type transport system involved in cytochrome bd biosynthesis ATPase and permease components
68	COG4987	ABC-type transport system involved in cytochrome bd biosynthesis fused ATPase and permease components
68	COG4555	ABC-type Na+ transport system ATPase component
68	COG1124	ABC-type dipeptide/oligopeptide/nickel transport system ATPase component
68	COG0444	ABC-type dipeptide/oligopeptide/nickel transport system ATPase component
64	COG4615	ABC-type siderophore export system fused ATPase and permease components
64	COG1134	ABC-type polysaccharide/polyol phosphate transport system ATPase component
42	COG2204	Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains
42	COG0643	Chemotaxis protein histidine kinase and related kinase
41	COG4753	Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
41	COG3706	Response regulator containing a CheY-like receiver domain and a GGDEF domain
40	COG1245	Predicted ATPase RNase L inhibitor (RLI) homolog

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