ID Contig1001 standard; DNA; UNC; 4374 BP. XX DE Contig1001.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..4374 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene 286..468 FT /locus_tag="DeVSDRAFT_0001" FT /colour=11 FT CDS 286..468 FT /locus_tag="DeVSDRAFT_0001" FT /product="TonB-dependent receptor" FT /note="SPTR: Q8P7E6 TonB-dependent receptor. Xanthomonas campestris pv. campestris." FT /note="KEGG: xcb:XC_1451 TonB-dependent receptor " FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation="VGANLHAGDNWEFALTGSNVSNELGLTEGNVRVPGAATGGVFMGRPIAGRSYLFSAAYKW*" FT gene 709..1956 FT /locus_tag="DeVSDRAFT_0002" FT /colour=4 FT CDS 709..1956 FT /locus_tag="DeVSDRAFT_0002" FT /product="major facilitator superfamily MFS_1" FT /note="PFAM: major facilitator superfamily MFS_1" FT /note="SPTR: Q487N5 Putative membrane protein. Colwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibrio psychroerythus)." FT /note="KEGG: cps:CPS_0981 hypothetical protein " FT /note="COGs: COG0738 Fucose permease category=G" FT /note="InterPro IPR007114:IPR011701" FT /codon_start=1 FT /transl_table=11 FT /colour=4 FT /translation=" FT MTVATAHRRRMIAAMILTYMMFGVLLNSVGTVILQSIQGFGIDKAQASILEAFKDLPIAVVSFLTASLLPRLGYRRAMML FT GLGLVLVACALMPLLASFWMTKALFIATGVAFALVKVSVYSSIGLLTDSKQAHASLTSIIEGWFMVGVLAGYWIFAWFID FT PQSPGDPVWLDVYWLLAGIAAVIIALLAGARLDESAARDGHAAADSFLDMFRLIALPLVAAFLASAFLYVLIEQSVGTWL FT PTFNREILHLPAKMSVQAASIFAVSLALGRLGAGLALRRVPWHWLLIGCVLAMGLLVLLALPLARGAQPQADMSWMSAPP FT AAFVFPLIGLFMAPIYPAINSVVLSSLPKSRHAAMTGLIVVFSALGGTTGSFITGQLFARIGGGAFYLSLVPMTLLVLTI FT ALLKRQSARAEAAAA* FT " FT gene 2123..4186 FT /locus_tag="DeVSDRAFT_0003" FT /colour=13 FT CDS 2123..4186 FT /locus_tag="DeVSDRAFT_0003" FT /product="conserved hypothetical protein" FT /note="SPTR: Q3EK05 Hypothetical cytosolic protein. Bacillus thuringiensis serovar israelensis ATCC 35646." FT /note="KEGG: hch:HCH_04103 hypothetical protein " FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MNGIFLRRRHKFQLKPGDGGASAVQVAMVQRELEQLGFALTPQALERLHTQSPAQLAQCLRELRPALAKMTGAHRTLRPL FT FPDFPAGVLRVEEAELYQRAMLHYVTRLQLHEQQPEPTPPLRGGRALRLIDLGSREEFEAVCTRLAASPTSLSQQDKDDL FT GWFVGQYREHVLRMLPERIPFKENFAYIAAALLRRAPSPLSEAFVRERLATATDVLRVAVAWCEGDVSLAEPTRFRRFPR FT ALRRLLLQALEACGDPTEDMLRWQERWKRLGEYLHPGDYRERLPATWNAFQTLREDRAFERFNSAVERDLAAGRGDDALL FT RLSARPGELARRLDHLLRSGADTEQVLQRLRSAAPRVAAPLLLRLHSHFRHRGRAPLRVFFPKGDTARAWGTRDRRAPLP FT DGAADAGMAICAQALRERFAERAPLGDCWIDPALRELRAPLAQRAASRSLRTLTRGSRVALPDARFVRLFLWGTNGRSRT FT DIDLSAAFFDREFGFVDTISYYNLRGYGGHHSGDIVDAPKGAAEFIDLELPLLRERGIGYVAVSIHSYTEQPYCDLPECF FT AGWMARSDIDSGEPFEARTVHDRVDLASRQNSCLPFVLGLERGQAVWCDVGIGGNPRWNNAANQLSGISLILRAMEYDAS FT PDLYTLFELHAQARGRLVSERAQAATVFAADGDVDPFDVDRIRAEFL* FT " FT misc_feature order(742..810,853..921,940..1008,1018..1086,1123..1182, FT 1210..1278,1336..1404,1447..1515,1552..1620,1672..1740, FT 1777..1845,1858..1917) FT /colour=11 FT /locus_tag="DeVSDRAFT_0002" FT /note="12 probable transmembrane helices predicted by FT TMHMM2.0" FT sig_peptide 709..852 FT /colour=11 FT /locus_tag="DeVSDRAFT_0002" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 0.917) with cleavage site probability 0.773 at FT residue 48" SQ Sequence 4374 BP; 655 A; 1543 C; 1440 G; 735 T; 1 other; AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA 60 AAAACACCTC CCCAAAACGG GAACTAGCCG TCCTAGAGAA CTACGCGAGT TCACCGGCAA 120 CCCAGGTGAT GCGCCAGCCC AAGCAGCAGT TCCGCTTCAC CCNCGAGCTA TTACTGGACG 180 CTGCCGTTCG GCGACCTGAA GGTCTTCGCC ACCTACTCGC GCATCGGCGA TCGCTATGCG 240 GATCTGGCCA ACACCCAGAA GCTGCCCTCC TACCACACGC TGGATGTGGG CGCGAACCTG 300 CACGCAGGCG ATAACTGGGA GTTCGCGCTC ACCGGCAGCA ACGTCAGCAA CGAGCTCGGT 360 TTAACCGAGG GCAATGTGCG CGTGCCGGGC GCGGCAACCG GCGGGGTGTT CATGGGGCGG 420 CCGATTGCGG GGCGGTCTTA TTTGTTCTCG GCGGCTTATA AGTGGTGATG GGTTAGCCCT 480 GCCCTCATCC GGCCCTTCGG GCCACCTTCT CCCGCTAACG GGAGAAGGAA CAGCCAGCGA 540 CGCCGCTGCT TGAAGCCCCT CTCCCGCCGC CGCTTGAAGC CCCTTCTCCG GCAGGCGCTT 600 GAAGCCCCTC TCCCGCTCGC GGGAGAGGGG TTGGGGTGAG GGCCGCCCCT CGCCCGCGTC 660 GCCCGCATGC CGCACGATCC GTACGCAGCC ACCGTCCCCG GAGCCCGCAT GACCGTCGCC 720 ACCGCCCACC GCCGCCGCAT GATCGCGGCG ATGATCCTGA CCTACATGAT GTTCGGGGTC 780 CTGCTCAACA GCGTCGGCAC GGTGATCCTG CAGTCGATCC AGGGCTTCGG CATCGACAAG 840 GCCCAGGCGA GCATCCTGGA GGCGTTCAAG GATCTGCCGA TCGCCGTGGT CTCCTTCCTC 900 ACCGCCTCGC TGCTGCCACG GTTGGGCTAT CGGCGGGCGA TGATGCTCGG CCTCGGCCTG 960 GTCCTGGTCG CCTGCGCGTT GATGCCGCTG CTGGCCTCGT TCTGGATGAC CAAGGCCTTG 1020 TTCATCGCCA CCGGCGTCGC CTTCGCCCTG GTCAAGGTGT CGGTGTATTC CTCCATCGGC 1080 CTGCTCACCG ACTCCAAGCA GGCCCACGCC AGCCTCACCA GCATCATCGA AGGCTGGTTC 1140 ATGGTCGGCG TGCTCGCCGG CTACTGGATC TTCGCCTGGT TCATCGATCC GCAATCGCCG 1200 GGCGATCCGG TCTGGCTCGA CGTCTACTGG CTGCTGGCCG GCATCGCCGC GGTCATCATC 1260 GCCTTGCTCG CCGGCGCCCG GCTCGACGAG AGCGCCGCGC GCGACGGCCA CGCCGCCGCC 1320 GATTCCTTCC TCGACATGTT CCGCCTGATC GCCCTGCCCC TGGTCGCCGC GTTCCTGGCC 1380 TCGGCGTTCC TGTACGTGCT GATCGAACAG AGCGTGGGCA CGTGGCTGCC GACCTTCAAC 1440 CGCGAAATCC TGCACCTGCC GGCGAAGATG AGCGTGCAGG CGGCGAGCAT CTTCGCCGTA 1500 TCGCTGGCGC TGGGCCGGCT CGGCGCCGGG CTGGCGCTGC GGCGGGTGCC GTGGCACTGG 1560 CTGCTGATCG GCTGCGTGCT GGCGATGGGC CTGCTGGTGC TGCTGGCGCT GCCACTGGCG 1620 CGCGGCGCCC AACCGCAAGC GGACATGAGC TGGATGAGCG CGCCGCCGGC CGCGTTCGTG 1680 TTCCCGCTGA TCGGTCTGTT CATGGCGCCG ATCTATCCAG CGATCAATTC GGTCGTGCTC 1740 AGCTCACTGC CCAAGTCGCG GCACGCGGCG ATGACCGGGC TGATCGTGGT GTTCTCCGCG 1800 CTCGGCGGCA CCACCGGTTC GTTCATCACC GGCCAGTTGT TCGCGCGCAT CGGCGGCGGC 1860 GCGTTCTATC TGTCGCTGGT GCCGATGACG CTGCTGGTGC TGACCATCGC CTTGCTGAAA 1920 CGGCAGTCGG CGCGCGCCGA AGCCGCTGCC GCCTGACCGG CGGTCTAGGC GCAGCGCGAC 1980 GGCCGGGCTA TGCTCGCGGC GTGGCTATGG GCGTCCTTCC TTCTCTCTGA AACTAGGGTG 2040 CCCGCTTCCC ACACGGCCCG CTTCGGCGGG CCTTTTCATA TCTGCCGGAT TCGTTCTCGA 2100 ATTCGCAACG CCGGAGACAG CGATGAACGG AATCTTCCTG CGCCGCCGAC ACAAGTTCCA 2160 GCTCAAGCCC GGCGACGGCG GTGCCAGCGC GGTGCAAGTG GCGATGGTGC AGCGCGAGCT 2220 GGAGCAACTC GGCTTCGCGC TGACCCCGCA GGCGCTGGAG CGCCTGCACA CCCAATCGCC 2280 CGCGCAACTG GCGCAATGCT TGCGCGAACT GCGCCCGGCG CTGGCCAAGA TGACCGGCGC 2340 GCACCGCACG CTGCGGCCGC TGTTTCCCGA TTTCCCGGCC GGCGTGCTGC GGGTAGAGGA 2400 AGCGGAGCTG TACCAACGGG CGATGCTGCA TTACGTCACC CGGCTGCAAC TGCACGAACA 2460 ACAGCCCGAG CCCACACCGC CGTTGCGCGG CGGCCGCGCG CTGCGGCTGA TCGACCTGGG 2520 CAGCCGCGAG GAATTCGAAG CCGTCTGCAC CCGCCTGGCC GCTTCGCCGA CCTCGCTGTC 2580 GCAGCAGGAC AAGGACGACC TGGGCTGGTT CGTCGGCCAG TACCGCGAGC ACGTGCTGCG 2640 GATGCTGCCG GAGCGGATTC CGTTCAAGGA GAACTTCGCC TACATCGCCG CCGCCCTGCT 2700 ACGGCGCGCG CCGAGCCCGC TCAGCGAGGC TTTCGTGCGC GAACGCCTGG CCACCGCCAC 2760 CGACGTGCTG CGCGTGGCCG TGGCCTGGTG CGAGGGCGAT GTGTCGCTGG CCGAGCCGAC 2820 CCGCTTCCGC CGCTTCCCGC GCGCGCTGCG GCGCTTGCTG CTGCAGGCGC TGGAAGCCTG 2880 CGGCGATCCC ACCGAGGACA TGCTGCGCTG GCAGGAGCGC TGGAAGCGCC TGGGCGAGTA 2940 TCTACATCCG GGCGATTACC GCGAGCGCCT GCCGGCGACC TGGAACGCGT TCCAGACCTT 3000 GCGCGAGGAC CGCGCGTTCG AACGTTTCAA CAGCGCGGTC GAGCGCGACC TCGCCGCCGG 3060 CCGCGGCGAC GACGCCTTGC TGCGCCTGAG CGCGCGCCCC GGCGAACTGG CCCGGCGCCT 3120 GGACCATCTG CTGCGCAGCG GCGCCGACAC CGAGCAAGTG CTGCAGCGCT TGCGCAGCGC 3180 CGCGCCGCGC GTGGCCGCGC CGCTGCTGCT GCGGCTGCAC AGCCACTTTC GCCATCGCGG 3240 CCGCGCGCCG TTGCGGGTGT TCTTTCCCAA GGGCGACACC GCGCGCGCCT GGGGCACCCG 3300 CGACCGTCGC GCGCCGCTGC CGGACGGCGC CGCCGACGCC GGCATGGCGA TCTGCGCGCA 3360 GGCGCTGCGC GAACGCTTCG CCGAACGCGC GCCGCTGGGC GACTGCTGGA TCGACCCGGC 3420 CCTGCGCGAG CTGCGCGCGC CGCTGGCGCA ACGCGCGGCC TCGCGTTCGC TGCGCACCCT 3480 GACCCGCGGC AGCCGCGTGG CGCTGCCGGA CGCGCGCTTC GTGCGCCTGT TCCTGTGGGG 3540 GACCAACGGC CGCAGCCGCA CCGACATCGA CCTGTCGGCG GCGTTCTTCG ACCGCGAGTT 3600 CGGCTTCGTC GACACCATTT CCTACTACAA CCTGCGCGGC TACGGCGGCC ATCACAGCGG 3660 CGACATCGTC GATGCGCCCA AGGGCGCGGC CGAGTTCATC GATCTGGAGC TGCCGCTGCT 3720 GCGCGAGCGC GGCATCGGCT ATGTCGCGGT CAGCATCCAC AGCTACACCG AGCAGCCCTA 3780 TTGCGACCTG CCGGAATGTT TCGCCGGCTG GATGGCGCGC AGCGACATCG ACTCGGGCGA 3840 GCCGTTCGAG GCGCGCACCG TGCACGACCG GGTCGACCTG GCCTCGCGCC AGAACAGTTG 3900 CCTGCCGTTC GTGCTCGGCC TGGAGCGCGG CCAGGCGGTG TGGTGCGACG TCGGCATCGG 3960 CGGCAACCCG CGCTGGAACA ACGCGGCCAA CCAGCTGTCG GGCATTTCGC TGATCCTGCG 4020 CGCGATGGAG TACGACGCGT CGCCGGATCT GTACACCCTG TTCGAACTGC ATGCGCAGGC 4080 GCGCGGGCGG CTGGTGAGCG AGCGCGCCCA GGCCGCGACG GTGTTCGCTG CCGACGGCGA 4140 TGTGGATCCG TTCGATGTCG ACCGGATTCG CGCCGAGTTC CTTTGAATTC TGCGGCGGGG 4200 TTCAGGCCTC TTGCCGGAGC CGCGTCGCGA TGGAGCCCTG GATGCCCGCT TTCGCGGGCA 4260 TGACGGCAGA GAGGTTTCGC GGCGGTTGGG TTTCGCGGCA AGTCGGTTCG CCACGCCTCT 4320 CCAAGCCGTC ATCCCCGCGA AGGCGGGGAT CCAGAGACTT CAGAGCCATG CCTG 4374 // ID Contig1011 standard; DNA; UNC; 5170 BP. XX DE Contig1011.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..5170 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene complement(1431..3035) FT /locus_tag="DeVSDRAFT_0006" FT /colour=10 FT CDS complement(1431..3035) FT /locus_tag="DeVSDRAFT_0006" FT /product="2-isopropylmalate synthase" FT /note="TIGRFAM: 2-isopropylmalate synthase" FT /note="PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain" FT /note="SPTR: Q4UYG1 2-isopropylmalate synthase. Xanthomonas campestris pv. campestris (strain 8004)." FT /note="KEGG: xcb:XC_0837 2-isopropylmalate synthase " FT /note="COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthases category=E" FT /note="InterPro IPR000891:IPR002034:IPR005671:IPR013709" FT /codon_start=1 FT /transl_table=11 FT /colour=10 FT /translation=" FT MNESPGPVASISDAPQHVTIFDTSLRDGEQSPGCSMSASQKLRFAHALSELGVDVIEAGFPASSEADLEGVRAIVREVRA FT SSLATLARCHPGDIEACARALEGAAKPRIHVFISTSPLHRQHKLNLDRQQVLERAVAAVEQARRYVDDVEFSCEDALRTE FT PEYLVEICSAAIAAGARTLNIPDTVGYTTPSEIRSLFEYLRSNVRDAEKAVFSAHCHNDLGLAVANSLAAIEGGARQVEC FT TINGIGERAGNCALEELVMALRVRNAYYNASTRIDTRRLVPTSRLLSRITGMVVQRNKAVVGQNAFAHESGIHQHGMLKH FT RGTYEIMAPEDVGWAQSQMVMARHSGRAALNDRLQALGFSVDEARLNSVFAAFKTLAEKKREVFDADLEALVLGADAKAA FT RGYRLVRAHVSTGVADGSLPTASVQLVDPDGATISEAAVGDGPVHALFAALARATGLRLAIDSYNVSSVTTGDDAQGQAS FT LTARVDGVELTGSGTSTDIIEASALAWLELANRLVRTQRQTEPATQPRKVAATA* FT " FT gene complement(3032..4471) FT /locus_tag="DeVSDRAFT_0007" FT /colour=10 FT CDS complement(3032..4471) FT /locus_tag="DeVSDRAFT_0007" FT /product="Pyridoxal-5'-phosphate-dependent enzyme, beta subunit" FT /note="PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit" FT /note="SPTR: Q4UYG0 Threonine dehydratase catabolic. Xanthomonas campestris pv. campestris (strain 8004)." FT /note="KEGG: xcb:XC_0838 threonine dehydratase catabolic " FT /note="COGs: COG1171 Threonine dehydratase category=E" FT /note="InterPro IPR001926" FT /codon_start=1 FT /transl_table=11 FT /colour=10 FT /translation=" FT VHRRQRVHGQERRSDLGRAPRRAAGHHPRHHDRAVGRGLARGDLARVAGRRRSLRLRHRGRGLRDQRAGPPRVRRQPGHP FT RTGRAVRPGRARPGRPLRALADGGLSMDGDVVRTETTVGAADLLAAQARLRRYLAVTPLHHAERFGCWLKLENLQRTGSY FT KVRGALNALLAARERGDHRPVIAASAGNHAQGLAWAAYRLGVNAITVMPRCAPQTKIAGVAHWGATVRLHGETYDEAKAF FT AIELAQQHDYSLLSAFDDPDVIAGQGTVGLELAAFAPDVVLVPIGGGGLAAGVALALKSQGVRIIGAQVEGVDSMARALR FT GDRRLIEPAATLADGVRVKDPGRLTERLLSQLLDDVVIVREAELRETLVRLALEEHIIAEGAGALALAAGRRIAAKRKCA FT VVSGGNLDALVLAQLLSDVRPRAPRRPRRRNRDTSLSRAGATIEADIYKLANLPPPRAAASSPSSSPSPHRTVTEDVPA* FT " SQ Sequence 5170 BP; 677 A; 1736 C; 1925 G; 832 T; 0 other; ACTGGCCGGC GCCGACCAGG TCGCCGTTCA TGGCGATGCA CATCGAGCAG CCCGGCTCGC 60 GCCATTCGGC GCCGGCCGCG CGCACCACCG CATCGATGCC CTCGGCTTCG GCGGCGCGCT 120 TGACCTGTTC GGAGCCGGGC ACCACCAGCA TGCGCACGCG CGGATGCACG CGGCGGCCGC 180 GCAGCACCTG CGCAGCCTGG CGCAGGTCGG ACAGGCGCGA GTTGGTACAG CTGCCGACGA 240 ACACCACGTC CACCGGCCGC CCGGCCATCG CCGCGCCGCC GTCGAAGCCC ATGTAGGCCA 300 GCGCCTTGGC TTCGTCGGCG TCGTTCGCCT GCGGCAGGTG CGCGTCGATC GCCGCGACCT 360 GGCCCGGGTG CGTGCCCCAG GTCAGGGTCG GCTTGATCGC GCCGGCGTCG ATGCGCACTT 420 CGCGGTCGAA CTGCGCGCCC TCGTCGGTCT TGAACTCGCT CCAGCGCGCG ACCGCGCGCT 480 CCCAGTCGGC GCCGCGCGGC GCGCGCGGGG TCTGCGCGAG GTAGTCGAAG GTGGTCTGGT 540 CCGGCGCGAT CAGGCCGGCG CGCGCGCCGG CTTCGATCGA CATGTTGCAC ACGGTCATGC 600 GCTCGTCCAT CGACAGCGCG CGGATGGTCG AACCGCGGTA CTCGATGACG TGGCCGGTGC 660 CGCCGTTGAC GCCGATCGCG CCGATGATGT GCAGGATCAA GTCCTTGGCG CCGACGCCGG 720 GCGCCAGTTC GCCTTCGACA TTGATCGCCA GGGTCTTGGG CTTGCGCTGC AGCAGACACT 780 GGGTGGCCAG CACGTGGCCG ACCTCGCTGG TGCCGATGCC GAAGGCCAGC GCGCCGAACG 840 CGCCGTGGGT GGCGGTGTGG CTGTCGCCGC AGACGATGGT CTGGCCGGGC TGGGTCAGGC 900 CCAGTTCCGG GCCGATCACG TGGACGATGC CGCGATGGTC GCTGTCGTAA TCGAACAGCT 960 CGACGCCGTG GCGCGCGCAG TTGCGGCGCA GGGTGTCGAC CTGGTTTTCG GCTTCGGCGG 1020 TGTAGTAGGG CAGGCGGCCG TCGGCGTCGG CGGGCAGGGT CGGGGTGGAG TGGTCGAGCG 1080 TGCCCTTGGT CAGATCCGGG CGGCGCGGCG AGAGCCCGCG CGATTCCAGT TCGGCGAAGG 1140 CCTGCGGTGA GGTGACTTCG TGGATCAGGT GCAGGTCGAT GTACAGCACC GCCGGCGCGG 1200 CCTCGGATTC GGGCGCGACC AGGTGGGCGG TCCACAGTTT GTCGAACAGC GTGGTGGGTT 1260 GGGTGGCTGA AGTCATGATG GAGGCGACTA TGGCTCTAGG CGTTGAAGGT GTTTGATGCT 1320 TCCTTCTCCC GCGAGCGGGA GAAGGTGGCC CGGAGGGCCG GATGAGGGCG AGCGGCTACG 1380 TGCCCTCACC CCAACCCCTC TCCCGCGAGC GGGAGAGGGG CTTCGGTTCT TCATGCGGTC 1440 GCGGCGACCT TGCGCGGCTG CGTCGCCGGC TCCGTCTGCC GCTGCGTGCG CACCAACCGG 1500 TTCGCCAGCT CCAGCCAGGC CAGCGCGCTG GCCTCGATGA TGTCGGTGCT GGTGCCCGAA 1560 CCGGTCAGTT CGACGCCGTC CACGCGCGCG GTGAGGCTGG CCTGGCCTTG CGCGTCGTCG 1620 CCGGTGGTCA CGCTGGAGAC GTTGTAGCTG TCGATCGCCA GACGCAGGCC GGTGGCGCGC 1680 GCCAGCGCGG CGAACAGCGC GTGCACCGGG CCGTCGCCGA CCGCGGCTTC GCTGATCGTG 1740 GCGCCGTCGG GATCGACCAA CTGCACGCTC GCGGTCGGCA GGCTGCCGTC GGCCACGCCG 1800 GTGCTGACGT GGGCGCGCAC CAGCCGGTAG CCGCGCGCGG CCTTGGCGTC GGCGCCGAGC 1860 ACCAGCGCTT CCAGGTCGGC GTCGAACACT TCGCGCTTCT TCTCGGCCAG GGTCTTGAAC 1920 GCGGCGAACA CCGAGTTCAA GCGCGCCTCG TCGACGCTGA AGCCCAGCGC CTGCAAGCGG 1980 TCGTTCAGCG CGGCGCGGCC GCTGTGGCGG GCCATCACCA TCTGCGACTG GGCCCAGCCC 2040 ACGTCTTCGG GCGCCATGAT CTCGTAGGTG CCGCGGTGCT TGAGCATGCC GTGCTGGTGG 2100 ATGCCCGACT CGTGCGCGAA CGCGTTCTGC CCGACCACCG CCTTGTTGCG CTGGACCACC 2160 ATGCCGGTGA TGCGCGAGAG CAGGCGCGAG GTCGGCACCA GCCGGCGGGT GTCGATGCGG 2220 GTGCTGGCGT TGTAGTAAGC GTTGCGCACG CGCAGCGCCA TCACCAGTTC TTCCAGCGCG 2280 CAGTTGCCGG CGCGCTCGCC GATGCCGTTG ATGGTGCACT CGACCTGGCG CGCGCCGCCT 2340 TCGATCGCGG CCAGGCTGTT GGCCACGGCC AGGCCCAGGT CGTTGTGGCA GTGGGCGCTG 2400 AACACCGCTT TTTCGGCGTC GCGCACGTTG GAACGCAGGT ATTCGAACAG CGAGCGGATC 2460 TCGCTGGGCG TGGTGTAGCC GACGGTGTCG GGGATGTTCA GCGTGCGCGC GCCGGCGGCG 2520 ATCGCCGCGC TGCAGATCTC GACCAGGTAC TCGGGCTCGG TGCGCAGCGC GTCCTCGCAG 2580 GAGAACTCGA CGTCGTCGAC ATAGCGGCGC GCCTGCTCGA CCGCGGCGAC GGCGCGTTCC 2640 AGCACCTGCT GCCGGTCCAG GTTGAGCTTG TGCTGGCGGT GCAGCGGGCT GGTGGAGATG 2700 AACACATGGA TGCGCGGCTT GGCCGCGCCT TCCAGCGCGC GCGCGCAGGC TTCGATGTCG 2760 CCGGGGTGAC AGCGCGCCAG GGTCGCCAGC GACGAGGCGC GCACTTCGCG CACGATCGCG 2820 CGCACGCCCT CGAGGTCGGC CTCCGAGCTT GCGGGGAAGC CGGCCTCGAT GACGTCCACG 2880 CCGAGTTCGC TGAGCGCATG GGCGAAGCGC AGCTTCTGGC TGGCGCTCAT GCTGCAGCCG 2940 GGCGATTGCT CGCCGTCGCG CAGGCTGGTG TCGAAGATGG TGACGTGCTG GGGGGCGTCG 3000 CTAATCGACG CTACCGGACC GGGCGACTCG TTCATGCGGG GACATCCTCT GTAACGGTGC 3060 GATGCGGGGA AGGGGAAGAA GAAGGGGACG ACGCGGCCGC GCGCGGCGGC GGCAGATTGG 3120 CGAGCTTGTA AATGTCCGCC TCGATGGTGG CGCCGGCACG CGACAGCGAG GTGTCGCGAT 3180 TGCGACGGCG CGGCCGCCGC GGTGCGCGCG GTCGCACATC CGACAACAGC TGCGCCAGCA 3240 CGAGCGCGTC GAGGTTGCCG CCGGAGACCA CCGCGCACTT GCGCTTGGCG GCGATGCGGC 3300 GGCCGGCGGC CAGCGCCAGC GCGCCGGCGC CTTCGGCGAT GATGTGTTCT TCCAGCGCCA 3360 GCCGGACCAG GGTTTCGCGC AGCTCGGCTT CGCGCACGAT CACCACGTCG TCCAGCAGCT 3420 GCGACAGCAG GCGTTCGGTC AGGCGGCCGG GGTCTTTCAC CCGCACGCCG TCGGCCAGGG 3480 TCGCGGCCGG TTCGATCAGG CGGCGGTCGC CGCGCAGCGC GCGCGCCATC GAGTCCACGC 3540 CTTCGACCTG CGCGCCGATG ATGCGCACGC CCTGGGATTT CAGCGCCAAC GCCACGCCCG 3600 CGGCGAGGCC GCCGCCGCCG ATCGGCACCA GCACCACGTC GGGCGCGAAC GCGGCGAGTT 3660 CCAGGCCGAC CGTGCCTTGG CCGGCGATCA CATCGGGGTC GTCGAAGGCC GACAGCAGGC 3720 TGTAGTCGTG CTGCTGCGCC AGTTCGATGG CGAAGGCCTT GGCTTCGTCG TAGGTCTCGC 3780 CGTGCAGGCG CACGGTCGCG CCCCAGTGGG CGACGCCGGC GATCTTGGTC TGCGGCGCGC 3840 AGCGCGGCAT CACCGTGATC GCGTTCACGC CCAGACGGTA GGCGGCCCAG GCCAGGCCTT 3900 GGGCGTGGTT GCCGGCGGAG GCGGCGATCA CCGGGCGGTG GTCGCCGCGT TCGCGCGCGG 3960 CCAGCAGCGC GTTGAGCGCG CCGCGCACCT TGTAGGAACC GGTGCGTTGC AGGTTTTCCA 4020 ACTTCAGCCA GCAGCCGAAG CGCTCGGCGT GGTGCAGCGG GGTGACGGCG AGGTAGCGGC 4080 GCAGCCGCGC CTGCGCCGCC AGCAGATCGG CGGCGCCGAC GGTCGTCTCG GTGCGTACTA 4140 CGTCGCCGTC CATGCTCAGA CCGCCGTCAG CCAGTGCGCG TAGCGGCCGT CCTGGCCGCG 4200 CACGACCTGG GCGTACAGCG CGGCCAGTTC GCGGGTGACC GGGTTGTCGC CGAACTCGCG 4260 GCGGTCCAGC ACGCTGATCG CGCAGGCCTC GGCCGCGGTG CCGCAGACGA AGACTTCGTC 4320 TGCGTCCAGC AACTCGTGCA AGGTCACCTC GCGCGAGGCC GCGCCCGACA GCGCGATCAT 4380 GGTGTCGCGG GTGATGCCCG GCAGCGCGTC GCGGTGCTCG ACCGAGGTCA CTTCGCCGTT 4440 CTTGACCATG AACACGTTGG CGCCGGTGCA CTCGACCACA TAACCCTTGT CGTCGGTGAA 4500 CAGCGCCTCG TCGAAACCGC GCTGCTTGGC TTCGCGCTTG GCCAGGATCG AATTGACGTA 4560 AGCGCCCGAC AGCTTCAGCG GCGGCAGCGA GGTCGCCGGA TTGCGCTTCC ACGGCGACAC 4620 GGTCAGGCGC GTGCGCGCGC CGCCCAGGTG CACGACCTTG GCCATAGTGG CGACCATCAG 4680 GTGCTGGGTC AGCGGATCGA CGTCCAGCCC GATCGTGCCG GTGCCCATCC AGGTCAGCGG 4740 GCGGATGTAG GCGTCGCGGT GGCCGTTGGC GCGCAGCGTG TCCAGCACCG CGCGGCCGGC 4800 GCGTTCGATA TCGAACTCGA TGCCGAACAT GTCCGCGCCT TTGCGCATGC GCTCCAGGTG 4860 CTCGGGCAGG CGGAACACCG CCGCGCCGCC GTCGGCGGTG GCGTAGCTGC GGATGCCTTC 4920 GAACACTGCG GTGCCGTAGT GCATGGCGTG GGTGGTCAGC GGCGCTTCGG GGGCGTCGGC 4980 GGTGATGAAC TTGCCGTCGA ACCAGATCTG CGGCTGCGCG GCCGGCACTT CGGCGCTGCG 5040 GCTGGGCGCC GGCGCTCGTT CGCGCACGGT CGCCGCCGCA TGCGCCGGCG ACTGCGCCTG 5100 TTCGGGACGT TCCAGAACTT CGGTGTTCAT GTGCATGGGG AAACCTCGAC AGCAAGACAG 5160 TCTAGAGCTG 5170 // ID Contig101 standard; DNA; UNC; 2824 BP. XX DE Contig101.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..2824 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene 1..1812 FT /locus_tag="DeVSDRAFT_0004" FT /colour=11 FT CDS 1..1812 FT /locus_tag="DeVSDRAFT_0004" FT /product="SSS sodium solute transporter superfamily" FT /note="TIGRFAM: SSS sodium solute transporter superfamily" FT /note="PFAM: Na+/solute symporter" FT /note="SPTR: A0X808 SSS sodium solute transporter superfamily precursor. Shewanella pealeana ATCC 700345." FT /note="KEGG: pha:PSHAb0160 conserved protein of unknown function ; putative integral inner membrane sodium-dependent carbohydrate transporter protein " FT /note="COGs: COG0591 Na+/proline symporter category=R" FT /note="InterPro IPR001734" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT EAGRVPGQIAGAGRATGQAHLLIPVSASAHAPAQLKTFQTITGAWAELPGAQVPADALATAAWPDGLMWARADGAQTRFA FT TAQIQSNKLRLHWLDWAVIVVYLAGMIGIGLYFYLREKRGSTDSFFVGGRSIPFWAAGISLYAANTSSISFIAIPAKAFE FT TNWQYMANNIIAVGGLVFVAIWIVPLLRRLDLMSVFSYLETRFHPSIRMLASALCVFVQIGSRMSVILFLPALAIATITG FT ISVFWSVLLMGGFTIVYTAMGGMKAVIWTDFVQVIVKMGGAIFAIGFMIWGLRGGLHQFWSTAMAEGKMHTFDFSFDLTK FT ATVWGFLFLVLFEVVLTFPKDQVLMQRTLSTSSAREAGRSIWAFAAIMIPGGIVFYTIGTAMFVYYREHPERMNPLLPID FT ATFPMFIAAELPVGVTGLIIAGIFAAAMATLSGIMNSVATLISVDFYEKLHKGHSAQQSVRFAELMTVVVGLVGIGAALL FT LSKFDIHSLFDVSIELAGLLGGGFAGAYTLGMFTRRANWQGVAIGIGASVVLTLGIWTLRAVHPYYYLAISIALCIVIGY FT IASLFFPAPTQSLDGLTIYRDKPSSAPAGHLLPQAGEGTAKAD* FT " FT gene 1946..2824 FT /locus_tag="DeVSDRAFT_0005" FT /colour=6 FT CDS 1946..2824 FT /locus_tag="DeVSDRAFT_0005" FT /product="transcriptional regulator, LysR family" FT /note="PFAM: regulatory protein, LysR; LysR, substrate-binding" FT /note="SPTR: Q1M944 Putative LysR family transcriptional regulator. Rhizobium leguminosarum bv. viciae (strain 3841)." FT /note="KEGG: rle:pRL90211 putative LysR family transcriptional regulator " FT /note="COGs: COG0583 Transcriptional regulator category=K" FT /note="InterPro IPR000847:IPR005119" FT /codon_start=1 FT /transl_table=11 FT /colour=6 FT /translation=" FT VETQFLNTFVTIVDQGSMAAAARVLGITPAAVAQQIRTLEREIGAPLIARVGRTVSVTEEGARILPRTRELLRNIADLRS FT VATESEIAGELRLGACPTALAGILPDVLARMVETFPQINVFIKPGYSADLYHAVEQGDLDAAIVLQAPFPLPKTCEWQLL FT REEPLIVLAPAHLADRDPHELLATQPLIRYDRHQWGGRQAEEYLRAQRIVPRERFELNALNAIAVMVDRGLGVSLVPDWA FT QPWPEGLKLARIPLPDASAKRCIGIVWSRSSVRVRLVTVLLQKSRKAMQQRSA FT " FT misc_feature order(277..345,388..456,493..561,679..747,808..876, FT 961..1014,1081..1149,1207..1275,1378..1446,1474..1542, FT 1561..1620,1633..1701) FT /colour=11 FT /locus_tag="DeVSDRAFT_0004" FT /note="12 probable transmembrane helices predicted by FT TMHMM2.0" SQ Sequence 2824 BP; 442 A; 989 C; 905 G; 488 T; 0 other; GAGGCCGGCC GCGTGCCCGG CCAGATCGCC GGCGCCGGCC GCGCCACCGG CCAGGCCCAC 60 CTGCTGATCC CGGTGAGCGC CAGCGCGCAT GCGCCGGCGC AGCTCAAGAC CTTCCAGACC 120 ATCACCGGCG CCTGGGCCGA ACTGCCCGGC GCGCAGGTGC CGGCCGACGC GCTCGCCACC 180 GCGGCCTGGC CCGACGGCCT GATGTGGGCG CGCGCCGACG GCGCCCAGAC CCGCTTCGCC 240 ACCGCTCAGA TCCAGTCCAA CAAGCTGCGC CTGCACTGGC TCGACTGGGC GGTCATCGTC 300 GTCTACCTCG CCGGCATGAT CGGCATCGGC CTGTATTTCT ATCTGCGCGA AAAGCGCGGC 360 AGCACCGACA GCTTCTTCGT CGGCGGCCGC AGCATTCCGT TCTGGGCCGC CGGCATCAGC 420 CTGTACGCGG CCAACACCAG TTCGATCAGC TTCATCGCGA TTCCGGCCAA GGCCTTCGAA 480 ACCAACTGGC AGTACATGGC CAACAACATC ATCGCCGTCG GCGGGCTGGT GTTCGTGGCG 540 ATCTGGATCG TGCCGCTGCT GCGCCGGCTC GACCTGATGT CGGTGTTCTC GTACCTGGAA 600 ACCCGCTTCC ATCCGTCCAT CCGCATGCTC GCCAGCGCGT TGTGCGTGTT CGTGCAGATC 660 GGCAGCCGCA TGAGCGTGAT CCTGTTCCTG CCGGCGCTGG CGATCGCCAC CATCACCGGC 720 ATCAGCGTGT TCTGGAGCGT GCTGCTGATG GGCGGCTTCA CCATCGTCTA CACCGCGATG 780 GGCGGGATGA AGGCGGTGAT CTGGACCGAC TTCGTCCAGG TCATCGTCAA GATGGGCGGC 840 GCGATCTTCG CCATCGGCTT CATGATCTGG GGCCTGCGCG GCGGCCTCCA TCAGTTCTGG 900 TCGACCGCGA TGGCCGAAGG CAAGATGCAC ACCTTCGATT TCAGCTTCGA CCTGACCAAG 960 GCCACCGTGT GGGGCTTCTT GTTCCTGGTG CTGTTCGAGG TGGTGCTGAC CTTCCCCAAG 1020 GATCAGGTGC TGATGCAGCG CACCTTGTCG ACCAGCTCGG CCAGGGAAGC CGGCCGCTCG 1080 ATCTGGGCGT TCGCGGCGAT CATGATTCCC GGCGGCATCG TGTTCTACAC CATCGGCACG 1140 GCGATGTTCG TGTACTACCG CGAGCATCCC GAGCGCATGA ACCCGCTGCT ACCGATCGAT 1200 GCGACCTTCC CGATGTTCAT CGCCGCCGAA CTGCCGGTGG GCGTGACCGG GCTCATCATC 1260 GCCGGCATCT TCGCCGCGGC GATGGCGACG CTGTCGGGGA TCATGAATTC GGTGGCGACG 1320 CTGATCTCGG TGGACTTCTA CGAGAAGCTG CACAAGGGCC ACAGCGCGCA GCAGAGCGTG 1380 CGCTTCGCCG AACTCATGAC CGTGGTGGTC GGCCTGGTCG GCATCGGCGC GGCGCTGCTG 1440 CTGTCGAAGT TCGACATCCA TTCGCTGTTC GACGTGTCGA TCGAACTGGC CGGCCTGCTC 1500 GGCGGCGGTT TCGCCGGCGC CTACACCCTG GGCATGTTCA CGCGTCGCGC CAACTGGCAG 1560 GGCGTGGCGA TCGGGATCGG CGCGAGCGTG GTGCTGACCT TGGGCATCTG GACGCTGCGC 1620 GCGGTGCATC CGTACTACTA CCTGGCGATC TCGATCGCGC TGTGCATCGT GATCGGTTAC 1680 ATCGCCAGCC TGTTCTTTCC GGCGCCGACG CAGTCGCTGG ATGGGTTGAC GATTTATCGC 1740 GACAAGCCCT CATCCGCCCC TGCGGGGCAC CTTCTCCCGC AAGCGGGAGA AGGAACGGCA 1800 AAAGCCGACT AGCTTTTGAG AGCCCCTCTC CCGTTCACGG GAGAGGGGTT GGGGTGAGGG 1860 CCGCCCCCCA CGCAAAGATG ACTAATGGAA GTAGCCCACC CCACCCACCT GAGGTAGCGT 1920 TGCCCGACAA CGAACGCGAG CCGCCGTGGA AACCCAGTTC CTCAACACCT TCGTCACCAT 1980 CGTCGACCAA GGCTCGATGG CCGCCGCCGC GCGCGTGCTC GGCATCACCC CGGCCGCGGT 2040 GGCGCAGCAG ATCCGCACGC TGGAACGCGA GATCGGCGCA CCGCTGATCG CGCGCGTCGG 2100 CCGCACCGTC AGCGTCACCG AGGAAGGCGC GCGGATCCTG CCGCGCACGC GCGAGCTGCT 2160 GCGCAACATC GCCGACCTGC GCAGCGTCGC CACCGAAAGC GAAATCGCCG GCGAACTGCG 2220 CCTGGGCGCC TGTCCGACCG CGCTGGCCGG GATCCTGCCC GACGTGCTCG CGCGCATGGT 2280 CGAAACCTTT CCGCAGATCA ACGTCTTCAT CAAACCGGGC TATTCGGCCG ATCTCTACCA 2340 CGCGGTCGAA CAGGGCGACC TGGATGCGGC GATCGTGCTG CAGGCGCCAT TCCCGCTGCC 2400 CAAGACCTGC GAGTGGCAGT TGCTGCGCGA GGAGCCGCTG ATCGTGCTGG CGCCGGCGCA 2460 CCTAGCCGAC CGCGACCCGC ACGAACTGCT CGCCACCCAG CCGCTGATCC GCTACGACCG 2520 CCACCAATGG GGCGGCCGCC AGGCCGAGGA ATACCTGCGC GCGCAGCGCA TCGTCCCGCG 2580 CGAACGCTTC GAGTTGAATG CGCTCAACGC CATCGCGGTG ATGGTCGACC GCGGCCTGGG 2640 CGTGTCGCTG GTGCCCGACT GGGCGCAGCC GTGGCCCGAA GGCCTGAAAC TCGCGCGCAT 2700 CCCGCTGCCC GACGCCTCGG CCAAGCGCTG CATCGGCATC GTCTGGTCGC GCTCGAGCGT 2760 GCGCGTGCGC CTGGTCACCG TGCTGTTGCA GAAAAGCCGC AAGGCCATGC AGCAGCGCAG 2820 CGCG 2824 // ID Contig1035 standard; DNA; UNC; 2507 BP. XX DE Contig1035.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..2507 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene 3..2507 FT /locus_tag="DeVSDRAFT_0008" FT /colour=3 FT CDS 3..2507 FT /locus_tag="DeVSDRAFT_0008" FT /product="protein of unknown function DUF1111" FT /note="PFAM: protein of unknown function DUF1111" FT /note="SPTR: Q2SHK5 Predicted thiol oxidoreductase. Hahella chejuensis (strain KCTC 2396)." FT /note="KEGG: hch:HCH_03103 predicted thiol oxidoreductase " FT /note="COGs: COG3488 thiol oxidoreductase category=C" FT /note="InterPro IPR010538" FT /codon_start=1 FT /transl_table=11 FT /colour=3 FT /translation=" FT RAARPVVPARSRRTDAVQSNRFRAITDAAHGMLRLRRPRSRRNGKPAHKTAVTVERKTARRRLHFVDRASPNAVYAEELR FT RRFDRGDLAPPQPLLGSNGTRREPIDAAARFLSRSPRSLRMRHAIAIATLALMLSACAGNDTPLTEPANGADATNIAPRT FT AVSARNAGRGALPAYSELFPQGTELVEQLSYTEADGTLVTLMGMRPTERHARERGEDWFAPDNGPGRYLTFPTFYFQNRT FT FGLEIRDGVPAGRQRIEVYLRVNDGTFDGTTFSLFRNINNPNVRDYGWSLNYGFNNPKENNLPICHAGQPREDCMMVFQS FT NWRTSPHSPLKIGDKIELAPAPRLKRPTVDGGGDRYYSFEQLYIVGVGLRPWYGVAPNLDSHPLPDATLLGGLTSVSYNY FT SDEPMRMFQQMANNIGIANAKRFVEGRRLFHTSFVDGRHSEHPTVNPVFAAHIGQRGPRYNQSSCIACHTANGRSAATAV FT GARLDTLSILAAAGESGAIALPDATYGFNIQQNAQDAAAPDYGVSVASYEVATRTLHDGETIELRKPVYAFKGPVPARYS FT ARQAPQVIGLGLLEAVAESTVLALSDPEDANGDGIKGIPNWIEDPETGRTLLGRFGWKASKASLRQQVGDALVKDIGVTS FT PVFPQRSCQRGGADCRIATAPVSVAETELQRIAEYLALIGVPAQRSVRSDYPTGMRVPLEHQIDPDRIGAGAALFERSGC FT SACHTPTLKTGSTHPFAELRDQTIHPYTDLLLHDMGPGLADNLAEGRAAPEQWRTPPLWGLGSLRFVQGGAQNVRYLHDG FT RARSLIEAIGWHGGEGEASRRRFEALSADERERCP FT " SQ Sequence 2507 BP; 438 A; 898 C; 815 G; 356 T; 0 other; ATCGCGCCGC ACGGCCCGTC GTACCGGCCC GTTCGCGACG AACGGATGCC GTCCAGTCGA 60 ACCGGTTCCG CGCGATAACG GACGCAGCTC ACGGCATGCT TCGGCTGCGC CGTCCGCGCA 120 GTCGCCGCAA TGGGAAGCCA GCGCACAAAA CCGCAGTGAC CGTTGAGCGA AAAACAGCTC 180 GCAGGCGATT GCATTTCGTC GATCGCGCGA GCCCAAACGC GGTATACGCC GAAGAATTGC 240 GACGCAGGTT CGACCGGGGC GACTTGGCGC CGCCGCAGCC GCTGCTAGGC TCGAACGGCA 300 CGCGCCGCGA GCCCATCGAC GCCGCAGCGC GCTTCCTCAG CCGCTCGCCA AGGAGTCTGC 360 GCATGCGTCA CGCGATAGCG ATCGCCACGC TCGCCCTAAT GCTGTCGGCC TGCGCGGGCA 420 ACGACACGCC GTTGACCGAA CCTGCGAACG GCGCCGATGC GACGAATATC GCGCCGCGAA 480 CCGCCGTGTC GGCGCGCAAC GCCGGCCGGG GCGCGTTGCC GGCGTACTCG GAGCTGTTCC 540 CGCAAGGCAC CGAGCTCGTC GAGCAACTGA GCTACACCGA GGCCGACGGC ACCCTGGTCA 600 CGCTGATGGG GATGCGCCCC ACCGAACGGC ATGCGCGCGA GCGCGGCGAG GACTGGTTCG 660 CGCCCGACAA CGGGCCCGGC CGCTACCTGA CCTTCCCGAC CTTCTATTTC CAGAACCGCA 720 CCTTCGGCCT GGAAATCCGC GACGGCGTGC CCGCCGGCCG CCAACGCATC GAAGTCTACC 780 TGCGCGTCAA CGACGGGACG TTCGACGGCA CCACCTTCAG CCTGTTCCGC AACATCAACA 840 ATCCGAACGT GCGCGACTAT GGCTGGTCGC TCAACTACGG CTTCAACAAT CCCAAGGAAA 900 ACAACCTGCC GATCTGCCAC GCCGGGCAGC CGCGCGAGGA CTGCATGATG GTGTTCCAGT 960 CGAACTGGCG CACCAGCCCG CACAGCCCGC TGAAGATCGG CGACAAGATC GAACTGGCGC 1020 CGGCGCCGCG CCTGAAGCGT CCGACCGTCG ACGGCGGCGG TGACCGCTAT TACTCGTTCG 1080 AGCAGTTGTA CATCGTCGGC GTCGGGCTGC GTCCGTGGTA CGGCGTCGCG CCGAACCTCG 1140 ACTCGCACCC ATTGCCCGAT GCGACCCTGC TCGGCGGCCT GACCAGCGTG TCGTACAACT 1200 ACTCCGACGA GCCGATGCGG ATGTTCCAGC AGATGGCCAA CAACATCGGC ATCGCCAACG 1260 CCAAGCGCTT CGTCGAAGGA CGGCGGCTGT TCCACACCTC GTTCGTCGAC GGCCGGCATT 1320 CCGAGCACCC CACGGTGAAC CCGGTGTTCG CCGCGCACAT CGGCCAGCGC GGTCCGCGCT 1380 ACAACCAGAG TAGTTGCATC GCCTGCCACA CGGCCAACGG CCGCAGCGCG GCCACGGCGG 1440 TCGGCGCCCG GCTCGACACG CTGTCCATCC TCGCCGCGGC CGGCGAATCC GGCGCGATCG 1500 CGTTGCCGGA CGCGACTTAC GGCTTCAACA TTCAGCAGAA CGCACAGGAT GCGGCGGCGC 1560 CCGATTACGG CGTCAGCGTC GCCTCCTACG AGGTGGCCAC GCGCACCCTG CACGACGGCG 1620 AGACCATCGA ACTGCGCAAG CCGGTGTACG CGTTCAAGGG GCCCGTGCCG GCGCGCTATT 1680 CCGCGCGCCA GGCGCCGCAG GTCATCGGTC TGGGCCTGCT GGAAGCGGTG GCCGAATCGA 1740 CCGTGCTGGC CTTGTCCGAC CCGGAGGATG CCAACGGCGA CGGGATCAAG GGCATTCCCA 1800 ACTGGATCGA AGATCCGGAA ACCGGCCGCA CCTTGCTGGG GCGGTTCGGC TGGAAAGCGT 1860 CGAAGGCCAG CTTGCGCCAG CAGGTCGGCG ACGCCCTGGT CAAGGACATC GGCGTAACCT 1920 CGCCAGTGTT CCCTCAGCGC AGTTGCCAAC GCGGCGGCGC GGACTGCCGC ATTGCGACCG 1980 CGCCGGTGTC GGTCGCCGAG ACCGAGCTGC AGCGCATCGC CGAGTATCTG GCGCTGATCG 2040 GCGTACCGGC GCAGCGCAGC GTGCGCAGCG ACTATCCGAC GGGCATGCGC GTCCCGCTGG 2100 AGCACCAGAT CGATCCGGAC CGGATCGGCG CCGGCGCCGC GCTGTTCGAG CGTTCCGGCT 2160 GCTCGGCCTG CCACACGCCG ACCCTGAAGA CCGGCAGCAC GCACCCGTTC GCGGAACTGC 2220 GCGACCAGAC CATCCATCCC TACACCGATC TATTGCTGCA CGACATGGGG CCGGGACTGG 2280 CCGACAACCT GGCCGAAGGC CGCGCCGCTC CGGAGCAGTG GCGCACGCCG CCGTTGTGGG 2340 GGCTGGGTTC GCTGCGCTTC GTGCAGGGCG GTGCACAGAA CGTGCGCTAC CTGCATGACG 2400 GGCGTGCGCG CAGCCTGATC GAAGCGATCG GCTGGCACGG CGGCGAAGGC GAGGCCAGTC 2460 GCCGCCGCTT CGAAGCGCTG AGCGCGGACG AACGCGAGCG GTGTCCT 2507 // ID Contig1036 standard; DNA; UNC; 2587 BP. XX DE Contig1036.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..2587 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene 544..882 FT /locus_tag="DeVSDRAFT_0010" FT /colour=13 FT CDS 544..882 FT /locus_tag="DeVSDRAFT_0010" FT /product="conserved hypothetical protein" FT /note="SPTR: Q357U1 Hypothetical protein. Bradyrhizobium sp. BTAi1." FT /note="KEGG: psp:PSPPH_3474 hypothetical protein " FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT VLKTLDGRYIVVKGRLWRATSPHLSAAQKSEAVNELMAARRAVAAAAGRADALREARRRVDRAKRSLGERGPVWWTDGAP FT DYNRCTIQRSPYAAWYAAMFAGDGQAEGDPSG* FT " FT gene complement(987..1151) FT /locus_tag="DeVSDRAFT_0011" FT /colour=13 FT CDS complement(987..1151) FT /locus_tag="DeVSDRAFT_0011" FT /product="protein of unknown function DUF1328" FT /note="PFAM: protein of unknown function DUF1328" FT /note="SPTR: A1FUB9 Hypothetical protein precursor. Stenotrophomonas maltophilia R551-3." FT /note="KEGG: xac:XAC0239 hypothetical protein " FT /note="InterPro IPR009760" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation="MLHYAVVFLVIALIAGVLGFSGIAGAASQIAWILFVVFLILAVISFFRGRGRVR*" FT gene complement(1234..1611) FT /locus_tag="DeVSDRAFT_0012" FT /colour=13 FT CDS complement(1234..1611) FT /locus_tag="DeVSDRAFT_0012" FT /product="hypothetical protein" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MGMQAFETTHEIALVVDADAELAHWRSGFRELPHCRSLRWDEVKPALKLGIDACLKANGRDLTEMVDELEARYRRTGNES FT RLEWSQARELVAMVWVRIWEQRRNRTIASLAPIPVGSMTLGLRAR* FT " FT gene complement(1892..2509) FT /locus_tag="DeVSDRAFT_0013" FT /colour=13 FT CDS complement(1892..2509) FT /locus_tag="DeVSDRAFT_0013" FT /product="conserved hypothetical protein" FT /note="SPTR: A1H427 Hypothetical protein. Parvibaculum lavamentivorans DS-1." FT /note="KEGG: shw:Sputw3181_3583 hypothetical protein " FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MASKRHDRAQLDELLYQALETESGGIEIYQTALECAVNDDLREEWQGYLDETRRHHQILTTVLTEMGLDPQASSPGREVV FT AHIGASLVKAMRMAQQAGDPQAAELVAAECVVLAETKDHQNWELIGHVAKNTSGKQAQMLMDAYEQVEKEEDHHLYHTKG FT WGRELWIASLGFKAVLPPPEEIKHVETAIGASRAEQARETMLKKN* FT " FT gene 45..533 FT /locus_tag="DeVSDRAFT_0009" FT /colour=11 FT CDS 45..533 FT /locus_tag="DeVSDRAFT_0009" FT /product="general stress protein" FT /note="SPTR: Q5GZC8 General stress protein. Xanthomonas oryzae pv. oryzae." FT /note="KEGG: xoo:XOO2689 general stress protein " FT /note="COGs: COG3871 Uncharacterized stress protein (general stress protein 26) category=R" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT MADHEALTRKLWKHLHDDRTLMLGLEEEGGHLRPMTALAEGDRSPLWFFTSRDNELVSRLVAGARPASASFAAKDHALFA FT SIRGRLSLDTDRTVVARLWNPFIAAWYQGGQDDPKLALLRFDADKAEVWLNENSLLAGVKLLLGMDPKKEYADKVGEVDL FT KG* FT " FT misc_feature complement(order(1011..1061,1074..1130)) FT /colour=11 FT /locus_tag="DeVSDRAFT_0011" FT /note="2 probable transmembrane helices predicted by FT TMHMM2.0" FT sig_peptide complement(1071..1151) FT /colour=11 FT /locus_tag="DeVSDRAFT_0011" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 1.000) with cleavage site probability 0.978 at FT residue 27" SQ Sequence 2587 BP; 471 A; 807 C; 827 G; 481 T; 1 other; CGCCGGGGCG CGGTAGATCC CGCAATTCAT CCAAGAGGAA CGCCATGGCT GATCACGAAG 60 CGCTAACGCG AAAACTGTGG AAACACCTGC ACGACGACCG CACCTTGATG CTCGGCCTCG 120 AAGAGGAGGG CGGGCACCTA CGGCCGATGA CGGCGCTGGC CGAAGGCGAC CGGTCGCCGT 180 TGTGGTTCTT CACCTCGCGC GACAACGAAC TGGTGAGCCG TCTTGTCGCG GGAGCGCGGC 240 CGGCGAGCGC TTCGTTCGCG GCTAAGGACC ATGCCTTGTT CGCAAGCATC CGCGGACGTT 300 TGAGCCTCGA TACCGACCGC ACAGTCGTCG CGCGCCTGTG GAATCCGTTC ATCGCCGCTT 360 GGTATCAGGG AGGCCAGGAC GATCCCAAGC TGGCTCTGCT GCGTTTCGAT GCCGATAAAG 420 CCGAAGTCTG GTTGAACGAG AACAGCCTGC TCGCCGGAGT CAAGCTGCTG CTTGGCATGG 480 ATCCGAAGAA GGAATATGCC GACAAGGTCG GCGAAGTCGA CCTAAAGGGC TGAGGTTCGA 540 CGCGTGCTGA AGACCCTGGA CGGACGCTAC ATCGTGGTGA AAGGCCGGCT GTGGAGAGCG 600 ACATCTCCGC ATCTGTCAGC AGCGCAGAAG TCGGAGGCGG TGAACGAGTT GATGGCGGCG 660 CGGCGCGCGG TCGCCGCGGC GGCTGGACGG GCCGATGCGT TGCGCGAAGC GCGCCGGCGC 720 GTCGACCGTG CCAAACGTTC GCTGGGCGAG CGTGGCCCGG TCTGGTGGAC CGACGGTGCG 780 CCCGACTACA ACCGTTGCAC GATTCAACGC AGCCCTTACG CAGCTTGGTA CGCGGCAATG 840 TTCGCCGGCG ACGGCCAGGC CGAGGGCGAT CCGTCCGGCT AGGCCCAGAG AGCGCGAAAC 900 CAGGCTGGCA GCGATGCTGG CGAGGGCGGG TCGCATGCGC TGCGACGCCG GTTGTCGGCG 960 CCGCAGCGAG GCAGTCCTGC TTTCGCTTAG CGGACCCGCC CGCGCCCGCG GAAGAACGAA 1020 ATCACCGCCA GGATCAGGAA CACCACGAAC AAGATCCAGG CGATCTGGCT GGCGGCTCCT 1080 GCGATTCCGC TAAAACCGAG CACGCCGGCG ATAAGCGCGA TTACCAGAAA TACCACGGCG 1140 TAATGCAGCA TGAGAGTCTC CAGAACAGTT TAGGTGGATT CGACGAGCAC CGGCGGAATC 1200 GAAGCTCAGG CCCGATCCCG CGCAGGCGCG AGTTCAACGG GCGCGCAGGC CCAGGGTCAT 1260 GCTTCCTACG GGAATAGGCG CTAGCGACGC GATGGTCCGA TTCCGGCGTT GCTCCCAGAT 1320 TCGCACCCAG ACCATGGCGA CGAGTTCGCG CGCTTGGCTC CATTCCAGGC GCGATTCGTT 1380 GCCGGTGCGC CGGTAACGGG CTTCCAGTTC GTCGACCATT TCGGTCAGAT CGCGGCCATT 1440 GGCTTTGAGG CAGGCGTCGA TACCCAGCTT CAGCGCCGGC TTGACTTCGT CCCAACGCAG 1500 CGACCGGCAA TGCGGCAATT CGCGAAAGCC GGACCGCCAA TGCGCCAACT CGGCATCGGC 1560 GTCCACCACC AATGCAATCT CGTGCGTCGT CTCGAAAGCT TGCATACCCA TCGTGAGCGT 1620 TCCTTGGCGT TGAAGAGGAT GTCCCCCAGG TGGGCGACCG TAAGCAGCGC TCAGTCGCCG 1680 CAACGTGAAT AAAACGGCAT TCGCGGACGA CAGTTTTCTA TTCGTCGACG CGGCTTAACC 1740 GTTAAGCGAC AAAGTAGGAA ATCGCTCACG CTAACGACGC ATCGAGGCTG TCATCCGTGC 1800 GTTTGCAGCG GCGAAAACGC GAACCGCCCG GAAGCGATGC TTCCGGGCGG CATTAGTGAA 1860 CGAAGCTATG CGAGGCCGGA GCGGCCGTCG CTCAGTTCTT CTTCAACATT GTCTCGCGCG 1920 CCTGCTCGGC GCGCGACGCG CCGATCGCGG TTTCGACGTG CTTGATCTCT TCCGGCGGCG 1980 GCAGCACCGC CTTGAAGCCG AGACTGGCGA TCCACAGCTC CCGGCCCCAA CCCTTAGTGT 2040 GATAAAGGTG GTGGTCCTCT TCCTTTTCCA CCTGCTCGTA AGCGTCCATC AGCATCTGCG 2100 CCTGCTTGCC GCTGGTGTTC TTGGCGACGT GCCCGATCAG CTCCCAGTTC TGGTGGTCCT 2160 TGGTTTCGGC CAGCACGACG CACTCGGCCG CGACCAACTC GGCGGCCTGG GGATCGCCGG 2220 CTTGCTGAGC CATGCGCATG GCTTTCACCA GGGAGGCGCC GATATGCGCG ACCACCTCGC 2280 GTCCGGGCGA ACTCGCCTGC GGGTCCAGGC CCATCTCGGT CAGGACCGTC GTCAGTATCT 2340 GGTGATGGCG GCGGGTCTCG TCGAGATAGC CTTGCCATTC CTCGCGCAGA TCGTCGTTGA 2400 CCGCGCACTC GAGCGCCGTC TGGTAGATCT CGATCCCGCC GCTTTCGGTT TCCAGCGCCT 2460 GGTAGAGCAG TTCGTCCAAT TGGGCTCGAT CGTGTCGTTT GCTGGCCATC GTTGTTTCTC 2520 CGGNGCGATT GCTGGCTTAG GTACGTTGCT TGCGTAAACG CACCTAGTCC CGATGGAATT 2580 CAGTACT 2587 // ID Contig1047 standard; DNA; UNC; 4292 BP. XX DE Contig1047.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..4292 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene 3..1367 FT /locus_tag="DeVSDRAFT_0014" FT /colour=10 FT CDS 3..1367 FT /locus_tag="DeVSDRAFT_0014" FT /product="Bacillolysin" FT /EC_number="3.4.24.28" FT /note="PRIAM: Bacillolysin" FT /note="PFAM: peptidase M4, thermolysin; Peptidase M4, thermolysin" FT /note="SPTR: Q62AY4 Thermolysin metallopeptidase (EC 3.4.24.-). Burkholderia mallei (Pseudomonas mallei)." FT /note="KEGG: bpm:BURPS1710b_A0599 thermolysin metallopeptidase " FT /note="COGs: COG3227 Zinc metalloprotease (elastase) category=E" FT /note="InterPro IPR001570:IPR006025:IPR013856" FT /codon_start=1 FT /transl_table=11 FT /colour=10 FT /translation=" FT QRGQLRSALLTLRSTQRPSLTPRLSADAAAVEAGARFAGRVDKVYSNELVVYARGKQPLLAYEVTLQGADTRAHSGLVKY FT YVDAASGKVLDAQDLIQTAAATGAGKSFYYGDLSISTDQKSATKFDLIDTTRGSGSVYDAKGGVVSGLFDIFSTTSNATL FT FTDTDNTWGNNAVSDRATLAVDIHYGVGVTWDYYKNVHGRSGLAGDGKGVKSYAHTNFKTSTGATTGANAAYVDLVKSMF FT YGDGDASRNVGPVVGLDVAGHEMTHGVTAATSKLAYSGDAGGLNEASSDIFGTLVEFYANNARDPGDYRIGEVMRANGAA FT FRDMYNQAVDGKSFNCYPAGGFDPSQGAGGAHDPHYTSGVGNRLAYLAIEGATVPAGSGLTQAQLVCNGDTGIAGMGRDK FT FGKIWYRALTAKFTSNTTYPQARAATLAAATELYGANSAEYNTLARAWSAVNVN* FT " FT gene 2400..3155 FT /locus_tag="DeVSDRAFT_0015" FT /colour=9 FT CDS 2400..3155 FT /locus_tag="DeVSDRAFT_0015" FT /product="4'-phosphopantetheinyl transferase" FT /note="PFAM: 4'-phosphopantetheinyl transferase" FT /note="SPTR: Q75PZ2 Putative 4'-phosphopantetheinyl transferase. Serratia marcescens." FT /note="KEGG: plu:plu0992 4'-phosphopantetheinyl tranferase " FT /note="COGs: COG2977 Phosphopantetheinyl transferase component of siderophore synthetase category=Q" FT /note="InterPro IPR003542:IPR008278" FT /codon_start=1 FT /transl_table=11 FT /colour=9 FT /translation=" FT MTVDAPAAVYPDPPGGEPEFLREAGDIDIEAFGRRFAGHACRFDLSSYRDELFARHAIAFAPQLERAVPKRRSEFLAGRV FT CASRALARLGSAPATIPIGRDREPVWPDGVAASISHAGDRALCLAVPAADTLGLGVDIERPLDAQRAAEIRGIVVDADEQ FT ALIQAGFDDPAAGLAAVFSAKESLYKALFPQVRRLFGFEAMRLTQTGAQRLEFVCAEDLAAQVRRGQRYSAHYRFDADGG FT VLSLVWLPRPA* FT " FT gene 3216..4292 FT /locus_tag="DeVSDRAFT_0016" FT /colour=12 FT CDS 3216..4292 FT /locus_tag="DeVSDRAFT_0016" FT /product="glutamine amidotransferase of anthranilate synthase" FT /note="TIGRFAM: glutamine amidotransferase of anthranilate synthase" FT /note="PFAM: glutamine amidotransferase class-I" FT /note="SPTR: Q47PB8 Para-aminobenzoate synthase, component I:Glutamine amidotransferase of anthranilate synthase. Thermobifida fusca (strain YX)." FT /note="KEGG: tfu:Tfu_1666 para-aminobenzoate synthase, component I:glutamine amidotransferase of anthranilate synthase " FT /note="COGs: COG0512 Anthranilate/para-aminobenzoate synthases component II category=H" FT /note="InterPro IPR000991:IPR001317:IPR006220:IPR006221:IPR011702:IPR012998" FT /codon_start=1 FT /transl_table=11 FT /colour=12 FT /translation=" FT MRCLLIDNYDSFTWNLADLIGRAFGQAPQVLRNDAADWDALQADARYDCIVVSPGPGSAVRAADLGLSRRAIADSRLPLL FT GVCLGFQAIAHAHGGRIAHAPEPVHGRPARLQHDGRELFAGLPQGLRVIRYHSLIAAAPLPPELEASAHSEDGVIMALRH FT RHRPQWGVQFHPESVLSEHGLAMIGNFRDLVRRHRGAATVGWSEAAEPALANPPAPTQSSTPTLRVWLRPLDPAPDAETV FT FAQCYAHAPHAFWLDSQVADEAGCSFMGAAEPDDVLSYRVGDDDAALSAGQALLAWMREELAHAVAAVDAPLPFDSARLR FT RYFGTVPAHLRLFF--FFFFFFFFFFFFFFFFFFFFFFF FT " FT misc_feature 4212..4280 FT /colour=11 FT /locus_tag="DeVSDRAFT_0016" FT /note="1 probable transmembrane helix predicted by FT TMHMM2.0" SQ Sequence 4292 BP; 666 A; 1525 C; 1382 G; 715 T; 4 other; GCCAACGCGG CCAGCTGCGT TCGGCGCTGC TGACCTTGCG CAGCACGCAA CGCCCGTCGC 60 TGACGCCGCG CCTGAGCGCG GACGCCGCCG CGGTCGAGGC CGGCGCGCGC TTCGCCGGCC 120 GCGTCGACAA GGTGTATTCC AACGAACTGG TGGTTTACGC GCGCGGCAAG CAGCCGCTGC 180 TCGCGTACGA AGTCACCCTG CAGGGCGCCG ACACCCGCGC GCATTCGGGC CTGGTGAAGT 240 ACTACGTCGA CGCGGCCAGC GGCAAGGTGC TCGACGCCCA GGACCTGATC CAGACCGCCG 300 CCGCGACCGG CGCCGGCAAG TCGTTCTACT ACGGCGACCT GAGCATCTCC ACCGACCAGA 360 AGAGCGCGAC CAAGTTCGAC CTGATCGACA CCACCCGCGG CAGCGGCAGC GTGTACGACG 420 CCAAGGGCGG GGTGGTGTCG GGCCTGTTCG ACATCTTCTC CACCACCTCC AACGCGACCC 480 TGTTCACCGA TACCGACAAT ACCTGGGGCA ACAACGCCGT CAGCGACCGC GCCACGCTCG 540 CCGTCGACAT CCACTACGGC GTCGGCGTGA CCTGGGACTA CTACAAGAAC GTGCACGGCC 600 GCAGCGGCCT GGCCGGCGAC GGCAAGGGCG TGAAGAGCTA CGCGCACACC AACTTCAAGA 660 CCTCCACCGG CGCCACCACC GGCGCCAACG CCGCCTACGT CGATCTGGTC AAGTCGATGT 720 TCTACGGCGA CGGCGACGCC TCGCGCAACG TCGGCCCGGT GGTCGGGCTG GATGTGGCCG 780 GCCACGAAAT GACCCACGGC GTCACCGCGG CGACGTCCAA GCTCGCCTAC TCCGGCGATG 840 CCGGCGGCCT CAACGAAGCG TCCTCGGACA TCTTCGGCAC GCTGGTGGAG TTCTATGCCA 900 ACAATGCGCG CGATCCGGGC GACTACCGCA TCGGCGAGGT GATGCGCGCC AACGGCGCGG 960 CGTTCCGCGA CATGTACAAC CAGGCCGTCG ATGGCAAGTC GTTCAACTGC TACCCGGCCG 1020 GCGGCTTCGA CCCGAGCCAG GGCGCCGGCG GTGCGCACGA CCCGCACTAC ACCTCCGGCG 1080 TCGGCAACCG GCTGGCGTAT TTGGCGATCG AAGGCGCGAC GGTGCCGGCC GGTTCGGGCC 1140 TCACCCAGGC CCAGTTGGTC TGCAACGGCG ACACCGGCAT CGCCGGCATG GGCCGCGACA 1200 AGTTCGGCAA GATCTGGTAT CGCGCGCTGA CCGCGAAGTT CACCTCCAAC ACCACCTACC 1260 CGCAGGCGCG CGCGGCGACG CTGGCGGCGG CTACGGAGTT GTACGGCGCG AACTCGGCCG 1320 AGTACAACAC GCTGGCGCGG GCTTGGAGCG CAGTGAACGT CAACTGATCT TGTCGCGCAT 1380 CGATGCGACA GCGAACGGCC CGCTTTGTGC GGGCCGTTCT TTGTTGTGGG GCGTTGCACG 1440 GTTGAGGCCG AAATTTGAGA TGCCGCGAGC TTGGAGCAGA TGCCGTAGAC CTTCCCCGCC 1500 ATCATTCCCG CGCAACCTAC CTACCGTCAT TCCCGCGAAG GCGGGAATCC AGGGCTTCAT 1560 CGCGGCATGA CTCTGAAGTC TCTGGATCCC CGCGTTCGCG GGGATGACGA TCTGGAAGAG 1620 GCGCGGCGAA ACCCAACCGT CGTGGCGCCG CGAAACCCAC CTGCCGTCCT ACCGCGAAAC 1680 GCACCTACCG TCATTCCCGC GAAGGCGGGC ATCCAGGGCT TCATCGCGGC ATGACTCTGA 1740 AGTCTCTGGA TCCCCGCCTA CGCGGGGATG ACGATCTGGA AGAGGCGCGG CGAAACCCAA 1800 CCGCCGTGGT GCCGCGAAAC CCACCTGCCG TCCTACCGCG AAACTCACCT ACCGTCATTC 1860 CCGCGAAAGC GGGAATCCAG GGCTTCATCG CGACATGACT CTGAAGTCTC TGGATCCCCG 1920 CCTTCGCGGG GATGACGATC TGGAAGAGGC GCGGCGAAAC CCAACCGTCA TGGCGTCGCG 1980 AAACTCACCC GCCTTCCTAC CGCGAAACTC ACCTACCGTC ATTCCCGCGA AAGCGGGAAT 2040 CCAGGGCTTC ATCGCGACAT GACTCTGAAG TCTCTGGATC CCCGCCTACG CGGGGATGAC 2100 GATTTGGAAG AGGCGCGGCG AAACCCAACC GTCTTGGCGC CGCGAAAACC ACCCTCCTTC 2160 CTGCCGCGAA ACTCACCTGC CGTCCTACCG CGAAACTTAC CTACCGTCAT TCCCGCGAAG 2220 GCGGGAATCC AGGGCTTCAT CGAGGCAGGA CTCTGAAGTC TCTGGATTCC CGCCTTCGCG 2280 GGAATGACGG TCTGGAAGAG ACGCCGCGCA ACCCACCCGC CGACAATCCC GCGACCGCCA 2340 TACCTGCGCC GCAGCAAGGC CTGTGCGATC CTGACCGCCC CTCCTTCATC CCCGCGCCCA 2400 TGACCGTCGA CGCGCCGGCC GCCGTCTATC CCGATCCGCC CGGCGGCGAA CCGGAATTCC 2460 TGCGCGAGGC CGGCGATATC GACATCGAAG CGTTCGGCCG CCGCTTCGCC GGACATGCCT 2520 GCCGCTTCGA TCTGTCCAGT TACCGCGACG AGTTGTTCGC GCGCCACGCC ATCGCGTTCG 2580 CGCCGCAGCT CGAGCGTGCG GTGCCCAAGC GCCGTAGCGA ATTCCTGGCC GGACGCGTCT 2640 GCGCGAGCCG CGCGCTGGCG CGGCTCGGTT CGGCGCCAGC GACGATTCCG ATCGGCCGCG 2700 ACCGCGAACC GGTGTGGCCG GACGGGGTGG CCGCCTCGAT CAGCCACGCT GGCGATCGCG 2760 CGTTGTGTCT GGCCGTGCCG GCGGCCGACA CGCTCGGCCT CGGCGTGGAC ATCGAGCGGC 2820 CGCTCGACGC GCAGCGCGCG GCGGAGATCC GCGGCATCGT GGTCGACGCC GACGAGCAGG 2880 CGCTGATCCA GGCCGGCTTC GACGACCCGG CCGCTGGCCT GGCCGCGGTG TTCTCGGCCA 2940 AGGAGAGCCT GTACAAGGCG CTGTTCCCGC AGGTGCGGCG GTTGTTCGGT TTCGAGGCGA 3000 TGCGGCTGAC GCAGACCGGC GCGCAGCGGC TGGAGTTCGT CTGCGCCGAA GATCTCGCCG 3060 CGCAGGTCCG GCGCGGACAG CGCTATAGCG CGCACTACCG CTTCGACGCC GACGGCGGCG 3120 TGCTCAGCCT GGTCTGGCTG CCGCGCCCGG CTTGAGCGGC GCCGCGCCGG CCGGGCCGCC 3180 GCGTGCGTGC GGCTTTGTAC GACAATAGGC CGATCATGCG TTGCCTGTTG ATCGACAACT 3240 ACGACTCTTT CACCTGGAAC CTCGCCGACC TGATCGGCCG CGCGTTCGGC CAGGCGCCGC 3300 AGGTGCTGCG CAACGATGCG GCCGACTGGG ACGCGCTGCA GGCCGATGCA CGCTACGACT 3360 GCATCGTGGT CTCGCCCGGG CCCGGCAGCG CGGTGCGCGC GGCCGACCTG GGCCTGTCGC 3420 GCCGCGCCAT CGCCGATTCG CGGCTGCCGC TGCTGGGGGT GTGTCTGGGC TTCCAGGCCA 3480 TCGCCCACGC CCACGGCGGC CGCATCGCCC ATGCGCCCGA GCCGGTGCAC GGCCGCCCGG 3540 CGCGGCTGCA GCACGACGGC CGCGAGCTGT TCGCCGGACT GCCGCAAGGG CTGCGGGTGA 3600 TCCGCTACCA CTCGCTGATC GCCGCCGCGC CGCTGCCGCC GGAGCTGGAA GCCAGCGCGC 3660 ACAGCGAGGA CGGCGTGATC ATGGCGCTGC GCCATCGCCA TCGGCCGCAG TGGGGCGTGC 3720 AGTTCCATCC CGAGTCGGTG CTGAGCGAGC ATGGGCTGGC GATGATCGGC AATTTCCGCG 3780 ATCTGGTGCG CCGCCATCGC GGCGCGGCGA CGGTCGGTTG GAGCGAAGCC GCCGAGCCGG 3840 CGCTCGCGAA CCCGCCTGCG CCGACGCAGT CATCCACGCC CACCCTGCGC GTATGGCTGC 3900 GCCCGCTCGA CCCCGCGCCC GACGCCGAAA CCGTCTTCGC CCAGTGCTAC GCGCACGCGC 3960 CGCATGCGTT CTGGCTCGAC AGCCAGGTCG CCGACGAGGC CGGCTGCTCG TTCATGGGCG 4020 CGGCCGAGCC CGACGACGTG CTGAGCTACC GCGTCGGCGA CGACGACGCA GCGCTGTCGG 4080 CCGGGCAGGC GCTGCTGGCG TGGATGCGCG AAGAGCTGGC GCATGCGGTC GCCGCCGTCG 4140 ACGCGCCGCT GCCGTTCGAT TCCGCGCGGC TTCGTCGCTA TTTCGGTACG GTGCCGGCTC 4200 ATTTGCGCCT TTTTTTCNNN NTTTTTTTTT TTTTTTTTTT TTTTTTTTTT TTTTTTTTTT 4260 TTTTTTTTTT TTTTTTTTTT TTTTTTTTTT TT 4292 // ID Contig1049 standard; DNA; UNC; 4450 BP. XX DE Contig1049.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..4450 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene 433..975 FT /locus_tag="DeVSDRAFT_0017" FT /colour=11 FT CDS 433..975 FT /locus_tag="DeVSDRAFT_0017" FT /product="transcriptional regulator, TetR family" FT /note="PFAM: regulatory protein, TetR" FT /note="SPTR: Q414U6 Regulatory protein, TetR. Kineococcus radiotolerans SRS30216." FT /note="KEGG: art:Arth_4005 transcriptional regulator, TetR family " FT /note="COGs: COG1309 Transcriptional regulator category=K" FT /note="InterPro IPR001647" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT MSTEEKILNAAARLLEEHGAEAVTTRSVCQAAGVTAPTLYHHFGDKNGLVRALVDRGIAEFMVMKRAQRHSSDALTDLGQ FT GWRDWTDFGLERPSLFRLMIEAARADPSVTRESFELMRGYLERLHGEGRLQVKPQVAADAMWAAASGVQALFMQGMAPAQ FT IRSTADFLYQAVVAAVLKPV* FT " FT gene 1098..3659 FT /locus_tag="DeVSDRAFT_0018" FT /colour=2 FT CDS 1098..3659 FT /locus_tag="DeVSDRAFT_0018" FT /product="DNA mismatch repair protein MutS" FT /note="TIGRFAM: DNA mismatch repair protein MutS" FT /note="PFAM: DNA mismatch repair protein MutS domain protein; MutS III domain protein; MutS II domain protein; MutS IV domain protein" FT /note="SPTR: Q3BVY0 DNA mismatch repair protein mutS. Xanthomonas campestris pv. vesicatoria (strain 85-10)." FT /note="KEGG: xcv:XCV1352 DNA mismatch repair protein " FT /note="COGs: COG0249 Mismatch repair ATPase (MutS family) category=L" FT /note="InterPro IPR000432:IPR005748:IPR007695:IPR007696:IPR007860:IPR007861" FT /codon_start=1 FT /transl_table=11 FT /colour=2 FT /translation=" FT MSQMQKSQKPSGAKSSDEHTPLMKQYFAAKNEHPDVLLFFRMGDFYELFYDDARKAARLLDITLTQRGASAGQPIPMAGV FT PHHAAEGYLARLVALGESVAICEQIGDPALAKGIVERKVVRIITPGTVTDEALLNERRDTLLLAVSRGKSGWGLAWADLA FT AGRFLVNEVASEDALEAELARLEPAETLMPDEDGWGAFVAERSGMRRRAPWLFDVDSGRRQLLRFFGLHDLSGFGLEDKP FT LAVAAAAALLGYVEETQKQRLPHLTSIAVESGDGAIAMNAATRRHLELDSRIDGDSRTTLLGVLDSTVTPMGGRLLRRWL FT HRPLRDRAALRHRHQAVATLIESRAGDDVRERFRALGDLERILSRIALRSARPRDLSTLRDGLGLLPDVRGLLRPLDAPR FT LSALADELGEHDAHAHLLAEAIVPQPPVLARDGGVFAPGYDAELDELRTLSTNADQFLVDLEARERAASGIATLKVGYNR FT VHGYYLEISKAQAEKAPTHYTRRQTLSNAERYITEELKQFEDKVLSARERALSRERLLYEQLLDALNERLEPLKRCAAAL FT SELDVLCAFAERAASLDWSEPELTEAPGLCILRGRHPVVEAVRKDPFEPNDLVLDDSNGRRMLVITGPNMGGKSTYMRQN FT ALIVLLAHIGSFVPASRAMIGPIDRILTRIGAGDDLARGQSTFMVEMSETSYILHHASDRSLVLMDEIGRGTSTYDGLAL FT AEACARHLAHHNRAYTLFATHYFELTALAEPGNGIANVHLDAVEHGEQLVFMHAVKDGPADRSFGLQVAALAGLPKSVVK FT QARGRLIELENQGRETPKPSFAKAALDAPQQFGLFAAPSSAALTRWRKSIRTS* FT " SQ Sequence 4450 BP; 741 A; 1625 C; 1466 G; 615 T; 3 other; ACGCCGCACG CTCCCGCGCG ACGGAACACC GCCACCGCCG CCTCGCGCGC TGCCTGAAGC 60 ATCGACTCGG TGCCGGCGAC ATTGGCCTGA TGGAAGNCGG CATAGGTGTC CCACTCGGTG 120 AAATGGNCGG CGACATGGAA GACCGTGTCG CAACCGCGCA TGGCGGTCGC GACTGCCGCG 180 GTGTCGCCCA GGCCGGCCCG GCAGGCCTGG GCCCCGAGCG CCTCCACCGC GGCGGCGGAT 240 CCGGCACTGC GCGCCAGCGC CACCACCTCG ACGCCGTCGG CGCGCAGGCA CTGGATCAGG 300 ACGCCGCCCA GGAAACCGGA CCCGCCGGTC AGGAACACGC GCTTCATCGA GTGAGGGCTC 360 ATCGTATAGC ACCGCTATAG TCGGGACGCG GACTATATCA CCGCTATACT TGGCGAATGC 420 AAGAGGCCGG CCATGAGCAC TGAAGAAAAA ATCCTGAACG CGGCCGCCCG GTTGCTCGAA 480 GAACACGGTG CCGAGGCGGT CACCACCCGC TCGGTCTGCC AGGCGGCCGG GGTGACCGCG 540 CCCACGCTGT ACCACCACTT CGGCGACAAG AACGGGCTGG TTCGGGCGCT GGTCGATCGC 600 GGCATCGCGG AGTTCATGGT CATGAAGCGC GCGCAGCGGC ACAGCAGCGA TGCGCTGACC 660 GATCTCGGCC AGGGCTGGCG GGACTGGACC GACTTCGGCC TCGAACGCCC CAGCCTGTTC 720 CGTCTGATGA TCGAGGCCGC GCGCGCGGAC CCGTCGGTCA CCCGCGAATC CTTCGAGCTG 780 ATGCGCGGCT ACCTCGAACG CCTTCACGGC GAGGGCCGCC TGCAGGTCAA ACCGCAGGTC 840 GCCGCGGACG CGATGTGGGC CGCCGCCTCG GGCGTGCAGG CGCTTTTCAT GCAGGGCATG 900 GCGCCGGCGC AGATCCGCAG CACCGCGGAT TTTCTCTACC AGGCGGTCGT CGCCGCCGTG 960 CTCAAACCGG TCTGAACGCG CCGGCGCTGG CCGCAGGCCG GCGCTACACG GCAAACTGAC 1020 GCGGCAGCAT CGTCCCCCAC CCGGCCTCGC CCATCCGCCC TCGCGCGCGC TTCGCCGAGC 1080 CGCAGCGCTC CAAAAACATG AGTCAAATGC AGAAAAGCCA GAAACCCAGC GGCGCAAAGA 1140 GCTCCGACGA GCACACCCCG CTGATGAAGC AATACTTCGC CGCCAAGAAC GAGCACCCCG 1200 ACGTGCTGCT GTTCTTCCGC ATGGGCGATT TCTACGAACT GTTCTACGAC GACGCGCGCA 1260 AGGCCGCGCG CTTGCTCGAC ATCACCCTGA CCCAGCGCGG CGCTTCGGCC GGCCAGCCGA 1320 TTCCGATGGC GGGCGTGCCG CATCACGCCG CCGAGGGGTA TCTGGCGCGC TTGGTGGCGC 1380 TGGGCGAGTC GGTGGCGATC TGCGAGCAGA TCGGCGATCC GGCCCTGGCC AAGGGCATCG 1440 TCGAACGCAA AGTGGTGCGC ATCATCACCC CGGGCACGGT CACTGACGAG GCGCTGCTCA 1500 ACGAGCGCCG CGACACCTTG CTGCTGGCGG TCTCGCGCGG CAAGAGCGGC TGGGGCTTGG 1560 CCTGGGCGGA TCTGGCCGCG GGCCGTTTCC TGGTCAACGA AGTCGCCAGC GAAGATGCGC 1620 TGGAGGCCGA ACTGGCGCGG CTGGAGCCGG CCGAAACGCT GATGCCCGAC GAAGACGGCT 1680 GGGGCGCGTT CGTCGCCGAG CGCAGCGGCA TGCGCCGGCG CGCGCCGTGG CTGTTCGACG 1740 TCGACAGCGG CCGTCGCCAG TTGCTGCGTT TCTTCGGCCT GCACGATCTG TCCGGCTTCG 1800 GCCTGGAAGA CAAGCCGTTG GCGGTCGCCG CCGCGGCCGC GCTGCTGGGG TATGTCGAAG 1860 AAACCCAGAA GCAGCGCCTG CCGCATCTGA CTTCGATCGC GGTGGAATCC GGCGACGGCG 1920 CCATCGCCAT GAACGCGGCC ACCCGCCGCC ATCTGGAGCT GGACAGCCGC ATCGACGGCG 1980 ACAGCCGCAC CACCTTGCTC GGCGTGCTCG ACAGCACGGT CACGCCGATG GGCGGGCGCC 2040 TGCTGCGACG CTGGCTGCAC CGGCCGCTGC GCGACCGCGC GGCGCTGCGC CATCGCCACC 2100 AAGCGGTTGC CACGCTGATC GAAAGCCGCG CCGGCGACGA CGTGCGCGAA CGCTTCCGCG 2160 CGCTCGGCGA CCTGGAACGC ATCCTCTCGC GCATCGCCCT ACGCAGCGCG CGCCCGCGCG 2220 ACCTGTCGAC GCTGCGCGAC GGCCTGGGCC TGCTGCCGGA CGTGCGCGGC CTGCTGCGCC 2280 CGCTCGACGC GCCGCGCCTG AGCGCGCTGG CCGACGAACT CGGCGAGCAC GACGCGCACG 2340 CGCACCTGCT GGCCGAGGCG ATCGTGCCGC AGCCGCCGGT GCTGGCGCGC GACGGCGGCG 2400 TGTTCGCGCC CGGCTACGAC GCCGAACTCG ACGAACTGCG CACGCTGTCG ACCAACGCCG 2460 ACCAGTTCCT GGTCGACCTG GAAGCGCGCG AACGCGCCGC CAGCGGCATC GCCACGCTCA 2520 AAGTCGGCTA CAACCGCGTC CACGGCTATT ACCTGGAAAT CAGCAAGGCC CAGGCCGAGA 2580 AGGCGCCAAC CCACTACACC CGCCGCCAGA CCCTGAGCAA CGCCGAGCGC TACATCACCG 2640 AAGAGCTCAA ACAGTTCGAA GACAAGGTGC TGTCGGCGCG CGAGCGCGCG CTGTCGCGCG 2700 AGCGGCTGCT GTACGAACAG TTGCTGGACG CGCTCAACGA ACGCCTGGAA CCGCTCAAGC 2760 GCTGCGCCGC GGCCTTGTCG GAACTCGACG TGCTGTGCGC GTTCGCCGAA CGCGCGGCCA 2820 GCCTGGACTG GTCCGAACCC GAGCTCACCG AAGCGCCGGG CCTGTGCATC CTGCGCGGCC 2880 GCCATCCGGT GGTCGAGGCG GTGCGCAAGG ATCCGTTCGA GCCCAACGAT CTGGTGCTCG 2940 ACGACAGCAA CGGCCGCCGC ATGCTGGTCA TCACCGGCCC GAACATGGGC GGTAAGTCGA 3000 CTTATATGCG GCAAAACGCG CTGATCGTGC TGCTCGCGCA TATCGGCAGT TTCGTGCCGG 3060 CGTCGCGCGC CATGATCGGC CCGATCGACC GCATCCTCAC CCGCATCGGC GCCGGCGACG 3120 ACCTCGCCCG CGGCCAGTCG ACCTTCATGG TCGAGATGAG CGAGACCAGC TACATCCTGC 3180 ACCACGCCAG CGACCGCTCG CTGGTGCTGA TGGACGAGAT CGGCCGCGGC ACCTCGACCT 3240 ACGACGGCCT GGCCCTGGCC GAGGCCTGCG CGCGCCATCT GGCCCACCAC AACCGCGCCT 3300 ACACCTTGTT CGCCACGCAC TACTTCGAAC TGACTGCGCT GGCCGAACCG GGCAACGGCA 3360 TCGCCAACGT GCATCTCGAC GCGGTCGAGC ATGGCGAGCA ACTGGTGTTC ATGCACGCAG 3420 TCAAGGACGG CCCGGCCGAC CGCAGCTTCG GCCTGCAAGT GGCGGCGCTG GCCGGCCTGC 3480 CCAAGTCGGT GGTCAAGCAG GCGCGCGGGC GTTTGATCGA GCTGGAGAAC CAGGGCCGGG 3540 AAACGCCCAA GCCCTCGTTC GCCAAGGCCG CGCTGGACGC GCCTCAGCAG TTCGGCCTGT 3600 TCGCCGCGCC GTCCTCGGCG GCGTTGACGC GCTGGCGGAA ATCGATCCGG ACGAGCTGAC 3660 GCCGAAGCAG GCGTTGGAGG CGTTGTATCG GATCAAGGCG TTGAGCTGAT CGGTGCGTTG 3720 AGCTGATCGG TTTGCGGTGG GGGCAGGTTG GAATCCGCGG GTTTGTTGCG CGATGGCGCT 3780 GAAGTCTCTG GATCCCCGCG TTCGCGGGGA TGACGATCTG GAAGCGGCGC GGCGAGACTC 3840 AACCTGCCGC CGTGCCGCAA CCTGCCGCCA TACCGCGAAC CGCACACGCA TGCCGCGCAA 3900 CCCGCCTACC GTCATGCCCG CGAAGGCGGG CATCCAGGGC TTCACCGCGA CATGGCTCTG 3960 AAGTCTCTGG ATCCCCGCCT TCGCGGGGAT GACGACCGGG AAGCGACGCG GCGAGACTCA 4020 ATCTGCCGCC GTGCCGCGAA CCGCACACGC ATGCCGCACA ACCCACCTGC CGTCATGCCC 4080 GCGAACGCGG GCATCCAGGG CTTCATCGCG TCGCAGCTCT GAAGTCCAGG CCCCCACCGC 4140 GCCCCGCCTG CGAACGCACC ACCCGCTTCG CCAACCGCAA CACCCACATC CACACCCACA 4200 CCCACGATGC AGCCTGCGTC GCGATCCGCG CGCGACCCAG CCGTTAAACT GTGCGCCGGA 4260 ACGGACACCG GAGCGCATGT GGAAGCCCTG CTATTCCTCG TCGGCATCGT CGCCGGCCTG 4320 ATTCTCGCCC GCCTCTATCG CCCGGCCGCG GCAACGCAGG CCGCGCCGCC GGCCGTCGCG 4380 ATCCAGCCCG AGCCCAGCGC CGCCGTCGGC GACGACAGCG CGCCCGCGGN CGCCGAGGAA 4440 ACGCCGGCCG 4450 // ID Contig105 standard; DNA; UNC; 4402 BP. XX DE Contig105.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..4402 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene complement(798..1184) FT /locus_tag="DeVSDRAFT_0019" FT /colour=13 FT CDS complement(798..1184) FT /locus_tag="DeVSDRAFT_0019" FT /product="hypothetical protein" FT /note="SPTR: Q0K501 Putative iron uptake protein precursor. Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337))." FT /note="KEGG: reh:H16_B0117 putative iron uptake protein " FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MTQSSAPTAVATAGPDPRASARKPRAALSWRYRGEVAARAFAAIVIGYFVAYGFAAFFSMALPFARVDSVIAASLLSFFV FT WCAAAMYAFAARSAWRACWAPAAVAALLLGAAKLCGAVALFPAMTPTS* FT " FT gene 1503..2513 FT /locus_tag="DeVSDRAFT_0020" FT /colour=11 FT CDS 1503..2513 FT /locus_tag="DeVSDRAFT_0020" FT /product="GumN family protein" FT /note="PFAM: GumN family protein" FT /note="SPTR: Q8PJG0 GumN protein. Xanthomonas axonopodis pv. citri." FT /note="KEGG: xac:XAC2572 GumN protein " FT /note="COGs: COG3735 Uncharacterized protein conserved in bacteria category=S" FT /note="InterPro IPR010891:IPR010916" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT MRRAITALALLALLPAASAQTPPAATQTPPAGDIRDMDTLVVTGEQPGPGLWKVMRGGHVLWILGTVTPLPKDMTWLSRQ FT VETTIADSQEVIAPPSVSLGTELGMFRTMMLIPTALKARKNPDGKTLDEVVPADLYARWSVLKARYIGRDGGVEKWRPIF FT AAQELYEAAIKQSGMSLKGVVQPVVEKAAKQHGVPVTEARVTLKIDDPKATLKEFADSAMDDRECFAKTLSRIETDLEAM FT RARGNAWAVGDIATLRTLPQGDQYRTCLEALAATGVARRLNLGDLRQRVSANWLAVAEEAIAKNNSTFASLPVSDLLENG FT GLLDRLRAAGYTVEDP* FT " FT gene complement(2929..3291) FT /locus_tag="DeVSDRAFT_0021" FT /colour=13 FT CDS complement(2929..3291) FT /locus_tag="DeVSDRAFT_0021" FT /product="hypothetical protein" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT VGPLARSCARPKPREREDSRAARGAIASCASRCGDTVRRAEGPTRTGRAGCRHCEDPMTPTPLERTGEFERTDNGWVLKF FT WIREDAGLRLRHEVFDDTPALLRRIYEVFGRAGAGAGAAG* FT " FT gene complement(3593..4402) FT /locus_tag="DeVSDRAFT_0022" FT /colour=13 FT CDS complement(3593..4402) FT /locus_tag="DeVSDRAFT_0022" FT /product="Peptidoglycan-binding domain 1 protein" FT /note="PFAM: Peptidoglycan-binding domain 1 protein" FT /note="SPTR: Q3BM71 Hypothetical protein. Xanthomonas campestris pv. vesicatoria (strain 85-10)." FT /note="KEGG: xcv:XCV4411 hypothetical protein " FT /note="COGs: COG5373 membrane protein category=S" FT /note="InterPro IPR002477" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT RIWNPRRAVPGRAGPRIAATGYYAGQTENAVREFQRTHQIEPTGVADAATRQAIETAARERTQAQGQNPGEPTRAVPAQP FT QGQPPAPNAAAPNAPNAPNAPNAPNAPTPNAPAPAAPNPAAPLPAEAARPAPSGPANPPLLSDPANPNNRLYNQILGKVH FT EAEAARGIAPGPYSQNLAAALTVEALRERITQADRVELSRDGSLARVVQASTIGPELNRNTDGIATQQAVRQPMQESSEQ FT AAQVANNVRTQDANEQRQRQERSEKAAAL* FT " FT misc_feature complement(order(825..890,912..977,1008..1073)) FT /colour=11 FT /locus_tag="DeVSDRAFT_0019" FT /note="3 probable transmembrane helices predicted by FT TMHMM2.0" FT sig_peptide 1503..1583 FT /colour=11 FT /locus_tag="DeVSDRAFT_0020" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 1.000) with cleavage site probability 0.706 at FT residue 27" SQ Sequence 4402 BP; 678 A; 1559 C; 1518 G; 647 T; 0 other; CCGGCTGGCC CAGGCGCGCG CGCGCGTCCT GGATCAGCGC GTCGATGGAG TGGATCGTCT 60 TCAGCGGCTT GCCGGTTTCC GGGCGCTCGT AGCTGTCGGC GGCCTCGACG AAGAACTTCT 120 CGGTGTCGCC GTTGAACGCG GCGAACAAGC CGGCCGGCAT GTAGTTGGCG ACGAAGATCG 180 CCACGCCCGT GTAGGCGATC ATCAGATGGA ACGGCAGGCC GAGCACGCCG GTGAGGTTGT 240 GCCCGTCCAG CCACGCGCGC TGGCCGCCGT TTTTCGGGCG GAAGGTGAAG AAGTCCTTGA 300 AGATGCGCTT GTGGATCACG ATGCCGGTGA AGATCGCGAT CAGCATGAAC ATGCCGGCCA 360 GGCCGACGAT GTACATGCCC CAGGTCGGCG AATGCAGGTT GAAGTGCAGA GTGAAGAAGA 420 ACTCGCCGCC GGCGGTCTCG GGAATCTGCT TGCCGGTGGC CGGATCGAGG TTGAACAGGT 480 CCGGATCGCC GACGTCGTAA TACACCCCGC CCTGCAGCGA CTTGCTGCGC TCGCCGGGCA 540 AGGTGATGTA GTAGGCGTGC GGGTGTTCCT TCGACACCTT CTGCAACTGC GCCATCGCCG 600 CGTCCAGGTC GACGCTGTCG GCGCTGCGCT CGTGGCCGTG CAGGGCCGGC TGCATCCAGT 660 GGGTGAGTTC CTTGTCGAAG CAGGCGATGG TGCCGCCGAC GAAGATCACG AACAGCAGCC 720 AGCCGATCAC CAATCCGGCC CAGGTGTGCA GCCACGCCAT CGCTTGCGAG AAAGTGTTTT 780 TCATCGGACC TCCCGCCTCA GCTCGTCGGC GTCATGGCGG GGAACAGCGC GACTGCGCCG 840 CACAGCTTGG CCGCGCCCAG CAACAACGCC GCGACCGCCG CCGGCGCCCA GCACGCGCGC 900 CAGGCGCTGC GCGCGGCGAA GGCGTACATC GCCGCCGCGC ACCATACGAA GAAGCTCAGC 960 AGGCTCGCCG CGATCACGCT GTCCACGCGC GCGAAAGGCA ACGCCATGCT GAAGAACGCG 1020 GCGAACCCGT AGGCGACGAA ATAGCCGATC ACGATCGCCG CGAACGCGCG CGCCGCGACT 1080 TCGCCGCGAT AGCGCCACGA CAGCGCCGCG CGCGGCTTGC GTGCCGATGC GCGCGGATCG 1140 GGGCCGGCGG TCGCGACGGC CGTGGGGGCG GAGCTTTGCG TCATGGCGGC TTGGGCGGTG 1200 AGAACGGCCG GCGGCGTCCT GCCGGGAGCC GGAACGTCTG GAACGGGCAC GGAGCAAGGG 1260 ACAGCCGTGG ATCGGATCGG GTGGCGCGGC CGGGCGGGAT CGCCCGCCCC GGGCGCGCCG 1320 GTCCCGCTCA GTCTAGTTGG CAATAGTTCT CATTTGCAAA CCAGGACCGG CCAGCCAATC 1380 CGCCAAACCG ACACCGCGCA GACGCCGCAA CGTGTTACAG ATGCGCACAC CGGCAAAGGC 1440 GCGGACCGGC TACGATCCGC CACGCCTGCC TGCCCCACTC CCCCTCTTCA GGAACGCCAA 1500 GGATGCGCCG CGCCATCACC GCCCTCGCCC TGCTGGCGCT GCTGCCGGCC GCCTCGGCGC 1560 AGACGCCGCC CGCCGCGACG CAGACGCCGC CCGCCGGCGA CATCCGCGAC ATGGACACCC 1620 TGGTGGTCAC CGGCGAACAG CCCGGCCCCG GCCTGTGGAA AGTGATGCGC GGCGGCCACG 1680 TGCTGTGGAT CCTCGGCACG GTCACTCCGC TGCCCAAGGA CATGACCTGG CTGTCGCGCC 1740 AGGTCGAGAC AACCATCGCC GATTCGCAGG AAGTCATCGC CCCGCCCTCG GTCAGCCTCG 1800 GCACCGAGCT GGGCATGTTC CGCACCATGA TGCTGATCCC CACCGCGCTG AAGGCGCGCA 1860 AGAACCCAGA CGGCAAGACC CTGGACGAAG TGGTGCCGGC CGACTTGTAC GCGCGCTGGA 1920 GCGTGCTCAA GGCGCGCTAC ATCGGCCGCG ACGGCGGAGT GGAGAAATGG CGGCCGATCT 1980 TCGCCGCGCA GGAGCTCTAC GAAGCGGCGA TCAAGCAATC GGGGATGTCG CTCAAAGGCG 2040 TGGTCCAGCC GGTGGTGGAG AAAGCCGCCA AGCAGCACGG CGTGCCGGTG ACCGAGGCGC 2100 GGGTCACGCT CAAGATCGAC GACCCCAAGG CCACGCTCAA GGAATTCGCC GACAGCGCGA 2160 TGGACGACCG CGAGTGCTTC GCCAAGACCC TCTCGCGCAT CGAGACCGAC CTGGAAGCGA 2220 TGCGCGCGCG CGGCAACGCC TGGGCGGTCG GCGACATCGC CACCCTGCGC ACGCTGCCGC 2280 AGGGCGACCA ATACCGCACC TGCCTGGAAG CGCTGGCCGC GACCGGCGTG GCCCGCCGCC 2340 TCAACCTGGG CGACCTGCGC CAGCGCGTGA GCGCGAACTG GCTGGCGGTG GCGGAAGAAG 2400 CCATCGCCAA GAACAACAGC ACCTTCGCCT CGCTGCCGGT GTCGGACCTG CTGGAAAACG 2460 GCGGCTTGCT CGACCGTTTG CGTGCGGCGG GCTATACCGT CGAAGATCCC TGAGCGCCGA 2520 TCGTTTCGCC TGACTCGACA CCCCGGCCGC TCCCTGTAGG AGCGGCGCGA GCCGCGACCG 2580 CGACATCTCG CCTACGACGC AAGCGGCTAC CCCGCGGTCG CAGCTTGCGC AGCTCCTACA 2640 GTCGCAAACG AAACCACGGC CGCTCCCTGT AGGAGCGGCG CGAGCCGCGA CCGCGACACC 2700 TCGCCTACGA CGCAACCGGC TACCCCGCAG TCGCAGCTTG CGCAGCTCCC ACAGTCGCAA 2760 ACGAAACCAA GGCGGCTCCC TGTAGGAGCG GCGCAAGCCG CGACCGCGAC ACCTCGCCTA 2820 CGACGCGACC GGCTACCCCG CGGTCGCAGC TTGCGCAGTT CCTACAGTCG CGAACGAAGC 2880 TACGGCCGCG GTTTGTGGAC GCGGCGCGCG GCGCTGCAGC GGCGCGCTTC AGCCGGCCGC 2940 GCCGGCGCCC GCTCCCGCGC GTCCGAACAC CTCGTAGATC CGGCGCAGCA GCGCCGGGGT 3000 GTCGTCGAAG ACTTCGTGGC GCAGGCGCAG GCCGGCGTCT TCGCGGATCC AGAACTTGAG 3060 CACCCAGCCG TTGTCGGTAC GTTCGAATTC GCCGGTGCGT TCCAGGGGCG TCGGAGTCAT 3120 GGGGTCCTCG CAGTGCCGGC ATCCCGCCCG GCCGGTCCGG GTCGGGCCCT CGGCCCGGCG 3180 AACAGTGTCG CCGCAACGGC TCGCACAGCT TGCGATTGCG CCGCGCGCGG CGCGGCTATC 3240 CTCGCGTTCG CGCGGCTTGG GCCGCGCACA CGAGCGCGCA AGCGGCCCCA CGCGGGCGTC 3300 CGTACCTCCG CTGCCTTAGG AGCCAACGCT GCTCCTCGCG CGCCCGTACG GCACTGCGCT 3360 ATGAGCCGAC ACCGCTCCTC ACAGATCCGA ACTACGCCGC GCTATCGGCC ATAGCTGCCA 3420 CTCGCACCCG ACAGCGCCGA GATACGAATC AGCGTCGCTC CTCGCGCGCC CAAACTGCAT 3480 CGCGGCATGA GCCATGTCGC TAAGCCTCGC ACGCCCGCAC AACGAAAAAC CCCGCTCGCG 3540 CGGGGTTCCC GTAGTCCGTT ACGCAGCCAC CGCGAACGCG CGGCGCGCGG GTTTACAACG 3600 CCGCCGCCTT CTCCGAACGC TCCTGCCGCT GGCGCTGCTC GTTGGCGTCC TGCGTGCGCA 3660 CGTTGTTGGC GACCTGCGCG GCCTGCTCGC TGCTTTCCTG CATCGGCTGA CGCACTGCCT 3720 GCTGGGTGGC GATGCCGTCG GTGTTGCGGT TGAGCTCGGG TCCGATCGTG CTGGCCTGGA 3780 CCACGCGCGC GAGCGAGCCG TCGCGGCTGA GTTCGACCCG GTCGGCCTGG GTGATGCGCT 3840 CGCGCAGCGC TTCGACGGTA AGCGCGGCGG CGAGGTTCTG GCTGTACGGC CCCGGCGCGA 3900 TGCCGCGCGC GGCCTCGGCC TCGTGCACCT TGCCCAGGAT CTGGTTGTAG AGCCGGTTGT 3960 TCGGATTGGC CGGATCGCTC AGCAGCGGCG GATTGGCCGG GCCGGACGGA GCCGGACGCG 4020 CGGCTTCGGC CGGCAGCGGC GCGGCGGGGT TGGGCGCCGC CGGTGCCGGC GCGTTCGGCG 4080 TCGGCGCGTT CGGCGCGTTC GGCGCGTTCG GCGCGTTGGG CGCGTTGGGC GCAGCAGCAT 4140 TCGGCGCCGG CGGCTGGCCC TGCGGCTGCG CCGGCACGGC GCGGGTCGGC TCGCCCGGAT 4200 TCTGGCCCTG GGCTTGAGTG CGTTCGCGCG CAGCGGTTTC GATCGCCTGA CGGGTGGCCG 4260 CATCGGCCAC GCCGGTCGGT TCGATCTGGT GCGTGCGCTG GAACTCGCGC ACTGCGTTCT 4320 CGGTCTGCCC GGCGTAATAG CCGGTCGCGG CGATCCGCGG CCCTGCGCGT CCTGGAACTG 4380 CACGCCGAGG GTTCCAGATT CT 4402 // ID Contig1065 standard; DNA; UNC; 4917 BP. XX DE Contig1065.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..4917 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene 81..2564 FT /locus_tag="DeVSDRAFT_0023" FT /colour=4 FT CDS 81..2564 FT /locus_tag="DeVSDRAFT_0023" FT /product="putative alpha-1,2-mannosidase" FT /note="TIGRFAM: putative alpha-1,2-mannosidase" FT /note="PFAM: glycosyl hydrolase 92" FT /note="SPTR: A1G1L3 Putative alpha-1,2-mannosidase precursor. Stenotrophomonas maltophilia R551-3." FT /note="KEGG: xcb:XC_4310 hypothetical protein " FT /note="COGs: COG3537 Putative alpha-1 2-mannosidase category=G" FT /note="InterPro IPR005887:IPR012939" FT /codon_start=1 FT /transl_table=11 FT /colour=4 FT /translation=" FT MARTPVRHTRTSAFTAAAALRPLAAAVCLTLAAGAAAAAAAAPASNDPVREVNTFIGSKDDGNTFPGASAPFGLIQVSPI FT GEHYSGWRYDDPKIRGFGHSFISGAGCWEQGGQLSVLPTTGEIGPGKRFDTKEPKSFDHKAYGSAYSHDGEVGQAGYYKV FT RLTGEAAGPIEAEATALTRAAAERYTFPVGAAQGTILVNTGQANERHLVVGSTVEVVGDRAVEGRITTKSFCGGQQYTTW FT FRMEFDRPFASHGTWDETGGHPGGQSSMQGDTRPHGAWFTFDTSKNRAVTAVSAISHVDIEGARRNLRDEGARGGKPLAF FT DAMRKQSQEAWRKELGSVRVSGGSGDDRTVFYTALYHSLLQPLTGSDSDGRYRGYDTQIHKADGWTYYEYFSLWDTYRSQ FT NQLLAMLRPQRARDIGQSLLKIHEQNGWLPRWGYASYDSNVMTGDPVTPFMVDLWRFGALDGREQQAYAALRENAYGVPP FT ALVRSQGRAGNPSYLKDGFVQYDRAFPAKSMDVDPHHGGSSTLEYALGDCALSQMAQALGKSDDAATLRERGRNWTKVWD FT KDAADPELGFRGFPRPRVDGGAFYSETDGSYSPRSHHGFHEGTAWQYQWLTQQDVPGVVAAMGGAEQAGKRLDAFFAYDA FT LLADPAGAARKQWVVGPYSYYNQYRYNPNNEPDLHSPWMYTLIGQPWKTATVLRAAQTLFTNAPNGVTGNDDLGTMSAWY FT LFSAIGLYPAVPGTGELLLHAPRFEKVEMDLGNGKTLRIEAPGADGRGVQYVQGASFDGKPQDKVWLDWSALRAGGTLRF FT DLGRQPATGGWGTQAAALPVSACASPK* FT " FT misc_feature 138..206 FT /colour=11 FT /locus_tag="DeVSDRAFT_0023" FT /note="1 probable transmembrane helix predicted by FT TMHMM2.0" FT sig_peptide 81..206 FT /colour=11 FT /locus_tag="DeVSDRAFT_0023" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 1.000) with cleavage site probability 0.275 at FT residue 42" SQ Sequence 4917 BP; 807 A; 1767 C; 1690 G; 653 T; 0 other; CTGGATCTGA AGTAAGCCAA ACGGCCGCGG CGGCGCGCCC GCCGCCGCGG CTTCCCACTA 60 CTACGAGGGA TAGACCCACG ATGGCTCGCA CACCGGTTCG GCACACGCGC ACTTCGGCAT 120 TCACGGCGGC AGCGGCGCTG CGGCCCCTGG CTGCGGCGGT GTGCCTGACC CTGGCGGCCG 180 GCGCGGCCGC GGCCGCGGCC GCAGCGCCGG CGTCGAACGA CCCGGTGCGC GAGGTCAACA 240 CCTTCATCGG CAGCAAGGAC GACGGCAACA CGTTCCCGGG CGCCTCGGCG CCGTTCGGCC 300 TGATCCAGGT CAGCCCGATC GGCGAGCACT ACAGCGGCTG GCGCTACGAC GATCCCAAGA 360 TCCGCGGCTT CGGCCACTCC TTCATTTCCG GCGCCGGCTG CTGGGAGCAG GGTGGGCAGC 420 TGTCGGTGCT GCCGACCACC GGCGAGATCG GCCCGGGCAA GCGTTTCGAT ACCAAGGAAC 480 CCAAGTCCTT CGACCACAAG GCCTATGGCT CGGCCTACAG CCACGACGGC GAAGTCGGCC 540 AGGCCGGTTA CTACAAGGTG CGCCTGACCG GCGAGGCGGC CGGCCCGATC GAGGCCGAAG 600 CCACCGCGCT GACCCGCGCG GCGGCCGAGC GCTACACCTT CCCGGTCGGC GCCGCGCAGG 660 GCACGATCCT GGTCAACACC GGGCAGGCCA ACGAGCGCCA CCTGGTCGTC GGCAGCACCG 720 TCGAGGTGGT CGGCGACCGC GCGGTCGAAG GCCGCATCAC CACCAAGAGC TTCTGCGGCG 780 GCCAGCAGTA CACCACCTGG TTCCGCATGG AATTCGACCG TCCCTTCGCC AGCCACGGCA 840 CCTGGGACGA AACCGGCGGC CATCCCGGCG GCCAGTCGAG CATGCAGGGC GACACCCGCC 900 CGCACGGCGC CTGGTTCACT TTCGACACTT CGAAGAATCG CGCGGTGACT GCGGTCAGCG 960 CGATCTCGCA CGTCGACATC GAAGGCGCGC GCCGCAACCT GCGCGACGAG GGCGCGCGCG 1020 GCGGCAAGCC GCTGGCGTTC GATGCGATGC GCAAGCAGTC GCAGGAGGCC TGGCGCAAGG 1080 AACTGGGCTC GGTGCGGGTC AGCGGCGGCA GCGGCGACGA CCGCACCGTG TTCTATACCG 1140 CGCTCTATCA CTCGCTGCTG CAGCCCCTGA CCGGCAGCGA CAGCGACGGC CGCTACCGCG 1200 GTTACGACAC CCAGATCCAC AAGGCCGACG GCTGGACTTA CTACGAGTAT TTCTCGCTGT 1260 GGGACACCTA CCGCTCGCAG AACCAGTTGC TGGCGATGCT GCGGCCGCAG CGCGCGCGCG 1320 ACATCGGCCA GTCGCTGCTG AAGATCCACG AGCAAAACGG CTGGTTGCCG CGCTGGGGCT 1380 ATGCCAGCTA CGACAGCAAC GTCATGACCG GCGATCCGGT CACGCCGTTC ATGGTCGACC 1440 TGTGGCGCTT CGGCGCGCTC GACGGCCGCG AGCAGCAGGC TTACGCCGCG CTGCGCGAGA 1500 ACGCTTATGG CGTGCCGCCG GCGCTGGTGC GCAGCCAGGG CCGCGCCGGC AATCCGAGCT 1560 ATCTCAAGGA CGGTTTCGTC CAGTACGACC GCGCGTTCCC GGCCAAGAGC ATGGACGTGG 1620 ATCCGCACCA CGGCGGTTCG TCCACGCTCG AGTACGCGCT GGGCGATTGC GCGCTGTCGC 1680 AGATGGCGCA GGCGCTGGGC AAGAGCGATG ACGCGGCGAC CTTGCGCGAG CGCGGCCGCA 1740 ACTGGACGAA GGTCTGGGAC AAGGACGCGG CCGATCCGGA GCTGGGTTTC CGCGGCTTCC 1800 CGCGTCCGCG CGTGGACGGC GGCGCGTTCT ACTCCGAGAC CGACGGCAGC TACAGCCCGC 1860 GCTCGCATCA CGGTTTCCAC GAGGGCACTG CGTGGCAGTA CCAGTGGCTG ACCCAGCAGG 1920 ACGTGCCCGG CGTGGTCGCG GCGATGGGCG GCGCCGAGCA GGCCGGCAAA CGCCTGGACG 1980 CGTTCTTCGC CTATGACGCG TTGCTGGCCG ACCCGGCCGG GGCGGCGCGC AAGCAGTGGG 2040 TGGTCGGGCC GTACAGCTAC TACAACCAGT ACCGCTACAA CCCCAACAAC GAACCCGATC 2100 TGCACAGCCC GTGGATGTAC ACGCTGATCG GCCAGCCGTG GAAGACCGCG ACCGTGCTGC 2160 GCGCGGCGCA GACGCTGTTC ACCAACGCGC CCAACGGCGT CACCGGCAAC GACGACCTGG 2220 GCACGATGTC GGCCTGGTAT CTGTTCAGCG CGATCGGCCT GTACCCGGCG GTGCCGGGCA 2280 CCGGCGAACT GCTGCTGCAC GCGCCGCGGT TCGAGAAGGT CGAGATGGAC TTGGGCAACG 2340 GCAAGACCCT GCGCATCGAA GCGCCCGGCG CGGACGGCCG CGGCGTGCAG TACGTGCAAG 2400 GCGCGAGCTT CGACGGCAAG CCGCAGGACA AGGTGTGGCT GGACTGGAGC GCGCTGCGCG 2460 CCGGCGGAAC GCTGCGCTTC GACCTCGGCC GGCAGCCGGC CACGGGCGGG TGGGGCACGC 2520 AGGCCGCCGC CCTGCCGGTG TCGGCCTGCG CGTCGCCGAA GTGAGATGAG CCGATGAAGC 2580 CCTGGACCGC CGACGCCGCC CCCAACCGTC CTCCCCGCGG AAGCGTGGAT CCAGGGCTTC 2640 ACCGCGACAC CGCCGCACCG CCGTTGCCGG AGACCGCACG ATGAAACGCA CCCTGGCGAA 2700 ACTGACCCGC GCGCGCCTGC CGCTGGCGTT GTTCGGCCTG GTCGGCGCGG CCGTGGGCCT 2760 CGGCCCGGCC GCGAACGCCG CCGAAGAAAG CGCCGCATCG CGCAGCGCCG CAACCACGCC 2820 CGAACTCGTC CCGCTGCCCG CACGCGTGCA ACCGGGCGAG GGCGCGTTCG CGCTCGACGC 2880 CACCACCACG ATCTACGCCA ACAACGCCGA AGCCCGCGCC GTCGCCCAGT TGCTGCGCGA 2940 TGAGCTCGCC GCCCAGCAAG GCCTGACCCT GACGCTACGC AGCGGCGCGC CCAAGCACGG 3000 CAAGGGCGAG GACGAACCCT CGCGCTACGT GCAGTTCGTC GCCGAGCCCG CCGTGGCCAA 3060 GGCCGACGCC GGCGCGAACG AGCGCTACCG GCTGGAAGTC ACCACGCGCG GCATCCGCCT 3120 CGCCGGGCCG CCGGCCGGGC TGTTCTACGG CTACCAGACC TTGCGCCAGC TGCTGCCGGC 3180 TGCGCGCACG GCGCCTCCGC TGCGGGTCGG CGCGACCACC ATCGACGACG CGCCGCGCTT 3240 CGCCTACCGC GGCATGCATC TCGACGTTGG CCGCCATCTG TTCCCGCTGG ATTTCATCAA 3300 GCGCTATCTC GACCAGATGG CGCGCTACAA GCTCAACACC TTCCACTGGC ACCTTACCGA 3360 CGACCAAGGC TGGCGCCTGG AGATCAAGCG CTATCCGAAA CTCACCGGCG TGGGCGCGCA 3420 GCGCAAGGAA ACCGTGGTCG GCCGCAACAT CGATCCCTAT GTCGGCGACG GCAAGCCCTA 3480 CGGCGGCTTC TACACCCAGG AGCAAGCGCG CGAGATCGTC GCCTATGCGC GCGCCCGCCA 3540 CATCACCGTG ATCCCCGAAA TCGAAATGCC GGGCCACGCC CTGGCCGCGC TGGCCGCGTA 3600 TCCGGAACTG GCGTGCACGC CGGGCCCGTT CGAGGTCGGC ACCAACTGGG GCGTGTACGA 3660 CGACATCTTC TGCCCGAAGG AAGCGACCTT CGAATTCCTG CAGAACGTGC TCGACGAGGT 3720 GGTGGCGATC TTTCCCGCGC CGTACCTGCA CATCGGCGGC GACGAAGCGC CGAAGACGCG 3780 CTGGAAGGCC AGCGCCGAAG CGCAGGCGGT GATGCGCCGC GAAGGGCTGA AGGACGAGCA 3840 CGAGCTGCAG AGTTATTTCA TCCGCCGCAT GGAGAAGTTC CTGCACACGC GCGGCAAGCG 3900 CATCATCGGC TGGGACGAGA TCCTCGAAGG CGGGCTGGCG CCGGATGCGA CGGTGATGTC 3960 CTGGCGCGGC GAGGCCGGCG GCATCGCCGC CGCGCAGCAG GGCCACGACG TGATCATGAC 4020 CCCGACCCAG TGCTGCTACT TCGACTACGG CCAGGGCCCG GCCGCGCAGG AGCAGTGGAG 4080 CCTCGGCGGC GAGCTGAGCC TGGACAAGGT CTACGCCTAC GACCCGGTGC CGGCGGCGCT 4140 GAGCGCGGCG CAGGCGCGGC ATGTGCTGGG CGTGCAGGGC AACGTCTGGA CCGAACACCT 4200 CAAGACCGCG GCGATGGTCG AGTACATGGC GTTCCCGCGC CTGCTCGCGC TGGCCGAAGT 4260 GGCGTGGACG CCGCAGGCGC AGCGCGCCTG GCCGGACTTC CAGCGCCGCC TGGGCGGGCA 4320 GTTCGCGCGG CTCGACCGCG ACGCGGTCGG CTACCGCATT CCCGCGCCGC TGGGCCTGGA 4380 AAACGCGCTG ATCGTGCAAC AGGGTGAAGC GCACCAGTAC CGCCACACGG TGACGCTGAC 4440 CCCGGCCGTG CCCGGCGCGG CGATCCGCTA CACCCTCGAC GGCAGCGAGC CGGGCGAAGG 4500 CGCGCAGGTC TATGCCGCGC CGATCGAGGT CGTCCTGGAA CTCGACAAGC CGGTGCAGCT 4560 GCGCACCGTC ACCGTGCTCG CCGACGGCCG GCGTAGTGGG GTGCAGGCCG CCACGCTGCG 4620 TTATCGCAGT TACCTGCCGG CGAGCGATGC GCCGCAGTCC ACCTCCGCCG GATGGGAATA 4680 CCGCGTGTAC GAAGGCCTGT TCGCCAACCT GGACGAGTTC GCCATCGCGC AGACGCCGGC 4740 CGCGCAGGGC GTGGCCGATT CGCTCGACCT GGCCCGCTTC GGCCGCCGCA GCCGCTTCGG 4800 CGTGCGCTTC TACGGCTATA TGCGTGCGCC GGCCGACGGC GCGTACCGCT TCGCGCTGCA 4860 GGGCGACGAC CGTTCGGCGC TGTACATCGA TGGCGCGATG GCGATCGGCA ACGACAG 4917 // ID Contig1076 standard; DNA; UNC; 4236 BP. XX DE Contig1076.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..4236 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene complement(499..1827) FT /locus_tag="DeVSDRAFT_0030" FT /colour=9 FT CDS complement(499..1827) FT /locus_tag="DeVSDRAFT_0030" FT /product="Cl- channel, voltage-gated family protein" FT /note="PFAM: Cl- channel, voltage-gated family protein" FT /note="SPTR: Q3BR96 Chloride channel protein. Xanthomonas campestris pv. vesicatoria (strain 85-10)." FT /note="KEGG: xcv:XCV2986 chloride channel protein " FT /note="COGs: COG0038 Chloride channel protein EriC category=P" FT /note="InterPro IPR001807" FT /codon_start=1 FT /transl_table=11 FT /colour=9 FT /translation=" FT MLSEGAKRRIGSFLSGEAWKRRFALWGGALAVAFAAIAFAKLGDAASHLFASALTFSPYWALAITPAVFALLAWLTRGGL FT KGTRGSGIPQVIAVVQSRDHAPRNSWLSFKVVASKLLLTVAALAGGASVGREGPTVHIGAGIMHAIGRIMGYRDPYQTSR FT FLLAGGAAGIAAAFNTPLAGVVFAIEELSGTFEHHFSGVLLTAVIAAGVVSLGLMGNYAYFGHANVALAFGSGWWAIALC FT GVVCGLLGGAFARLIVAAGAGRPQWLFKHRMRSPVLFAAACGLALALLGLWLGKGMFGTGYEQARELLQADRPDGGWFGA FT GKLAANLVSSLAGIPGGLFAPALAVGAGIGDNLSQLVPSAPHQAVILLGMCGYLAGLTQAPLTSAVICMEMTDNRELMLP FT VLATVLLARACSALVCHTPIYKALAAQLVEANKAHARQESPP* FT " FT gene 3444..4229 FT /locus_tag="DeVSDRAFT_0031" FT /colour=12 FT CDS 3444..4229 FT /locus_tag="DeVSDRAFT_0031" FT /product="4-hydroxybenzoate polyprenyl transferase" FT /note="TIGRFAM: 4-hydroxybenzoate polyprenyl transferase" FT /note="PFAM: UbiA prenyltransferase" FT /note="SPTR: Q8PDE8 4-hydroxybenzoate octaprenyltransferase (EC 2.5.1.-) (4-HB polyprenyltransferase). Xanthomonas campestris pv. campestris." FT /note="KEGG: xcb:XC_0402 hydroxybenzoate octaprenyltransferase " FT /note="COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases category=H" FT /note="InterPro IPR000537:IPR006370" FT /codon_start=1 FT /transl_table=11 FT /colour=12 FT /translation=" FT MDHAHPHLPAPDWRRRLSLYWKLTRGDRPIGWLLLLWPTWWGLWIAAGGVPPLWTLFVFSAGVWLTRAAGCVINDYADRW FT LDPHVERTRNRPLATGELRGREALAVFAALMLAAFALVLTMNRLTVLMSVVGVALAASYPYLKRYTHLPQVYLGMAFGWG FT IPMAFAAVRGEVPAVAWLLYVANILWSTAYDTWYAMVDREDDLKMGSKSTAILFGDLDLVAIGVLYALMFAALALAGQRA FT GLGLCTTPGCSLRSRWWFTNS* FT " FT misc_feature complement(order(565..630,670..735,781..846,949..1014, FT 1060..1125,1165..1230,1276..1341,1603..1668,1708..1758)) FT /colour=11 FT /locus_tag="DeVSDRAFT_0030" FT /note="9 probable transmembrane helices predicted by FT TMHMM2.0" FT misc_feature order(3570..3638,3753..3821,3879..3947,3966..4034, FT 4077..4145) FT /colour=11 FT /locus_tag="DeVSDRAFT_0031" FT /note="5 probable transmembrane helices predicted by FT TMHMM2.0" FT sig_peptide complement(1705..1827) FT /colour=11 FT /locus_tag="DeVSDRAFT_0030" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 0.933) with cleavage site probability 0.559 at FT residue 41" FT tRNA complement(3006..3082) FT /locus_tag="DeVSDRAFT_R0006" FT /gene="tRNA-Arg1" FT /note="anticodon CCG, Cove Score=87.45" FT /product="tRNA_Arg" FT /colour=8 SQ Sequence 4236 BP; 777 A; 1337 C; 1407 G; 715 T; 0 other; AAACGCTCGC GGACGGGCGG CGACGTCTGT GGCTGGACTC CAGAGCCGGA CTATCGTTGA 60 ACGCGGCGCA TCACTTGGAA CAGTCCGCTG GCGAGGACTC GCTTACGCTC GAGGTCGTAC 120 CTGCTATTCA GGATTTTCCA GATATCCGAT TTGCGGACGA CAGTGCAGTA CTCGACACGA 180 ACGCTAAAGA AAAGGTCGCC GTCGCGGCCT GGGCCGCCCA ACGATGGCGA GTGAATCGGC 240 TACGGGTGAC GGGGGCGGGT GGAACCGTCG CGCTCGCGCG CCAGCGCGCC GACGCCGTGG 300 CCTCGGCGCT GCGCGAGCAA GGGGTTGGAG CCGACGTCGA TACTCTGGAT GGCGTGTCAC 360 TGCGTCGAAG CGTGCAAAGG GAAGGGACTG CCGCCGCTAG GATGGTGACG CTGCGTACCC 420 CGCAGGAGTA AGTCCACGGA ATCTCTAAAC CCTGATTGGG GTGTTGCGCC GCTCGTGACG 480 CGAACTGCAT GGCGCTGTCT AGGGAGGGGA TTCCTGGCGC GCATGCGCCT TGTTTGCTTC 540 TACCAACTGG GCGGCCAATG CCTTGTAGAT GGGCGTGTGG CAGACCAGCG CCGAGCACGC 600 TCGCGCCAGC AGAACAGTCG CCAGTACAGG CAACATCAAC TCGCGGTTGT CGGTCATTTC 660 CATACAGATG ACCGCTGAAG TCAGGGGCGC TTGGGTCAGT CCTGCGAGGT AGCCGCACAT 720 GCCGAGCAGG ATCACCGCTT GATGCGGCGC CGATGGCACC AACTGCGACA GGTTGTCGCC 780 GATGCCGGCA CCGACCGCGA GGGCCGGAGC GAACAACCCG CCCGGAATGC CGGCGAGGCT 840 GGACACCAGG TTGGCCGCGA GTTTCCCCGC GCCGAACCAG CCGCCATCGG GACGATCAGC 900 CTGCAGCAGC TCGCGTGCCT GTTCATAGCC GGTGCCGAAC ATGCCTTTGC CGAGCCAGAG 960 CCCGAGCAGC GCCAGCGCCA GGCCGCAGGC AGCGGCGAAC AACACCGGCG AACGCATGCG 1020 ATGCTTGAAT AGCCACTGCG GGCGGCCGGC GCCGGCAGCG ACGATCAGGC GCGCGAAGGC 1080 GCCACCGAGC AGGCCGCAAA CCACGCCGCA CAGCGCGATC GCCCACCAGC CGGAGCCGAA 1140 CGCGAGTGCG ACGTTGGCGT GGCCGAAGTA GGCATAGTTG CCCATCAGCC CCAGCGATAC 1200 GACGCCCGCG GCGATTACCG CGGTCAGCAG CACGCCCGAG AAATGGTGTT CGAAGGTGCC 1260 GCTGAGTTCC TCGATCGCGA AGACCACCCC GGCCAACGGC GTGTTGAACG CAGCCGCGAT 1320 GCCGGCCGCG CCGCCAGCAA GCAAGAAGCG CGAGGTCTGG TACGGATCGC GATAGCCCAT 1380 AATCCGTCCG ATCGCATGCA TGATGCCGGC GCCGATGTGC ACGGTCGGAC CTTCGCGGCC 1440 GACCGATGCG CCGCCAGCCA ACGCCGCCAC GGTCAGTAGC AACTTGCTGG CGACGACCTT 1500 GAACGAGAGC CAGCTATTGC GCGGCGCGTG ATCGCGGGAC TGCACCACGG CGATCACCTG 1560 TGGAATGCCG CTCCCTCGGG TTCCCTTGAG GCCGCCGCGA GTGAGCCAAG CCAACAAAGC 1620 GAAAACCGCT GGCGTAATGG CTAGGGCCCA GTACGGCGAG AATGTCAGCG CCGAGGCGAA 1680 CAGATGACTG GCGGCATCGC CAAGCTTGGC AAAGGCAATC GCCGCGAAGG CGACGGCCAA 1740 CGCACCACCC CATAAGGCGA ACCTGCGCTT CCAGGCTTCA CCTGACAGAA AGCTTCCGAT 1800 ACGGCGTTTG GCGCCCTCGC TCAACATGGG GCCATATTAA CACCTGCATC CGTGCTACTT 1860 CCTCTGAGAG GCTGTCAGCG GCCCCCTCAG GGGCCAAATA GAAACGCTGG TCCCGCTGCC 1920 GATACACCGG CTCGTTCGCC GTCTTCAGTT AGAGGCCTGG ACTACGTAGG CACGGTTGCA 1980 GGACGGTGCC AGCACGATGG CTGTTTTCGC AGTGGGCCAC GCTTAGCCTC TAATTGCTTG 2040 ATTTGATCCG ACCACAACAG CGGTGGATTG ATCGCCAAGT CGTTGAGCTG ATCGAGAAGC 2100 TCCAGGACTA CTCCAATCTC GGATTTGGCA GTGCATCAGT TGTCGCCGTG CCGTCAGGTG 2160 CAACTGTCGA GAGCACTCAT GGTCCCGTGA CTTACGCCGA CAGGGAAGGG CACGCCATAA 2220 TGCTTTACGC GCGAGGATCT AAGTCAGGTA AGGCTGACGA CGATTCTCAG TAGTGCAGAG 2280 ACCGCAGCGT TGCCACCACC AGATAGCTGT GCCGACTCGG CAGCGTTGGG GAGGCCAAGA 2340 ACCAGTAAAA AAGGGGGGCC GACTGGCCCC CCTCCCCTGG TGTTGCCAGC CGTCAGAGCA 2400 ACTTGGTGAT GGCAGTGAAC ACCGTCAGCA ACACTCCGAC AGGCAGACCG AGCTTCAGTG 2460 CAAACTTGCG ACTGAAACCT CGGCGGCTTT GCCAGCTGGC TGACACGCTC AGATGAACCA 2520 TATAGGCCTC CTTCAACGTG TTGCCCCGGG CTTCTTGAGG ACGCGCCATC GGGGCTCAGC 2580 CAGTTGGTGG GATTTTGTCT TTAGACGGAG ACAGGGCCCC ACCAACCACG CGCCGTGGGG 2640 TCAGCCTCTC ATAAGCACAG GCATCCGGGG AAGCGGTCTT TAGGCAAGTA GACATGGGAC 2700 AGGGGGCTGA GTGGCGGAAC TGGTGTTCCT CGGTTTGGAG GAGTTGCCTT GGAAGGGCAA 2760 AGTCGGAGCC AAACCGCTCT TTTTGGTCCA ACGCTAAGCC TTTGAAAACA AAGGGAGCGC 2820 GTGACAGACC GTTGGACTAA AAAACCAACG CCCTGAGAAA AGAGAGAGAA AAGTGGGGTT 2880 GATCTGCCCC GTTCCGGCGG AAACCGCGCC GACCTTGGTC CAACGCCAAA ACGCGAAAAC 2940 CGCCGAAAAC AAGGCGTTTT CGACGGTCGC TGCTCTCGGA ATAGAGAGGT TCGAACAGGG 3000 GTGTTTGGCG CGCCTGGAGG GATTCGAACC CCCGACCAAC GGCTTCGGAA GCCGCTACTC 3060 TATCCGGCTG AGCTACAGGC GCTTAGAGAT CGCGCACGGC CGGGTCGCGG CGTGCGGCCG 3120 TGCATCATAG CGGAATCCGG TGGCCTGGGT GAATCCGTGT CGTCGGGGCC CCCGGCGGTT 3180 CCGGGAATGT CGGCTGGCGT CGTCGCCAGC CTGGCCTTGC CGGCCCGGCC GGTCGGCCAG 3240 GCCGCATCGA CAAGTGCGGC TCGATCGGCC ACCGCACCGG CCCGATGAGG CCGGCGCTCG 3300 GCCACGACCA AAGCCCGCGC CAATCCGCCG CTGCGCTTTC CACTCGGCGC CCCCGGCCCG 3360 CGCCGCCCGC CAGCCCGACT CGGCAAGCCC GCGAACCCAC CCCGCCCAGG CGCCGCTTGC 3420 CCGCCGCGTT ACTCTATTGC GCTATGGACC ACGCCCACCC CCATCTGCCC GCGCCGGACT 3480 GGCGGCGGCG TCTGTCGCTG TATTGGAAGC TGACCCGCGG CGACCGGCCG ATCGGCTGGC 3540 TGTTGCTGCT GTGGCCGACC TGGTGGGGGC TGTGGATCGC GGCCGGCGGG GTGCCGCCGT 3600 TGTGGACCCT GTTCGTGTTC TCGGCCGGGG TCTGGCTGAC CCGCGCGGCC GGTTGCGTGA 3660 TCAACGATTA CGCCGATCGC TGGCTGGACC CGCACGTGGA GCGCACCCGC AACCGTCCGC 3720 TCGCCACCGG CGAGCTGCGC GGGCGCGAGG CGTTGGCGGT GTTCGCGGCG CTGATGCTGG 3780 CGGCGTTCGC GCTGGTGCTG ACGATGAACC GGCTGACCGT GCTGATGAGC GTGGTCGGGG 3840 TGGCGCTGGC GGCGAGTTAT CCCTACCTCA AGCGCTACAC CCATCTGCCG CAGGTGTACC 3900 TGGGCATGGC GTTCGGCTGG GGCATTCCGA TGGCGTTCGC GGCGGTGCGC GGCGAGGTGC 3960 CGGCGGTGGC GTGGCTGCTA TACGTGGCCA ACATCCTGTG GTCGACCGCG TACGACACTT 4020 GGTATGCGAT GGTCGATCGC GAGGACGATC TGAAGATGGG CTCCAAGTCC ACCGCGATCC 4080 TGTTCGGCGA TCTCGACCTG GTCGCCATCG GCGTGCTGTA CGCGTTGATG TTCGCGGCGT 4140 TGGCGCTGGC CGGGCAGCGC GCCGGGCTGG GGCTGTGTAC TACGCCGGGC TGCTCGCTGC 4200 GCTCGCGCTG GTGGTTTACG AATTCATGAT CGCGCG 4236 // ID Contig107 standard; DNA; UNC; 5074 BP. XX DE Contig107.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..5074 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene complement(1096..2106) FT /locus_tag="DeVSDRAFT_0024" FT /colour=7 FT CDS complement(1096..2106) FT /locus_tag="DeVSDRAFT_0024" FT /product="phenylalanyl-tRNA synthetase, alpha subunit" FT /EC_number="6.1.1.20" FT /note="TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit" FT /note="PRIAM: Phenylalanine--tRNA ligase" FT /note="PFAM: phenylalanyl-tRNA synthetase, class IIc; aminoacyl tRNA synthetase, class II domain protein" FT /note="SPTR: Q5GXY4 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) (Phenylalanine--tRNA ligase alpha chain) (PheRS). Xanthomonas oryzae pv. oryzae." FT /note="KEGG: xom:XOO_3023 phenylalanyl-tRNA synthetase alpha chain " FT /note="COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit category=J" FT /note="InterPro IPR002319:IPR004188:IPR004529:IPR006195" FT /codon_start=1 FT /transl_table=11 FT /colour=7 FT /translation=" FT MAQIEQLIQQALAEIAAADSPDAIEALRVSLLGKSGSVTAQLKQLGALPPDERKAAGEAINLARDRLTVALAGRKNVLDA FT AALDARLAAETIDVTLPGIDAARGGLHPVSRTIERMADIFGRLGFELADGPEIEDDWHNFEALNFPPHHPARAMHDTFYF FT PHDSAGVARLLRTHTSGMQVRYMLQHKPPLRMIALGKVYRSDSDQTHTPMFHQCEGLLIDEHSSFADLKGTLAEFVRAFF FT ERDFEMRFRPSYFPFTEPSAEVDIAWQQADGSTRWLEVLGCGMVHPNVLRNVGIDPERYTGYAFGMGVERLTMLRYGVDD FT LRSFFENDVRFLRQFA* FT " FT gene complement(2123..2551) FT /locus_tag="DeVSDRAFT_0025" FT /colour=13 FT CDS complement(2123..2551) FT /locus_tag="DeVSDRAFT_0025" FT /product="hypothetical protein" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MKGISRFGRSAWCALALLAGMAGAAAQASQAREQSDADALKRFGEVMLAKGRNEQCKVLDESRTKQFDDDVAAILKKLEK FT RVPAQQLLGVALNAAVATGAPESAANCDEATRQAVEAGSEQARGWAEELRGRRSRGNSTQGK* FT " FT gene complement(2697..3056) FT /locus_tag="DeVSDRAFT_0026" FT /colour=7 FT CDS complement(2697..3056) FT /locus_tag="DeVSDRAFT_0026" FT /product="ribosomal protein L20" FT /note="TIGRFAM: ribosomal protein L20" FT /note="SPTR: Q5GXY3 50S ribosomal protein L20. Xanthomonas oryzae pv. oryzae." FT /note="KEGG: xom:XOO_3024 50S ribosomal protein L20 " FT /note="COGs: COG0292 Ribosomal protein L20 category=J" FT /note="InterPro IPR005812:IPR005813" FT /codon_start=1 FT /transl_table=11 FT /colour=7 FT /translation=" FT MARVKRGVTARRRHKKILKQAKGYYNARRKVFRVAKQAVTKALQYAYIGRKQKKRNFRSLWITRINAAARINGMSYSRFI FT NGLLKAGITLDRKVLADIAVHDAKGFAALAEKAKSALAA* FT " FT gene complement(3069..3266) FT /locus_tag="DeVSDRAFT_0027" FT /colour=11 FT CDS complement(3069..3266) FT /locus_tag="DeVSDRAFT_0027" FT /product="ribosomal protein L35" FT /note="PFAM: ribosomal protein L35" FT /note="SPTR: Q5GXY2 50S ribosomal protein L35. Xanthomonas oryzae pv. oryzae." FT /note="KEGG: xom:XOO_3025 50S ribosomal protein L35 " FT /note="COGs: COG0291 Ribosomal protein L35 category=J" FT /note="InterPro IPR001706" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation="MPKIKTNRAAAKRFRKTASGKYKCGHANKSHILTKKATKRKRNLRQTNHVRAEDAGRLDRMLPYL*" FT gene complement(3559..4098) FT /locus_tag="DeVSDRAFT_0028" FT /colour=7 FT CDS complement(3559..4098) FT /locus_tag="DeVSDRAFT_0028" FT /product="translation initiation factor IF-3" FT /note="TIGRFAM: translation initiation factor IF-3" FT /note="PFAM: initiation factor 3" FT /note="SPTR: Q8P7Z3 Translation initiation factor IF-3. Xanthomonas campestris pv. campestris." FT /note="KEGG: xcb:XC_1651 translation initiation factor IF-3 " FT /note="COGs: COG0290 Translation initiation factor 3 (IF-3) category=J" FT /note="InterPro IPR001288" FT /codon_start=1 FT /transl_table=11 FT /colour=7 FT /translation=" FT LEIATISTPEKPNRKNQEIRVPRVRVIGSDGEMIGVLTRDEALRMAEEEALDLVEIQPNADPPVCKIMDFGKFRFEQQKK FT ANEAKKKQKQVEIKELKFRPVTDEGDYQIKLRNMRRFLEEGDKVKVNIRFRGREMSHQELGREMAARIEADLGEDIVVES FT RPRLEGRQMVMMIAPKKKT* FT " FT gene complement(4186..5073) FT /locus_tag="DeVSDRAFT_0029" FT /colour=7 FT CDS complement(4186..5073) FT /locus_tag="DeVSDRAFT_0029" FT /product="Anticodon-binding domain protein" FT /note="PFAM: tRNA synthetase, class II (G, H, P and S); Anticodon-binding domain protein" FT /note="SPTR: Q2P0Z5 Threonyl-tRNA synthetase. Xanthomonas oryzae pv. oryzae (strain MAFF 311018)." FT /note="KEGG: xom:XOO_3027 threonyl-tRNA synthetase " FT /note="COGs: COG0441 Threonyl-tRNA synthetase category=J" FT /note="InterPro IPR002314:IPR002320:IPR004154:IPR006195" FT /codon_start=1 FT /transl_table=11 FT /colour=7 FT /translation=" FT QVFNQGLHSYRDLPIRYGEFGSCHRNEPSGALHGILRVRGFTQDDGHIFCLEDQIEAEVTAFHQQALAVYGDFGFDDIQI FT KIALRPESRLGDDATWDKAEAALRSALSACNVQWQELPGEGAFYGPKIEYHLKDAIGRTWQLGTMQVDFMMPGRLGAEYV FT DENSQRRTPVMLHRAIVGSMERFIGILIEHHAGQFPAWLAPVQAAVLNITDAQGDYVEEVRKLLANQGFRVEADLRNEKI FT GRKIREHTLQRVPYLLVAGDREKETGTIAVRTRGGEDLGTMTVAEFASRLTSERA* FT " FT sig_peptide complement(2456..2551) FT /colour=11 FT /locus_tag="DeVSDRAFT_0025" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 1.000) with cleavage site probability 0.656 at FT residue 32" SQ Sequence 5074 BP; 740 A; 1688 C; 1693 G; 953 T; 0 other; GTGACGCGGC TGTCGTAGCC GCCCATCACC CCGCCGAGCG CGACGATGCG CTGGGCCGCG 60 CCGGCGCCGT CGGTGATGAC GATGAACTGC TCGTCGAGCG TCACTTCCTG CGCGTTGAGC 120 AGTTGCGTCG CCTCGCCCTG GCGCGCGCGC CGCGCGCCGA CCGGGCCGAC CAGGGTGTCG 180 CGGTCGAAGG CGTGCATCGG CTGGCCGATT TCCAGCATCA CGTACTGGGT CACGTCGACC 240 AGGAACGACA CCGGACGCAC GCCGCTGCGA CGCAGGCGCT CGGCCATCCA CACCGGCGTC 300 GGCGCGGTCG CGTCGACGCC TTCGACGACC CGGCCGCAGT AACGCGGCAC GTCCGCGCCG 360 GCGTCGAGTT CGACCGTCAA CGCCGCGTCG ATAGTCGCCG GCACCGGCTC GATCGCCAGC 420 GGCGCGACCG CGCTGCCGGT GGCGGCGGCG ACGTCGTAGG CGATGCCGCG CACGCTGAAG 480 CAATCGGCGC GGTTCGGGGT CAGTTTGATT TCGATGCTGG CGTCGGGCAG GCCCAGGTAC 540 TGCGCCAGCG GCTGGCCGAC CGGCGCATCG GCCGGCAGTT CCAGCAAACC GGAGGCGTCG 600 GCGTCGATGC CCAGTTCCTT GGCCGAGCAC AGCATGCCGA ACGATTCCAC ACCGCGCAGC 660 TTGGCGGCCT TGATCGACAG GCCGCCGGGC AGGGTCGCGC CGACCGTGGC CAGCGGCGCG 720 AGCAGGCCCG CGCGCGCGTT CGGCGCGCCG CACACGATCT GCACGGTGCC GCTGCCGGTA 780 TCGACCGAGC ACACCTGCAG GCGGTCGGCC TCGGGATGCT TTTCGGCGCT GACGATGCGG 840 GCGACGACGA CGCCGTCGAG CGCGGCGCCC AGCGCAGTCA CCTCTTCCAC TTCCAGCCCG 900 ATCGCGGTCA GGGTCGCGGC GAGCTCATCG CGCGAGGCGG CGGTCGGGAC GTGCTGGCGG 960 AGCCAGTTTT CGCTGAATTT CATGGGGATG GGGCCGGGAA TCGGAAAGGG GGGAAGCGAG 1020 AATCGGAACA CGCGATGCAG GATCGGGCGG AGACGCTGGA ACCGCGCTTG CGATTCGCCG 1080 CCGCCCGCTC CCGCCTCAGG CGAACTGCCG CAGGAAGCGC ACGTCGTTCT CGAAGAAGCT 1140 GCGCAGATCG TCGACGCCGT AACGCAGCAT GGTCAGCCGC TCCACGCCCA TGCCGAAGGC 1200 GTAGCCGGTG TAGCGCTCCG GGTCGATGCC GACGTTGCGC AGCACGTTCG GGTGGACCAT 1260 GCCGCAGCCC AGCACTTCCA GCCAGCGGGT GCTGCCGTCG GCCTGTTGCC AGGCGATGTC 1320 GACTTCGGCC GAGGGCTCGG TGAAAGGGAA ATAGCTCGGG CGGAAACGCA TTTCGAAATC 1380 GCGCTCGAAG AACGCGCGCA CGAATTCGGC GAGGGTGCCC TTGAGGTCGG CGAAGCTGGA 1440 ATGCTCGTCG ATCAGCAGGC CTTCGCACTG GTGGAACATC GGCGTGTGGG TCTGGTCGCT 1500 GTCGCTGCGG TAGACCTTGC CCAGCGCGAT CATGCGCAGC GGCGGCTTGT GCTGCAGCAT 1560 GTAGCGCACC TGCATGCCCG AGGTGTGGGT GCGCAGCAGA CGCGCGACGC CGGCGCTGTC 1620 GTGGGGGAAA TAGAAGGTGT CGTGCATCGC CCGCGCCGGA TGGTGCGGCG GGAAGTTGAG 1680 CGCTTCGAAG TTGTGCCAGT CGTCTTCGAT TTCCGGGCCG TCGGCCAGTT CGAAGCCGAG 1740 CCGGCCGAAG ATGTCGGCCA TGCGCTCGAT GGTGCGGCTG ACCGGGTGCA GGCCGCCGCG 1800 CGCGGCGTCG ATGCCGGGCA GGGTCACATC GATGGTCTCG GCGGCCAGGC GCGCGTCGAG 1860 CGCGGCGGCA TCGAGCACGT TCTTGCGCCC GGCCAGGGCG ACGGTCAGGC GGTCGCGCGC 1920 CAGGTTGATC GCTTCGCCCG CGGCCTTGCG CTCGTCCGGC GGCAACGCGC CGAGCTGCTT 1980 GAGCTGGGCG GTGACGCTGC CGGACTTGCC GAGCAGCGAT ACGCGCAGCG CTTCGATGGC 2040 GTCGGGGGAA TCCGCCGCCG CGATCTCGGC CAGCGCCTGC TGGATCAGTT GCTCGATCTG 2100 CGCCATGTGC TCGGGTGTCC TCTCACTTGC CTTGCGTTGA ATTGCCTCGC GATCGCCGGC 2160 CGCGGAGTTC CTCCGCCCAG CCCCGCGCCT GTTCGCTGCC CGCTTCGACC GCTTGCCGGG 2220 TCGCCTCGTC GCAGTTCGCC GCCGATTCAG GCGCGCCGGT CGCGACCGCC GCATTGAGCG 2280 CCACGCCGAG CAGTTGCTGG GCCGGAACGC GCTTTTCCAG CTTCTTGAGG ATCGCCGCGA 2340 CGTCGTCGTC GAACTGCTTC GTGCGCGATT CGTCCAGCAC CTTGCACTGC TCGTTGCGGC 2400 CCTTGGCCAG CATCACCTCG CCGAAACGCT TGAGCGCGTC GGCGTCGCTT TGCTCGCGCG 2460 CCTGCGAAGC CTGCGCCGCC GCTCCCGCCA TGCCTGCCAG CAACGCCAGC GCGCACCACG 2520 CGCTGCGGCC GAACCTGGAG ATTCCCTTCA TCGCATCCTC CTCACGGGGT TCGACGGCCC 2580 GCTTCTGCGG GCCCAGAAAC GACAATGGGG AAGGACTCGC GCCCTTCCCC ATGCCGTTGT 2640 GGTCCTCTTT CAAAAGTCCG CACATGGATG TGCGGGCTCT TGCGGAGGGA CCCGCATCAA 2700 GCCGCGAGCG CGCTCTTCGC CTTCTCTGCC AGAGCCGCAA AACCCTTCGC GTCGTGCACG 2760 GCGATGTCCG CCAGCACCTT ACGGTCGAGG GTGATGCCGG CCTTCAGCAG GCCGTTGATA 2820 AATCGGCTGT AGCTCATGCC GTTGATGCGG GCCGCCGCGT TGATGCGGGT GATCCACAGC 2880 GAACGGAAAT TGCGCTTCTT CTGCTTGCGA CCGATGTAGG CGTACTGCAG GGCCTTCGTC 2940 ACCGCCTGCT TGGCGACGCG GAAGACCTTG CGGCGGGCGT TGTAGTAGCC CTTGGCCTGC 3000 TTCAGGATTT TCTTGTGACG GCGACGCGCC GTAACACCAC GCTTAACTCG TGCCATTTTT 3060 CAGTCTCCTC ACAAATACGG AAGCATGCGG TCCAGACGGC CCGCGTCCTC GGCACGAACA 3120 TGGTTCGTCT GCCGCAGGTT GCGCTTCCGC TTGGTCGCCT TCTTGGTGAG GATGTGGCTC 3180 TTGTTGGCGT GGCCGCACTT GTACTTGCCG GAAGCGGTCT TCCGGAAGCG CTTGGCCGCC 3240 GCCCGATTGG TCTTGATCTT GGGCATTGCG ATGTCCTTTC GGATGGTTTT ATGTCACTGG 3300 CCTGGGCGGT GGCTGGGCAC GGCATTGCGT GCGGCCACTC TTTCCGTCCT GCCCTTGCCG 3360 GCTTGTAAGT CGTTGATAAC TAAAGAATCT ACGACAGGTC CGTGCATCTG CATACAACAA 3420 ACCCGGCGAA CCGGGCCGCA TAGTATGCGG GCTCGGCGCC GGGCTTGCAA ATATCTTCAG 3480 GCAAATCAGG GGATTGGGAG CCAAGCTCCC TGCCCCGACC GCGCCTGGGG CCTCCCCGCG 3540 GGCGGGGAAG GACCCGGCTC AGGTCTTCTT CTTGGGCGCG ATCATCATGA CCATCTGCCG 3600 CCCTTCCAGG CGCGGACGCG ACTCGACCAC GATGTCCTCG CCCAGGTCGG CCTCGATCCG 3660 CGCCGCCATT TCGCGACCGA GCTCCTGATG GCTCATTTCG CGGCCGCGGA AGCGGATGTT 3720 GACCTTGACC TTGTCGCCCT CTTCCAGGAA ACGGCGCATG TTGCGCAGCT TGATCTGGTA 3780 GTCGCCCTCG TCGGTGACCG GACGGAACTT GAGTTCCTTG ATCTCGACCT GCTTCTGCTT 3840 CTTCTTGGCC TCGTTGGCCT TCTTCTGCTG CTCGAAGCGG AACTTGCCGA AATCCATGAT 3900 CTTGCAGACC GGCGGATCGG CGTTGGGCTG GATTTCGACC AGATCCAGGG CTTCCTCTTC 3960 GGCCATGCGC AGCGCTTCGT CGCGCGTGAG CACGCCGATC ATCTCGCCGT CGCTGCCGAT 4020 CACGCGCACG CGCGGGACGC GGATTTCCTG GTTCTTTCGA TTCGGCTTCT CAGGGGTACT 4080 GATTGTTGCA ATCTCCAATG AAAACGCGAA CTTACGCGTC TAGGGCCGTC CCGGCCTGGC 4140 CGGGACGGAG GTTGTGGCGC TGCGCGCGGG TGGCGGCCGG CCGGGTCAGG CCCGCTCGCT 4200 GGTAAGACGC GAAGCGAACT CGGCGACGGT CATCGTCCCC AGGTCCTCCC CACCCCGCGT 4260 GCGCACCGCG ATCGTGCCGG TTTCCTTCTC GCGGTCGCCG GCGACGAGCA GGTACGGCAC 4320 GCGCTGCAGC GTGTGCTCGC GAATCTTACG GCCGATTTTT TCGTTTCGCA AATCCGCCTC 4380 GACCCGGAAC CCTTGATTTG CAAGGAGTTT CCTGACCTCT TCCACATAAT CGCCCTGGGC 4440 GTCGGTGATG TTGAGCACCG CCGCCTGGAC CGGCGCCAGC CAAGCCGGGA ATTGGCCGGC 4500 GTGGTGCTCG ATCAGGATGC CGATGAAACG CTCCATCGAA CCGACGATCG CGCGATGCAG 4560 CATCACCGGC GTGCGGCGCT GGCTGTTTTC GTCGACGTAC TCCGCGCCCA GACGGCCCGG 4620 CATCATGAAG TCGACCTGCA TCGTGCCGAG CTGCCAGGTG CGGCCGATCG CGTCCTTCAA 4680 GTGATATTCG ATCTTCGGGC CGTAGAACGC GCCTTCGCCC GGCAACTCCT GCCACTGCAC 4740 GTTGCACGCC GACAGCGCGC TGCGCAGCGC GGCTTCGGCC TTGTCCCAGG TGGCGTCGTC 4800 GCCCAGGCGC GATTCGGGGC GCAGCGCGAT CTTGATCTGG ATGTCGTCGA AACCGAAATC 4860 GCCGTACACC GCCAGCGCTT GCTGATGGAA CGCGGTCACT TCGGCTTCGA TCTGGTCTTC 4920 CAGGCAGAAG ATGTGGCCGT CGTCCTGGGT GAAGCCGCGC ACGCGCAAGA TGCCGTGCAG 4980 CGCGCCGGAG GGCTCGTTGC GATGGCAGGA GCCGAACTCG CCGTAGCGGA TCGGCAGATC 5040 GCGGTAGCTG TGCAGGCCCT GGTTGAACAC CTGC 5074 // ID Contig1083 standard; DNA; UNC; 3652 BP. XX DE Contig1083.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..3652 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene complement(124..1170) FT /locus_tag="DeVSDRAFT_0032" FT /colour=2 FT CDS complement(124..1170) FT /locus_tag="DeVSDRAFT_0032" FT /product="DNA polymerase III, delta subunit" FT /note="TIGRFAM: DNA polymerase III, delta subunit" FT /note="PFAM: DNA polymerase III, delta" FT /note="SPTR: Q5GXJ0 DNA polymerase III delta subunit. Xanthomonas oryzae pv. oryzae." FT /note="KEGG: xom:XOO_3140 DNA polymerase III delta subunit " FT /note="COGs: COG1466 DNA polymerase III delta subunit category=L" FT /note="InterPro IPR005790:IPR010372" FT /codon_start=1 FT /transl_table=11 FT /colour=2 FT /translation=" FT MELTPERLVAQLDQEPLRPAYLIAGPEPLRVLEAADAVRAAARAQGIGEREVFEAEGNQREPDWNALSASFRAPSLFASR FT RLLELRLPTGKPGKEGSEVIADFCAAPPHDATLLISCGEWSKQHGGKWSEAIGRIGHIAVAWAIKPHELPEWIERRLRQR FT GLRADRDAVQSLADRVEGNLLAAAQEVDKLALLSDGETLTVERMQALVADAARFDVFRVLDAAMNGQGAQVSRMLAGLRA FT EGEAVPALLGMVVMELQRTAALARVSARGGNLSSEFKAQRIWDSKQPMYRRALQRHDARRWEALLAQAGRVDRMAKGREA FT GDAWVALERLLLAVAEPRALRLLAVSAS* FT " FT gene complement(1199..1390) FT /locus_tag="DeVSDRAFT_0033" FT /colour=13 FT CDS complement(1199..1390) FT /locus_tag="DeVSDRAFT_0033" FT /product="conserved hypothetical protein" FT /note="SPTR: Q9PBG7 Hypothetical protein. Xylella fastidiosa." FT /note="KEGG: xfa:XF2177 hypothetical protein " FT /note="COGs: COG2980 Rare lipoprotein B category=M" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation="VRTAQGRRQAAGPRQSIELSRDYGSSPPNAIGTEGEREILMREMPREMSSAVLRRIGAVSERR*" FT gene complement(2584..3651) FT /locus_tag="DeVSDRAFT_0034" FT /colour=7 FT CDS complement(2584..3651) FT /locus_tag="DeVSDRAFT_0034" FT /product="tRNA synthetase, valyl/leucyl, anticodon-binding" FT /note="PFAM: tRNA synthetase, valyl/leucyl, anticodon-binding" FT /note="SPTR: A1FXZ5 Leucyl-tRNA synthetase. Stenotrophomonas maltophilia R551-3." FT /note="KEGG: xac:XAC2781 leucyl-tRNA synthetase " FT /note="COGs: COG0495 Leucyl-tRNA synthetase category=J" FT /note="InterPro IPR002302:IPR013155" FT /codon_start=1 FT /transl_table=11 FT /colour=7 FT /translation=" FT RGRGQQVDERAKYWTPVDQYIGGIEHAMLHLMYFRFYHKLMRDQGLVNSDEPAVNLLTQGMVIAETYYRTGAEGRPDWIN FT PADVEVQRDERGRIVGATLKADGLPVEIGGIEKMAKSKNNGVDPKLMVDKYGADTVRLFSMFAAPPDQSLEWNEAGVEGM FT ARFMRRLWTAVHKHADGGAAPALDAAALSAAQKTLRRQIHETVQKVGSDYGRRLSFNTAIAAVMELLNHLYKFDDASDNG FT RALRQEALEAIVLLLNPITPHTSHALWQTLGHAETLLEDIAFPQADEAALTRDAVTLAVQVNGKLRGTIEVAVSAPKDEI FT EKLALAEPNAVKYLEGLSVRKVIVVPGKIVNIVAS* FT " FT gene complement(1781..3199) FT /locus_tag="DeVSDRAFT_0035" FT /colour=9 FT CDS complement(1781..3199) FT /locus_tag="DeVSDRAFT_0035" FT /product="Glutathione S-transferase, N-terminal domain" FT /note="PFAM: Glutathione S-transferase, N-terminal domain" FT /note="SPTR: Q7NZL7 Probable glutathione S-transferase family protein (EC 2.5.1.18). Chromobacterium violaceum." FT /note="KEGG: cvi:CV0905 probable glutathione S-transferase family protein " FT /note="COGs: COG0625 Glutathione S-transferase category=O" FT /note="InterPro IPR004045" FT /codon_start=1 FT /transl_table=11 FT /colour=9 FT /translation=" FT VERGRRGRHGAIHAPAVDRGAQARRRRRRAGAGRGRAERRAEDPAPADPRDRAEGRQRLRPPPELQHRDRRGDGTAQPPV FT QVRRRQRQRPRPAPGSAGSDRAAAQPDHPAHQPRAVADPGPRRDAAGGHRLPAGRRGRADARRGDPGGAGQRQAARHHRG FT RGQRAQGRDREAGPGRAERGQVPGRPERAQGDRGAGQDRQHRRQLKPRAADRSRTCAGPAARRACMRVLRAQAGHRIVRS FT PTANPESRPMTAILYCHPDSGFSYKVALALDLLGVEYEQRQVNIRIAREQRSAEFRAVAAHGEVPVLLIDGLNLCQSNVI FT LDYLATRQDAAGGPRRLDGAELVQRLHVREWLSWEANRVSLNLAHARYGRQFGAYDPALLAWYDRRSRADLDRLQAQLAQ FT TLWLAGDAPTIADVACMGYLCFTVEPWAEAAGVAHADWAQRWPALKAWYDRVLALPGARSAQAAFAGREIRY* FT " SQ Sequence 3652 BP; 488 A; 1279 C; 1326 G; 559 T; 0 other; ATCAGCCGCA CCTGCGCGAC CAGCGCGTCG CGTGCGGCGC GGGCGACGGC GAGTTGCCCG 60 TCGTGGATCG GATCGAAGGT GCCGCCGTAG AAAACCACGA GGCTCATGCG CGAACGCTGC 120 CGCTCAGCTT GCGGAAACCG CGAGCAGGCG CAGCGCGCGC GGCTCGGCCA CCGCCAGCAG 180 CAGCCGCTCC AGCGCCACCC AGGCGTCGCC GGCTTCGCGG CCCTTGGCCA TGCGGTCCAC 240 GCGCCCGGCC TGGGCCAGCA GCGCTTCCCA GCGGCGCGCA TCGTGGCGCT GCAGGGCGCG 300 GCGGTACATA GGCTGCTTGG AATCCCAGAT CCGCTGGGCC TTGAACTCGG ACGACAGGTT 360 GCCGCCGCGC GCCGATACCC GCGCCAGCGC GGCGGTGCGC TGCAGTTCCA TCACCACCAT 420 GCCCAGCAGC GCCGGCACCG CTTCGCCCTC GGCGCGCAGG CCGGCGAGCA TGCGCGAGAC 480 CTGCGCGCCC TGCCCGTTCA TGGCCGCGTC CAGCACCCGG AACACGTCGA AGCGCGCGGC 540 GTCGGCGACC AAGGCCTGCA TGCGCTCCAC CGTGAGGGTT TCGCCGTCGG ACAACAACGC 600 CAGCTTGTCG ACTTCCTGCG CCGCCGCGAG CAGGTTGCCC TCGACCCGGT CGGCCAGGCT 660 CTGCACCGCG TCGCGGTCGG CGCGCAGGCC GCGCTGGCGC AGGCGGCGCT CGATCCACTC 720 GGGCAATTCG TGCGGCTTGA TCGCCCAGGC CACGGCGATG TGGCCGATGC GGCCGATCGC 780 CTCGCTCCAC TTGCCGCCGT GCTGCTTGCT CCATTCGCCG CAGGAGATCA GCAAGGTCGC 840 ATCGTGCGGC GGCGCGGCGC AGAAATCGGC GATGACTTCG CTTCCTTCCT TGCCCGGCTT 900 GCCGGTGGGC AGGCGCAGTT CCAACAGGCG CCGGCTGGCG AACAGGCTGG GCGCGCGGAA 960 GCTCGCCGAC AGCGCGTTCC AGTCGGGCTC GCGCTGGTTG CCTTCGGCTT CGAACACTTC 1020 GCGCTCGCCG ATGCCCTGGG CGCGCGCGGC GGCGCGCACG GCGTCGGCGG CTTCCAGCAC 1080 GCGCAGCGGC TCGGGGCCGG CGATCAGATA GGCCGGGCGC AGCGGTTCCT GGTCGAGCTG 1140 GGCGACGAGG CGCTCGGGGG TCAGTTCCAT GAGGCGGCGG GCCGGCCGGC GATGCGGCTC 1200 AGCGCCGTTC GCTGACCGCG CCGATCCGGC GCAACACCGC CGAACTCATT TCGCGGGGCA 1260 TTTCGCGCAT CAGGATTTCG CGCTCGCCCT CGGTGCCGAT GGCGTTGGGC GGGCTGGACC 1320 CGTAGTCCCG CGACAGTTCG ATGCTCTGGC GCGGCCCAGC GGCTTGCCGT CGGCCTTGCG 1380 CAGTTCGCAC ACCACCGCGT AGCGCAGGCT GTATTCCTGC ACGCGCCCGA GTTCGTCGAG 1440 CGCGGCGGGG TGTCGCCCCA GCGTTCGGAC ATCAGGTCCA GCACCGCCAC TTCCGCCGAG 1500 CCCTCCTGGG CCGGCACCGC GCCGGCGCGG GTCAGCGCCT GGGCCAGCGA TTCGGCCAGC 1560 GGGCTGTAGC GGTCGATCGA GACCACGCGC ACGGGGCCCA GGTCCGGCGG CAGGGTCAGG 1620 GCCTGGCGCA ATTGGAAACC GCAGGCCGAC AGGGCCAACA CGAGAGCCGC AAGCGACGTG 1680 CGGGCAAGAA GGGAGCGAGG CGTCATGGGG CGAAGTCTGG ACGAGGCGGC CGTGGGCATC 1740 AATAGCGAAG GCTGAACCGT GCGGCGCGGC GCGCGCCGGC TCAGTAACGG ATTTCGCGGC 1800 CGGCGAACGC GGCCTGCGCG CTGCGCGCGC CCGGCAGCGC CAGCACGCGG TCGTACCAGG 1860 CCTTGAGCGC CGGCCAGCGC TGCGCCCAAT CGGCGTGGGC GACGCCGGCG GCTTCGGCCC 1920 AGGGTTCGAC GGTGAAGCAC AGATAGCCCA TGCAGGCCAC GTCGGCGATG GTCGGCGCGT 1980 CGCCGGCCAG CCACAGGGTT TGCGCGAGCT GGGCCTGCAA ACGGTCGAGG TCGGCGCGGC 2040 TGCGGCGGTC GTACCAGGCC AGCAGGGCCG GATCGTAGGC GCCGAACTGG CGGCCGTAGC 2100 GCGCATGGGC GAGGTTGAGG CTGACCCGGT TGGCTTCCCA CGACAGCCAT TCGCGCACGT 2160 GCAGGCGCTG GACGAGCTCG GCGCCGTCGA GGCGGCGCGG GCCGCCGGCG GCGTCCTGGC 2220 GGGTGGCGAG ATAGTCCAGG ATCACATTCG ACTGGCACAG GTTCAGCCCG TCGATGAGCA 2280 GCACCGGCAC TTCGCCGTGC GCGGCGACGG CGCGGAATTC CGCCGAGCGC TGCTCGCGCG 2340 CGATGCGGAT GTTGACCTGG CGCTGCTCGT ACTCGACGCC GAGCAGATCC AGCGCCAGCG 2400 CGACCTTGTA GCTGAAGCCC GAATCGGGAT GGCAGTAGAG GATCGCGGTC ATGGGCCGGG 2460 ACTCGGGATT CGCAGTGGGA GATCGGACGA TGCGGTGGCC TGCCTGCGCG CGCAGCACGC 2520 GCATGCAGGC GCGCCGCGCG GCCGGTCCGG CGCAAGTGCG GGACCGGTCG GCGGCGCGCG 2580 GTTTCAGCTG GCGACGATGT TGACGATCTT GCCCGGCACC ACGATCACCT TGCGCACGCT 2640 CAGGCCTTCC AGGTACTTGA CCGCGTTCGG CTCGGCCAGG GCCAGCTTCT CGATCTCGTC 2700 CTTGGGCGCG CTGACCGCGA CCTCGATGGT GCCGCGCAGC TTGCCGTTGA CCTGCACCGC 2760 CAGGGTCACC GCGTCGCGCG TCAGCGCGGC CTCGTCGGCC TGCGGGAAGG CGATGTCCTC 2820 CAGCAGCGTC TCGGCGTGGC CCAGGGTCTG CCACAGCGCG TGGCTGGTGT GCGGGGTGAT 2880 CGGGTTGAGC AGCAGCACGA TCGCTTCCAG CGCTTCCTGG CGCAGGGCGC GGCCGTTGTC 2940 GCTGGCGTCG TCGAACTTGT ACAGGTGGTT GAGCAGTTCC ATCACCGCGG CGATCGCGGT 3000 GTTGAAGCTC AGGCGGCGGC CGTAGTCGCT GCCGACCTTC TGCACGGTCT CGTGGATCTG 3060 CCGGCGCAGG GTCTTCTGCG CGGCGCTCAG CGCGGCCGCG TCCAGCGCCG GCGCGGCGCC 3120 GCCGTCGGCG TGCTTGTGCA CCGCGGTCCA CAGCCGGCGC ATGAATCGCG CCATGCCTTC 3180 CACGCCGGCC TCGTTCCACT CCAGCGACTG GTCCGGCGGC GCGGCGAACA TCGAGAACAG 3240 GCGCACGGTG TCGGCGCCGT ACTTGTCGAC CATCAGCTTC GGGTCGACGC CGTTGTTCTT 3300 CGACTTGGCC ATCTTTTCGA TGCCGCCGAT CTCCACCGGC AGGCCGTCGG CCTTGAGCGT 3360 GGCGCCGACG ATGCGGCCGC GCTCGTCGCG CTGCACTTCG ACGTCGGCCG GATTGATCCA 3420 GTCGGGCCGG CCCTCGGCGC CGGTGCGGTA GTAGGTTTCC GCGATCACCA TGCCCTGGGT 3480 CAGCAGGTTC ACCGCCGGCT CGTCGCTGTT CACCAGCCCC TGGTCGCGCA TGAGCTTGTG 3540 ATAGAAGCGG AAGTACATCA GGTGCAGCAT CGCGTGCTCG ATGCCGCCGA TGTACTGATC 3600 CACCGGGGTC CAGTACTTGG CGCGCTCGTC GACCTGCTGG CCGCGCCCGC GA 3652 // ID Contig1090 standard; DNA; UNC; 3957 BP. XX DE Contig1090.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..3957 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene 1924..3021 FT /locus_tag="DeVSDRAFT_0036" FT /colour=11 FT CDS 1924..3021 FT /locus_tag="DeVSDRAFT_0036" FT /product="hydrolase (secreted protein)" FT /note="SPTR: A0X970 Hydrolase (Secreted protein) precursor. Shewanella pealeana ATCC 700345." FT /note="KEGG: sco:SCO0535 hydrolase (secreted protein) " FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT MAGFEPFDNVVNFARDWPVASVAHDWPRTKDGTMGRQRIFLVSVLAAAAVAAGCAAKTETDNDKTAAAAPAEAAAPAAAQ FT APVFFDDFSYPDLAAFQANGWKVRTETGHPGIKGAAWSAEGVSFHADIADTQGGAVRMSSVTNGKADKTRQTQFCHARKY FT REGTYAARIFFRDQPSFGPDGDEVIQTFYAISPLKAPMDKNYSETDFEYLPNGGWGENAKPAMWTTTWDTFQLEPWTKVN FT EFSRTEGSYAGWHTLVLTVADKKVSYYVDGKPFSVHSSAVYPEDFMSINFNLWFMPKGADGSLGPVDSPELREYQEDIDW FT VFFQEGTALTTADVEAQVAALRGKKLAHVDTVKEQNPPLASPCGL* FT " FT gene complement(3386..3883) FT /locus_tag="DeVSDRAFT_0037" FT /colour=13 FT CDS complement(3386..3883) FT /locus_tag="DeVSDRAFT_0037" FT /product="hypothetical protein" FT /note="SPTR: A0U933 Hypothetical protein precursor. Burkholderia cenocepacia MC0-3." FT /note="KEGG: bch:Bcen2424_3668 hypothetical protein " FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MEEAVAVRSCGSHRRRLGRPLAALAALLALSLAAAPAAFASGHLPGFPIPPRSFPDYAACKAFLEQTARDDRAQAEAQPR FT ETEPGVTRQMLVISDGVIESGREQAAYRAQIGAQFRRRDETRAAIVTTFSYDENSYRCQGGQLSGESGARGYYQPGYEPI FT PTPSP* FT " FT misc_feature complement(3755..3820) FT /colour=11 FT /locus_tag="DeVSDRAFT_0037" FT /note="1 probable transmembrane helix predicted by FT TMHMM2.0" FT sig_peptide complement(3761..3883) FT /colour=11 FT /locus_tag="DeVSDRAFT_0037" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 1.000) with cleavage site probability 0.986 at FT residue 41" FT tRNA 3248..3323 FT /locus_tag="DeVSDRAFT_R0007" FT /gene="tRNA-Thr1" FT /note="anticodon CGT, Cove Score=95.05" FT /product="tRNA_Thr" FT /colour=8 SQ Sequence 3957 BP; 607 A; 1356 C; 1439 G; 554 T; 1 other; CCGCGATCCG CCGAAGCCTC AGCTGCCCCG GTAGGATCTT GCAGGCCGGA TCGTTCATGC 60 GCGCATCCAC CAGCCCGTAC GTCGCCGGCG CGCTGCCGCG CTTGCTGACG TTGGCGAAGC 120 CGAAGCCGCG CACGTCGCCG GTGACGGCGA AGGCGTCGAC GCGATACGCC GCCGGCGCTG 180 GTCCGCCGGC GCTGAGCGCG CGCCCGGCCG GTTGGCCCTG CGGCTGCACC GAGCGCAGCC 240 GGCCCTTCGC CAGCAGGCCC TGTCCGCTGC CGCCGATGCC GCTATCGATG GTCGCGAACC 300 AGCCGCTTTC GCTGAAGCCG ATCCAACGAC CCGGATTGAC CGGGTCGGCC AGGCAGTAGG 360 TGGTCGCCGC CACCCGCGCC AGGCCGATGC GGTTTTCCTC GCTGAGCCAC GCGGCCACCA 420 CCATGCGGCC GCCGCCGGGC ACGGCGAGGT CGATGAAGTA GTCGTCGTTG CCGCCGAAGT 480 CGATCGGCGC GACCGCGAAG CTGGTATCGA CCGAGCCGTC CGGATTGACC CGCTGCAGGC 540 GGCCAGGCTT GGGCGCGGCG CCGGCGAGGT TGCCGACCAC CAGCACGCGG CCGTCGGACT 600 GCGGCGCCAG GCGTCCGGAA ATGTCCAGGT CGGGGCGGTG GTACGTGGTG TCGAGGCGGC 660 CGTCGGCGTT GTGGCGCAGC AGGGTGCCGC GCACGCCGCT GCCGGCCACG ATCGGATGGC 720 TGGACAGGAA CTTGCCGTCG GTCTGCAGCA CCAGCCCCTG CGCGCCGGCG TTGAGGCCGG 780 TGATGCGGTC GACGGTGCTG CCGTTGTCGC CGAACGCCGG ATCGGGGCGG CCGTCGGCGA 840 GGTAGCGTGC GATCAGGTTC CAGCGCCCGC CGCCGCCGGC GACGACGATC TTGCCGTCGC 900 TCTGCAGCAG CACGTGCTGG GCGCCGGCGC CCAGCGCCTG TTCGGGATGC GGCGTCACCA 960 CCACGCCCTT GCGGCCGAAG CCCGGATCGA GGCTGCCGTC GCTGCGGTAG CGCGCCAGCA 1020 CCACCGCGTC TTGGCCGGTA TCGGCGTCGA AGCGCTTGCC CGCGGCGACG ATGCGGCCGT 1080 CGGCTTGCTG CGCCAGGCCG TAGAACTCGT CCAGGCCGCC GACATCGAGG GTCTGCACGC 1140 CGTCGCGCGA GAAGCGGCGG TCGGGCTTGC CGTCGGCGAG GAAACGCAGC AACAGCGCAT 1200 CGCCCTTGTT GCCGCCGGCG ACCAGGATGC GGCCGTCGGC CTGCACCGCC AGCGCGCGGC 1260 AGGCGGCCGG CTTGGCGTCG GAGCGCAGCT TGACCCGCAC TTCGCCGCCG CTGCCGAAAC 1320 CGGCATCGAG CTTGCCGTCG GCGCCGAAGC GCAGCAGCCG GCAATTGAGG TAATCGCGGT 1380 GCAGCGGATC CTCGCCGCCG CCTTCGCCGA TGGTGAGGAT CTTGCCGTCG GCCTGGATGG 1440 CCACGGCGCG GACGAAATCG TCGTTGACCG GGAAATCGGT GACGACCAGG CCGCGGCGGC 1500 CGAAGGCGGG GTCGAGCGCG CCGTCGGGCA GCTTGCCCAG CGCCGACGGC GCCAGCGCGG 1560 CAAGCGACAG ACCGCAGCCG ATGCGAACGG CAGCGTGCGC GGGACTCGCG AGATTAAGGA 1620 CGAACGGATC ATGGGGGCTC CTGCTGCGAG AGATGGNCAA CGGTCGGCGG CCCCATGCAT 1680 CCCCGGCCGC GCGGCGAGAC TCGGCCATCG CCCCGGTGTG CGCAACCGGA TCCGGCCGCA 1740 AAACTGCACA TTCGGGTGGG CCAATGTGCC GAAGCGGCAA GGCGGTCGCG GAACCGGCGT 1800 GCCCGCCGAA GCGCCCCTGC GCAGGCGTGG GCGCGACGTG GCGTGACCGC TTAAGCGCTG 1860 TGGCCCGGGG CAGGACAGGC GAGCGCCGGA TCCGATGCGG GCAGCGGGCG GGCAGGGCCT 1920 GCCATGGCTG GATTCGAGCC GTTTGACAAC GTTGTCAATT TTGCGCGAGA TTGGCCCGTT 1980 GCTTCAGTCG CGCACGATTG GCCACGAACA AAGGACGGCA CCATGGGACG GCAGCGTATT 2040 TTTCTAGTCA GCGTTCTCGC AGCCGCGGCC GTCGCCGCCG GCTGCGCGGC GAAAACCGAA 2100 ACCGACAACG ACAAGACCGC GGCGGCCGCG CCCGCCGAGG CGGCAGCGCC GGCCGCGGCG 2160 CAGGCGCCGG TGTTCTTCGA CGATTTCAGC TACCCCGATC TGGCCGCGTT CCAGGCCAAC 2220 GGCTGGAAGG TCCGCACCGA AACCGGCCAT CCCGGCATCA AGGGCGCGGC CTGGTCGGCC 2280 GAGGGCGTGT CCTTCCACGC CGACATCGCC GACACCCAGG GCGGCGCGGT GCGGATGAGC 2340 TCGGTCACCA ACGGCAAGGC CGACAAGACC CGCCAGACCC AGTTCTGCCA CGCGCGCAAA 2400 TACCGCGAAG GCACCTACGC CGCGCGCATC TTCTTCCGCG ACCAGCCCAG CTTCGGCCCG 2460 GACGGCGACG AAGTCATCCA GACCTTCTAC GCCATCAGCC CGCTCAAGGC GCCGATGGAC 2520 AAGAACTACA GCGAGACCGA CTTCGAATAC CTGCCCAACG GCGGCTGGGG CGAAAACGCC 2580 AAGCCGGCGA TGTGGACCAC CACCTGGGAC ACCTTCCAGC TGGAGCCGTG GACCAAGGTC 2640 AACGAGTTCT CGCGCACGGA AGGCAGCTAC GCCGGCTGGC ACACGCTGGT GCTTACCGTC 2700 GCCGACAAGA AGGTGAGCTA CTACGTCGAC GGCAAGCCGT TCTCGGTGCA CAGCAGCGCC 2760 GTGTACCCGG AAGACTTCAT GTCGATCAAC TTCAACCTGT GGTTCATGCC CAAGGGCGCG 2820 GACGGATCGC TGGGCCCGGT GGATTCGCCG GAGCTGCGCG AGTACCAGGA AGACATCGAC 2880 TGGGTGTTCT TCCAGGAGGG CACGGCCCTG ACCACCGCCG ACGTGGAAGC GCAAGTGGCG 2940 GCGCTGCGCG GCAAGAAGCT GGCGCATGTC GATACGGTGA AAGAGCAGAA CCCGCCGCTG 3000 GCGTCGCCGT GCGGGCTTTG ATCGGCGCCA GGGCGCGCGT TGCGATTCAG GCGTACCCGA 3060 GCCTGGCCGC GGCGTGCGCT GCCGGCCCGG CGCAGCCCCC GTCCGTGGCG CGCCCGTAGC 3120 GCGCCGCGGC AGGCCGAACG CCGGGCGCGG CGGCGAATAC CGCCACGACG CCCGGCGCGA 3180 TCGGGCGCCG CCGGCGCGGG TCCAGAATTG ACCGCTCAGG CCCCGGCCGC CTAGAATTGC 3240 CGTCCTCGCC GGAATAGCTC AGTTGGTAGA GCGGCGCATT CGTAATGCGT AGGTCGCAGG 3300 TTCGACTCCT GTTTCCGGCA CCAGAGATAT CGATACGAGA ACGCCCGGCC TGCGCCGGGC 3360 GTTCTCGTTT TGCGTGTGGG ACGTTCTAAG GCGAGGGCGT CGGGATCGGT TCGTAGCCGG 3420 GTTGGTAATA ACCGCGCGCG CCGGATTCGC CGCTCAGCTG GCCGCCTTGG CAGCGGTAGC 3480 TGTTCTCGTC GTAGGAAAAG GTGGTGACGA TCGCCGCGCG CGTTTCGTCG CGGCGGCGGA 3540 ACTGCGCGCC GATCTGCGCC CGGTACGCGG CCTGTTCGCG GCCGGATTCG ATCACGCCGT 3600 CGCTGATCAC CAGCATTTGC CGGGTGACGC CGGGCTCGGT CTCGCGCGGC TGTGCTTCGG 3660 CCTGGGCGCG GTCGTCGCGC GCGGTTTGTT CGAGGAAGGC TTTGCACGCG GCGTAGTCGG 3720 GGAAGCTGCG CGGCGGGATC GGGAAGCCGG GCAGGTGGCC GCTGGCGAAG GCGGCGGGCG 3780 CGGCGGCGAG CGACAGCGCG AGCAGCGCGG CCAGCGCGGC CAGCGGCCGC CCAAGACGGC 3840 GGCGATGAGA TCCGCAAGAA CGCACGGCGA CGGCTTCTTC CATGAGTGTG GACTCCCGAT 3900 GCGGCGCGTG CGGGAGCACG CGGCGTCCGC GCAGTATCGC AGCACCGCGG CCGCACG 3957 // ID Contig1102 standard; DNA; UNC; 4146 BP. XX DE Contig1102.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..4146 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene complement(229..1638) FT /locus_tag="DeVSDRAFT_0038" FT /colour=10 FT CDS complement(229..1638) FT /locus_tag="DeVSDRAFT_0038" FT /product="glutamine synthetase, type I" FT /EC_number="6.3.1.2" FT /note="TIGRFAM: glutamine synthetase, type I" FT /note="PRIAM: Glutamate--ammonia ligase" FT /note="PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp" FT /note="SPTR: Q3BZ94 Glutamine synthetase, type I (EC 6.3.1.2). Xanthomonas campestris pv. vesicatoria (strain 85-10)." FT /note="KEGG: xac:XAC0204 glutamine synthetase " FT /note="COGs: COG0174 Glutamine synthetase category=E" FT /note="InterPro IPR004809:IPR008146:IPR008147" FT /codon_start=1 FT /transl_table=11 FT /colour=10 FT /translation=" FT MSLEHVEKLIKDHKVEFVDLRFTDMRGVQHHVTFPKSIVEPALFEDGKMFDGSSISGWKGINESDMILLPDSTTAFLDPF FT TADPTLVLTCDILDPATMQAYSRDPRGVAKRAEAYLKASGVADQAFFGPEPEFFIFDSVRYANEMGHTFFHIDSEEAAWN FT SGKEYEGGNSGYRPGVKGGYFPVAPLDSLHDIRAEMCKTLEQVGIEVEVHHHEVANAGQCEIGTKFNSLVAKADELLTMK FT YIIKNVAHRNGKTATFMPKPIVGDNGSGMHVHQSFAKGGVNLFSGDGYGGLSQLALWYIGGVFKHARAINAFTNSGTNSY FT KRLVPGFEAPVMLAYSARNRSASCRIPYVANPKARRIEMRFPDPIQSGYLTFAALMMAGLDGIKNQIDPGAPSDKDLYDL FT PPEEEKGIPTVCHSLDQALEALDKDRDFLKAGGVFTDDFIDGYIALKMQEVTKFRAATHPLEYQMYYAV* FT " FT gene 1807..2742 FT /locus_tag="DeVSDRAFT_0039" FT /colour=9 FT CDS 1807..2742 FT /locus_tag="DeVSDRAFT_0039" FT /product="Bacitracin resistance protein BacA" FT /note="PFAM: Bacitracin resistance protein BacA" FT /note="SPTR: A1FU54 Undecaprenol kinase (EC 2.7.1.66). Stenotrophomonas maltophilia R551-3." FT /note="KEGG: ret:RHE_CH00310 undecaprenol kinase protein " FT /note="COGs: COG1968 Uncharacterized bacitracin resistance protein category=V" FT /note="InterPro IPR003824" FT /codon_start=1 FT /transl_table=11 FT /colour=9 FT /translation=" FT MNRLRTNLGKAPFRYPDPPAAPPPTATRRLFRFPLPDSRSPAPMTDLLAALLLGIIEGITEFLPISSTGHLLIAQHWLGA FT RSDLFNISIQAGAILAVVAIYWKRLWGLAVGFTQRDNLDYLLKLGVAFGITAVLGIIVKKAGFTLPDHVTPIAWALVLGG FT VWMVAAEHFAAKRAAALGERSDITWTVAALVGIAQVVAGVFPGTSRSAATIFVALLAGTTSRAAATEFAFLVGIPTMFAA FT SGYELLGVIGTPAAAQEDWSALGVAFVASAVTAFIAVKWLLRYIQSHRFTAFAIYRVVLGIALLLLMPAGS* FT " FT gene 2753..3265 FT /locus_tag="DeVSDRAFT_0040" FT /colour=13 FT CDS 2753..3265 FT /locus_tag="DeVSDRAFT_0040" FT /product="hypothetical protein" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MSDPHTDPAQLEQELLDDQGLSAAERYAAFLAAVADSGRFWVAESGEYLLTLFDGEEQELLPAWPSAATARAALTQAPKL FT AGYAPAPRELAVWRERAAAAMGEAGVGVGVFPDTAMQCAVVAPVQLLEHLDALIADAGAAPGESEGASAGLDLAQAQRAL FT AQKFAKPKEG* FT " FT gene 3418..4146 FT /locus_tag="DeVSDRAFT_0041" FT /colour=13 FT CDS 3418..4146 FT /locus_tag="DeVSDRAFT_0041" FT /product="conserved hypothetical protein" FT /note="SPTR: Q5GU79 Hypothetical protein. Xanthomonas oryzae pv. oryzae." FT /note="KEGG: xom:XOO_4230 hypothetical protein " FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MKFPRITAIVAAVPVCAGLALVYAARPDSYGADAASDPTVTSLPRRQAGVADLTEYPWQVQLATRADGNALALLQADAIG FT QVRLDFSDRSMRFSGGANTLSMDYRIDGARIVSAHGDAGFAMTLAGTSQERPLAMDDLLSAHLRPPFDYWLEGSGAGQRL FT YLTGADGTRFVLQTRDAAYGAKGEDVSLEAEAGLRACTTGCSPNLPRPDCLSVRKLRWVKYMPQPASDWFLLPRHAFDGR FT RPE FT " FT misc_feature order(1945..2013,2056..2109,2167..2220,2248..2316, FT 2485..2553,2581..2649,2668..2736) FT /colour=11 FT /locus_tag="DeVSDRAFT_0039" FT /note="7 probable transmembrane helices predicted by FT TMHMM2.0" FT sig_peptide 3418..3492 FT /colour=11 FT /locus_tag="DeVSDRAFT_0041" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 1.000) with cleavage site probability 0.651 at FT residue 25" SQ Sequence 4146 BP; 614 A; 1419 C; 1403 G; 710 T; 0 other; ACAGCTCGGC CATGCCTTGC AGGTGTTCGC GCAGCAGAGC GATCACCTCG GGACGGTCGA 60 GTTGGCCGGC GCGGATCTGC ATCGGTCGCT GCGCTCCTGG GTCGAAAAAC GCAAAGCAAG 120 GCCCGAAGGC GCCGGCGCGT GGCCGCCGCC CTGGGGATAC GATCGTCGTT GGTCGTGCGT 180 GTCGCATCGC GATGCGGCCG CGGACGGCCG CACCGCGCGC ACCGTCGCTT AGACGGCGTA 240 GTACATCTGG TATTCCAGCG GGTGCGTCGC CGCGCGGAAC TTGGTCACTT CCTGCATCTT 300 CAGCGCGATG TAGCCGTCGA TGAAGTCGTC GGTGAACACG CCGCCGGCCT TGAGGAAGTC 360 GCGGTCCTTG TCCAGCGCTT CCAGGGCCTG GTCGAGCGAG TGGCACACAG TCGGGATGCC 420 CTTCTCCTCT TCCGGCGGCA GGTCGTACAG GTCCTTGTCG CTCGGCGCGC CCGGGTCGAT 480 CTGGTTCTTG ATGCCGTCCA GGCCGGCCAT CATCAGCGCG GCGAAGGTCA GGTAGCCCGA 540 CTGGATCGGG TCGGGGAAGC GCATCTCGAT GCGGCGCGCC TTCGGGTTGG CCACGTACGG 600 AATGCGGCAG CTCGCCGAAC GGTTGCGGGC CGAGTAGGCC AGCATCACCG GCGCCTCGAA 660 GCCCGGCACC AGGCGCTTGT AGCTGTTGGT GCCCGAGTTG GTGAAGGCAT TGATCGCGCG 720 CGCGTGCTTG AACACGCCGC CGATGTACCA CAGCGCCAGC TGCGACAGGC CGCCGTAGCC 780 GTCGCCGGAG AACAGGTTGA CGCCGCCCTT GGCGAAGGAC TGGTGCACGT GCATGCCGCT 840 GCCGTTGTCG CCGACGATCG GCTTGGGCAT GAAGGTCGCG GTCTTGCCGT TGCGGTGGGC 900 GACGTTCTTG ATGATGTACT TCATCGTCAG CAGCTCGTCG GCCTTGGCGA CCAGCGAGTT 960 GAACTTGGTG CCGATCTCGC ACTGGCCGGC GTTGGCGACT TCGTGGTGGT GCACTTCCAC 1020 TTCGATGCCG ACCTGTTCCA GCGTCTTGCA CATCTCGGCG CGGATGTCGT GCAGCGAATC 1080 CAGCGGAGCG ACCGGGAAGT AACCGCCCTT CACGCCCGGA CGGTAGCCGC TGTTGCCGCC 1140 TTCGTATTCC TTGCCCGAGT TCCACGCGGC TTCTTCCGAA TCGATGTGGA AGAAGGTGTG 1200 GCCCATCTCA TTGGCGTAGC GCACCGAGTC GAAGATGAAG AACTCGGGCT CCGGGCCGAA 1260 GAAGGCCTGG TCGGCGACGC CGCTGGCCTT GAGGTAGGCC TCGGCGCGCT TGGCCACGCC 1320 GCGCGGATCG CGCGAGTAGG CCTGCATGGT GGCCGGGTCG AGGATGTCGC AGGTCAGCAC 1380 CAGGGTCGGA TCGGCGGTGA ACGGATCCAG GAACGCGGTG GTCGAATCGG GCAGCAGGAT 1440 CATGTCCGAC TCGTTGATGC CCTTCCAGCC GCTGATCGAG GAGCCGTCGA ACATCTTGCC 1500 GTCTTCGAAC AGCGCCGGCT CGACGATCGA CTTGGGGAAG GTCACGTGGT GCTGCACGCC 1560 ACGCATGTCG GTGAAGCGCA GATCGACGAA TTCGACCTTG TGGTCCTTGA TGAGCTTTTC 1620 GACGTGTTCG AGAGACATGG CTGGATCCGG GAAGAGGTGG GGAATGGAGA ATCGGCAACG 1680 CGGGGGCGTG GTGCGCCTGC CAGGGATTAA AGCAAGTCGT ATGCCAAGTT TTATGGTGAT 1740 CCAAGCGATT GATTCGAAAG GATGATCGGC TAAGCACTCC CGGCCTTTGC ACCAACATCG 1800 TGCAAAATGA ACCGGCTTCG CACCAATTTG GGAAAAGCCC CTTTCCGCTA TCCTGACCCG 1860 CCGGCCGCGC CTCCCCCGAC CGCGACCCGG CGCTTATTCC GATTCCCCCT TCCCGATTCT 1920 CGATCCCCGG CCCCAATGAC CGACCTCTTA GCCGCCCTGC TCCTCGGCAT CATCGAAGGC 1980 ATCACCGAGT TCCTCCCGAT CTCCAGCACC GGCCACCTGC TGATCGCCCA GCACTGGCTC 2040 GGCGCGCGCT CGGACCTGTT CAACATCTCG ATCCAGGCCG GCGCGATCCT GGCGGTGGTG 2100 GCGATCTACT GGAAGCGCTT GTGGGGCCTG GCCGTCGGCT TCACCCAGCG CGACAACCTC 2160 GATTACCTGC TCAAGCTCGG CGTGGCCTTC GGCATCACCG CGGTGCTCGG CATCATCGTC 2220 AAGAAGGCCG GCTTCACCCT GCCCGACCAC GTCACCCCGA TCGCCTGGGC GCTGGTGCTG 2280 GGCGGCGTGT GGATGGTCGC GGCCGAGCAT TTCGCGGCCA AGCGCGCGGC CGCGCTCGGC 2340 GAGCGCAGCG ACATCACCTG GACGGTGGCG GCGCTGGTCG GCATCGCCCA GGTCGTGGCC 2400 GGCGTGTTCC CGGGCACCTC GCGTTCGGCG GCGACGATCT TCGTCGCTTT GCTGGCCGGC 2460 ACCACCTCGC GCGCGGCGGC GACCGAATTC GCGTTCCTGG TCGGCATCCC GACCATGTTC 2520 GCCGCCAGCG GCTACGAGCT GCTCGGCGTG ATCGGCACCC CGGCCGCGGC GCAGGAGGAC 2580 TGGAGCGCGC TGGGCGTGGC CTTCGTCGCC TCGGCGGTGA CCGCCTTCAT CGCGGTGAAA 2640 TGGCTGCTGC GCTACATCCA GAGCCACCGC TTCACCGCGT TCGCGATCTA CCGCGTCGTG 2700 CTCGGCATCG CGCTGTTGCT GCTGATGCCG GCCGGCAGCT GAGGAAGCCG CCATGTCCGA 2760 TCCGCACACC GATCCCGCCC AACTCGAGCA GGAACTGCTC GACGACCAGG GGCTGTCCGC 2820 CGCCGAGCGC TACGCGGCCT TCCTCGCCGC GGTCGCCGAC AGCGGCCGCT TCTGGGTGGC 2880 CGAGTCGGGC GAGTACCTGC TGACCTTGTT CGACGGCGAA GAACAGGAAC TGCTGCCGGC 2940 ATGGCCCTCG GCCGCTACCG CGCGCGCCGC GCTGACGCAG GCGCCCAAGC TGGCCGGCTA 3000 CGCGCCGGCG CCGCGCGAGC TGGCGGTGTG GCGCGAACGC GCCGCCGCGG CGATGGGCGA 3060 GGCCGGGGTC GGCGTCGGCG TGTTCCCGGA CACGGCGATG CAATGCGCGG TGGTCGCGCC 3120 GGTGCAGTTG CTCGAACATC TCGACGCGCT GATCGCCGAT GCCGGCGCGG CGCCGGGCGA 3180 ATCCGAAGGC GCCTCCGCCG GGCTCGACCT CGCCCAGGCG CAGCGCGCGC TGGCGCAGAA 3240 GTTCGCCAAG CCCAAAGAAG GCTGAGCGCC GGGTTGCGGC GACCCGCGTG CGCGCAAGCG 3300 CCGCACGCGG GCTGCGAATT TCGATAGCGT AATCGGCCTC GCACATCGCT GCCGACGCCG 3360 CATGCGCGTC TGCTTCACGC TGTGCGCCCC GATACGCAGA TCGCCATGGG TCCGAGCATG 3420 AAGTTCCCGC GCATCACCGC GATCGTCGCC GCAGTCCCCG TATGCGCCGG CCTGGCGCTG 3480 GTCTACGCCG CCCGACCGGA CAGCTACGGT GCCGACGCGG CCTCCGACCC GACCGTCACC 3540 TCGCTGCCGC GGCGCCAGGC CGGCGTCGCC GACCTGACCG AGTACCCGTG GCAGGTGCAA 3600 CTGGCCACCC GCGCCGACGG CAACGCCCTG GCCTTGCTGC AGGCCGATGC GATCGGCCAA 3660 GTCCGGCTGG ACTTCAGCGA CCGCAGCATG CGCTTCAGCG GCGGCGCCAA CACTTTGTCG 3720 ATGGACTACC GCATCGACGG CGCGCGCATC GTCTCCGCCC ACGGCGACGC CGGTTTCGCG 3780 ATGACGCTCG CCGGCACCTC GCAAGAGCGC CCGCTCGCGA TGGACGACCT GCTGTCGGCG 3840 CACCTGCGGC CGCCGTTCGA CTACTGGCTG GAAGGCAGCG GCGCCGGCCA GCGCCTGTAC 3900 CTGACCGGCG CCGACGGCAC CCGCTTCGTC CTGCAGACCC GCGATGCCGC GTACGGCGCC 3960 AAGGGCGAGG ACGTGAGCCT GGAAGCCGAA GCCGGGCTGC GCGCGTGCAC GACCGGCTGC 4020 TCGCCGAATC TGCCGCGGCC CGATTGCCTG TCGGTGCGCA AGCTGCGCTG GGTGAAGTAC 4080 ATGCCGCAAC CGGCGTCGGA CTGGTTCCTG CTGCCGCGGC ATGCCTTCGA CGGTCGCCGT 4140 CCCGAG 4146 // ID Contig1119 standard; DNA; UNC; 2087 BP. XX DE Contig1119.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..2087 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene complement(1..2085) FT /locus_tag="DeVSDRAFT_0042" FT /colour=9 FT CDS complement(1..2085) FT /locus_tag="DeVSDRAFT_0042" FT /product="condensation domain protein" FT /note="PFAM: condensation domain protein" FT /note="SPTR: Q1D5W2 Non-ribosomal peptide synthetase/polyketide synthase. Myxococcus xanthus (strain DK 1622)." FT /note="KEGG: mxa:MXAN_3779 non-ribosomal peptide synthetase/polyketide synthase " FT /note="COGs: COG1020 Non-ribosomal peptide synthetase modules and related proteins category=Q" FT /note="InterPro IPR000873:IPR001242" FT /codon_start=1 FT /transl_table=11 FT /colour=9 FT /translation=" FT HRLPQRSAGRTGMTAASELRAIAERAINLPTQKQDLFLARLDERGLDAALLPIVARADADAATPLSFAQRRMYLVERMSA FT HALYNLASGLELHGDLDVEALRQALELIVERHAVLRTVYREVDGIPQQQVLAPAPLLLEELTLHGEAEPQLRERLQAMEA FT QRFALDAETPLRIELYRLGERRWALLWCVHHIAFDAWSEGVLQSELVQAYSALTEGRAPTLAPLAAQYADYAAWEALWQR FT SASFRRHSDYWRDALAGVPDQLSLPFDQARPAAQVRGHAGAEARLTLPAALTRRLYGLTANLLPGRETTLYTLLQTAFGW FT LLARYGNTDDLCMATSIANRRRAELEPLIGCLVNTLAIRHRVEASLRFDQAAAAVADTVTAAFEHAEMPFEHVLERLEIA FT RDGVRPPLCQVLFVLQNVPDAGALALPGLSIAPLAQEQRLARFDLSLRIAERRDDEHLGLHLEYSTELFQATTAERLLRD FT FEAVLEQVCATPQIRFGEVALGDESRVAAVEPLPGATAQALLWQMPAQAVAVEEGPASWTYAQLRAAAGRIAGALDAAGV FT QPGAHVALCLPRTFAQLAAMAAVWHRGAAWLPLDPQHPDTRQISVLDDSGARVVVGWGAAPAWVPSAVHWLDAEAILDQS FT ASHHEEPPRVDVEADTPAYLIYTSGSTGTPKGVVVSQGNLAHYVAGVLPVLELSE FT " SQ Sequence 2087 BP; 340 A; 746 C; 692 G; 309 T; 0 other; TTCACTCAGC TCCAGTACCG GCAAAACGCC AGCGACGTAA TGCGCCAGAT TGCCCTGGCT 60 GACCACCACG CCCTTGGGCG TCCCGGTCGA ACCTGAGGTG TAGATCAGAT AAGCCGGCGT 120 ATCCGCCTCG ACATCGACGC GCGGCGGCTC TTCGTGATGC GATGCGCTCT GATCCAATAT 180 CGCTTCGGCA TCGAGCCAAT GCACCGCCGA CGGCACCCAT GCCGGCGCCG CGCCCCACCC 240 GACCACGACA CGCGCCCCGC TGTCGTCGAG CACAGAGATC TGCCGCGTAT CCGGATGCTG 300 CGGATCCAAC GGCAGCCATG CAGCGCCGCG ATGCCACACC GCGGCCATTG CCGCCAGCTG 360 GGCGAACGTG CGCGGCAGAC ACAGCGCCAC ATGCGCGCCG GGCTGCACAC CCGCCGCGTC 420 GAGCGCGCCG GCGATCCGAC CGGCCGCCGC ACGCAGTTGC GCGTACGTCC AACTGGCCGG 480 CCCCTCCTCC ACCGCGACCG CCTGCGCCGG CATCTGCCAT AGCAACGCTT GTGCAGTAGC 540 GCCCGGCAAA GGCTCGACCG CGGCAACGCG CGACTCGTCG CCTAGCGCCA CCTCGCCGAA 600 ACGGATCTGC GGCGTCGCGC AAACCTGCTC CAGCACCGCT TCGAAATCCC GCAGCAAGCG 660 CTCGGCCGTG GTGGCCTGGA ACAGCTCGGT GCTGTATTCC AGATGCAGCC CCAAATGCTC 720 GTCGTCGCGG CGCTCGGCGA TGCGCAGGCT CAGGTCGAAG CGCGCCAGCC GCTGTTCCTG 780 CGCCAGCGGC GCGATGCTCA GCCCGGGCAA GGCCAGGGCG CCGGCGTCGG GCACGTTCTG 840 CAGCACGAAC AACACTTGGC ACAGCGGCGG ACGGACGCCG TCGCGGGCGA TTTCCAGCCG 900 CTCCAGCACG TGCTCGAACG GCATTTCGGC ATGCTCGAAC GCGGCGGTGA CGGTGTCGGC 960 GACGGCCGCC GCAGCTTGGT CGAAACGCAG CGACGCCTCG ACCCGATGGC GGATCGCGAG 1020 GGTGTTGACC AAGCAGCCGA TCAGCGGTTC GAGTTCGGCG CGGCGGCGAT TGGCGATCGA 1080 GGTCGCCATG CACAGATCGT CGGTGTTTCC GTAACGCGCC AGCAGCCAGC CGAATGCGGT 1140 CTGCAGCAAG GTGTACAGCG TGGTCTCGCG GCCCGGCAGC AGATTGGCGG TCAAGCCGTA 1200 CAACCGCCGG GTCAACGCCG CCGGCAGCGT AAGGCGCGCT TCGGCGCCGG CGTGGCCGCG 1260 CACTTGCGCC GCGGGCCGGG CTTGGTCGAA CGGCAGCGAC AGCTGGTCGG GCACGCCCGC 1320 CAGCGCATCG CGCCAGTAAT CGCTGTGGCG GCGGAAGCTG GCGCTGCGCT GCCACAGCGC 1380 TTCCCACGCG GCGTAATCGG CGTACTGCGC GGCCAGCGGC GCCAGCGTCG GCGCACGACC 1440 CTCGGTCAGG GCCGAATAGG CCTGCACCAG TTCGCTCTGC AACACCCCCT CGGACCAGGC 1500 ATCGAAGGCG ATGTGGTGCA CGCACCACAG CAGCGCCCAG CGGCGCTCGC CGAGCCGGTA 1560 CAGCTCGATC CGCAGCGGCG TTTCGGCGTC GAGCGCGAAG CGCTGCGCTT CCATCGCTTG 1620 CAATCGTTCG CGCAGTTGCG GCTCCGCTTC GCCGTGCAGT GTGAGTTCTT CCAAGAGCAA 1680 GGGCGCAGGT GCCAGCACCT GTTGCTGCGG AATTCCGTCG ACTTCGCGAT AGACCGTGCG 1740 CAGCACCGCA TGGCGTTCGA CGATCAGCTC CAGCGCTTGC CGCAGCGCCT CCACGTCCAG 1800 GTCGCCGTGC AGTTCCAGAC CCGAGGCCAG GTTGTACAGC GCGTGCGCGG ACATCCGCTC 1860 GACCAGGTAC ATGCGGCGCT GGGCGAACGA CAGCGGCGTG GCCGCGTCCG CGTCGGCTCG 1920 GGCGACGATC GGCAGCAGCG CCGCGTCGAG CCCGCGCTCG TCCAGGCGCG CCAGGAACAA 1980 GTCCTGCTTC TGCGTCGGTA GGTTGATCGC GCGTTCGGCG ATGGCGCGCA GTTCGGAAGC 2040 AGCGGTCATT CCAGTTCGTC CAGCAGATCG TTGAGGAAGC CGATGTC 2087 // ID Contig1123 standard; DNA; UNC; 5194 BP. XX DE Contig1123.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..5194 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene complement(1963..3189) FT /locus_tag="DeVSDRAFT_0043" FT /colour=9 FT CDS complement(1963..3189) FT /locus_tag="DeVSDRAFT_0043" FT /product="protein of unknown function DUF214" FT /note="PFAM: protein of unknown function DUF214" FT /note="SPTR: Q8PCY5 ABC transporter permease. Xanthomonas campestris pv. campestris." FT /note="KEGG: xcb:XC_3667 ABC transporter permease " FT /note="COGs: COG0577 ABC-type antimicrobial peptide transport system permease component category=V" FT /note="InterPro IPR003838" FT /codon_start=1 FT /transl_table=11 FT /colour=9 FT /translation=" FT MDIRPILTTLRRHKTAAALIVFEVALTCAIICNALFLIQNRIARLQRPSGMVENELVAVRISNIGRAQEADALTQTDLAA FT LRAVPGVRSVAVSNQVRYGDSAWNSGFGPKPNQQVPSASAGVYYGDTQLVDTLGLKLVAGRNFREDEIVPLSQRLKPGAP FT PIPVVIITRALADKLFPGQDPLGRPIYSGDEDGARVIGVVEHLMRPNEFDGPASADYSVISPTRTDYDSGLYLLRVTDPS FT RREEVLKAASQALTRNGPQRILSKSNDTVENMAEAFNRTDRAMVWLLGAVCAALLIVTALGIVGLASFWVQQRTKQIGVR FT RALGATRGQILRYFQTENFLLTSIGIVLGMVLAFAINLLLMKFYELPRLPALYLPLGALSLWLLGQLAVYGPARRAALVP FT PALATRAA* FT " FT gene complement(3197..4525) FT /locus_tag="DeVSDRAFT_0044" FT /colour=9 FT CDS complement(3197..4525) FT /locus_tag="DeVSDRAFT_0044" FT /product="protein of unknown function DUF214" FT /note="PFAM: protein of unknown function DUF214" FT /note="SPTR: Q8PGH6 ABC transporter ATP-binding protein. Xanthomonas axonopodis pv. citri." FT /note="KEGG: xac:XAC3640 ABC transporter ATP-binding protein " FT /note="COGs: COG0577 ABC-type antimicrobial peptide transport system permease component category=V" FT /note="InterPro IPR003838" FT /codon_start=1 FT /transl_table=11 FT /colour=9 FT /translation=" FT MSGNSQFAYYLQLAARSFKRNKVLTALMVLAIALGIGAAMTTLTVFYVLSGDPMPGHSQNLFQPRLDPRSMTGYIPGSEP FT PDNISRFDGEALLREARADRQALMTSGNVAIEPRRDNLPAFRQNSRYTSADFFPMFQVPFQYGAAWSGKEDEGRARVAVI FT GKKLNERLFGGGNSVGKSVWVNNHELRVVGVIDAWHPQPNFYDLTVERGFGEAEELFVPFSTARDLRMGAQGNISCWGDS FT ADLPEGNYSVAAKCIWAQYWVELNSPQKVAAYRQYLDNYVAQQRAAGVYVRPTAPKLDGLMQWLDYKRVVPADVRLQMWL FT AFGFLAVCLLNTVGLLLAKFLRRSGEIGVRRALGATRRAIFAQCLVEAGSVGLAGGVLGLVLAQLGLWAVRQQSVGYAAL FT ARLDPAMLATTFVLAVAASVLAGLLPAWRACQVTPAIQLKSQ* FT " FT gene complement(4536..5192) FT /locus_tag="DeVSDRAFT_0045" FT /colour=9 FT CDS complement(4536..5192) FT /locus_tag="DeVSDRAFT_0045" FT /product="ABC transporter related" FT /note="PFAM: ABC transporter related" FT /note="SMART: AAA ATPase" FT /note="SPTR: Q8PGH7 ABC transporter ATP-binding protein. Xanthomonas axonopodis pv. citri." FT /note="KEGG: xac:XAC3639 ABC transporter ATP-binding protein " FT /note="COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component category=V" FT /note="InterPro IPR003439:IPR003593" FT /codon_start=1 FT /transl_table=11 FT /colour=9 FT /translation=" FT HVRDGEFVAVTGPSGSGKTTFLNIAGLLETFTGGEYKLDGEDVRDLSDDARSRLRNQKIGFIFQSFNLIPDLNLFDNCDV FT PLRYRRMPAAERRQRIEQALTQVGLGSRMRHYPTELSGGQQQRAAIARALAGSPRLLLADEPTGNLDSQMARGVMELLEE FT INAQGTTIVMVTHDPELAARAQRNVHIVDGMATDLRAEPSLVSASTPAVSTAADAATA* FT " FT misc_feature complement(order(2020..2085,2107..2172,2272..2337, FT 3079..3144)) FT /colour=11 FT /locus_tag="DeVSDRAFT_0043" FT /note="4 probable transmembrane helices predicted by FT TMHMM2.0" FT misc_feature complement(order(3242..3307,3383..3448,3512..3577, FT 4382..4447)) FT /colour=11 FT /locus_tag="DeVSDRAFT_0044" FT /note="4 probable transmembrane helices predicted by FT TMHMM2.0" FT sig_peptide complement(4409..4525) FT /colour=11 FT /locus_tag="DeVSDRAFT_0044" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 0.880) with cleavage site probability 0.446 at FT residue 39" SQ Sequence 5194 BP; 753 A; 1716 C; 1887 G; 838 T; 0 other; TCTGCGCCCG CGCGCGCAGT TCGCGGATCT TGAGCTGGCC GACCTTGTAC GCCAGCGCCT 60 GGCCCGGCCA GGCGATGTAG CGGTCGGCTT CGGCCTGGAT GTTGGGTTCC TCCATGTCGG 120 AGTGGTCGCG CATCCACTGC ACCATCTGCT CGCGGCTCCA GCGCTTGTAG TGCACGCCGG 180 TGTCCAGGAC CAGGCGGTTG GCGCGGATCA GCTCCTGCGA GAGCCGGCCG AAATCGCTGT 240 AGGGATCCTG GTAGAAGCCC ACTTCCTTGC CCAGGTCTTC CGAATACAGG CCCCAGCCTT 300 CGATGAAAGC GAGTTGGCCG AGCAGGGTGC GGAACTTCGG CAGCGCCGGC AGCTCGCGGG 360 CGATGGTCAT CTGCAAGTGA TGGCCGGGCA CGCCTTCGTG ATACGCCACT GCTTCGATCG 420 TGGTCAGCAG GCGCTTCTCC GGCTCGCCGG TGTTGACCGT GATCAGGCCC GGGCGCTTGC 480 CGTCGGGCGT GCCGGCCATG TACTGGGCCA TCGAGGCTTC CTTCTCGCGC CAGGCTTCGA 540 CCGCCTGCAC CTGCACCTTG GCCTTGGGCA GGGTGCCGAA CAGCTGCGGC AGCTTGGTCT 600 CCATCTGCGC CAGGTATTTG CGGTACTCCT CGAGGATCTG CTCGCGCGAG TGGGCGTGGT 660 GCTTGGGATC GGCGGCGACC GCTTCGCGCA TGGCCTTCAG GCTGGCATAG CCCAGGCGCG 720 CGGCGATCTC GCCCTGCGCC TTCTCGATCC GCTCGACCTC GCTCAGGCCG AGCTGGTGGA 780 TCCGCTCGGG CGCCATCGTG GTCGTGGTGT ATTGCTCGAT CGCATAGCGG TACAGCGCTT 840 CGCCGTTGGG CAGCGACCAC ACGCCGTATT GTTCGCGGCC GTGCGGCGCG TAGTCCTCGC 900 GCACGAACCG CGCCAGCTCG CGGAACGCGG GCCGCACTTC GCCGTCGACC GCGGCGATGA 960 TGTCGCGGCG CAGGCGCTCG CGCTCGGCGG CCGGGATCGA CTCGGGCATC TTCTTCAGCG 1020 ACGCGGCGAA GACGTTGTCG GCGCCGGCCG CGGCGGCCAG GTTGTCGCAC TGCGAGGCGA 1080 CCTTCTCCAG CAGATAGCGC GGCTGCATCA GCCCGTCCTT GGCGCCCTGG CGGGCCACGC 1140 CGGTCACCTG CTGCAGCAGT TTGGGCAGCG CGTGCAGGCG GGTGAGGTAT TGCTGGTACT 1200 GCTTGGCATC GTTGAACGGG AACGCGCTGA CCAGCGCGGT GAGGTTGAGG TGCACGCCGA 1260 CGAACTGGTC CAGCGGCATC TCGTGGGTCT TGAGTTCGTA GCCGCGGATC GCGCTCTTGA 1320 GCCAATCCAC CATCAGCCGC TGGTTGAGCC GGTCGGCTTC GGGGAAGCCG CGGGTGTCGA 1380 CCGCTTCGAA CTCGGCCAGC ATCTTTTCGT ATTCGCGCTG CATGTGCGCG GCGCCGGCCA 1440 GCGAGTAGTC GGCCCAGGCG TCGTTGTAGC GGTAGTCGCC GAAGAAGCTC GCCTGTTCCG 1500 GCAGCAGGCG CATCAGCTGT TCCCACTGCC GGTCGAGCAG GGCGTTGAAG GCGGCCACGC 1560 GGCGGGCGAC GTCGGCCGTG CCCGCGTCGC CGGCCGCCGG CGCGGCGGTC TTGGCCGCGC 1620 TGGCGGCGAA GGCGGGCAGC GCCGGCGCGG CGAGCGCGGC CGAGAGCAGG GCGACGCGCA 1680 GCGCAGGACC CAGGGCGCGC AGAGGGAAGC TCGATTTCAT GGACGACTCC GTGACGATGA 1740 GGCGGGGACG CGCGCGCGGT GCGGCGCCCC GGACCGTCCG GCGTGCGGCC GGACGGAGCG 1800 GAAGGAACCA GACAGTGGAT CGCTGCAAGC ATGCCGCGAA CGCGCCGTCG ACACTGCTGA 1860 CGAATGCGAG GCTTGCGCGG TGACTTGCGT AAGCCGCGTT CGCCGCCGGG TCGATACAAC 1920 CGATACGGCG AACGCGCTTG CGGTTGCGCT TGCGGAGAGG CGTCAGGCCG CGCGCGTGGC 1980 CAATGCCGGC GGCACCAGCG CCGCGCGCCG CGCCGGGCCG TACACCGCCA ACTGCCCGAG 2040 CAGCCACAGG CTCAGCGCGC CCAGCGGCAG ATACAGCGCC GGCAACCGCG GCAGTTCGTA 2100 GAACTTCATC AGCAGCAGGT TGATCGCGAA CGCCAGCACC ATGCCCAGGA CGATGCCGAT 2160 GGACGTCAGC AGGAAGTTCT CGGTCTGGAA ATAGCGCAGG ATCTGCCCGC GGGTGGCGCC 2220 GAGCGCGCGG CGCACGCCGA TCTGCTTGGT CCGCTGCTGC ACCCAGAAGC TGGCCAGGCC 2280 GACGATGCCG AGCGCGGTGA CGATCAGCAG CGCCGCGCAC ACCGCGCCGA GCAGCCACAC 2340 CATCGCGCGG TCGGTGCGGT TGAAGGCTTC GGCCATGTTT TCGACGGTGT CGTTGCTCTT 2400 GGACAGGATC CGCTGCGGGC CGTTGCGGGT CAGCGCCTGG CTGGCGGCCT TGAGCACTTC 2460 CTCGCGCCGG CTCGGGTCGG TGACCCGCAG CAGGTACAGA CCGCTGTCGT AGTCGGTGCG 2520 GGTGGGCGAG ATCACCGAAT AGTCGGCCGA GGCCGGGCCG TCGAACTCGT TCGGCCGCAT 2580 CAGGTGTTCG ACCACGCCGA TCACCCGCGC GCCGTCCTCG TCGCCGCTGT AGATCGGACG 2640 GCCGAGCGGG TCCTGGCCGG GGAACAGCTT GTCGGCCAGG GCGCGGGTGA TGATCACCAC 2700 CGGGATCGGC GGCGCGCCGG GCTTGAGCCG CTGCGACAGC GGAACGATCT CGTCCTCGCG 2760 GAAGTTGCGC CCGGCCACCA GCTTCAGGCC CAGCGTGTCC ACCAGTTGGG TGTCGCCGTA 2820 ATAGACGCCG GCGCTGGCGC TGGGCACTTG CTGGTTCGGC TTCGGGCCGA AGCCGGAGTT 2880 CCACGCCGAA TCGCCGTAGC GCACCTGGTT GGACACGGCG ACCGAGCGCA CGCCGGGCAC 2940 TGCGCGCAGC GCAGCCAGGT CGGTCTGGGT CAGCGCGTCG GCTTCCTGCG CGCGGCCGAT 3000 GTTGGAGATG CGCACCGCCA CCAGTTCGTT TTCGACCATG CCGCTGGGAC GCTGCAGGCG 3060 GGCGATGCGG TTCTGGATCA GGAACAAGGC GTTGCAGATG ATCGCGCAGG TCAGCGCGAC 3120 TTCGAACACG ATCAGCGCCG CGGCGGTCTT GTGCCGGCGC AAAGTGGTCA GGATCGGACG 3180 GATGTCCATG CGGGCCTCAT TGGCTCTTGA GCTGGATGGC GGGCGTCACC TGGCAGGCGC 3240 GCCAGGCCGG CAACAGGCCG GCCAGCACGC TGGCGGCGAC GGCCAGGACG AAGGTGGTGG 3300 CGAGCATGGC CGGGTCCAGC CGCGCCAGCG CGGCGTAGCC GACCGATTGC TGACGCACCG 3360 CCCACAGGCC CAGCTGGGCC AGCACCAGGC CAAGCACGCC GCCGGCCAGG CCGACGCTGC 3420 CGGCTTCGAC CAGGCATTGG GCGAAGATCG CGCGCCGGGT CGCGCCGAGC GCGCGGCGCA 3480 CGCCGATCTC GCCGGAGCGG CGCAGGAACT TGGCCAGCAG CAGGCCCACC GTATTGAGCA 3540 GGCACACCGC CAGGAAGCCG AACGCCAGCC ACATCTGCAG GCGCACGTCG GCCGGCACCA 3600 CGCGCTTGTA GTCCAGCCAT TGCATCAGGC CGTCGAGCTT GGGCGCGGTC GGCCGCACAT 3660 ACACGCCGGC GGCGCGCTGC TGGGCGACGT AGTTGTCCAG GTACTGGCGA TAGGCGGCGA 3720 CCTTCTGCGG CGAATTCAGT TCCACCCAGT ACTGCGCCCA GATGCATTTG GCGGCCACCG 3780 AGTAGTTGCC CTCCGGCAGG TCGGCGCTGT CGCCCCAGCA GCTGATGTTG CCTTGCGCGC 3840 CCATGCGCAG GTCGCGTGCG GTGCTGAACG GCACGAACAA TTCTTCGGCT TCGCCGAAGC 3900 CGCGCTCCAC GGTGAGGTCG TAGAAGTTCG GCTGCGGATG CCAGGCATCG ATCACCCCGA 3960 CCACGCGCAG TTCGTGGTTG TTGACCCAGA CCGACTTGCC CACGCTGTTG CCGCCGCCGA 4020 ACAAACGCTC GTTGAGCTTC TTGCCGATCA CCGCCACGCG CGCGCGGCCT TCGTCTTCCT 4080 TGCCGCTCCA CGCCGCGCCG TACTGGAACG GCACCTGGAA CATCGGGAAG AAATCGGCCG 4140 AGGTGTAGCG CGAGTTCTGG CGGAACGCCG GCAGGTTGTC GCGGCGCGGT TCGATCGCCA 4200 CGTTGCCGCT GGTCATCAGC GCCTGGCGGT CGGCGCGCGC CTCGCGCAGC AGGGCCTCGC 4260 CGTCGAAGCG CGAGATGTTG TCCGGCGGCT CGGAGCCGGG GATGTAGCCG GTCATCGAGC 4320 GCGGATCCAG GCGCGGCTGG AACAGGTTCT GGCTGTGCCC GGGCATCGGA TCGCCGGAAA 4380 GCACGTAGAA CACGGTCAGG GTGGTCATCG CCGCGCCGAT GCCGAGCGCG ATGGCGAGCA 4440 CCATCAGCGC GGTCAGCACC TTGTTGCGCT TGAAGCTGCG CGCGGCGAGC TGCAGGTAAT 4500 AGGCGAACTG GCTGTTGCCG GACATGGGCG CGGCCTCAGG CGGTGGCGGC GTCGGCCGCG 4560 GTCGACACGG CGGGGGTCGA GGCGCTGACC AGGCTCGGTT CGGCGCGCAG GTCGGTGGCC 4620 ATGCCGTCGA CGATGTGCAC GTTGCGCTGC GCGCGCGCGG CCAGTTCCGG GTCGTGGGTG 4680 ACCATGACGA TGGTGGTGCC CTGGGCGTTG ATCTCCTCCA GCAGCTCCAT CACGCCGCGC 4740 GCCATCTGCG AATCCAGGTT GCCGGTGGGT TCGTCGGCCA GCAGCAGGCG CGGCGAGCCG 4800 GCCAGCGCGC GCGCGATCGC CGCGCGCTGC TGCTGGCCGC CGGACAGCTC GGTGGGGTAG 4860 TGGCGCATGC GCGAGCCCAG CCCGACCTGG GTCAGCGCCT GCTCGATGCG CTGGCGACGC 4920 TCGGCCGCGG GCATGCGCCG GTAGCGCAGC GGCACGTCGC AGTTGTCGAA CAGGTTGAGG 4980 TCGGGAATCA GGTTGAAGCT TTGGAAGATG AAGCCGATCT TCTGGTTGCG CAGGCGCGAG 5040 CGGGCGTCGT CGGACAGGTC GCGCACGTCC TCGCCGTCGA GCTTGTACTC GCCGCCGGTG 5100 AAGGTCTCCA GCAGGCCGGC GATGTTGAGG AAGGTGGTCT TGCCCGAACC CGAAGGCCCG 5160 GTCACGGCGA CGAACTCGCC GTCGCGCACG TGCA 5194 // ID Contig1124 standard; DNA; UNC; 3627 BP. XX DE Contig1124.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..3627 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene complement(243..986) FT /locus_tag="DeVSDRAFT_0046" FT /colour=11 FT CDS complement(243..986) FT /locus_tag="DeVSDRAFT_0046" FT /product="ABC transporter permease" FT /note="SPTR: Q8PGH8 ABC transporter permease. Xanthomonas axonopodis pv. citri." FT /note="KEGG: xac:XAC3638 ABC transporter permease " FT /note="COGs: COG1566 Multidrug resistance efflux pump category=V" FT /note="InterPro IPR006162" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT VAKVDVAKAEDELKKADIGLSHAREGIGRQDRSASLDARNKRLLAQRQRAIVAEAQRQVDALTLRAPFDGQVGQVQVAQR FT ANVAINDPVLSVVDLGVFELEIKVPESFARDLAIGIPAQIAGNDGRTYAAKISAVSPEVVTGEVASRLRFDGAQPPALRQ FT NQRLSARIVLDTRRNALIVERGPFLEQDGGHSAYVVSGGVAARRVIRTGASSLSQVEILEGLQPGERIVVSGADQFANAE FT TVRISGE* FT " FT gene 1710..3542 FT /locus_tag="DeVSDRAFT_0047" FT /colour=9 FT CDS 1710..3542 FT /locus_tag="DeVSDRAFT_0047" FT /product="glucosamine--fructose-6-phosphate aminotransferase, isomerizing" FT /note="TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing" FT /note="PFAM: glutamine amidotransferase, class-II; sugar isomerase (SIS)" FT /note="SPTR: Q3BP28 Glutamine-fructose-6-phosphate transaminase (Isomerizing) (EC 2.6.1.16). Xanthomonas campestris pv. vesicatoria (strain 85-10)." FT /note="KEGG: xcv:XCV3754 D-fructose-6-phosphate amidotransferase " FT /note="COGs: COG0449 Glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains category=M" FT /note="InterPro IPR000583:IPR001347:IPR005855" FT /codon_start=1 FT /transl_table=11 FT /colour=9 FT /translation=" FT MCGIVGAIADRDVVPVLIDGLKRLEYRGYDSAGIAVFDGAQLRRVRRTGRVAEMEAAAQSESFSAQIGIGHTRWATHGGV FT TEANAHPHISFGELAVVHNGIIENHDEQRERLRAAGYAFESQTDTEVIAHLIHSYLKQGHDLLAAVQAAVRELVGAYAIA FT VVSLNEPGRLIAARMGCPLLVGLGEGENFVASDVSAIVQATRRVIFLEEGDTAEVTRAAVRVFDIDGAQIEREVHLSDVS FT LASLELGPYRHFMQKEIHEQPRAIADTIEAVIDNNGFSASLFGAKADEVFAGVEGVQILACGTSYYAGLTARYWIEAIAG FT LPCQVEIASEYRYRAAVANPKQLIVTISQSGETLDTMEALKYAKSLGHDKTLSICNVPESAIPRASKLVYYTRAGAEIGV FT ASTKAFTTQLVALFTLTATLAKLRGALSDEQEAEYLDALRHLPGSVQHALNLEPQVTAWAERFAPKHHALFLGRGVHYPI FT ALEGALKLKEISYIHAEAYPAGELKHGPLALVDAAMPVVVIAPNDKLLEKVKSNIQEVRARGGEMFVFADLDSHFGESEQ FT VHVIRTPRHVGVLSPVVHAIPVQLLAYHAALARGTDVDKPRNLAKAVTVE* FT " SQ Sequence 3627 BP; 557 A; 1186 C; 1319 G; 564 T; 1 other; GACGCGTGCG CCACGCGGCG TCGCCTCAGC GCACCGAGAA CAGCGGCAGC GCGATCGCGC 60 TGGCGAAGCG CGGGCGCGTC GAGCGCTTCG GCGCGGCGGC GTTGGCGCTG ACCGCACGCT 120 CGCCGTCGTG GTTGAAGTCG ATCAGCTGGT GCAGGCGCAG CGGCACCGCG TCGGTCAGTT 180 CCTGGGCGTT CCAGTGCGGG GCGAAGTCGT AGGCGTTGGC GGCGTTGAAG GCGTTCATGG 240 GTTCATTCTC CGGAGATGCG GACGGTTTCG GCGTTGGCGA ACTGGTCGGC GCCGGAGACG 300 ACGATGCGTT CTCCCGGCTG CAGACCTTCG AGGATTTCCA CTTGGCTCAA GCTGCTGGCG 360 CCGGTGCGGA TGACGCGGCG GGCGGCGACG CCGCCGGACA CGACGTAGGC GCTGTGGCCG 420 CCGTCTTGTT CCAGGAACGG CCCGCGCTCG ACGATCAGCG CGTTGCGGCG GGTGTCGAGC 480 ACGATGCGTG CGCTCAGGCG CTGGTTCTGG CGCAGCGCCG GCGGCTGCGC GCCGTCGAAG 540 CGCAGGCGGC TGGCGACTTC GCCGGTCACC ACTTCCGGCG ACACCGCCGA GATCTTGGCC 600 GCGTAGGTGC GGCCGTCGTT GCCGGCGATC TGCGCCGGAA TGCCGATGGC CAGATCGCGG 660 GCGAAGCTTT CCGGCACCTT GATCTCGAGT TCGAACACGC CCAGGTCGAC CACGCTGAGC 720 ACCGGGTCGT TGATGGCGAC GTTGGCGCGC TGGGCGACCT GGACCTGGCC GACCTGGCCG 780 TCGAACGGCG CGCGCAAGGT CAGCGCATCG ACCTGGCGCT GGGCCTCGGC GACGATTGCG 840 CGCTGGCGCT GCGCCAGCAA ACGCTTGTTG CGCGCGTCCA GCGAAGCGCT GCGGTCCTGG 900 CGGCCGATGC CTTCGCGGGC GTGGGACAGG CCGATGTCGG CCTTCTTCAA TTCGTCTTCG 960 GCCTTGGCCA CGTCGACCTT GGCCACCGCG CCGCCAGCGA AGGCGCGGTT GTAGCGCTCC 1020 AGATCGCGTT CGGCGGCGGT GCGGTCGATG CGGGCCTGGT CGAGTTCCTT GCGCGCGGTG 1080 GAACGCGCCA GCTCGCCGTC GAGTTCGGCG CGGGTGGCCT CGGCTTCCAG GCCGGCCAGA 1140 ATGGATTGTC CTGGGGCCGT TTGCTGCGCA GCTCGGGCTG TCGATCTCGG CCAGCACCTG 1200 GCCCTTGCGC ACCGCGTCGC CGGCGACGAC CTTGAGCTCG ACCGAACCGC CGGGGATGGC 1260 GTACAGCACC GGGCTGTTGG CGGCGATCAC GCGGCCGTCG NCGGCGATGT CGCGGACCAG 1320 ATCGCCGCGC TTCACTTCAG CGATGCGCAG GCGCTGCGCC GACACCGAGG TGCCGCCCGC 1380 GGCCCAGCCG GAGGCGACCC AGGCGCCAGC GCCGAGCACC ACCGCGCCGA CTGCGGCCGC 1440 CAGTGCCCAT TGCCGGCGGC GCCGGCCCTG CTGGGCGGCG GGGGCGAGGC GTTGGTCCTG 1500 GGCGGAGGTG TCGCGGATGC TCATCGGGGC GCTCGGTCGG GGTCTCTGCC CAAATACCAA 1560 GCACATCCCG TGCCAACTCC AACTTATTGA TTCATAAGGG TGGCGATGCC TGTCCGGGCG 1620 TCCGTCCGTC CGGACACCGC GTCCGCGCGG ACACCGCCAC GACCGCCGCC CCGCTAGAAT 1680 GCGGTCACAT TTTCACGGAT GCCTCCAGCA TGTGCGGAAT CGTAGGCGCG ATCGCCGATC 1740 GCGATGTGGT GCCGGTCCTG ATCGACGGCT TGAAGCGGTT GGAATACCGC GGTTACGACT 1800 CGGCGGGCAT CGCCGTGTTC GACGGCGCGC AACTGCGCCG GGTGCGCCGG ACCGGGCGCG 1860 TGGCGGAGAT GGAGGCGGCG GCGCAGTCCG AATCGTTCAG CGCGCAGATC GGCATCGGCC 1920 ACACCCGCTG GGCGACCCAC GGCGGAGTGA CGGAGGCCAA TGCGCACCCG CACATCAGCT 1980 TCGGCGAACT GGCGGTGGTG CATAACGGCA TCATCGAAAA CCACGACGAA CAGCGCGAGC 2040 GGTTGCGCGC GGCCGGTTAT GCGTTCGAAT CGCAGACCGA CACCGAAGTC ATCGCCCACC 2100 TCATTCATTC GTATCTGAAG CAGGGCCACG ACCTGCTCGC GGCGGTGCAG GCGGCGGTGC 2160 GCGAGCTGGT CGGCGCCTAC GCGATCGCGG TGGTGAGCCT CAACGAGCCG GGCCGGCTGA 2220 TCGCCGCGCG CATGGGCTGC CCGCTGCTGG TCGGCCTGGG CGAGGGCGAG AACTTCGTCG 2280 CCAGCGACGT GTCGGCGATC GTGCAGGCCA CGCGCCGGGT GATCTTCCTG GAAGAAGGCG 2340 ACACCGCCGA AGTCACCCGC GCCGCAGTGC GGGTGTTCGA CATCGACGGC GCGCAGATCG 2400 AGCGCGAAGT GCATCTGTCG GACGTGTCGC TGGCCTCGCT GGAGCTGGGC CCGTACCGCC 2460 ACTTCATGCA GAAGGAAATC CACGAGCAGC CGCGCGCGAT CGCCGACACT ATCGAAGCGG 2520 TGATCGACAA CAACGGCTTC AGCGCCTCGC TGTTCGGCGC CAAGGCCGAC GAGGTGTTCG 2580 CCGGCGTCGA GGGCGTGCAG ATCCTGGCCT GCGGCACCAG CTATTACGCG GGATTGACCG 2640 CGCGCTACTG GATCGAGGCC ATCGCCGGAT TGCCGTGCCA GGTCGAGATC GCCAGCGAGT 2700 ACCGCTATCG CGCCGCAGTG GCGAACCCGA AGCAGCTGAT CGTGACGATT TCGCAGTCCG 2760 GCGAAACCCT GGACACGATG GAAGCGCTGA AGTACGCCAA ATCGCTGGGC CACGACAAGA 2820 CCTTGTCGAT CTGCAACGTG CCCGAGAGCG CGATCCCGCG CGCGAGCAAG CTGGTGTACT 2880 ACACCCGCGC CGGCGCCGAG ATCGGCGTGG CCTCGACCAA GGCGTTCACG ACCCAGTTGG 2940 TGGCGCTGTT CACCCTGACC GCGACCCTGG CCAAGCTGCG CGGCGCGCTC AGCGACGAGC 3000 AGGAGGCCGA ATACCTCGAC GCGCTGCGTC ATCTGCCGGG CAGCGTGCAG CACGCGCTGA 3060 ACCTGGAGCC GCAGGTGACG GCCTGGGCCG AGCGTTTCGC GCCCAAGCAC CACGCATTGT 3120 TCCTGGGCCG CGGCGTGCAT TACCCGATCG CGCTGGAAGG CGCGCTCAAG CTCAAGGAAA 3180 TCTCCTACAT CCACGCCGAG GCGTATCCGG CGGGCGAGCT CAAGCACGGC CCGCTGGCGC 3240 TGGTGGACGC GGCGATGCCG GTGGTGGTGA TCGCGCCGAA CGACAAGCTG CTGGAGAAGG 3300 TGAAGTCGAA CATCCAGGAA GTGCGCGCGC GCGGCGGCGA GATGTTCGTG TTCGCCGACC 3360 TGGACAGCCA CTTCGGCGAA TCCGAGCAGG TGCACGTGAT CCGCACCCCG CGCCACGTCG 3420 GCGTGCTGTC GCCGGTGGTG CATGCGATTC CGGTGCAGTT GCTGGCGTAT CACGCGGCGC 3480 TGGCGCGCGG GACGGATGTG GATAAGCCGC GGAATCTGGC GAAAGCGGTG ACGGTGGAAT 3540 AAACCGTGGC GGCGGAACCG GATGAGCCGG TTCCGACGGA TCCGACGAGT GTCGCAAGGA 3600 CGAAGGGCGA GAGGATCGCC GGGGGCG 3627 // ID Contig1129 standard; DNA; UNC; 3356 BP. XX DE Contig1129.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..3356 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene 1..2547 FT /locus_tag="DeVSDRAFT_0048" FT /colour=10 FT CDS 1..2547 FT /locus_tag="DeVSDRAFT_0048" FT /product="Glutamate synthase (ferredoxin)" FT /EC_number="1.4.7.1" FT /note="PRIAM: Glutamate synthase (ferredoxin)" FT /note="PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase" FT /note="SPTR: Q8PEE8 Glutamate synthase, alpha subunit. Xanthomonas campestris pv. campestris." FT /note="KEGG: xcb:XC_0032 glutamate synthase, alpha subunit " FT /note="COGs: COG0069 Glutamate synthase domain 2 category=E" FT /note="InterPro IPR002932:IPR006982" FT /codon_start=1 FT /transl_table=11 FT /colour=10 FT /translation=" FT IDRVNRARAPYKRWLKQGMTYLHSELIDPNLAAEPFDHETLAGFQKLFQLTREEREQVLRPLAEIEQEATGSMGDDVPMA FT VLSQQVRPLYDHFRQAFAQVTNPPIDPLREDCVMSLATQIGREGNVFVDGPGNVGHIHLNSPVLAQRKLRQLLAMSPYDQ FT SHRYIDLNYTAEEGLKAALLRLCREAEDATRDGIVLLIVSDRRPRRDALMMHALLATGAIHQHLVRVGLRCEANLIIETG FT TARDPHHFACLIGFGATAVYPYLAYQTLHDLGARGILRTKHGEVAQIGRSYRRAIKKGLLKIISKMGIATIGSYRGAQLF FT EIIGLDKEVVELCFTGTPSRISGAGFELLQGDDETLADIAWNPNRLPEIGGLLKYTPGGEYHLFNPDVVTRLQRAVGSGE FT WSDWQHYAEAVNERPTAALRDLLELEADPARAIPLEDVESVEAIVRRFDSAAMSLGALSPEAHEALAIAMNRLGGRSNSG FT EGGEDPARYRSDKVSKIKQIASGRFGVTPEYLVNAEVLQIKVAQGAKPGEGGQLPGHKVNELIARLRYAMPGIGLISPPP FT HHDIYSIEDLAQLIHDLRQVNPEALISVKLVSHAGVGTIATGVAKAGADLITVSGHDGGTGASPLSSIRYAGTPWELGLA FT EARQALIGNDLRERVILQTDGGLKSGLDVVKAALLGAESFGFGTAPMIALGCKYLRICHLNTAPPAWPLRTTRCAATISP FT ACRNGSRTSSACSPRKCGIGWPRWACARSAKSSAAPTCCANATATARASIGSTCRRCWPAPAWPTVATAGCRRHRPNPKA FT WRCNSTPNWPRRSRTRPAASTATRSATPTAASARACPGASPEHTVTAA* FT " FT gene 2668..3207 FT /locus_tag="DeVSDRAFT_0049" FT /colour=10 FT CDS 2668..3207 FT /locus_tag="DeVSDRAFT_0049" FT /product="Glutamate synthase (NADPH)" FT /EC_number="1.4.1.13" FT /note="PRIAM: Glutamate synthase (NADPH)" FT /note="PFAM: glutamate synthase, alpha subunit domain protein" FT /note="SPTR: Q8PEE8 Glutamate synthase, alpha subunit. Xanthomonas campestris pv. campestris." FT /note="KEGG: xom:XOO_0157 glutamate synthase alpha subunit " FT /note="COGs: COG0070 Glutamate synthase domain 3 category=E" FT /note="InterPro IPR002489" FT /codon_start=1 FT /transl_table=11 FT /colour=10 FT /translation=" FT MDGGRIVLRTTAGARYAEHETPILGNTCLYGATGGELYAAGRAGERFGVRNSGATAVVEGAGDHCCEYMTGGVVAVLGRT FT GLNFGAGFTGGMAYVLDVERDFVDRYNHELIDILRISADGFEHHRSHLHDLLETHVALTGSAWARRILDEMRDYLGKFWL FT VKPKAASLESLAETLRSAA* FT " SQ Sequence 3356 BP; 566 A; 1194 C; 1119 G; 477 T; 0 other; ATCGACCGGG TCAACCGCGC GCGCGCGCCG TACAAGCGCT GGCTCAAGCA GGGCATGACC 60 TACCTGCACA GCGAATTGAT CGATCCGAAC CTGGCCGCGG AGCCGTTCGA CCACGAGACC 120 CTGGCCGGCT TCCAAAAGCT CTTTCAGCTC ACCCGCGAAG AGCGCGAGCA AGTGCTGCGC 180 CCGCTGGCCG AGATCGAACA GGAAGCCACC GGCTCGATGG GCGACGACGT GCCGATGGCG 240 GTGCTCTCGC AACAGGTGCG GCCGCTGTAC GACCACTTCC GCCAGGCCTT CGCCCAGGTC 300 ACCAATCCGC CGATCGACCC GCTGCGCGAG GACTGCGTGA TGTCGCTCGC GACCCAGATC 360 GGGCGCGAGG GCAACGTGTT CGTCGACGGG CCGGGCAACG TCGGCCACAT CCATCTCAAC 420 TCGCCGGTGC TGGCCCAGCG CAAGCTGCGC CAGTTGCTGG CGATGTCGCC CTACGACCAG 480 TCGCACCGCT ACATCGACCT CAACTACACC GCCGAGGAAG GGCTCAAGGC GGCGCTGCTG 540 CGGCTGTGCC GCGAGGCCGA GGACGCCACC CGCGACGGCA TCGTGCTGCT GATCGTCAGC 600 GACCGCCGCC CGCGCCGCGA CGCGCTGATG ATGCACGCGC TGCTGGCCAC CGGCGCGATC 660 CACCAGCATC TGGTCCGGGT TGGCCTGCGC TGCGAGGCCA ACCTCATCAT CGAAACCGGC 720 ACCGCGCGCG ATCCGCACCA CTTTGCCTGC TTGATCGGTT TCGGCGCGAC CGCGGTGTAT 780 CCGTATCTGG CGTATCAGAC CCTGCACGAC CTCGGCGCGC GCGGCATCCT GCGCACCAAG 840 CACGGCGAGG TCGCGCAGAT CGGCCGCAGC TATCGCCGCG CGATCAAGAA GGGCCTGCTG 900 AAGATCATCT CGAAGATGGG CATCGCCACC ATCGGCAGTT ATCGCGGCGC GCAGTTGTTC 960 GAGATCATCG GCCTGGACAA GGAAGTGGTC GAGCTGTGCT TCACCGGCAC GCCCTCGCGC 1020 ATCAGCGGTG CCGGCTTCGA GCTGTTGCAG GGCGATGACG AAACCCTGGC CGACATCGCC 1080 TGGAACCCGA ACCGGCTGCC GGAGATCGGC GGCCTGCTCA AGTACACGCC CGGCGGCGAA 1140 TACCATCTGT TCAATCCCGA CGTGGTCACC CGCCTGCAGC GCGCGGTCGG CAGCGGCGAG 1200 TGGAGCGACT GGCAGCATTA CGCCGAAGCG GTCAACGAGC GTCCGACCGC GGCGCTGCGC 1260 GACTTGCTGG AGCTCGAAGC CGATCCGGCG CGGGCGATAC CGCTGGAGGA CGTCGAATCG 1320 GTCGAAGCCA TCGTGCGCCG CTTCGATTCG GCGGCGATGA GCCTGGGCGC GCTGTCGCCG 1380 GAAGCGCACG AAGCGCTGGC GATCGCGATG AACCGGCTCG GCGGGCGCTC GAACTCGGGC 1440 GAAGGCGGCG AAGATCCGGC GCGTTATCGC AGCGACAAGG TGTCCAAGAT CAAGCAGATC 1500 GCCTCGGGCC GCTTCGGCGT CACCCCGGAG TATCTGGTCA ACGCCGAAGT GCTGCAGATC 1560 AAGGTCGCCC AGGGCGCCAA GCCCGGCGAA GGCGGTCAGT TGCCGGGGCA CAAGGTCAAC 1620 GAACTGATCG CGCGGCTGCG CTATGCGATG CCGGGCATCG GCCTGATATC GCCGCCGCCG 1680 CATCACGATA TCTATTCGAT CGAAGACTTG GCCCAGCTGA TTCACGATCT GCGCCAGGTC 1740 AACCCTGAGG CATTGATCTC GGTGAAATTG GTCTCGCACG CCGGCGTGGG CACCATCGCC 1800 ACCGGCGTGG CCAAGGCCGG CGCCGACCTG ATCACCGTGT CCGGCCACGA CGGCGGCACC 1860 GGCGCCAGCC CGCTGTCGTC GATCCGCTAC GCCGGCACGC CGTGGGAACT GGGCTTGGCC 1920 GAGGCGCGGC AAGCGCTGAT CGGCAACGAC CTGCGCGAAC GCGTGATCCT GCAGACCGAC 1980 GGCGGGCTCA AGAGCGGCCT GGACGTGGTC AAGGCGGCAT TGCTGGGCGC GGAGAGCTTC 2040 GGCTTCGGCA CCGCGCCGAT GATCGCGCTG GGCTGCAAGT ACCTGCGCAT CTGCCACCTC 2100 AACACTGCGC CACCGGCGTG GCCACTCAGG ACAACGCGCT GCGCCGCGAC CATTTCACCG 2160 GCCTGCCGGA ACGGGTCGAG AACTTCTTCC GCCTGCTCGC CGAGGAAGTG CGGCATTGGC 2220 TGGCCGCGCT GGGCGTGCGC ACGCTCGGCG AAATCGTCGG CCGCACCGAC CTGCTGCGCC 2280 AACGCGACGG CGACAGCGCG CGCCAGCATC GGCTCGACCT GTCGCCGCTG CTGGCCGGCT 2340 CCGGCCTGGC CCACGGTGGC CACTGCGGGA TGCCGGCGCC ACCGGCCGAA CCCGAAGGCC 2400 TGGCGCTGCA ACTCGACACC GAACTGGCCG CGGCGATCGC GCACAAGGCC GGCGGCGAGT 2460 ACAGCTACAA GATCCGCAAC ACCGACCGCA GCATCGGCGC GCGCCTGTCC GGGCGCATCG 2520 CCCGAGCACA CGGTGACCGC GGCATGAACG ACGCGCCGCT GACCCCTGCG CTTCCAGGGC 2580 ACCGACGGCC AGAGCTTCGG CGCGTACCAG GCCGGCGGCC TGCAGTTCGA GCTCACCGGC 2640 GAGGCCAACG ACTACGTCGG CAAGGGCATG GACGGCGGCC GCATCGTGCT GCGTACGACC 2700 GCAGGCGCGC GCTACGCCGA GCACGAGACG CCGATCCTCG GCAACACCTG CCTGTACGGC 2760 GCCACCGGCG GCGAGCTCTA CGCCGCCGGC CGCGCCGGCG AGCGCTTCGG CGTGCGCAAC 2820 TCCGGCGCGA CCGCGGTGGT GGAAGGCGCC GGCGATCACT GCTGCGAGTA CATGACCGGC 2880 GGCGTGGTCG CGGTGCTCGG CCGCACCGGC CTGAACTTCG GCGCCGGCTT CACCGGCGGC 2940 ATGGCCTATG TGCTCGATGT CGAGCGCGAT TTCGTCGACC GCTACAACCA CGAGCTGATC 3000 GACATCCTGC GCATCTCCGC CGACGGTTTC GAGCACCACC GCTCGCACCT GCACGACCTG 3060 CTGGAAACCC ACGTGGCGTT GACCGGCAGC GCCTGGGCGC GGCGCATCCT CGACGAGATG 3120 CGCGATTACC TGGGCAAGTT CTGGCTGGTC AAGCCCAAGG CGGCGAGCCT GGAATCGCTG 3180 GCCGAAACCC TGCGGAGCGC GGCGTGATGG CGCGCGCGGC CGCACTCACC CGTCCCGCGT 3240 CGGCGACGCG GGCGACGCTC ACCTGGAAGG CGACGACGAT GAACCGAATT TCGCGCAATC 3300 ACGGCCTTGG CATTTCCCCG GTAAAACCGG CCGCCGCCGC GCATTCGTCC CTCGCC 3356 // ID Contig1140 standard; DNA; UNC; 2022 BP. XX DE Contig1140.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..2022 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene complement(190..2022) FT /locus_tag="DeVSDRAFT_0050" FT /colour=9 FT CDS complement(190..2022) FT /locus_tag="DeVSDRAFT_0050" FT /product="heat shock protein HslVU, ATPase subunit HslU" FT /note="TIGRFAM: heat shock protein HslVU, ATPase subunit HslU" FT /note="PFAM: AAA ATPase, central domain protein; ATPase AAA-2 domain protein" FT /note="SMART: AAA ATPase" FT /note="SPTR: Q8PPP7 ATP-dependent hsl protease ATP-binding subunit hslU. Xanthomonas axonopodis pv. citri." FT /note="KEGG: xac:XAC0638 ATP-dependent HslUV protease ATP-binding subunit HslU " FT /note="COGs: COG1220 ATP-dependent protease HslVU (ClpYQ) ATPase subunit category=O" FT /note="InterPro IPR003593:IPR003959:IPR004491:IPR013093" FT /codon_start=1 FT /transl_table=11 FT /colour=9 FT /translation=" FT WAATARYWPVSPRPPPMRHPVRTVRSQARKARPADPRRGRTGQGLAHRAPPGQARSAARRRRPRNVLGHQRHRRCDRARR FT RHRRHRLRRHVRVVGRARADGAQHPRRPRHRHRVDQHRRRCVHLYESQRGGGRAVRNSAATRTHSPYLTADFMKPDNSHA FT TMTPREIVQELDRHIVGQHSAKRAVAIALRNRWRRMQLPAELRNEVMPKNILMIGPTGVGKTEIARRLATLANAPFVKVE FT ATRFTEVGYVGKDVEQIVRDLADTAVKLYREQAKIRVRTQAEERAEDRILDALLPKRVPGGFGFGSETPAADHSAPDSDT FT RAKLRKQLRSGELDDREIEIETAVNLGGVDIMAPPGMEEMGQQLRQMFSQVSGGKTHKKHLSIKAARPQLIEEEAAKLVN FT EDDVRQAAIEACEQHGIVFIDEIDKVAKRSEAGMSGGDVSREGVQRDLLPLVEGSTVSTKYGAVKTDHILFIASGAFHLA FT KPSDLIPELQGRFPIRVELGALSKDDFVRILTEPKAALTTQYVELLRTEGVTLEFTTDAVDRLAEIAAQVNERQENIGAR FT RLHTVLERLLDTLSYEAPDRDGQAVTIDKAYVDQHLGELVQDPDLSRYIL* FT " SQ Sequence 2022 BP; 301 A; 661 C; 671 G; 389 T; 0 other; GGGCGACACG GTAGCAGAGC GCGGCGAGGG CGAGGACTGT CAATAAACAG CGCCTTGCGA 60 TGCTGCCCTC ACCCTAGCCC TCTCCCGTAA GCGGTAGAGG GAACGGTTGC GTCGTCTCTG 120 CACCCCTCGC GCGCAAAGCC CCTCTCCCGC TTGCGGGAGA GGGGTTGGGG TGAGGGCCGC 180 CTTACAACAT CAAAGAATGT ACCGACTCAA ATCCGGATCC TGCACCAGTT CGCCCAAATG 240 CTGATCCACA TACGCCTTGT CGATCGTCAC CGCCTGCCCA TCGCGATCCG GCGCCTCGTA 300 GCTCAAGGTA TCGAGCAACC GCTCCAGCAC CGTATGCAGA CGCCGAGCGC CGATGTTCTC 360 CTGCCGCTCG TTGACCTGCG CGGCGATCTC GGCCAAACGA TCCACCGCAT CGGTGGTGAA 420 CTCCAATGTC ACCCCTTCGG TGCGCAGCAG TTCGACGTAC TGCGTGGTCA GCGCCGCCTT 480 CGGCTCGGTC AGGATGCGCA CGAAGTCGTC CTTGCTCAGC GCGCCCAGTT CCACCCGGAT 540 CGGGAAGCGG CCTTGCAGCT CCGGAATCAG GTCGCTGGGC TTGGCCAGAT GGAACGCGCC 600 GGAGGCGATG AACAGGATGT GGTCGGTCTT GACCGCGCCG TACTTGGTGC TGACGGTCGA 660 GCCTTCGACC AGCGGCAGCA GGTCGCGCTG CACGCCTTCG CGGCTGACGT CGCCGCCGCT 720 CATGCCGGCT TCGCTGCGCT TGGCGACCTT GTCGATCTCG TCGATGAAGA CGATGCCGTG 780 CTGCTCGCAG GCCTCGATCG CGGCCTGGCG CACGTCGTCT TCGTTGACCA ACTTCGCCGC 840 TTCCTCTTCG ATCAGCTGCG GACGCGCGGC CTTGATCGAC AGGTGCTTCT TGTGGGTCTT 900 GCCGCCGGAC ACCTGCGAGA ACATCTGCCG CAGCTGCTGG CCCATCTCTT CCATGCCGGG 960 CGGCGCCATG ATGTCGACGC CGCCGAGGTT GACCGCGGTT TCGATCTCGA TCTCGCGATC 1020 GTCCAGCTCG CCGCTGCGCA GCTGCTTGCG CAGCTTGGCG CGGGTGTCGC TGTCGGGCGC 1080 ACTGTGGTCG GCGGCCGGGG TTTCCGAGCC GAAGCCGAAA CCGCCGGGCA CGCGCTTGGG 1140 CAGCAGCGCG TCGAGGATGC GGTCTTCGGC GCGTTCCTCG GCCTGGGTTC GCACGCGGAT 1200 CTTGGCTTGC TCGCGATACA ACTTGACCGC GGTGTCGGCC AGGTCGCGCA CGATCTGCTC 1260 GACGTCCTTG CCGACGTAGC CGACCTCGGT GAAACGCGTG GCCTCGACCT TGACGAACGG 1320 CGCGTTGGCC AGCGTCGCCA GGCGCCGCGC GATCTCGGTC TTGCCGACGC CGGTGGGGCC 1380 GATCATCAGG ATGTTCTTGG GCATCACCTC ATTGCGCAAT TCGGCGGGCA GCTGCATGCG 1440 GCGCCAGCGG TTGCGCAGGG CGATGGCGAC CGCGCGCTTG GCCGAATGCT GGCCGACGAT 1500 GTGTCGGTCC AGTTCCTGCA CGATCTCGCG CGGAGTCATG GTGGCGTGGC TGTTGTCGGG 1560 CTTCATAAAG TCGGCAGTCA AATAAGGGGA GTGAGTGCGA GTGGCTGCGC TGTTTCTTAC 1620 AGCTCTTCCA CCACCACGTT GCGATTCGTA TAGATGCACA CATCGCCGGC GATGTTGATC 1680 GACTCGGTGG CGATGGCGCG GGCGTCGAGG GTGCTGTGCG CCATCAGCGC GCGCGCGGCC 1740 GACAACGCGT ACATGCCGCC GGAGCCGATG GCGACGATGC CGTCTTCGGG CTCGATCACA 1800 TCGCCGGTGC CGCTGATGAC CAAGGACGTT TCGCGGTCGG CGACGGCGAG CAGCGCTTCG 1860 AGCTTGCCCA GGCGGCGCTC GGTGCGCCAA TCCTTGGCCA GTTCGACCGC GGCGCGGGTC 1920 AGCTGGCCGT GCTTTTCGAG CTTGGCTTCG AACAGTTCGA ACAGGGTGAC GCATCGGCGG 1980 CGGGCGCGGC GAAACCGGCC AATACCTGGC CGTCGCGGCC CA 2022 // ID Contig1175 standard; DNA; UNC; 3978 BP. XX DE Contig1175.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..3978 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene 609..1523 FT /locus_tag="DeVSDRAFT_0053" FT /colour=13 FT CDS 609..1523 FT /locus_tag="DeVSDRAFT_0053" FT /product="conserved hypothetical protein" FT /note="SPTR: Q8PQV9 Hypothetical protein XAC0212. Xanthomonas axonopodis pv. citri." FT /note="KEGG: xac:XAC0212 hypothetical protein " FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MTPESPS-RGPTGPLHVLGALALELKGDAAVERSALARQDAGALSEKIARDLAGFADDTAALDLVTVGAHYDPVELLRSG FT WPLHRELDELAVRAPCERGAEQAGRVIAFGAQTNSCPERLIPRPIPRGPGAVVPFALSGSPELVARVGEILESSLLERGM FT AGADTALAAQEAFGLKVEHARYLTVHDLTAMMAMQYDHAGLGPLWPLLETALLQPEGEEWLDAVPEPLVHYADGEARIAL FT FSPAAWHARYAPEAPCDTAECRDKLNRRYQHFEARLRQISAVLGAHGVPVTFVHCDGPGDSAGL* FT " FT gene complement(1536..2564) FT /locus_tag="DeVSDRAFT_0054" FT /colour=13 FT CDS complement(1536..2564) FT /locus_tag="DeVSDRAFT_0054" FT /product="hypothetical protein" FT /note="SPTR: Q8ZNV5 Putative cytoplasmic protein. Salmonella typhimurium." FT /note="KEGG: stm:STM1896 putative cytoplasmic protein " FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT VLRGGCGARARAGPAGPRAGADRSRRARCRFSRRTGRAGTGWIGSHDFGRIDALHARYLAQAERSSSGEWKSALLADALM FT QALSEPEGDVLGPDWSRVEAITLGWARTHRESALARTLHARAIRAHAESATAYDDRGFYRVRSQRQPERDALLRRAMDYL FT QREQRVASRDPEYAVLLMSTAADLGDYARAETVFEQAMSDQPDYFPIYSSMLGLLREGPETQAVERYARRVLSRHEATIG FT RELYARLYSDYAQDLAFGPDHLFAGTQAKWVDMRAGFEDRIRRYPSQDNLQTYARFACIAGDPSALRDLWPRLQAPLWRL FT WQTRQRFEACGQLAAELQRVTF* FT " FT gene complement(2640..3185) FT /locus_tag="DeVSDRAFT_0055" FT /colour=11 FT CDS complement(2640..3185) FT /locus_tag="DeVSDRAFT_0055" FT /product="GCN5-related N-acetyltransferase" FT /note="PFAM: GCN5-related N-acetyltransferase" FT /note="SPTR: Q2RYU1 Acetyltransferase, possible. Salinibacter ruber (strain DSM 13855)." FT /note="KEGG: sru:SRU_2798 acetyltransferase, possible " FT /note="COGs: COG0456 Acetyltransferases category=R" FT /note="InterPro IPR000182" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT VRAWLAASSRPAANARLRRHDPPAHPRRRARRLRPDCAVDDRDGLGNRAQAPGPATVHAGVAAGLGDPAKARYFVAMREA FT DTAGRETIAVPAGTLMLTREWSDWRNGEWWWIQSVYVDPEHRRQGVYDALHRHVDALAQASAGVIGLRLYVERANTPAQK FT TYTAQGMSDAGYCIFEAELPG* FT " FT gene complement(3145..3720) FT /locus_tag="DeVSDRAFT_0056" FT /colour=9 FT CDS complement(3145..3720) FT /locus_tag="DeVSDRAFT_0056" FT /product="superoxide dismutase, copper/zinc binding" FT /note="PFAM: superoxide dismutase, copper/zinc binding" FT /note="SPTR: Q3BZ89 Superoxide dismutase precursor (EC 1.15.1.1). Xanthomonas campestris pv. vesicatoria (strain 85-10)." FT /note="KEGG: xcv:XCV0193 superoxide dismutase " FT /note="COGs: COG2032 Cu/Zn superoxide dismutase category=P" FT /note="InterPro IPR000437:IPR001424" FT /codon_start=1 FT /transl_table=11 FT /colour=9 FT /translation=" FT MSATLRIAVLAAATAALAACGGQTVKPTPPPAASAKPVSTASSATVVLASASGSLVSGKLTVRPMGDGVHLTGEIGGLTP FT NSTHAIHIHEKGDCSAADATSAGGHFNPAAQPHGQVDHGAHHAGDMDNLVANAEGVAKVDAHASGVTLGGGAPNDVAGRA FT VIVHASPDDYKSQPTGNAGARLACGVIKTGR* FT " FT sig_peptide complement(3613..3720) FT /colour=11 FT /locus_tag="DeVSDRAFT_0056" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 1.000) with cleavage site probability 0.542 at FT residue 36" SQ Sequence 3978 BP; 550 A; 1377 C; 1441 G; 609 T; 1 other; TTGAGCTCGC GCAGGTGGAA GCCCTTGAAC GCGGCGATCT TGTCCTTGGT GGTCTTGGCC 60 CGCGCGGCCT GCAACAGGCG CCGGCGCAGG CTGCGGCCGT AGACGATCGG CACGTCGGAG 120 GTGGTGTCCG AACCGCCGCC GATGCCGGCT TCGATCTGCC CGGTGGCGAT CTTGTTGGCG 180 ATGGTGATGA TCGAATCCAG CGAGGTGCCG CAGGCGCGCT GCAGGGTGAT GCCCGGGGTC 240 AGCGGCGACA GCCCGGAGGA CAGCGCGGCT TCGCGGCCGA GGTTCCAGTC GCTGCTGTGC 300 TTGATCACCG CGCCCATCGC CACTTCGCCG AGCTGCTGGC CGTGCAGGCC GAACTTCTCG 360 ACCAGCGCGC CGAGCGTGCG CACCGACATC CCCAGGTTGC CGACGTCCGC ATAGGCGGTG 420 TTCTGCCGGC AGAACGGGAT TCGCACGCCA CCGAGCACGG CGACGGGACG GTTTTGACGC 480 ATCGGCAGCA CCTCTGAAGA AGCGGTTTCT GGGAACTCGC GCAGGCCCGT GGGGCAGAGC 540 GGGCATAATG TGGCCCAGTG TAGCGCCGCC AGCGCGCTCT ACCAAACGCC AGCGTATCCT 600 CGGTGACCAT GACCCCCGAA AGCCCTTCCG NCCGCGGCCC GACCGGGCCC CTGCACGTCC 660 TTGGCGCACT CGCCCTGGAG CTCAAGGGCG ACGCCGCCGT GGAACGCAGC GCCCTCGCCC 720 GACAGGACGC CGGCGCCTTG TCGGAGAAGA TCGCCCGCGA CCTGGCCGGC TTCGCCGACG 780 ACACCGCGGC GCTGGACCTG GTCACCGTCG GAGCCCATTA CGACCCGGTC GAACTGCTGC 840 GTTCGGGCTG GCCGCTGCAC CGTGAACTCG ACGAGCTCGC CGTACGCGCG CCGTGCGAAC 900 GCGGCGCCGA GCAGGCCGGC CGGGTCATTG CCTTCGGCGC CCAGACGAAC AGTTGCCCGG 960 AGCGCTTGAT CCCTCGCCCG ATTCCGCGGG GGCCCGGTGC GGTTGTGCCG TTCGCGCTGA 1020 GCGGCTCGCC CGAACTGGTC GCCCGGGTCG GCGAGATCCT CGAATCCAGC CTGCTCGAAC 1080 GCGGCATGGC CGGCGCCGAC ACCGCCCTGG CCGCGCAGGA GGCGTTCGGC CTCAAGGTCG 1140 AGCACGCCCG CTACCTCACC GTGCACGACC TGACCGCGAT GATGGCCATG CAGTACGACC 1200 ACGCCGGCCT GGGCCCGCTA TGGCCGCTGC TCGAGACCGC GCTGCTGCAG CCCGAAGGCG 1260 AGGAATGGCT CGACGCCGTA CCCGAACCGC TGGTGCACTA CGCCGACGGC GAAGCCCGCA 1320 TCGCCCTGTT CTCGCCGGCC GCCTGGCACG CGCGCTACGC GCCCGAAGCC CCGTGCGACA 1380 CCGCCGAATG CCGCGACAAG CTCAACCGCC GCTACCAGCA CTTCGAAGCG CGGCTGCGGC 1440 AGATCTCGGC GGTGCTCGGC GCGCATGGGG TGCCGGTGAC GTTCGTGCAT TGCGACGGCC 1500 CCGGCGACAG CGCCGGGTTG TGAGCGCCAG CCGGGTCAGA ACGTAACCCG CTGCAGTTCC 1560 GCCGCCAATT GGCCGCAGGC TTCGAAACGC TGCCTGGTTT GCCATAACCG CCACAAGGGC 1620 GCTTGCAGGC GCGGCCACAG GTCGCGCAGG GCGCTCGGAT CGCCGGCGAT GCAGGCGAAA 1680 CGGGCATAGG TTTGCAGGTT GTCCTGGCTG GGATAGCGCC GGATCCGGTC TTCGAAGCCG 1740 GCGCGCATGT CGACCCACTT GGCCTGCGTG CCGGCGAACA GGTGGTCCGG CCCGAACGCC 1800 AGATCCTGGG CGTAATCCGA GTACAGGCGG GCGTACAGCT CGCGGCCGAT CGTCGCCTCG 1860 TGGCGCGACA GGACCCGGCG CGCGTAACGC TCGACCGCCT GCGTCTCGGG CCCCTCGCGC 1920 AGAAGGCCGA GCATGCTCGA ATAGATCGGG AAATAGTCGG GCTGATCCGA CATCGCCTGC 1980 TCGAATACCG TCTCGGCGCG CGCGTAGTCG CCCAGGTCCG CAGCGGTCGA CATCAGCAGC 2040 ACCGCATACT CGGGATCGCG CGAGGCGACG CGCTGCTCGC GTTGCAGGTA ATCCATCGCG 2100 CGCCGCAGCA GCGCGTCGCG CTCGGGCTGG CGCTGCGAGC GGACTCGGTA GAACCCGCGA 2160 TCGTCGTAGG CGGTGGCGCT TTCGGCATGC GCGCGGATCG CGCGCGCGTG CAGCGTTCGC 2220 GCCAACGCCG ACTCCCGATG CGTCCGCGCC CAGCCCAGCG TGATCGCCTC CACCCGGCTC 2280 CAGTCCGGTC CCAGCACGTC GCCTTCCGGT TCGCTCAGCG CTTGCATCAG CGCATCGGCC 2340 AGCAACGCGC TCTTCCATTC ACCGCTGGAG CTGCGCTCGG CCTGCGCGAG ATAGCGCGCG 2400 TGCAAGGCAT CGATCCGGCC GAAGTCGTGC GACCCGATCC AGCCTGTGCC TGCGCGTCCA 2460 GTTCTGCGGG AAAACCGGCA TCGGGCTCGG CGGGAACGAT CCGCGCCAGC GCGCGGTCCG 2520 GCAGGTCCTG CGCGGGCGCG GGCGCCGCAA CCGCCGCGCA GCACGCTAGC GCGAACGCGG 2580 CGATCCAGGC GATGTGCGGG CGGGCAGAGG CCGGCGGCGT CCCCGGTTCG GGTCCGGCAT 2640 CAACCCGGAA GCTCGGCTTC GAAGATGCAA TACCCGGCAT CGCTCATCCC CTGTGCGGTG 2700 TAGGTCTTCT GCGCTGGAGT ATTCGCGCGT TCGACGTACA ACCGCAAGCC GATCACGCCG 2760 GCGCTGGCCT GCGCCAGCGC GTCGACGTGG CGATGCAGGG CGTCGTAGAC GCCTTGCCGG 2820 CGGTGCTCGG GATCAACGTA CACGCTCTGA ATCCACCACC ACTCGCCGTT GCGCCAATCG 2880 CTCCACTCGC GCGTCAGCAT CAACGTGCCC GCGGGGACGG CAATGGTTTC GCGGCCGGCG 2940 GTGTCGGCTT CGCGCATGGC GACGAAGTAG CGCGCCTTGG CCGGATCGCC CAGACCGGCG 3000 GCGACGCCGG CGTGGACGGT GGCGGGTCCA GGCGCTTGTG CTCGGTTTCC CAGGCCATCG 3060 CGATCATCCA CTGCGCAATC AGGTCGCAGT CGGCGGGCGC GGCGTCGCGG ATGCGCAGGC 3120 GGGTCATGGC GGCGGAGTCG AGCGTTAGCG GCCGGTCTTG ATGACGCCGC AAGCCAAGCG 3180 CGCACCGGCG TTGCCGGTGG GCTGGCTCTT GTAGTCGTCC GGCGAGGCGT GGACGATCAC 3240 CGCGCGGCCG GCGACGTCGT TGGGCGCGCC GCCGCCGAGG GTCACGCCGC TGGCGTGCGC 3300 GTCGACCTTG GCCACGCCTT CGGCGTTGGC GACCAGGTTG TCCATGTCGC CGGCGTGGTG 3360 CGCGCCGTGG TCGACCTGGC CGTGCGGCTG CGCGGCCGGA TTGAAGTGAC CGCCCGCGCT 3420 GGTGGCGTCG GCGGCGCTGC AATCGCCCTT CTCGTGGATG TGGATGGCGT GGGTGCTGTT 3480 CGGGGTCAGG CCGCCGATCT CGCCGGTGAG GTGCACGCCG TCGCCCATCG GTCGCACCGT 3540 GAGCTTGCCG CTGACCAGGC TGCCGGAGGC CGAGGCCAGC ACCACGGTGG CCGAGCTGGC 3600 GGTGGACACG GGCTTGGCGC TGGCGGCCGG CGGCGGCGTG GGTTTGACGG TCTGGCCGCC 3660 GCAGGCCGCG AGCGCGGCGG TGGCGGCGGC GAGAACGGCG ATGCGAAGAG TCGCGGACAT 3720 GGCGGTGCTC CTGGTCGGCG GCGTCGCGCA GCGACGCCCG GTCGTGGGTC CGACGCTAGC 3780 TGGGCCTGGG TTCAGCGCGA GTGAAGCGCG CGAAGGCGTG GCGGCGCGGC GTGTGTGGTG 3840 GCCTTGCGTC GCGATTATGG CGGCGCTGCG GGTGATCGCG CCACGGCGCG GGCGAGTCGC 3900 CAAGCGATGC ATCGTTGCGT TGCGGCAAAA GCAGCGTCGC TGCGGCGATT GTGGGAGGCC 3960 TTTCAGGCCC GACGCTTT 3978 // ID Contig117 standard; DNA; UNC; 3656 BP. XX DE Contig117.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..3656 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene 1045..2688 FT /locus_tag="DeVSDRAFT_0051" FT /colour=13 FT CDS 1045..2688 FT /locus_tag="DeVSDRAFT_0051" FT /product="hypothetical protein" FT /note="SPTR: Q1XMF4 Hypothetical protein. Flavobacterium johnsoniae UW101." FT /note="KEGG: mxa:MXAN_3633 hypothetical protein " FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MGGRPGPLVQGSVLPPHRSRAQGARQGGDRDQPRRPFLRRGRPLDLHGAGPRARNHRPPAPRPCCRKRRACGGRHSPIPR FT ASCGRAGGLRHRGSRAMTDVIEKNGNDISLLNGEFHHYVQAKGLLERIPFRDMATTDFMRNYEYPINSWPFFVSPELVAS FT MQEMNANILRMTYKAVRAVFSEDPMKMAAAMNMDPVRCSFFFNGVEFTDICFRTDAILTDDGLKLVEVNVGTAIGGWQIQ FT WMDEAFRQFDGYREFFDRNAVTCRNTPVTFFKFLIESAAKVARGARVHILVKVRAGFDAGVYGSFLQQYIAAAVRESAID FT CDIGFYASFDELEVTHEGTFHRGRRVHLATFGDLSKESGPPLELLRSIFAGKIACPDFPTYELLSDKRHMALLHHAAQHG FT LLSEHEAALVRRYVPKTFILGGPLFSQAVRDELLENKDAYVVKQCNGMQGMDVHVGRFVSDHDWREIIANLRQPELWIAQ FT AYCESKKFYGHSGQSRDVFNFVWGVFQFGERFGGSWIRMMPEKGKEYDGVINSARGAEERIVFEAAR* FT " FT gene 2743..3531 FT /locus_tag="DeVSDRAFT_0052" FT /colour=13 FT CDS 2743..3531 FT /locus_tag="DeVSDRAFT_0052" FT /product="conserved hypothetical protein" FT /note="SPTR: A0XU82 Hypothetical protein precursor. Sphingomonas wittichii RW1." FT /note="KEGG: gsu:GSU1608 hypothetical protein " FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MAINLAAPGRLPRAVCALVLALGVCAPAWAERTDIDVRVLARGAKFIGGYTASASVTLTDADTGEVLARGLTQGTTGDTE FT RILKGGVNGDGRLASGDSAVFKASLDLKSARRVTATVTGPLSQPQAATTVVSTQWVLPGRHVTAGDGWLLELPGLIVDLV FT QPAAYQWSDKNSSVPLQAAVTMMCGCGLSENGPWKVGDTEVEASVSINGKPQPVQKLAFDAASGKFATQIKTQGPGIYEV FT EVRAWAGPTNNAGVARTAFFVH* FT " FT sig_peptide 2743..2835 FT /colour=11 FT /locus_tag="DeVSDRAFT_0052" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 0.905) with cleavage site probability 0.883 at FT residue 31" SQ Sequence 3656 BP; 640 A; 1223 C; 1201 G; 592 T; 0 other; CGGTGACATC GTCGGCATGC TCGGCTTCAT GGCCTACCTG AACTTCTCGG TGTTCGTGTT 60 CGTGCTCCAG GCCATCGCCT TCGGCGTGGT CACCTACCAG ATCCCGGTGT TCATCGCCAA 120 CCGCTACTTC CAGCGCTCGC GCCAGCGCAT CGACTCGCTG CAGGAGGCGA TCCAGGGCCT 180 GATCGCCGGC GCCAAGGAGC TCAAGCTCGA CGCCGACAAG CGCGAACGCT ATTTCCAGGA 240 CGTGCTGATG GAGAACGAGT ACGCGGTGCT GGAGGCCGAC AAGGCCGGCA ACACCGTGGT 300 GCGGCTGGCC GCCAACTACG GCGACATGAT CAGCTTCTTC GTGATCGGCG TGATCGCCTA 360 CGTGTTCATC AACTACCACG CCATCACCCC GTCGGAGCTG ACCGGGGTGG TGATGGCCAT 420 GCTCTACATC ACCACGCCCA TCGCTCTGGT CATCAACACC GTGCCATCGG TGGTCATGGC 480 CAAGATCTCG CTCAACAAGG TCAACAGCAT CATGCGCAGC ATTCCCGCCG AGTCGTATCC 540 GGCGGCGAAA AGCGCCGATG TCCCGGCCTG GGACGAACTG CGCGTGCGCG GCCTGCGCTA 600 CCAGCATCGC GGCTCGAAGG ACGAGGCCGG CTTCCAGATC GGCCCGATCG ACCTGGACAT 660 CCGCCGCGGC GAGGTGACTT TCATCGTTGG CGGCAACGGT TCGGGCAAGT CGACCCTGAG 720 CAAGCTGCTG ACCCTGCATT ACTCGGCCAG CGAAGGCGAA ATCCTGTTCG GCGAGCAGCG 780 CCTGGACGCG GACAACTTCG CCGCCTACCG CCAGCGGATC TGCGCGATCT ATTCCGACTA 840 CTACCTGTTC GACCGCCTGC TGTGCGAGCG CAAGCCCGAG GAGGAGGAGC GGATCAAGGA 900 GTACATGGCC CTGCTCAAGC TCGAGGACAA GCTGGCGATC GAGCAGCGCA GGTTCTCGAC 960 CACGGCGCTG TCGGACGGCC AGCGCAAGCG CCTGGCGCTG CTGGCGGCGC TGCTGGAAGA 1020 CAAGGATCTG TACCTGTTCG ACGAATGGGC GGCCGACCAG GACCCCTCGT TCAAGGAAGT 1080 GTTCTACCGC CGCATCGTTC ACGAGCTCAA GGCGCGCGGC AAGGCGGTGA TCGTGATCAG 1140 CCACGACGAC CGTTTCTTCG ACGAGGCCGA CCGCTTGATC TACATGGAGC AGGGCCGCGT 1200 GCGCGAAACC ATCGACCGCC CGCGCCTCGC CCTTGCTGCC GGAAGCGTCG CGCTTGCGGC 1260 GGCCGTCATT CCCCAATCCC TCGGGCGTCC TGCGGCCGCG CAGGAGGCCT TCGCCATCGC 1320 GGATCAAGAG CCATGACCGA CGTCATCGAG AAGAACGGAA ACGATATCTC GCTGCTCAAC 1380 GGCGAGTTCC ATCACTACGT CCAGGCCAAG GGGTTGCTGG AGCGCATCCC GTTCCGCGAC 1440 ATGGCCACGA CGGATTTCAT GCGCAACTAC GAATACCCGA TCAACTCCTG GCCGTTCTTC 1500 GTCTCGCCCG AGCTGGTGGC GAGCATGCAG GAGATGAACG CCAACATCCT GCGCATGACC 1560 TACAAGGCGG TGCGCGCGGT GTTTTCCGAG GATCCGATGA AGATGGCCGC GGCCATGAAC 1620 ATGGACCCGG TGCGCTGCTC GTTCTTCTTC AACGGCGTGG AATTCACCGA CATCTGCTTC 1680 CGCACCGACG CGATCCTCAC CGACGACGGG CTCAAGCTGG TCGAGGTCAA CGTCGGCACC 1740 GCCATCGGCG GCTGGCAGAT CCAGTGGATG GACGAAGCCT TCCGCCAGTT CGACGGCTAC 1800 CGCGAGTTCT TCGACCGCAA TGCGGTGACC TGCCGCAACA CGCCGGTGAC GTTCTTCAAG 1860 TTCCTGATCG AATCGGCGGC CAAGGTCGCG CGCGGCGCCA GGGTCCACAT CCTGGTCAAG 1920 GTGCGCGCGG GCTTCGATGC CGGCGTGTAC GGCAGCTTCC TGCAGCAGTA CATCGCCGCG 1980 GCGGTGCGCG AGTCGGCGAT CGACTGCGAT ATCGGCTTCT ACGCCTCGTT CGACGAGCTG 2040 GAGGTGACCC ACGAAGGCAC CTTCCATCGC GGCCGCCGCG TGCACCTGGC GACCTTCGGC 2100 GACCTGAGCA AGGAATCGGG CCCGCCGCTG GAGCTGCTGC GCAGCATCTT CGCCGGCAAG 2160 ATCGCCTGCC CGGATTTCCC CACCTACGAG CTGCTGTCGG ACAAGCGCCA CATGGCGCTG 2220 CTGCACCACG CCGCCCAGCA CGGGCTGCTG TCCGAGCACG AAGCCGCGCT GGTGCGGCGC 2280 TACGTGCCCA AGACCTTCAT CCTCGGCGGG CCGCTGTTCT CGCAGGCGGT GCGCGACGAA 2340 CTGCTCGAGA ACAAGGACGC CTACGTGGTC AAGCAGTGCA ACGGCATGCA GGGCATGGAC 2400 GTGCACGTCG GCCGCTTCGT GTCCGACCAC GACTGGCGCG AGATCATCGC CAACCTGCGC 2460 CAGCCCGAGC TGTGGATCGC CCAGGCCTAT TGCGAATCGA AGAAATTCTA CGGCCACTCG 2520 GGCCAGTCGC GCGACGTGTT CAACTTCGTC TGGGGCGTGT TCCAGTTCGG CGAACGCTTC 2580 GGCGGCTCGT GGATCCGGAT GATGCCGGAG AAGGGCAAGG AGTACGACGG CGTGATCAAC 2640 TCCGCGCGCG GCGCGGAAGA ACGCATCGTG TTCGAAGCCG CGCGCTGAGG CGGCGCGGTT 2700 CCATCATCGG CAACAAAGCA ATCGGTAGAG GAGTGCATCT GGATGGCAAT CAATCTCGCG 2760 GCCCCGGGCC GGCTCCCGCG CGCGGTCTGC GCGCTCGTCC TGGCGCTGGG CGTGTGCGCG 2820 CCGGCCTGGG CCGAACGCAC CGACATCGAC GTGCGGGTGT TGGCGCGCGG CGCCAAGTTC 2880 ATCGGCGGCT ACACCGCGTC GGCATCGGTG ACGCTGACCG ACGCCGACAC CGGCGAAGTG 2940 CTGGCGCGCG GCCTGACCCA GGGCACCACC GGCGACACCG AGCGCATCCT CAAGGGCGGC 3000 GTCAACGGCG ACGGGCGGCT CGCCAGCGGC GATTCGGCGG TGTTCAAGGC CTCGCTGGAT 3060 CTCAAGTCCG CGCGCCGCGT CACCGCCACC GTCACCGGCC CGCTGAGCCA GCCGCAGGCC 3120 GCGACCACGG TCGTCAGCAC GCAGTGGGTG CTGCCCGGCC GCCACGTCAC CGCCGGCGAC 3180 GGCTGGCTGC TGGAACTGCC GGGGCTGATC GTCGACCTGG TGCAACCGGC CGCGTACCAG 3240 TGGTCGGACA AGAATTCGAG CGTGCCGCTG CAGGCCGCGG TGACGATGAT GTGCGGCTGC 3300 GGACTGTCGG AGAACGGCCC GTGGAAGGTC GGCGACACCG AAGTGGAAGC CAGCGTGTCG 3360 ATCAACGGCA AGCCGCAGCC GGTGCAGAAG CTGGCGTTCG ATGCGGCCAG CGGAAAATTC 3420 GCCACCCAGA TCAAGACCCA GGGGCCGGGC ATCTACGAAG TGGAAGTGCG CGCCTGGGCC 3480 GGGCCGACCA ACAACGCGGG CGTGGCGCGC ACCGCGTTCT TCGTGCACTG ACGCGTATCG 3540 GGACGGTGCG CGGATGACGC TGCCCGGTTC GGTTCGCGGA TCGCCGCCGA CGCGCGCACG 3600 GCGCCGGCGG CGGGTCGTTG CGCGCGCTCG CGCGTCAGGC GACCACGCGT TCGAAG 3656 // ID Contig1192 standard; DNA; UNC; 4397 BP. XX DE Contig1192.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..4397 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene complement(598..1032) FT /locus_tag="DeVSDRAFT_0057" FT /colour=11 FT CDS complement(598..1032) FT /locus_tag="DeVSDRAFT_0057" FT /product="NAD dependent epimerase/dehydratase family" FT /note="SPTR: Q099E2 Isoflavone reductase. Stigmatella aurantiaca DW4/3-1." FT /note="KEGG: mxa:MXAN_0533 NAD dependent epimerase/dehydratase family " FT /note="COGs: COG0451 Nucleoside-diphosphate-sugar epimerases category=G" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT VRDLAAFLLTTIERGQFGIYNADGEPGTLTMGALLRESQRASGKKSSVTWVPADFLEAQKVSAWGDMPAWIPARGEYAGF FT GRTSVSKARAAGLTYRPLRETVRDTLAWWRKLPEERRAKPKAGLSAQREGEVLAAWHAQEKRGG* FT " FT gene complement(959..1726) FT /locus_tag="DeVSDRAFT_0058" FT /colour=11 FT CDS complement(959..1726) FT /locus_tag="DeVSDRAFT_0058" FT /product="Male sterility C-terminal domain" FT /note="PFAM: NAD-dependent epimerase/dehydratase; Male sterility C-terminal domain" FT /note="SPTR: Q099E2 Isoflavone reductase. Stigmatella aurantiaca DW4/3-1." FT /note="KEGG: mxa:MXAN_0533 NAD dependent epimerase/dehydratase family " FT /note="COGs: COG0451 Nucleoside-diphosphate-sugar epimerases category=G" FT /note="InterPro IPR001509:IPR006311:IPR013120" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT MTIDRRDFLAAGAAAMSLLALPGGALAAARAKPLKLLVLGGTGFLGPHFVEAARKRGHTLTLFNRGKTNPDKFSGEDYRD FT IEQLHGDRKTDLSALAGERQWDAVLDTSAYIPADVTRSAKLLAPKIKQYVLVSTISVYAKNDVPSDENSPLAVLADPTVD FT KVSNETYGGLKALCEKAPEAELPGRTTVVRPGLIVGPGDNSDRFTYWPARADRGGEILGPRQCARPD-VHRCARSRCVPA FT DDDRARPVRHLQRRR* FT " FT gene complement(1723..3066) FT /locus_tag="DeVSDRAFT_0059" FT /colour=13 FT CDS complement(1723..3066) FT /locus_tag="DeVSDRAFT_0059" FT /product="conserved hypothetical protein" FT /note="SPTR: A1FX22 Hypothetical protein. Stenotrophomonas maltophilia R551-3." FT /note="KEGG: xac:XAC3056 hypothetical protein " FT /note="COGs: COG3202 ATP/ADP translocase category=C" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MSGLRKALTSTPPLWWSLLYFFCLLCGYYVLRPVRDAMGASADAATVFPHAWIDWARGHGWELKDFVLQVLFTCTFVAML FT ALQPVYGALVARFPRRALLPMVYGVFILCLFGFHWAFHAQLPGRGMVFFVWTAIFNLFAVTVFWSYMADVFDDRQARRVY FT GYIGAGGTAGAVLGPMLTQWLVQPLGVANLLLVSAAFLSVCVLCVVRLRPWAIARERAQGLVSGEGAMGGSVWAGLRLVW FT QRPALRAMAITLFFSVGAATLLYNQQSAIAREFYPSAEAATRYFARIDSAVNLLAILTQLLLTRWLLNRYGVAPALLMPG FT LILLLGFAALMASPLPMMVAVVQVLQRSSEFALSKPARETLYTRMDRPSRYKGKAVIDTAVFRGTDLAFVWIHKAVALLG FT TQAVFAAGALAAAGMTAGAWSIVRAQRGLPGATDSVPSIEPNPRGAA* FT " FT gene 3246..4055 FT /locus_tag="DeVSDRAFT_0060" FT /colour=13 FT CDS 3246..4055 FT /locus_tag="DeVSDRAFT_0060" FT /product="hypothetical protein" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MVIPTFGMGGGRCKPAPVRTIERPDTDRKHRAFRDGFHGSAPRHCPRRGRTDSLAWRSPEPEAMHAHAVPRFRPLWLCAL FT LASACTASSFTHAPAKESAAMTSHPRVPLLQPDELGARMLKLIGSIRGLADLSPENIERQTGLTVEIRSQDRTDYGLVGQ FT LQDRGDYSLSAVSYRPGQKPARLDLRLSPQTGAGCALEFGATRDALLAAGFAADGPQQPAGLDDPGYRTTEPWSYMRDKV FT EVELYPADDLAAGQGGRTCLNKISIHVDA* FT " FT misc_feature complement(1640..1705) FT /colour=11 FT /locus_tag="DeVSDRAFT_0058" FT /note="1 probable transmembrane helix predicted by FT TMHMM2.0" FT misc_feature complement(order(1798..1863,2071..2136,2158..2214, FT 2260..2325,2443..2508,2524..2589,2629..2685,2716..2775, FT 2797..2862,2974..3027)) FT /colour=11 FT /locus_tag="DeVSDRAFT_0059" FT /note="10 probable transmembrane helices predicted by FT TMHMM2.0" FT sig_peptide complement(1643..1726) FT /colour=11 FT /locus_tag="DeVSDRAFT_0058" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 1.000) with cleavage site probability 0.815 at FT residue 28" SQ Sequence 4397 BP; 799 A; 1581 C; 1406 G; 610 T; 1 other; AATAACGACG AAAGCACCGC GGAACGCCCG CTGTAGGAGC GACGCAAGTC GCGACCGCGC 60 CAACACAACC ATCGCGCAGG TGTCGTCGTA GTTGCGAATT CGCAGTCGCG GCTCGCGCCG 120 CTCCTACAGT CGGATACGAA ACTGGCCGAA GCCCCTGTAG GAGCGACGCA AGTCGCGACC 180 GCGCCAACCC ACCTACGACA AACTCCGCCT AAGCCCGTTA GGTACGCCTG ACGACCAGCC 240 AAGATCAAAT GCTTCCGTCC GCAAGCGGCC GGGGCACTTT CTTTGTCCAA AGCAACAAAG 300 AAAGTAACCA AAGAAAGTGC TTTTTCCTGT TTCGAATCAA GAGCCACTAT CGTTCGGTGC 360 CTGCGCAGGG ATGCGCCACA CAGGCCATCC ATGGCCTGGG TGGCGCACGG CGCGCGTCCT 420 GCGCGCCGCC CTTCGGGTCT CTGATTGCCT GTGGCGAGTT TGGGGCGGCG GGGGGAGCGA 480 AGAGCAACGG CAACAGCAAC AGCAACGGTA CCCGCAACAT GGATTCCGAC CTTGGCCGAA 540 ATGGCTGTAG CAAGGCGTCA GTCCCTATCA AGGCCAAGGA CGCAACCAGC CGCCAGTTCA 600 ACCGCCCCGC TTCTCCTGCG CATGCCAAGC CGCCAACACC TCACCCTCCC GCTGCGCCGA 660 CAACCCAGCC TTCGGCTTGG CCCGCCGCTC CTCAGGCAGC TTGCGCCACC ACGCCAACGT 720 ATCGCGCACC GTCTCGCGCA AAGGCCGATA GGTCAGCCCC GCCGCGCGCG CCTTGCTCAC 780 CGACGTGCGG CCGAAACCGG CGTATTCGCC GCGCGCCGGA ATCCACGCCG GCATGTCGCC 840 CCAGGCCGAT ACCTTCTGCG CTTCCAGGAA ATCCGCCGGC ACCCAGGTCA CGCTGGATTT 900 CTTGCCCGAC GCGCGCTGCG ACTCGCGCAG CAACGCTCCC ATCGTCAACG TGCCCGGCTC 960 ACCGTCGGCG TTGTAGATGC CGAACTGGCC GCGCTCGATC GTCGTCAGCA GGAACGCAGC 1020 GAGATCGCGC ACATCGATGA ACTGNGTCGG GTCTTGCGCA CTGCCGGGGG CCGAGGATCT 1080 CGCCGCCGCG GTCGGCGCGC GCCGGCCAGT AGGTAAAGCG GTCGCTGTTG TCGCCCGGGC 1140 CGACGATCAG CCCCGGGCGC ACCACGGTCG TGCGGCCCGG CAACTCGGCC TCGGGCGCTT 1200 TTTCGCACAG CGCCTTGAGC CCGCCATAGG TTTCGTTGCT GACCTTGTCG ACGGTGGGAT 1260 CGGCCAGCAC CGCCAGCGGC GAGTTCTCAT CGCTCGGCAC GTCGTTCTTG GCGTAAACCG 1320 AAATGGTGGA GACCAGGACG TACTGCTTGA TCTTCGGCGC GAGCAGCTTG GCCGAGCGCG 1380 TCACGTCCGC CGGAATGTAG GCCGAGGTAT CCAGCACCGC ATCCCACTGG CGCTCACCGG 1440 CCAGCGCGCT CAGATCGGTC TTGCGGTCGC CGTGCAGTTG TTCGATGTCG CGATAATCCT 1500 CGCCGGAAAA CTTGTCTGGG TTGGTCTTGC CGCGGTTGAA CAAGGTCAGC GTGTGTCCGC 1560 GCTTGCGCGC CGCCTCGACG AAATGCGGGC CGAGGAAGCC GGTGCCGCCG AGCACCAGCA 1620 ATTTGAGCGG TTTCGCCCGG GCGGCGGCGA GCGCGCCGCC CGGCAGCGCG AGCAGGCTCA 1680 TGGCGGCCGC GCCGGCGGCG AGGAAATCGC GGCGATCGAT GGTCATGCGG CACCTCGTGG 1740 GTTGGGTTCG ATGGACGGTA CGGAATCGGT CGCGCCGGGC AGCCCGCGCT GTGCGCGCAC 1800 GATGCTCCAG GCGCCGGCGG TCATGCCCGC GGCGGCGAGC GCGCCGGCGG CGAACACGGC 1860 CTGAGTGCCG AGCAGGGCCA CGGCCTTGTG GATCCAGACG AAGGCCAGGT CGGTGCCGCG 1920 GAACACCGCG GTGTCGATCA CCGCCTTGCC TTTGTAGCGA GAGGGCCGGT CCATGCGCGT 1980 GTACAGGGTT TCGCGCGCCG GCTTGGATAA GGCGAACTCG CTGGAGCGCT GCAGCACCTG 2040 CACCACCGCG ACCATCATCG GCAGCGGCGA GGCCATCAGC GCGGCGAAGC CCAGCAGCAG 2100 GATCAGCCCG GGCATCAGCA ACGCCGGCGC GACGCCGTAG CGATTGAGCA GCCAGCGCGT 2160 GAGCAACAGC TGGGTCAGGA TCGCCAGCAG GTTCACCGCG CTGTCGATGC GGGCGAAATA 2220 GCGCGTGGCC GCTTCCGCGC TGGGATAGAA CTCGCGCGCG ATCGCCGACT GCTGGTTGTA 2280 CAGCAAGGTC GCCGCGCCGA CGCTGAAAAA CAGGGTGATC GCCATCGCCC GCAGCGCCGG 2340 CCGCTGCCAC ACCAGGCGCA GCCCGGCCCA GACCGACCCG CCCATCGCGC CCTCGCCGCT 2400 CACCAGCCCC TGCGCGCGCT CGCGCGCGAT CGCCCACGGC CGCAGCCGTA CCACGCACAG 2460 CACGCACACC GACAGGAAAG CGGCCGAAAC CAACAGCAGA TTCGCCACGC CCAAGGGCTG 2520 CACCAACCAC TGGGTCAACA TCGGCCCGAG CACCGCGCCG GCGGTACCGC CCGCGCCGAT 2580 ATAGCCGTAG ACGCGACGCG CCTGGCGGTC GTCGAACACG TCGGCCATGT AGCTCCAGAA 2640 CACCGTCACC GCGAACAGGT TGAAGATTGC GGTCCAGACG AAGAACACCA TGCCGCGGCC 2700 CGGCAGTTGC GCATGGAAGG CCCAGTGGAA GCCGAACAGG CACAGGATGA ACACGCCGTA 2760 CACCATCGGC AGCAGCGCGC GCCGCGGGAA GCGCGCGACC AGCGCGCCGT ACACCGGCTG 2820 CAGCGCCAGC ATCGCCACGA AGGTGCAGGT GAACAGCACC TGCAGCACGA AGTCCTTGAG 2880 TTCCCAGCCG TGGCCGCGCG CCCAGTCGAT CCAGGCGTGC GGGAACACCG TGGCCGCGTC 2940 GGCCGAAGCG CCCATCGCAT CGCGCACCGG GCGCAGCACG TAATAGCCGC ACAGCAGGCA 3000 GAAGAAATAG AGCAGCGACC ACCACAGCGG CGGCGTGCTG GTCAGCGCCT TGCGCAGGCC 3060 GCTCATGCGC GCGCTCCGGG TTCGCGCACA GGCGCGCGCA GACATCGCCG GTCATCGCCG 3120 CGCGCCGCGC TCAACGGCGC GCGCACGTCT TCGCCCCCGC ACCGCAAGCA CGGTTCGCGC 3180 ATGGTCGCTG CTCCCATTTT CCCGCGAACA AAGTAGCGCC GCGGCGGGAA TGGCGGCGTC 3240 TGCGGATGGT CATCCCGACC TTTGGCATGG GTGGAGGGCG CTGCAAACCG GCGCCGGTCC 3300 GGACAATCGA GCGGCCGGAC ACCGATCGGA AACATCGCGC ATTTCGCGAC GGATTCCACG 3360 GTTCCGCCCC GCGCCATTGT CCCCGCCGCG GCCGCACCGA TAGCCTTGCC TGGAGATCGC 3420 CCGAGCCCGA GGCCATGCAC GCCCACGCCG TCCCGCGCTT CAGACCGCTC TGGCTGTGTG 3480 CGCTGCTGGC ATCGGCCTGC ACCGCATCCT CGTTCACTCA CGCGCCGGCC AAGGAGAGTG 3540 CCGCCATGAC GTCCCATCCC CGCGTTCCGC TGCTGCAGCC CGACGAGTTG GGCGCGCGCA 3600 TGCTGAAGCT GATCGGCAGC ATCCGCGGCC TCGCCGACCT CAGCCCGGAA AACATCGAGC 3660 GCCAGACCGG ACTGACGGTC GAGATCCGCT CCCAGGACCG CACCGACTAC GGTCTCGTCG 3720 GCCAGTTGCA GGACCGCGGC GACTACAGCC TGAGCGCGGT GTCCTATCGT CCGGGCCAGA 3780 AACCCGCGCG CCTGGACCTG CGCCTGTCGC CGCAAACCGG CGCCGGCTGC GCGCTCGAGT 3840 TCGGCGCGAC CCGCGACGCG CTGCTCGCCG CCGGCTTCGC CGCCGACGGG CCGCAGCAAC 3900 CGGCCGGCCT CGACGATCCT GGCTACCGCA CGACAGAACC ATGGAGTTAT ATGCGCGACA 3960 AGGTCGAGGT CGAGCTCTAC CCGGCCGACG ACCTCGCCGC AGGCCAAGGC GGGCGCACCT 4020 GCCTGAACAA GATCAGCATC CACGTCGACG CCTGAGGAGC CGGGTATGGA CACCCCCGAA 4080 ACCCGTTTGA ACGCGATGCT CGACCGGTTC GAGAACGAGC ATCACCGCGC CGGGCGCAAC 4140 TTGCGCGCGC TGATCGGCGA TACGCCCGAA CTGCGCAGCC GCGTACTCAA GGCGATCGAA 4200 GCCGGCAACC TCGACGACTT CGCCGTGCTC GGCAGCGACC TGCGCAAACG CGGAAGCCTC 4260 GGCGCCTATC GGGCCGACAA CGAGACCATC GCCCTGCCGG AGGACCTGCT GCGCAAGGCC 4320 GGCCGGCGCG AAGATACGGC CAACTCGCTG CGCATGTTCA TCGGCCATGA AATCGAACAT 4380 GCGGTGCCCA AGAAGGA 4397 // ID Contig1195 standard; DNA; UNC; 3998 BP. XX DE Contig1195.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..3998 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene complement(628..1848) FT /locus_tag="DeVSDRAFT_0061" FT /colour=11 FT CDS complement(628..1848) FT /locus_tag="DeVSDRAFT_0061" FT /product="peptidase, alpha-lytic pro domain" FT /note="PFAM: peptidase S1 and S6, chymotrypsin/Hap; peptidase, alpha-lytic pro domain" FT /note="SPTR: P00778 Alpha-lytic protease precursor (EC 3.4.21.12) (Alpha-lytic endopeptidase). Lysobacter enzymogenes." FT /note="KEGG: sma:SAV1000 serine protease " FT /note="InterPro IPR001254:IPR001316:IPR004236" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT MRKFSTSVLAAAAALMVSGSALAADDLSPALKTAMQRDLGLSDTQLSQYLKLESVAATQAQTLQSKLGRNFAGTWLERKS FT DGSFALVAASTAIDNTAAKAVPGVETRRVRNSLAALDSAKGQLDSQLARNGKAPKGVYSWAVDLPSNTVVIGVAPGAEDA FT GVDFAARSGLDASTVRFETMKDRPQRRIAVQGGRGMLRDPGDGYLYACSVGFTVTKGSTPGYATAGHCGTVGEIVYQEVG FT QWNVGVRVGTFAASTMPSGTNSGPDRGWVKVDSTHTLSPSVYGYGNGDVTVRGSTEAAVGAALCRSGRTSGWHCGAIRSK FT NVTVSYVDDNNNPDGTVTGLTRTTACAEGGDSGGSFITGAGQAQGVLSGGSGSCQGSQGNNGGGNSYYTPINSILSTYGL FT TLRTSP* FT " FT gene complement(2276..2572) FT /locus_tag="DeVSDRAFT_0062" FT /colour=13 FT CDS complement(2276..2572) FT /locus_tag="DeVSDRAFT_0062" FT /product="hypothetical protein" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation="MATAIKVSQCDNELHIIASTGAGSAEVCHLSSGYNDPVSYSVNLNSILPAGKYDLTLVGINWGGPAGFNVNVGGTAYTYSDQNAPVGVVWSKTIQVTV*" FT gene complement(3523..3996) FT /locus_tag="DeVSDRAFT_0063" FT /colour=11 FT CDS complement(3523..3996) FT /locus_tag="DeVSDRAFT_0063" FT /product="serine protease" FT /note="SPTR: Q0FNP0 Putative serine protease. Roseovarius sp. HTCC2601." FT /note="KEGG: sma:SAV6649 serine protease " FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT GGNGNMNLDNTSCFGSPFPGGRADSGSIIVGAGGPRSNAWCSDGTAERAKQSFSTYGSRVNVQAWGRCVTTTGYAELYNG FT GANAYYTKTFSGTSSASPIVASAVVALSGIAKQRGITLTPRQMRDLLRTTGTAQTGGGNIGPLPNLRAAIAQLGALR* FT " FT sig_peptide complement(1777..1848) FT /colour=11 FT /locus_tag="DeVSDRAFT_0061" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 1.000) with cleavage site probability 0.733 at FT residue 24" SQ Sequence 3998 BP; 594 A; 1158 C; 1499 G; 747 T; 0 other; TAGTCGTGAG GCAAGGAATA TGGCCAACCG GCTTGTTGCG GCTGTGATTG GCGGTATTGC 60 CAAGTCATTA GTCAGTCGTG CCGCAGATGT ATTTGGTACT CGTGAACTTA TGCCATTGAT 120 CGATCGAATG GATGCCATCG CTCAGGCTTC CGGTGATTTG GATAACGCGC TGATCGTGCT 180 CGTCGCTCGG ATCGGTGCGG AAAGGGATTA CCCACGTGAA CGTGTGGAGG CCATGTTGAA 240 GAAACTACGT CTAGCCGACG TCTTGCCGAG AGCAGCGCTA GCGCATGCGG TGGTTAGGGG 300 GTTCTACTTG CAGCCGCCGC CTCACGCTAT TAGAGATTCA GCCTGTGCGA GGTTGGGGAT 360 TCAAATCAGG AATGTTCCTA CTAGACTTCA GGGGTTGCCA AAGCCAAGGG GTTGATTGCG 420 CATCTGTACG TGACGTCCGC TATTAGGGCT TGTGGTAATA CTTGGTGCGG GTCGACGGCG 480 AGGTTGCGTG GGAGGGGCGG GCCTTACGAT AGTTATCGAG CAAAGACGGA TCGCCGCAGC 540 TTGAATCGCT TCTACAAAAC TGTGTTGGGG CGCATAAAAA AGCGCCCCGC AGAAGCGGGG 600 CGCTTAGGGG GAGGTTCGGT TGCGAAGTTA CGGGCTGGTG CGCAGCGTCA ACCCATACGT 660 GCTCAAAATC GAATTGATCG GCGTGTAGTA GCTATTGCCG CCACCGTTAT TGCCCTGGCT 720 ACCCTGGCAG CTACCGCTAC CCCCCGACAA CACGCCCTGC GCCTGCCCAG CGCCGGTGAT 780 GAACGAACCA CCCGAATCGC CGCCCTCGGC GCAAGCAGTG GTGCGAGTCA ACCCAGTCAC 840 CGTGCCATCG GGATTGTTGT TGTCGTCCAC ATACGAAACG GTGACGTTCT TGCTGCGGAT 900 CGCACCGCAA TGCCAGCCGC TGGTGCGGCC CGAGCGGCAC AGCGCGGCGC CGACGGCGGC 960 TTCGGTGCTG CCGCGCACGG TGACGTCGCC GTTGCCGTAG CCGTAGACGC TCGGCGACAG 1020 GGTGTGGGTG CTGTCGACTT TCACCCAGCC GCGGTCGGGG CCGCTGTTGG TGCCGCTGGG 1080 CATGGTCGAG GCGGCGAAGG TGCCGACGCG GACGCCGACG TTCCACTGGC CCACTTCCTG 1140 ATAGACGATT TCGCCGACGG TGCCGCAGTG GCCGGCGGTG GCGTAGCCCG GGGTGCTGCC 1200 CTTGGTGACG GTGAAGCCGA CCGAGCAGGC GTACAGGTAG CCGTCGCCCG GGTCGCGCAG 1260 CATGCCGCGG CCGCCTTGGA CGGCGATGCG GCGCTGCGGG CGGTCTTTCA TGGTTTCGAA 1320 GCGCACGGTG CTGGCGTCCA GGCCGCTGCG CGCGGCGAAG TCGACGCCGG CGTCTTCCGC 1380 GCCCGGGGCG ACGCCGATCA CCACGGTGTT GCTGGGCAGG TCGACCGCCC AGCTGTACAC 1440 GCCCTTCGGC GCTTTGCCGT TGCGCGCCAG TTGGCTGTCG AGCTGGCCCT TGGCGCTGTC 1500 GAGCGCGGCC AGGCTGTTGC GCACGCGGCG GGTTTCTACG CCCGGCACGG CTTTGGCGGC 1560 GGTGTTGTCG ATCGCGGTGC TGGCGGCGAC CAGGGCGAAG GAGCCGTCGC TCTTGCGCTC 1620 CAGCCAGGTG CCGGCGAAGT TGCGGCCGAG TTTGCTCTGC AGGGTCTGCG CCTGCGTCGC 1680 GGCGACGCTT TCGAGCTTGA GGTATTGGCT GAGCTGGGTG TCGCTCAGGC CCAGGTCGCG 1740 CTGCATGGCC GTCTTCAAGG CGGGGGAGAG GTCGTCGGCG GCCAGGGCCG AGCCGGACAC 1800 CATCAGGGCT GCGGCGGCAG CGAGAACCGA CGTGCTGAAC TTGCGCATAT CCGAAAACTC 1860 CTTAAGCAAG GGTAGGGATG CGAACGATGG ATGCGGCAGG TCTGGCGTGT GGTTGGTTCG 1920 CGCACGTGCC TGTGCAGGGT GCGCCGTTGT GCCGCACTGT CCGAAACGGC GCCTGGCGAA 1980 GGCGCCCCTA CCTGCGAAAT GAGACGATCG TGCTACTTCG GAAGATCGGC TTTTTGGCGG 2040 AGTTCGGATG AAAAGAATGA ACATCAAGCG CGTAGCGTGA TGCGTGTTCG CAGTGTTTCT 2100 ACGGCTGCGC TTCCGCTCGC TTCGCAGGCT TAGCGCGTGC TGAAGCCGGG CCGAAAAACG 2160 TGATGCGCGC TGTGTGGCTT TCGGTACGAA TACAGAAAAC GCAAAGGCCT GCCGGAAGCC 2220 CGGCAGGCCT GTTTGCCGCG TTTGGCCAAT GGCGTCGGCG CTCGCGCGCC GGCGCTTAGA 2280 CCGTGACCTG GATCGTCTTC GACCACACCA CGCCGACCGG CGCGTTCTGG TCGCTATAGG 2340 TGTAGGCGGT GCCGCCGACG TTGACGTTGA ATCCGGCAGG GCCGCCCCAG TTGATGCCGA 2400 CCAGGGTCAG GTCGTACTTG CCGGCCGGCA GGATCGAGTT GAGGTTGACC GAGTAGCTCA 2460 CCGGGTCGTT GTAGCCGGAG CTGAGGTGGC AGACCTCGGC CGAGCCGGCG CCGGTGGAAG 2520 CGATGATGTG GAGTTCGTTG TCGCACTGGC TAACTTTGAT CGCGGTGGCC ATGAGTCGTT 2580 GTCCCCTGAT TGGTGATGGT CGGTTGCGTG GAGTGCGGCG GAGCGGTGCG CGGTCGCGGC 2640 GGTCGCGAGG CTTCAGCGTC GCTATGCGGG CGAATGCGTG GCTTCGCTGC CCGGGCAGTA 2700 TTCGCGTTCG CTATGCGGCG CATGGGCTCA GTGCGGGCTC AGCGCGGGAT CACTTCGGTG 2760 ATGCGGCGTG AGCGCTCACG CCGCCGGCGT TGCGCGCACC AGTCGCATCA CCGGGACGCC 2820 GAAGCAGCGG GCCAGTTCGT GGGCGATGCG GAAGCGCACG GCGCGGCCGG ATTCGGCGCG 2880 TTTGATCGTG GCGACCGAAA CGCGGATGTT GCGGCGCCAG CAATCGTCGG CGAGGTCTTG 2940 CTGGCTCAGC AGGCGGCTTT GCCGCAGCCG TCGCAGTTCG GCGCTGTCTA GCGTCACCTG 3000 GCCGCGCAGC GGCGGTGCGT CGGCGTGGGG CGCGTCGCCG GGCGATTCGC GTGCGGCGAC 3060 GGCGTTGGGA ACGGGAAGGG GCGAGGCGTG CATGGCGCGC GGTCCTGGTG GGCGATACGG 3120 CGGAGTGCCG CGTTGTTCGA ACGCGCGCGT CGTGAGGTCG TGACGGGCGG ATCGTGCAGC 3180 GGGTCGGCGC GCAGGATGGC GTCGCCGCGC GCGTGGCGCC TTTCGGGAAC CTGCCGGTGT 3240 CGGCGGTTGC GTCGTGGTCG TTATGGTCGT CGCCGAATGC GGTGGGAACT GCGCGCATCG 3300 GCCGTCATCG AATGAGGCCT GCGTCGCGCC GATACGGTGC GTTCGGACGA GCGCGGCTAG 3360 CTGCGGTTAG ACGCAGTGAG CGCAGCGATG GGCGCGCGTG ATCGGCGCGC GGCGTCGATA 3420 TCGCCGATGC GACGGACGCA TGACGGCGGC GTTGCGCTTG CGGACGCCGG ATGCGGCCCG 3480 CAAAACGCGG GCGAAGGGCG CCGGCCCTTC GCCCGCGTAC GCTCAGCGCA GCGCGCCGAG 3540 CTGCGCGATC GCCGCGCGCA GGTTCGGCAG CGGGCCGATG TTGCCGCCGC CGGTCTGGGC 3600 GGTGCCGGTG GTGCGCAGCA GGTCGCGCAT CTGCCGCGGG GTGAGGGTGA TGCCGCGCTG 3660 CTTGGCGATG CCCGACAGCG CGACCACCGC CGAAGCGACG ATCGGCGAAG CGCTGGAGGT 3720 GCCGGAGAAG GTCTTGGTGT AATAGGCGTT AGCGCCGCCG TTGTAGAGCT CGGCGTAGCC 3780 GGTGGTGGTG ACGCAGCGGC CCCAGGCTTG CACGTTGACG CGCGAACCAT AGGTCGAGAA 3840 CGACTGCTTG GCGCGCTCGG CGGTGCCGTC GCTGCACCAG GCGTTGGAGC GCGGGCCGCC 3900 GGCGCCGACG ATGATCGAGC CCGAGTCCGC GCGGCCGCCG GGGAACGGCG AGCCGAAGCA 3960 AGAGGTGTTG TCGAGGTTCA TGTTGCCGTT GCCGCCGG 3998 // ID Contig1197 standard; DNA; UNC; 4313 BP. XX DE Contig1197.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..4313 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene complement(84..959) FT /locus_tag="DeVSDRAFT_0064" FT /colour=11 FT CDS complement(84..959) FT /locus_tag="DeVSDRAFT_0064" FT /product="alpha/beta hydrolase fold" FT /note="PFAM: alpha/beta hydrolase fold" FT /note="SPTR: Q4J0L0 Alpha/beta hydrolase fold. Azotobacter vinelandii AvOP." FT /note="KEGG: pol:Bpro_0547 twin-arginine translocation pathway signal " FT /note="COGs: COG0596 hydrolases or acyltransferases (alpha/beta hydrolase superfamily) category=R" FT /note="InterPro IPR000073:IPR000639:IPR003089" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT MSSTHFPVRHRHVDADGVRVFYREAGDPTAPTLLLLHGFPTSSLMFRELIDKLAHRFHLVAPDLPGFGFTEVPEQRGYVY FT NFDNLGRTLEAFVDALNLQRYVLYVFDYGAPTGLRLALAKPERVAGLISQNGNAYLEGLGDAWDPMRRYWADPSAENREA FT LRQFLSLEATRWQYENGEPDPSLVAPEAYHLDYLLMQRPGNADIQLDLTLDYANNLPLYPRFQQFFRERCVPTLVIWGQH FT DPFFIPPGAQAYRRDNPEAQVELLDAGHFALGTHGAHIARRIGEVFGDLPG* FT " FT gene 1091..1654 FT /locus_tag="DeVSDRAFT_0065" FT /colour=11 FT CDS 1091..1654 FT /locus_tag="DeVSDRAFT_0065" FT /product="protein of unknown function DUF1470" FT /note="PFAM: protein of unknown function DUF1470" FT /note="SPTR: Q4J0L1 Hypothetical protein. Azotobacter vinelandii AvOP." FT /note="KEGG: rso:RS05465 hypothetical protein " FT /note="COGs: COG5516 Conserved protein containing a Zn-ribbon-like motif possibly RNA-binding category=R" FT /note="InterPro IPR010852" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT MTTPTPTDWPPLIAGQPALDLLNTLTLEDGALVEHLGDDAAAAAWLSRLTGAAQAPQPQLAERARELREAIRTAVQARKQ FT EQPLELAPLNALLARMHSHLVLEPGEGGPALRRAAVGDPAWLALAPLGEAAAQLLAELDFGLVRQCEHSECVLWFHDTTK FT SHRRRWCSMALCGNRHKVSEFRKRRGG* FT " FT gene 1705..2322 FT /locus_tag="DeVSDRAFT_0066" FT /colour=2 FT CDS 1705..2322 FT /locus_tag="DeVSDRAFT_0066" FT /product="Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit-like" FT /note="SPTR: A0LLR5 DNA gyrase, B subunit (EC 5.99.1.3). Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)." FT /note="KEGG: sfu:Sfum_2689 DNA gyrase, B subunit " FT /note="COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit category=L" FT /codon_start=1 FT /transl_table=11 FT /colour=2 FT /translation=" FT MESHFSPQNIEVVSAMEAVRRRQHMYFDTGKADIASELAMQALCHAADEAMDGRCNTVSVRVSGSRVEVRYDCGMPLTPD FT PYDPQWTVAEMFLLTLRGCSSRKKHIEIGSEFCGIGLGILNAVCSEMDVDTVDAGQGVHLRFQRGEQIGTCVVTPSDRPD FT GTRIEFELDNSVLAETALSETALGAALERLAARFPGIAVSLDFRR* FT " FT gene 2478..4313 FT /locus_tag="DeVSDRAFT_0067" FT /colour=9 FT CDS 2478..4313 FT /locus_tag="DeVSDRAFT_0067" FT /product="Endothelin-converting enzyme 1" FT /EC_number="3.4.24.71" FT /note="PRIAM: Endothelin-converting enzyme 1" FT /note="PFAM: peptidase M13, neprilysin; peptidase M13" FT /note="SPTR: A0J354 Peptidase M13 precursor (EC 3.4.24.71). Shewanella woodyi ATCC 51908." FT /note="KEGG: sfr:Sfri_1958 endothelin-converting enzyme 1 " FT /note="COGs: COG3590 metalloendopeptidase category=O" FT /note="InterPro IPR000718:IPR006025:IPR008753" FT /codon_start=1 FT /transl_table=11 FT /colour=9 FT /translation=" FT MKLSRLSLTLALAAALAVPSVHAAGAAAAKAKPAAAKSAAGKPVLGDFGVDLSARDTSVKPGDDFNRYVSGHWLVTYQLK FT DYETSYGSFNKLRDDSEADVHAIIEELAKQQNLPAGSEKQKLRDYYASYMDRAARDAAGIAPLQPVLDKIAKIDSAGALI FT AAFGDTDLDGTSAPLRFGVDLDRKDPDQYLVGLRVGGLGLPDRDYYLNQDARFVGIRTAYLAHIERMLSFAGIKDAKARA FT QAVLDLETALAKPQWERAQLRNRDKTYNVSSFAELSKQYPGYDWAAQLKAQGMPVVDKVNVATPSAVQPVIEAVAKTPLP FT VWRDYLTFHAVRNNAGLLSREIDDVAFAFNGTVLSGQKAQRDDWKRAVATVTGSDGLGDAMGKLYVERHFSPQAKAAMQK FT LVENLRKALRANIEKIDWMGADTKAEAYRKLDSFRPKVGYPDKWRDYSSVTIVAGDLMANTQQLRRYQRADQVRRIGTRT FT DRDEWFMTPQTVNAYYNSTFNEIVFPAGILQAPFFDLNADAAVNYGGIGAVIGHEMGHGFDDQGSKSDYAGIQRNWWTDQ FT DRSRFEQLTKALGAQYDAFCPLPGQCVNGQLTMGENIGDLGGVSMGYTAYQL FT " FT sig_peptide 2478..2549 FT /colour=11 FT /locus_tag="DeVSDRAFT_0067" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 1.000) with cleavage site probability 0.271 at FT residue 24" SQ Sequence 4313 BP; 750 A; 1412 C; 1488 G; 662 T; 1 other; GCGGTTGGCG CGGAGGCGAA GCATAAGGGC GCGGGCCGAT ATCTCGACCC GCGGCGGTGC 60 AGCGGCGNCG CAACCGGCGC GGATCAACCG GGCAAATCGC CGAACACCTC GCCGATGCGG 120 CGGGCGATGT GCGCGCCGTG GGTGCCCAGG GCGAAGTGGC CGGCGTCGAG CAGTTCCACC 180 TGCGCCTCGG GGTTATCGCG GCGATAGGCC TGCGCGCCCG GCGGGATGAA GAACGGATCG 240 TGCTGGCCCC AGATCACCAG GGTCGGCACG CAGCGTTCGC GGAAGAACTG CTGGAAGCGC 300 GGATACAGCG GCAGGTTGTT GGCGTAGTCC AGGGTCAGGT CGAGCTGGAT GTCGGCGTTG 360 CCGGGGCGCT GCATCAGCAG GTAATCCAGG TGATAGGCCT CCGGCGCGAC CAGGCTGGGG 420 TCGGGCTCGC CGTTCTCGTA CTGCCAACGG GTCGCCTCCA GCGACAGGAA CTGGCGCAGC 480 GCTTCGCGGT TCTCGGCGCT GGGGTCGGCC CAATAGCGGC GCATCGGGTC CCAGGCATCG 540 CCCAGGCCTT CCAGGTAGGC GTTGCCGTTC TGCGAGATCA GTCCGGCCAC GCGCTCGGGC 600 TTGGCCAGGG CCAGGCGCAG GCCGGTCGGG GCGCCGTAGT CGAACACGTA CAGCACGTAG 660 CGCTGCAGGT TCAGCGCGTC GACGAAGGCT TCGAGGGTGC GGCCCAGGTT GTCGAAGTTG 720 TAGACGTAGC CGCGCTGTTC GGGGACTTCG GTGAAGCCGA AGCCGGGCAG GTCCGGGGCG 780 ACGAGGTGGA AGCGGTGGGC GAGTTTGTCG ATCAGCTCGC GGAACATCAG CGAACTGGTC 840 GGGAAGCCGT GCAGCAGCAA CAGGGTCGGG GCGGTCGGAT CGCCGGCCTC GCGATAGAAG 900 ACGCGCACGC CGTCGGCGTC GACGTGGCGG TGGCGGACGG GGAAGTGGGT GGACGACATG 960 GGGAGGCTCC TGGGAATTTT GTAACCCTAA TTCGATATGA ATGAAGGTTA CGAAAAGCCT 1020 AGACTTGGCC TGTGTAACTT GTCAATAGTT ATTTTTGCGG TTACATTGAC AGCTCAGAGG 1080 ACACCGCCCG ATGACTACGC CGACACCGAC CGACTGGCCG CCGCTGATCG CCGGCCAACC 1140 CGCGCTGGAT CTGCTCAACA CGCTGACCCT CGAGGACGGC GCGCTGGTCG AACACCTGGG 1200 CGACGATGCC GCCGCGGCCG CTTGGTTGAG CCGTCTGACC GGCGCCGCGC AGGCGCCGCA 1260 GCCGCAGCTG GCCGAGCGCG CGCGCGAACT GCGCGAGGCG ATCCGTACCG CGGTGCAGGC 1320 GCGCAAACAG GAACAGCCGC TGGAATTGGC GCCGCTCAAC GCGCTGTTGG CGCGCATGCA 1380 CAGTCACTTG GTGCTGGAGC CGGGCGAGGG CGGTCCCGCG CTGCGGCGCG CGGCGGTCGG 1440 CGATCCCGCG TGGCTCGCGC TGGCGCCGCT GGGCGAAGCC GCGGCGCAGT TGTTGGCCGA 1500 GTTGGATTTC GGCTTGGTGC GGCAGTGCGA ACACAGCGAG TGCGTGCTGT GGTTCCACGA 1560 CACGACCAAG TCGCACCGGC GCCGCTGGTG CAGCATGGCG CTGTGCGGGA ACCGGCATAA 1620 GGTCAGCGAG TTTCGCAAGC GACGCGGTGG GTGAGCGGCG TGGGATAATG CGATCGGCAG 1680 CGCTTAGCCG TCGCAGGGAA TCTCATGGAA TCGCATTTCT CGCCGCAGAA CATCGAGGTC 1740 GTGTCGGCGA TGGAGGCGGT CCGTCGCCGC CAGCATATGT ACTTCGATAC CGGCAAGGCG 1800 GATATCGCAT CGGAACTGGC GATGCAGGCG CTTTGCCATG CCGCCGACGA GGCCATGGAC 1860 GGACGCTGTA ACACAGTGTC GGTGCGCGTG TCCGGCTCGC GCGTCGAGGT GCGGTACGAC 1920 TGCGGCATGC CGCTGACTCC CGATCCGTAC GATCCGCAGT GGACCGTGGC CGAGATGTTC 1980 CTGCTCACCT TACGCGGTTG CAGCTCGCGC AAGAAGCACA TCGAGATCGG TTCGGAATTC 2040 TGCGGGATCG GATTGGGCAT CCTGAACGCG GTATGCAGCG AAATGGACGT GGATACCGTC 2100 GATGCCGGGC AGGGCGTGCA CTTGCGCTTC CAGCGCGGCG AACAGATCGG AACCTGCGTC 2160 GTAACGCCGA GCGACCGCCC CGACGGCACT CGAATCGAAT TCGAACTGGA CAACAGCGTG 2220 TTGGCCGAGA CCGCTCTTAG CGAAACAGCG CTCGGCGCAG CCTTGGAGCG CTTGGCGGCG 2280 CGCTTCCCGG GGATAGCCGT TTCTTTGGAT TTTCGCCGCT GACTGCCGCG CTTCTGACGT 2340 TCGACCTTGC CGCGGTTTGC CGGAAACCGC CACTGACCCT GCCGGGCCGG GCCTTTGCTG 2400 GTCCCAACCA ACGGCCCACG ACACCATCCG GCCGCCTGCG CTAGTCTCGG CGGTTTCCAC 2460 CGGGGACCGC ACCACCCATG AAACTCTCCC GCCTGAGCCT GACCCTGGCG CTCGCCGCCG 2520 CGCTGGCCGT TCCTTCCGTT CACGCCGCCG GCGCCGCCGC GGCCAAGGCC AAGCCTGCTG 2580 CCGCCAAGTC CGCCGCCGGC AAGCCCGTGC TCGGCGACTT CGGCGTCGAC CTGAGCGCGC 2640 GCGACACCAG CGTCAAGCCC GGCGACGACT TCAACCGCTA CGTCAGCGGC CATTGGCTGG 2700 TGACTTACCA GTTGAAGGAC TACGAGACCT CCTACGGCTC GTTCAACAAG CTGCGCGACG 2760 ATTCCGAAGC CGACGTGCAC GCGATCATCG AAGAGCTGGC CAAGCAGCAG AACCTGCCGG 2820 CCGGCAGCGA GAAGCAGAAG CTGCGCGATT ACTACGCCAG CTACATGGAC CGCGCCGCGC 2880 GCGACGCTGC CGGGATCGCG CCGCTGCAGC CGGTGCTGGA CAAGATCGCC AAGATCGACT 2940 CGGCCGGTGC GCTGATCGCC GCTTTCGGCG ACACCGACCT GGACGGCACC AGCGCGCCGC 3000 TGCGCTTCGG CGTCGACCTG GACCGCAAGG ATCCGGATCA GTATTTGGTC GGCCTGCGCG 3060 TCGGCGGCCT GGGCCTGCCG GACCGCGATT ACTACCTCAA CCAGGACGCG CGTTTCGTCG 3120 GCATCCGCAC CGCCTATCTC GCCCACATCG AGCGCATGCT CAGCTTCGCC GGCATCAAGG 3180 ACGCCAAGGC GCGCGCGCAG GCCGTGCTGG ATCTGGAAAC CGCGCTGGCC AAGCCGCAGT 3240 GGGAGCGCGC GCAACTGCGC AACCGCGACA AGACCTATAA CGTCTCCAGC TTCGCCGAGC 3300 TGAGCAAGCA GTACCCGGGC TACGACTGGG CCGCGCAGCT CAAGGCGCAG GGCATGCCGG 3360 TGGTCGACAA GGTCAACGTC GCCACGCCGA GCGCGGTGCA GCCGGTGATC GAGGCGGTCG 3420 CCAAGACGCC GCTGCCGGTG TGGCGCGATT ACCTGACCTT CCACGCCGTG CGCAACAACG 3480 CCGGCCTGCT CAGCCGCGAG ATCGACGACG TTGCGTTCGC CTTCAACGGC ACCGTGCTCA 3540 GCGGCCAGAA GGCCCAGCGC GACGACTGGA AGCGCGCGGT CGCCACCGTC ACCGGCAGCG 3600 ACGGCCTGGG CGATGCGATG GGCAAGCTGT ACGTGGAGCG CCACTTCTCG CCGCAGGCCA 3660 AGGCGGCGAT GCAGAAGCTG GTGGAGAACC TGCGCAAGGC ACTGCGCGCC AACATCGAGA 3720 AGATCGACTG GATGGGCGCG GACACCAAGG CCGAGGCCTA CCGCAAGCTC GACAGCTTCC 3780 GGCCCAAGGT CGGCTACCCG GACAAGTGGC GCGACTATTC CAGCGTGACC ATCGTCGCCG 3840 GCGACCTGAT GGCCAACACC CAGCAGCTGC GTCGCTACCA GCGCGCCGAC CAGGTGCGCC 3900 GGATCGGCAC CCGCACCGAC CGCGACGAGT GGTTCATGAC CCCGCAGACG GTCAACGCCT 3960 ACTACAACTC GACCTTCAAC GAGATCGTGT TCCCGGCCGG CATCCTGCAG GCGCCGTTCT 4020 TCGACCTCAA CGCCGACGCG GCGGTCAACT ACGGCGGCAT CGGTGCGGTG ATCGGCCACG 4080 AGATGGGCCA CGGTTTCGAC GACCAGGGCA GCAAGTCCGA TTACGCCGGC ATCCAGCGCA 4140 ACTGGTGGAC CGACCAGGAC CGCAGCCGCT TCGAGCAGCT GACCAAGGCG CTGGGCGCGC 4200 AGTACGACGC GTTCTGCCCG CTGCCGGGCC AGTGCGTCAA CGGCCAGCTG ACCATGGGCG 4260 AGAACATCGG CGACCTCGGC GGCGTGTCGA TGGGCTACAC CGCTTACCAG CTG 4313 // ID Contig1198 standard; DNA; UNC; 4270 BP. XX DE Contig1198.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..4270 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene 2..403 FT /locus_tag="DeVSDRAFT_0068" FT /colour=13 FT CDS 2..403 FT /locus_tag="DeVSDRAFT_0068" FT /product="conserved hypothetical protein" FT /note="SPTR: Q3BTT2 Hypothetical protein. Xanthomonas campestris pv. vesicatoria (strain 85-10)." FT /note="KEGG: xcv:XCV2100 hypothetical protein " FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT ETTDSDETEFRPALAARDGKACKQGEIPDGFYLVGDSEDPQPEFQQAIIAEVEKVTHIAPADASGEIIGSPVVARGVIDY FT PVSELGLCAGITRARYRTTTEVYPDSPRATPEQCNQAQAAAVRAAIDFALARG* FT " FT gene 408..914 FT /locus_tag="DeVSDRAFT_0069" FT /colour=13 FT CDS 408..914 FT /locus_tag="DeVSDRAFT_0069" FT /product="hypothetical protein" FT /note="SPTR: Q4AHB5 Similar to Preprotein translocase subunit SecD. Chlorobium phaeobacteroides BS1." FT /note="COGs: COG0342 Preprotein translocase subunit SecD category=U" FT /note="InterPro IPR000437" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MKTRALAATLALAMLAGASACAPQPPDGPADSLRNAKPVRGDVAFYLAADGDTAGARTFPVLRPYPGQPAQVAVKPVPVI FT ARGQVALVALSVDESGQSALDLQLTEPGAQRLAQVTRDNVGKRLAVVVGAMAVNVATIQGEIPGGRLRVSGLDMADAEAF FT ERELVVAK* FT " FT gene complement(958..1347) FT /locus_tag="DeVSDRAFT_0070" FT /colour=13 FT CDS complement(958..1347) FT /locus_tag="DeVSDRAFT_0070" FT /product="conserved hypothetical protein" FT /note="SPTR: Q98BP1 Mlr5488 protein. Rhizobium loti (Mesorhizobium loti)." FT /note="KEGG: mlo:mlr5488 hypothetical protein " FT /note="COGs: COG0563 Adenylate kinase and related kinases category=F" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT LAPAPGSGVRRPARPRIRAPAWVIDGNYTRCLPQRLERATGLIVLDAATATSLLRYVRRAWFERERRGGLEGAKSRVRWE FT MIHHILFATPAGRRRNRELFERIALPKLRLAGTRELDRFYRSSGLQRPS* FT " FT gene complement(1601..2197) FT /locus_tag="DeVSDRAFT_0071" FT /colour=13 FT CDS complement(1601..2197) FT /locus_tag="DeVSDRAFT_0071" FT /product="hypothetical protein" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MRGANAAWLRGGSFEGQRSIVVARLPPAAMNVVAESERLARLRALPLSPALRAMAEGRLPHPQLWRCQTGKPFYVYRGAE FT APAGPVLIPLWDWNDWVRGVRERPDGLEFVRFDIEMPDEVECLARTEAGLWARLFDALYEDDLELDELEAIARAVDYRYW FT PLQLKSREAAEPHWSGGSAHSHWLQAWTAAIDARAGAE* FT " FT gene complement(2235..3884) FT /locus_tag="DeVSDRAFT_0072" FT /colour=11 FT CDS complement(2235..3884) FT /locus_tag="DeVSDRAFT_0072" FT /product="tyrosinase" FT /note="PFAM: tyrosinase" FT /note="SPTR: Q093B2 Tyrosinase (EC 1.14.18.1). Stigmatella aurantiaca DW4/3-1." FT /note="KEGG: nmu:Nmul_A0920 tyrosinase " FT /note="InterPro IPR002227:IPR006311" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT MHYTRREFLTTAASAAGAAMLPLGSALAAATGAGRAAEPARWRRYDVASPEGQRMLVSYARGIEAMLKLPVDDPRNWFRY FT AFVHFFDCPHGNWWFYVWHRGYIGYFEKIVRELSGDPEFALPYWDWTRHPELPAGMFDGVLSPTDRAYAPFTGNLKLFTD FT YIKPTMAGYFERLDDDQRAQLKLRGYTTFEEAWCDVNGYYAAKQTGLTGNQAFAVTCAARYPSKSNAKLDWRSQFAVSRL FT VVGAGLLPTHFQAESMAQSFTSPVAPSHLVQPASGQKFSILEGYPHNKVHNYIGGVHAIDPGPYGNMTNFLSPVDPIFFL FT HHANMDRLWDVWTRKQLAHGRPILPEGDQAKAFMDEPFLFYVDADGKPVGPSTAGQYVDQRRFDYDYGPGGYEGFSFDAA FT DRRRRLGASAEVDGQLHAGAASLALPAATVRDHQDDAAPLIAEITMERPDELALTREFDVLVNAPDEVTGASADSPYYAG FT TLAFFGPTMPGMQMSHNTTFALPLPKTLRALTQAANAKSAAQLNIRVVPAGPLAAEPVKVQGVSVRPAG* FT " FT misc_feature complement(3783..3848) FT /colour=11 FT /locus_tag="DeVSDRAFT_0072" FT /note="1 probable transmembrane helix predicted by FT TMHMM2.0" FT sig_peptide 408..470 FT /colour=11 FT /locus_tag="DeVSDRAFT_0069" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 1.000) with cleavage site probability 0.215 at FT residue 21" FT sig_peptide complement(3798..3884) FT /colour=11 FT /locus_tag="DeVSDRAFT_0072" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 1.000) with cleavage site probability 0.722 at FT residue 29" SQ Sequence 4270 BP; 614 A; 1445 C; 1595 G; 616 T; 0 other; CGAGACCACC GACAGCGACG AGACCGAGTT CCGTCCGGCG TTGGCCGCGC GCGACGGCAA 60 GGCCTGCAAG CAGGGCGAGA TTCCCGACGG TTTCTATCTG GTCGGCGACA GCGAAGACCC 120 GCAGCCGGAG TTCCAGCAGG CGATCATCGC CGAGGTCGAG AAGGTCACCC ACATCGCCCC 180 GGCCGACGCC AGCGGCGAGA TCATCGGCTC GCCGGTGGTC GCGCGCGGCG TCATCGACTA 240 CCCGGTGAGC GAACTCGGCC TGTGCGCCGG CATCACCCGC GCGCGCTACC GCACCACCAC 300 CGAGGTCTAT CCCGACAGCC CGCGCGCGAC GCCGGAGCAG TGCAACCAGG CCCAGGCCGC 360 GGCGGTGCGC GCGGCGATCG ACTTCGCCCT GGCGCGGGGT TGAGCCGATG AAGACTCGCG 420 CGCTCGCTGC GACGCTCGCG TTGGCGATGC TGGCCGGCGC GAGCGCTTGC GCGCCGCAGC 480 CGCCCGACGG GCCGGCCGAC TCCTTGCGCA ACGCCAAGCC GGTGCGCGGA GACGTCGCCT 540 TCTATCTGGC GGCTGACGGC GACACCGCCG GCGCGCGGAC GTTCCCGGTG TTGCGTCCTT 600 ACCCGGGCCA GCCGGCGCAA GTGGCGGTGA AGCCCGTGCC GGTGATCGCG CGCGGCCAGG 660 TCGCCCTGGT CGCGTTGAGC GTCGACGAAA GCGGCCAAAG CGCGCTGGAT CTGCAATTGA 720 CCGAGCCCGG CGCGCAGCGC CTGGCCCAGG TCACCCGCGA CAACGTCGGC AAGCGCCTCG 780 CCGTGGTGGT CGGCGCGATG GCGGTGAACG TGGCGACGAT CCAGGGCGAA ATCCCCGGCG 840 GGCGCTTGCG CGTGAGCGGC CTGGACATGG CCGACGCGGA GGCGTTCGAG CGCGAGTTGG 900 TGGTCGCCAA GTAAGCCCGG CTGGCGCGTT GCGCCAGCGC GACGGCAGGC GCCGGGGTCA 960 GGACGGCCGT TGCAGCCCCG ATGAGCGATA GAAGCGATCC AGTTCGCGCG TGCCGGCCAG 1020 TCGCAGCTTC GGCAGCGCGA TGCGTTCGAA CAGTTCGCGA TTGCGCCTGC GGCCGGCCGG 1080 CGTGGCGAAC AGAATGTGGT GGATCATCTC CCAGCGCACG CGGCTTTTGG CGCCTTCCAG 1140 CCCGCCGCGG CGCTCGCGCT CGAACCAGGC GCGGCGCACA TAGCGCAGCA GGCTGGTTGC 1200 GGTCGCCGCG TCGAGCACGA TGAGCCCGGT CGCGCGCTCC AGGCGCTGCG GCAGGCAGCG 1260 CGTGTAGTTG CCGTCGATCA CCCAGGCCGG CGCGCGGATG CGCGGTCGTG CAGGGCGACG 1320 AACTCCGCTT CCGGGCGCGG GCGCCAATCG GTATGGGGCA GGTGATGGAC CCGGTCGAGA 1380 TGCACCGCCG GCAGGCCGCG CGCGCGGGCG ATGGCGTCGG CCAGGGTGAT TTGCCGCTGC 1440 CGGACGGCCC GAGGATGCAG ATGCGCGGTC CGAGTTCGTC GAGGGTCATG CGGCGCAGCG 1500 TCGGTGTGCG TGCAGGCAGG CGGAAGACGG ATGCGGCGAC GGTGTCGCCC GCACCGATCT 1560 TAGCAGCGCG CCTGTCGTCG GTTGCGCGTA GCGTCGGCGC TCACTCCGCG CCGGCCCGTG 1620 CATCGATAGC CGCGGTCCAC GCCTGCAGCC AGTGCGAATG CGCCGAACCG CCGCTCCAAT 1680 GCGGCTCAGC CGCCTCGCGG CTTTTCAACT GCAGAGGCCA GTAGCGGTAA TCCACCGCGC 1740 GGGCGATCGC TTCGAGTTCG TCGAGTTCCA GGTCGTCTTC GTACAGCGCA TCGAACAGCC 1800 GTGCCCACAG CCCGGCTTCG GTGCGCGCCA GACATTCGAC CTCGTCGGGC ATTTCGATAT 1860 CGAAACGGAC GAACTCCAGT CCGTCGGGCC GCTCGCGCAC GCCCCGCACC CAGTCGTTCC 1920 AATCCCATAA CGGAATCAAT ACCGGTCCCG CCGGCGCTTC GGCACCGCGA TAGACATAGA 1980 ACGGCTTGCC CGTCTGGCAG CGCCACAGCT GCGGATGCGG CAGTCGGCCT TCGGCCATCG 2040 CCCGCAGGGC CGGCGACAGC GGCAGTGCGC GCAGGCGCGC GAGGCGTTCG GATTCGGCGA 2100 CGACGTTCAT GGCGGCGGGC GGGAGGCGGG CCACGACTAT AGACCGCTGT CCTTCGAACG 2160 AACCACCGCG CAGCCAAGCC GCGTTCGCGC CGCGCATCGC CGCGCGAACG CGGCGATGCG 2220 CGGCGCAGGT GCGCTCATCC GGCCGGACGC ACCGACACGC CCTGCACCTT GACCGGTTCG 2280 GCCGCCAGCG GCCCGGCCGG CACCACGCGG ATGTTGAGCT GCGCCGCGCT CTTGGCGTTG 2340 GCGGCCTGGG TCAGCGCGCG CAAGGTCTTG GGCAAGGGCA GGGCGAAGGT GGTGTTGTGC 2400 GACATCTGCA TGCCCGGCAT GGTCGGGCCG AAGAAGGCCA GGGTGCCGGC GTAGTAGGGG 2460 CTGTCGGCGC TGGCGCCGGT CACCTCGTCC GGCGCGTTGA CCAGCACGTC GAACTCGCGC 2520 GTCAGCGCCA GTTCGTCGGG ACGTTCCATG GTGATCTCGG CGATCAGCGG CGCGGCGTCG 2580 TCCTGATGGT CGCGCACGGT CGCCGCCGGC AGCGCCAGCG ATGCGGCGCC GGCGTGCAGT 2640 TGCCCGTCGA CCTCGGCGCT GGCGCCGAGC CGGCGACGGC GGTCCGCGGC GTCGAAGGAG 2700 AAGCCTTCGT AGCCGCCCGG GCCGTAGTCG TAATCGAACC TGCGCTGGTC GACGTATTGG 2760 CCGGCCGTGG ACGGCCCGAC CGGCTTGCCG TCGGCGTCGA CGTAGAACAG GAACGGTTCG 2820 TCCATGAACG CCTTGGCCTG ATCGCCCTCG GGCAGGATCG GCCGGCCGTG GGCGAGCTGC 2880 TTGCGCGTCC ACACGTCCCA CAGCCGGTCC ATGTTGGCGT GGTGGAGGAA GAAGATCGGA 2940 TCCACCGGCG ACAGGAAGTT GGTCATGTTG CCGTACGGGC CCGGGTCGAT GGCGTGCACG 3000 CCGCCGATGT AGTTGTGGAC CTTGTTGTGC GGATAGCCCT CCAGGATCGA GAACTTCTGT 3060 CCCGACGCCG GCTGGACCAG ATGCGAGGGC GCGACCGGGC TGGTGAAGCT CTGCGCCATC 3120 GATTCGGCCT GGAAGTGGGT GGGCAGCAGA CCCGCGCCGA CCACCAGCCG CGACACCGCG 3180 AACTGGCTGC GCCAGTCCAG CTTGGCGTTG GACTTGCTCG GATAGCGCGC CGCGCAGGTC 3240 ACCGCGAAGG CCTGGTTGCC GGTCAGGCCG GTCTGCTTGG CCGCGTAGTA GCCGTTGACG 3300 TCGCACCAGG CCTCTTCGAA GGTGGTGTAG CCGCGCAGCT TGAGTTGCGC GCGCTGGTCG 3360 TCGTCGAGGC GCTCGAAGTA GCCGGCCATG GTCGGCTTGA TGTAGTCGGT GAACAGCTTG 3420 AGGTTGCCGG TGAACGGCGC GTAGGCGCGG TCGGTCGGCG AGAGCACGCC GTCGAACATG 3480 CCCGCCGGCA GCTCGGGATG GCGGGTCCAG TCCCAGTACG GCAGGGCGAA CTCGGGATCG 3540 CCGCTGAGCT CGCGCACGAT CTTCTCGAAA TAGCCGATGT AGCCGCGGTG CCAGACGTAG 3600 AACCACCAGT TGCCGTGCGG GCAGTCGAAG AAATGCACGA AGGCGTAGCG GAACCAGTTG 3660 CGCGGGTCGT CGACCGGCAG CTTGAGCATC GCCTCGATGC CGCGCGCGTA GCTGACGAGC 3720 ATCCGCTGCC CCTCGGGGCT GGCGACGTCG TAGCGGCGCC AGCGCGCCGG CTCGGCGGCG 3780 CGGCCGGCGC CGGTGGCGGC GGCCAGGGCC GAGCCCAGCG GCAGCATCGC GGCGCCGGCG 3840 GCGCTCGCGG CGGTGGTCAG AAACTCGCGG CGGGTGTAAT GCATCCTGCG CTCCTCAGTG 3900 GGTGGCGGTG CGGGCGCGGG CGGGTCGCGG CGGGGCGCGC GCGAACGAAC GGCCGGACGC 3960 CGTCGGCGCC GCGCGGTGCG TGCGTTGCGA TTCCCCTGTC CGGTCGGCCG TCCGGCGCGC 4020 CGGCCGCAGC GATGCGGCGT CAATGTGAAC GCGGCGGCGG TGCGGCGAAG GCCAGCGCGG 4080 CGGCGCCGGT CGCGCGATCT GCTAGGCGTT TCACAAAAGC CTGAACGGGC GGCTGCGGCA 4140 GCGGGCTTGC CGCTGCCGCG CCGATACGCT GGCGACGGTC GCAAGCGGAC CGATCTGATC 4200 GCCGACCGGT ACCACGGGCC GGCACGACCC CATCCACCCC GCAGCGGGCA GTGGGGCGGC 4260 CGCGACCCGG 4270 // ID Contig1201 standard; DNA; UNC; 5523 BP. XX DE Contig1201.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..5523 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene 71..1447 FT /locus_tag="DeVSDRAFT_0079" FT /colour=16 FT CDS 71..1447 FT /locus_tag="DeVSDRAFT_0079" FT /product="adenylosuccinate lyase" FT /note="TIGRFAM: adenylosuccinate lyase" FT /note="PFAM: fumarate lyase; Adenylosuccinate lyase C-terminal domain protein" FT /note="SPTR: Q5H169 Adenylosuccinate lyase. Xanthomonas oryzae pv. oryzae." FT /note="KEGG: xom:XOO_1930 adenylosuccinate lyase " FT /note="COGs: COG0015 Adenylosuccinate lyase category=F" FT /note="InterPro IPR000362:IPR004769:IPR013539" FT /codon_start=1 FT /transl_table=11 FT /colour=16 FT /translation=" FT MSADSQTTLLALSPLDGRYAGKVDALRPIFSEFGLIKARVKVEVEWLLALAAEPGIAELAPFSDAASARLRALADGLSVA FT DAARVKEIERTTNHDVKAVEYLIKERLKDDAELGPALEFVHFACTSEDINNLSYALMLNQARQDVLLPKLDELIQKLRAM FT AHEHAALPMLSRTHGQTASPTTVGKELANVVARLQRQGETLAGAIMPGKINGAVGNYNAHVAAYPDIDWTAFSQRFVASL FT GLDWQPYTTQIEPHDGIAEVCDAQRRIDTICVDLCRDVWGYISLGYFKQAVKAGEVGSSTMPHKVNPIDFENAEGNFGIA FT NALFEHFAAKLPISRWQRDLTDSTVLRALGTAFGHALIGFDALLRGLGKLSANPERLAADLDASWEVLAEAVQTVMRRYG FT LPNPYEQLKALTRGHGITEASMREFIASLELPAADKQRLLAMTPGSYTGLAERLAREI* FT " FT gene 1557..2690 FT /locus_tag="DeVSDRAFT_0080" FT /colour=11 FT CDS 1557..2690 FT /locus_tag="DeVSDRAFT_0080" FT /product="Beta-lactamase" FT /EC_number="3.5.2.6" FT /note="PRIAM: Beta-lactamase" FT /note="PFAM: beta-lactamase domain protein" FT /note="SPTR: Q2G7J0 Beta-lactamase-like precursor. Novosphingobium aromaticivorans (strain DSM 12444)." FT /note="KEGG: nar:Saro_1743 beta-lactamase-like " FT /note="COGs: COG0491 Zn-dependent hydrolases including glyoxylases category=R" FT /note="InterPro IPR001279" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT LRRSYSRCAADSFLPLGAARVANRQPRRNPHPTRSAGRNKNPPCRCHNFFLIRAASEYEIVLATSRIRIARMRSFTGWLP FT VSIASLLLAACASAPPHAAKAAGAGACPADPNWDEPTAPRHIFGNTWYVGTCAISAILITSDAGHILIDGVTDTAAPNIE FT ANIRALGFDPGQVRYILNSHEHIDHAGGIARLARDTGARVVAREPAATALERGKADRGDPQFLSVPGFPPVANVQRIDDG FT GTLRLGALALTAHATPGHTAGATSWTWRSCDEAGQCRDIAYADSLTPFSDKVYRFSDDAAHPGALAAYRRSIETVAALPC FT DILLTPHPGASDLLERTGPHPAKPLVDAGACRAYAATGAAKLDARLEQERAQPAPAR* FT " FT gene 2953..3348 FT /locus_tag="DeVSDRAFT_0081" FT /colour=11 FT CDS 2953..3348 FT /locus_tag="DeVSDRAFT_0081" FT /product="Glyoxalase/bleomycin resistance protein/dioxygenase" FT /note="PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase" FT /note="SPTR: A1K8S8 Lactoylglutathione lyase (EC 4.4.1.5). Azoarcus sp. (strain BH72)." FT /note="KEGG: azo:azo2616 lactoylglutathione lyase " FT /note="COGs: COG2764 Uncharacterized protein conserved in bacteria category=S" FT /note="InterPro IPR004360" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT MQLLINIDVPDLDAALAFYTRAFGLHVGRRIGDAVELLGAPSPFYLLHKPEGSLGAGQQARGYARHWTPLHLDIVVDDLD FT AALASALAAGARQEGEARKASWGRIVQLSDPFGHGWCLLQFLGRGYDEIAQ* FT " FT gene 3547..4851 FT /locus_tag="DeVSDRAFT_0082" FT /colour=13 FT CDS 3547..4851 FT /locus_tag="DeVSDRAFT_0082" FT /product="Cupin 4 family protein" FT /note="PFAM: Cupin 4 family protein" FT /note="SMART: transcription factor jumonji, jmjC domain protein" FT /note="SPTR: Q3BVA2 Hypothetical protein. Xanthomonas campestris pv. vesicatoria (strain 85-10)." FT /note="KEGG: xcv:XCV1580 hypothetical protein " FT /note="COGs: COG2850 Uncharacterized conserved protein category=S" FT /note="InterPro IPR003347:IPR013109" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MATRPLDPSARKPARKPGQKAGEKAAPALVVDAAAHPPLGMPAQTFLTDYWQKRPLLIRNAFPGLQSPLQPEDLAGLACE FT EGALARLIQHDRARDHYSVRHGPFEESEFPGLPQQDWTLLVQDVDKWDADVAALLPAFSFLPRWRIDDIMVSFAAPGGSV FT GAHVDQYDVFLLQAQGHRRWQIDARPNPPQGFRADAELKLLREFEPSHDWVLGPGDMLYLPPGVPHHGVAEDACLTFSVG FT MRAPSAAELMGDYIDTLAADADEALRYNDPDLAPPRDPNEIDAAAMERVVQGLNALRMNDPDRLGDWFGRFITVYRAAGE FT VSAGGAPAPSRIELDFALQHGATLWRHPWSRMAWRRAHARGRAARLYVSGQEYALPAKDAQALAAAAEIDLAGYSALSDT FT GRACVLELVAGGHYRLGRDDEADDEGYACGDEEE* FT " FT misc_feature 1776..1844 FT /colour=11 FT /locus_tag="DeVSDRAFT_0080" FT /note="1 probable transmembrane helix predicted by FT TMHMM2.0" SQ Sequence 5523 BP; 797 A; 2095 C; 1850 G; 781 T; 0 other; AGGGGGTGCC CCGGCACGTC TTGGCCGCAG GGGGTAGAAT GGAAGGCTGT TTTCCTGCCC 60 ACCGCGTGCC ATGTCCGCCG ACTCCCAGAC CACCCTGCTC GCCCTGTCCC CGCTCGATGG 120 CCGCTATGCC GGCAAGGTCG ATGCGCTGCG GCCGATTTTC TCCGAATTCG GCCTGATCAA 180 GGCGCGGGTC AAGGTCGAGG TGGAATGGCT GCTGGCGCTG GCCGCCGAAC CGGGCATCGC 240 CGAGCTGGCG CCGTTTTCCG ACGCTGCCAG CGCGCGCCTG CGCGCGCTGG CCGACGGTTT 300 GTCGGTGGCC GACGCGGCGC GGGTCAAGGA GATCGAGCGC ACCACCAACC ACGACGTCAA 360 GGCGGTGGAG TACCTAATCA AGGAACGCCT CAAGGACGAC GCCGAACTCG GTCCGGCGCT 420 GGAATTCGTC CACTTCGCCT GCACCAGCGA AGACATCAAC AACCTCAGCT ACGCGCTGAT 480 GCTCAACCAG GCGCGCCAGG ACGTGCTGCT GCCCAAGCTC GACGAACTGA TCCAGAAGCT 540 GCGCGCGATG GCCCACGAGC ACGCGGCGCT GCCGATGCTC TCGCGCACCC ACGGCCAGAC 600 CGCTTCGCCG ACCACGGTGG GCAAGGAACT GGCCAACGTG GTCGCGCGCC TGCAGCGTCA 660 GGGCGAAACC CTCGCCGGCG CGATCATGCC GGGCAAGATC AACGGCGCGG TCGGCAACTA 720 CAACGCCCAT GTCGCCGCGT ATCCCGATAT CGACTGGACC GCGTTCTCGC AGCGCTTCGT 780 CGCTTCGCTG GGCCTGGACT GGCAGCCCTA CACCACTCAG ATCGAGCCGC ACGACGGCAT 840 CGCCGAGGTC TGCGACGCGC AGCGCCGCAT CGACACGATC TGCGTGGACC TGTGCCGCGA 900 CGTGTGGGGC TACATCTCGC TGGGTTACTT CAAGCAGGCC GTCAAGGCCG GTGAAGTCGG 960 CAGCTCGACC ATGCCGCACA AGGTCAACCC GATCGACTTC GAAAACGCCG AAGGCAACTT 1020 CGGCATCGCC AACGCGCTGT TCGAGCATTT CGCCGCCAAG CTGCCGATCA GCCGCTGGCA 1080 GCGCGACCTC ACCGACTCGA CCGTGCTGCG CGCGCTCGGC ACCGCCTTCG GCCACGCCCT 1140 GATCGGCTTC GACGCGCTGC TGCGCGGGCT GGGCAAGCTC AGCGCCAACC CCGAGCGGCT 1200 GGCGGCCGAT CTGGACGCGT CGTGGGAAGT GCTGGCCGAA GCCGTGCAGA CGGTGATGCG 1260 CCGCTACGGC CTGCCCAACC CTTACGAACA GCTCAAGGCG CTGACCCGCG GCCACGGCAT 1320 CACCGAGGCC TCGATGCGCG AGTTCATCGC CTCGCTGGAG TTGCCGGCCG CAGACAAGCA 1380 GCGCCTGCTG GCGATGACGC CGGGCAGCTA CACCGGCCTG GCCGAGCGGC TGGCGCGGGA 1440 AATCTGATCC TGCGGCGGGG CGCGTTCTTG CGCCCCGCTG GCTTCGCAGG CGCCGCGGCT 1500 GCCAAGCCGC AACTACGGCG AAACCTTCGC CGTTATCGCA TGGGCGCGGT CGCGGCTTGC 1560 GCCGCTCCTA CAGTCGCTGC GCCGCGGATT CGTTTCTCCC TCTAGGAGCG GCGCGAGTCG 1620 CGAATCGGCA ACCACGGCGC AACCCGCATC CCACGCGCAG CGCGGGCAGA AACAAAAATC 1680 CGCCTTGCCG TTGCCACAAT TTCTTTTTGA TCCGCGCCGC ATCCGAATAC GAGATAGTGC 1740 TGGCCACTTC TCGGATACGG ATTGCGCGCA TGCGTTCGTT CACCGGGTGG CTGCCCGTCT 1800 CCATCGCTTC GTTGCTGCTC GCCGCCTGCG CGAGCGCGCC GCCGCACGCC GCCAAGGCCG 1860 CTGGCGCCGG TGCTTGCCCG GCCGATCCGA ACTGGGACGA ACCCACCGCG CCGCGCCACA 1920 TCTTTGGCAA TACCTGGTAC GTCGGCACCT GCGCGATCAG CGCGATCCTG ATCACTTCCG 1980 ACGCCGGCCA CATCCTTATC GACGGCGTCA CCGACACCGC TGCGCCCAAC ATCGAAGCCA 2040 ACATCCGAGC GCTCGGCTTC GATCCCGGCC AGGTGCGCTA CATCCTCAAT TCGCACGAGC 2100 ACATCGACCA CGCCGGCGGC ATCGCCCGGC TGGCGCGCGA CACCGGCGCG CGCGTGGTCG 2160 CGCGCGAGCC GGCGGCGACC GCGCTGGAAC GCGGCAAGGC CGACCGCGGC GATCCGCAGT 2220 TCCTCAGCGT GCCCGGCTTT CCGCCGGTAG CGAACGTGCA GCGCATCGAC GACGGCGGCA 2280 CGCTGCGGCT CGGCGCGCTG GCGCTGACCG CGCACGCCAC GCCGGGCCAT ACCGCCGGCG 2340 CGACCAGTTG GACCTGGCGC TCGTGCGACG AGGCCGGCCA GTGCCGCGAC ATCGCCTATG 2400 CCGACAGCCT CACGCCCTTC AGCGACAAGG TCTACCGCTT CAGCGACGAC GCCGCGCATC 2460 CCGGCGCGCT GGCGGCGTAC CGGCGCAGCA TCGAGACCGT CGCGGCGCTG CCCTGCGACA 2520 TCCTGCTGAC CCCGCATCCG GGCGCCAGCG ATCTGCTCGA ACGCACCGGG CCGCATCCGG 2580 CCAAGCCGCT GGTGGATGCC GGCGCCTGCC GCGCCTATGC CGCCACCGGC GCGGCCAAGC 2640 TCGATGCGCG CCTGGAGCAG GAGCGCGCCC AGCCTGCGCC GGCGCGCTGA GTCGCAACGC 2700 GGCCGGTCGC CGCCTTTGGG CGGTGGCCGT TGCCGCGCTT GCGTCGCACG ACGGCGGCTT 2760 CATCGCAACG CGCGCGGCGC CCGTGCGGTG CGCACTCCGA TCCGATCGGT TCCGATGCGA 2820 TTACGCCCCG CTCCGTCGCC GATCGCAGCG CTGCACAGCC GAACCGGCAA GCATTCCCCC 2880 TCCACCGCCG CGACCACGCC GCCTTAGCAA CCGCCCCCGC ACACTGCGCG CATTCGTCCG 2940 CGGAGGCCTG CGATGCAGTT GCTGATCAAT ATCGACGTCC CCGACCTCGA CGCCGCGCTG 3000 GCGTTCTACA CCCGCGCCTT CGGCCTGCAC GTCGGGCGCC GCATCGGCGA TGCGGTGGAA 3060 CTGCTCGGCG CGCCGTCGCC GTTCTATCTG CTGCACAAGC CCGAGGGCTC GCTCGGCGCC 3120 GGCCAGCAGG CGCGCGGTTA TGCGCGGCAC TGGACGCCGC TGCATCTGGA CATCGTGGTC 3180 GACGACCTCG ACGCCGCCCT GGCCAGCGCG CTGGCCGCCG GCGCGCGCCA GGAGGGCGAG 3240 GCGCGCAAGG CCAGCTGGGG CCGGATCGTG CAGTTGTCCG ATCCGTTCGG GCACGGCTGG 3300 TGCCTGCTGC AGTTCCTCGG CCGCGGCTAC GACGAAATCG CGCAGTGAAC CGCCTCGCCC 3360 GCTGCCGGCC CCGGGCGCCC GCGCGGGCGT GCGACGCGAC GTGCGACCGA CGTCTCAACC 3420 CCGCATTCGC CTGAGGGATC GCTGCGGCCG AAGCGACGCC GCCGCGACCC GGTCCGCGCC 3480 GCCTGCGCCC GCGATGAGCG ACAATATCGC TTTCATATCC ACGCACCGCC GCCGCGCCGA 3540 ACCGCCATGG CCACCCGCCC GCTCGATCCG TCCGCCCGCA AGCCCGCCCG CAAGCCTGGC 3600 CAAAAGGCCG GCGAAAAAGC CGCCCCCGCC CTCGTCGTCG ATGCCGCCGC GCATCCGCCG 3660 CTGGGCATGC CGGCGCAGAC CTTCCTCACC GACTACTGGC AAAAACGCCC GCTGCTGATC 3720 CGCAACGCCT TCCCCGGCCT GCAATCGCCG CTGCAGCCCG AAGACCTGGC CGGTTTGGCC 3780 TGCGAGGAAG GCGCGCTGGC GCGGCTGATC CAGCACGACC GCGCGCGCGA TCATTATTCG 3840 GTGCGGCACG GGCCGTTCGA GGAATCCGAA TTCCCGGGCC TGCCGCAGCA GGACTGGACT 3900 CTGCTCGTGC AGGACGTGGA CAAGTGGGAC GCCGACGTCG CCGCCTTGCT GCCGGCGTTC 3960 TCGTTCCTGC CGCGCTGGCG CATCGACGAC ATCATGGTGT CCTTCGCCGC GCCCGGCGGT 4020 TCGGTCGGCG CCCACGTCGA TCAGTACGAC GTGTTCCTGC TGCAGGCCCA GGGCCACCGG 4080 CGCTGGCAGA TCGACGCCAG GCCCAACCCG CCGCAGGGTT TCCGCGCCGA CGCCGAACTC 4140 AAGCTGCTGC GCGAATTCGA ACCCAGCCAC GACTGGGTGC TCGGCCCCGG CGACATGCTC 4200 TACCTGCCGC CGGGCGTGCC GCACCACGGC GTCGCCGAAG ACGCCTGCCT GACCTTCTCG 4260 GTCGGCATGC GCGCGCCGTC GGCGGCCGAG CTGATGGGCG ACTACATCGA CACCCTGGCT 4320 GCCGACGCCG ACGAGGCGCT GCGCTACAAC GATCCGGACC TGGCCCCGCC GCGCGATCCC 4380 AACGAAATCG ACGCGGCGGC GATGGAGCGC GTGGTGCAGG GCTTGAACGC GCTGCGCATG 4440 AACGACCCGG ACCGCCTCGG CGACTGGTTC GGCCGCTTCA TCACCGTCTA CCGCGCCGCC 4500 GGCGAAGTGT CCGCGGGCGG CGCGCCGGCG CCGTCGCGGA TCGAGCTGGA CTTCGCCCTG 4560 CAGCACGGCG CCACCCTGTG GCGCCACCCG TGGTCGCGCA TGGCCTGGCG CCGCGCCCAC 4620 GCCCGCGGCC GCGCCGCGCG CCTGTACGTG AGCGGCCAGG AATACGCGCT GCCGGCCAAG 4680 GACGCGCAGG CGCTGGCGGC GGCGGCCGAA ATCGATCTGG CCGGCTATTC GGCCCTGTCC 4740 GACACCGGCC GCGCCTGCGT GCTGGAGCTG GTCGCCGGCG GCCATTACCG CCTCGGCCGC 4800 GACGACGAGG CCGACGACGA GGGCTACGCC TGCGGAGACG AAGAGGAATG AGCCAGGCCA 4860 AGCCCGCCGG TTTTCGCGTG GTCGCGGTCG AGGACTACGC CGCCGCCCGG CCGGCCCTGC 4920 GCGCGGTGCG CGAGGCGGTG TTCGTGCGCG AGCAGAACGT GCCGCTGGAA CTGGAGCTGG 4980 ACGCCGAGCG CGACCCGCAA TGCCAGCACG TGCTGGCCTT CGACGCCGAC GGCGAGCCGA 5040 TCGGCACCGG CCGGCTCACC CCGGACCGGC GCATCGGGCG CATGGCGGTG CTGTCCGCGT 5100 GGCGCGGCCG CGGCGTCGGC GAGGCGCTGC TGGAGGCGCT GGTCGCGCGC GCCCGCGCGC 5160 TGGGCTGGCG CGAGGTCTCG CTGCACAGCC AGGCCAGCGC GATCGGTTTC TACGCCCGCC 5220 AGGGTTTCCT GCCGTTCGGG CCGCGCTTCG AAGAGGCTGG CGGGATCGAG CATCTGGCGA 5280 TGTATCGCCT GCTCGGCGCG GCCAATCCGG TCGACGGCCG CGAGGCCGCG GCGGCGGCGC 5340 TGACCGGCCT GCTGGCCCAG GCCCGGCGCG CGTTGTGGAT CTACAGCCGC GAGCTCGACC 5400 CCGGCCTGCT CGACCGCGCC GACGCGCTGG CGGCGCTGCG CCGCTTCGCC GTCGACGGCG 5460 GCCAGGTGCG CGTGCTGCTG CACGACCCGG CCGAGCCGCA GCGCGCGCTG GCGCCGCTGA 5520 TCG 5523 // ID Contig1207 standard; DNA; UNC; 3949 BP. XX DE Contig1207.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..3949 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene 2..922 FT /locus_tag="DeVSDRAFT_0083" FT /colour=13 FT CDS 2..922 FT /locus_tag="DeVSDRAFT_0083" FT /product="conserved hypothetical protein 698" FT /note="PFAM: conserved hypothetical protein 698" FT /note="SPTR: A0Y3K2 Conserved inner membrane protein. Alteromonadales bacterium TW-7." FT /note="KEGG: pat:Patl_0115 conserved hypothetical protein 698 " FT /note="COGs: COG2855 membrane protein category=S" FT /note="InterPro IPR004630" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT GRRAQRADLAIVLGIVVGNTAFPAIAGKVGSGVDFSKAMLLRAGIVLYGFRVTFQEIAGVGAAGLAVDIVVVAGVFCLAT FT WLGTRWLKLDRETSMLIGAGSAICGAAAVMATEPVVKGQAHKVSVAVATVVVFGTVGMFVYPWAYPYLGLSEHAYGVFAG FT STIHEVAQVVVAGRAVSEQAASAAVIEKMLRVMLLAPFLLILSSRLGAGGEAGARRSKIVIPWFALLFVAVSGINSLHLL FT PAAWKAAVIQIDTVLLAMAMAALGLRTHIGAIKQAGAKPMLLAAILFATLTVGGYALNVGAAKLFG* FT " FT gene 1166..2662 FT /locus_tag="DeVSDRAFT_0084" FT /colour=13 FT CDS 1166..2662 FT /locus_tag="DeVSDRAFT_0084" FT /product="hypothetical protein" FT /note="SPTR: Q3BWR8 Putative secreted protein precursor. Xanthomonas campestris pv. vesicatoria (strain 85-10)." FT /note="KEGG: xcv:XCV1064 putative secreted protein " FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MCDAPRVSPRTPPLRARIAPHPPCLSSVAFALPRRRRCCAARPARSDPAAAAAFDSFIVAALFGVRHAYAQDHPGSVHYR FT RHRGVGEPGRRAVERDTGVVPGAIAAPGRGGDRQRTGQRQRHVARQDRAMGRGGVGGPQAAVRRAARADAEPARGRAHAH FT APGQVVPHARRRYGLVGRRPAAGQRPAPARRAAAVDRAVRVRGERVNGQIVAASGEVYELLTSENGAQQYLVKRDPASLE FT GADDTPAHSDLPAQPDRAPAARPAANALLADTVIRVLQVYTPEAVTELGGQNSANDRAAFFIAQSNTAFANNVLPVRFES FT AGVRFASQGQATNVSDTLLSRIRVTNDGWYDAYSTTERNSTAADLVTLVVRDGLQTSGGALLCGQAAAIGANAANGFFVQ FT NHTCSTFTFVHEAAHLFGARHDNDPTTTPFSYGHGYVNTAGNFRTIMAVNSNPQPRIGYFSTIDQSYVSGGVSRPLGTST FT RDNERVMRERAAAIAAFR* FT " FT gene complement(3171..3947) FT /locus_tag="DeVSDRAFT_0085" FT /colour=10 FT CDS complement(3171..3947) FT /locus_tag="DeVSDRAFT_0085" FT /product="spermidine synthase" FT /note="TIGRFAM: spermidine synthase" FT /note="PFAM: Spermine synthase" FT /note="SPTR: Q4UPN0 Spermidine synthase (Putrescine aminopropyltransferase). Xanthomonas campestris pv. campestris (strain 8004)." FT /note="KEGG: xcb:XC_3954 spermidine synthase " FT /note="COGs: COG0421 Spermidine synthase category=E" FT /note="InterPro IPR001045" FT /codon_start=1 FT /transl_table=11 FT /colour=10 FT /translation=" FT KLDEVQSPFQKIEIFETTDWGNLMLIDGAVMLTTRDNFLYHEMMSHPALFTHAAPKNVVIIGGGDCGTLREVLKHPGVEE FT AVQCDIDEQVTRMAEKWFPELCDSNADKRAQLLFDDGIAYMANRPAGSVDLIIVDSTDPVGPAEGLFNKAFYDSCFRALR FT EDGILVQQSESPLMLLKLIQEMRTDMGKAGFQTFKTLPFPQPCYPTGWWSCTLARKAGGFEFRQDDAQAKGFATKYYNAG FT IHHGALSTPAFVAQALGE* FT " FT misc_feature order(29..97,170..238,281..349,368..436,464..532,569..628, FT 656..724,743..811,839..907) FT /colour=11 FT /locus_tag="DeVSDRAFT_0083" FT /note="9 probable transmembrane helices predicted by FT TMHMM2.0" SQ Sequence 3949 BP; 583 A; 1334 C; 1371 G; 661 T; 0 other; AGGCCGCCGG GCTCAGCGCG CTGACCTGGC CATCGTGCTG GGCATCGTGG TCGGCAACAC 60 CGCGTTCCCG GCCATCGCCG GCAAGGTCGG CAGCGGCGTG GACTTCAGCA AGGCCATGCT 120 GCTGCGCGCG GGCATCGTGC TGTACGGGTT CCGGGTCACC TTCCAGGAAA TCGCCGGGGT 180 CGGCGCGGCC GGGCTGGCGG TGGACATCGT CGTGGTCGCC GGAGTGTTCT GCCTGGCCAC 240 CTGGCTGGGC ACGCGCTGGC TCAAGCTCGA CCGCGAGACC TCGATGCTGA TCGGCGCCGG 300 CAGCGCGATC TGCGGCGCGG CGGCGGTGAT GGCGACCGAG CCGGTGGTCA AGGGCCAGGC 360 GCACAAGGTG TCGGTGGCGG TGGCGACGGT GGTGGTGTTC GGCACCGTCG GCATGTTCGT 420 GTACCCGTGG GCGTATCCCT ACCTGGGCCT GAGCGAGCAT GCCTACGGCG TGTTCGCCGG 480 CTCGACCATC CACGAGGTGG CGCAGGTGGT GGTCGCCGGG CGCGCGGTGA GCGAGCAGGC 540 GGCGTCGGCG GCGGTGATCG AGAAGATGCT GCGGGTGATG CTGCTGGCGC CGTTCCTGCT 600 GATCCTGTCC TCGCGCCTGG GCGCGGGCGG CGAGGCCGGC GCGCGGCGCT CGAAGATCGT 660 GATCCCATGG TTCGCGCTGC TGTTCGTCGC GGTCAGCGGG ATCAATTCGC TGCACCTGCT 720 GCCGGCGGCG TGGAAGGCGG CGGTGATCCA GATCGACACC GTGCTGCTGG CGATGGCGAT 780 GGCCGCGCTG GGCCTGCGCA CCCACATCGG CGCGATCAAG CAGGCCGGCG CCAAGCCGAT 840 GCTGCTGGCG GCGATCTTGT TCGCGACGCT GACGGTGGGC GGCTATGCGC TCAACGTCGG 900 CGCGGCGAAG TTGTTCGGAT GATGCTTTTG TAGGAGCTGC GACCGCGACA TGACGCTTGC 960 GTCGTAACCG CGGTGTCGCG GTCGCAGCTT GCGCAGCTCC TACAGTCGTA CTGCGAATCG 1020 ACCCCGCGAA CTGCGGGGTT TTTCTTTGGC GCCGTCCGCG CCGGTTCGCG TCCACAGCCA 1080 ATGCAGTCCA TATGAGTGCG TGTCGTGCGG ATCGGCCGCG CGTGCCGCGC ATCCGCGCTG 1140 CGGCGATAGT CGTGCAAATC TGTGAATGTG TGATGCGCCG CGTGTTTCGC CGCGCACGCC 1200 GCCCTTGCGC GCTCGGATCG CGCCCCATCC CCCGTGCCTA AGCTCAGTTG CGTTCGCGCT 1260 GCCGCGTCGT CGCCGATGCT GTGCGGCGAG GCCGGCGCGA TCCGATCCGG CGGCTGCGGC 1320 CGCTTTCGAT TCCTTCATCG TTGCGGCACT TTTCGGGGTT AGACACGCAT ATGCACAAGA 1380 CCATCCTGGT AGCGTCCATT ACCGTCGCCA TCGCGGCGTC GGCGAGCCTG GCCGGCGCGC 1440 AGTCGAGCGC GACACCGGAG TTGTTCCAGG CGCAATCGCC GCGCCTGGCC GCGGCGGCGA 1500 CCGCCAACGT ACCGGCCAGC GTCAACGGCA TGTTGCGCGC CAAGACCGCG CAATGGGCCG 1560 CGGCGGTGTC GGTGGACCGC AAGCTGCTGT CCGGCGCGCA GCGCGAGCTG ACGCTGAGCC 1620 TGCCCGAGGG CGCGCGCATG CACATGCGCC TGGCCAAGTC GTACCGCACG CCCGCAGGCG 1680 ATACGGTCTG GTCGGGCGCC GACCGGCTGC AGGCCAACGG CCAGCTCCAG CTCGGCGCGC 1740 AGCCGCCGTC GACCGCGCTG TTCGGGTGCG CGGCGAGCGC GTCAACGGAC AGATCGTCGC 1800 CGCCAGCGGG GAGGTCTACG AACTGCTGAC CTCCGAGAAC GGCGCGCAGC AGTACCTGGT 1860 CAAGCGCGAT CCGGCCAGCC TGGAAGGCGC CGACGACACG CCCGCGCACT CCGATCTGCC 1920 GGCGCAGCCC GATCGCGCCC CCGCCGCGCG CCCGGCGGCG AACGCGCTGC TGGCCGACAC 1980 GGTCATCCGC GTGCTGCAGG TCTATACCCC GGAAGCGGTG ACCGAACTGG GCGGACAGAA 2040 CTCGGCTAAC GACCGCGCCG CGTTCTTCAT CGCCCAGTCC AATACCGCGT TCGCCAACAA 2100 TGTCCTGCCG GTGCGCTTCG AAAGCGCCGG GGTGCGCTTC GCCAGCCAGG GGCAGGCGAC 2160 CAACGTCTCC GATACGCTGC TCTCGCGCAT CCGGGTCACC AACGACGGCT GGTACGACGC 2220 GTATTCGACC ACCGAACGCA ACAGCACCGC CGCCGACCTG GTGACCCTGG TCGTGCGCGA 2280 CGGCCTGCAG ACCAGCGGCG GCGCGCTGCT GTGCGGCCAG GCCGCGGCGA TCGGCGCCAA 2340 CGCCGCGAAC GGCTTCTTCG TGCAGAACCA CACCTGCAGC ACCTTCACCT TCGTGCACGA 2400 AGCCGCGCAC CTGTTCGGCG CCCGCCACGA CAACGACCCG ACCACCACGC CGTTCTCCTA 2460 CGGCCACGGC TACGTCAACA CGGCGGGCAA TTTCCGCACG ATCATGGCGG TGAACTCGAA 2520 TCCGCAGCCG CGCATCGGCT ACTTCTCGAC CATCGATCAG AGCTACGTGT CGGGCGGCGT 2580 GAGCCGGCCG CTGGGCACCA GCACGCGCGA CAACGAGCGG GTCATGCGCG AACGCGCGGC 2640 GGCGATCGCG GCGTTCCGCT GAGTTTGCCC GGGTAAGGCG GCGGCCGGAG GGCATCGCCC 2700 CGAGGCCGCT GTTGTCGATT CGTGCGAAGC GCTGCTGTCG TCGTGCCTGC GCAGGTGGGC 2760 GTGCAGGGCT TTATCGCGAC ATGGCGCTGA AGTCTCTGGA TCCCCGCCTC CGCGGGGATG 2820 ACGGCATGGA GCGGTGCGGT GAAACCCGCC TGCCTCGAAA CCCACCTGTC GTCATGCCCG 2880 CGAAGGCGGG CATCCAGGGC TTCACCGCGA CAGGACTCTG AAGTCTCTGG ATCCCCGCTT 2940 TCGCGGGGAT GACGATCTGG GAGAGGCGCG ACGAAACTCA CCTGCCGCGC AACCCACCTA 3000 TCGTCATGCC CGCGCAGGCG GGCATCCAGG GCTTCATCGC GACTGGGCTC TAAAGTCTTC 3060 GGATCCCCAC GTTTGCGGGG ATGACGGCAT GCAGACTCGC AGCTCCTACC GCCGCACTAC 3120 GAAAAAGCCC CGCGAGTGCG GGGCTTTTTT CGACGAAGCT CGCAGACGCT TTACTCGCCC 3180 AGCGCCTGCG CCACGAACGC CGGGGTCGAC AGCGCGCCGT GGTGGATGCC GGCGTTGTAG 3240 TACTTGGTCG CGAAACCCTT GGCCTGCGCA TCGTCCTGGC GGAACTCGAA GCCGCCGGCC 3300 TTGCGCGCGA GCGTGCAGCT CCACCAACCG GTCGGGTAGC ACGGCTGCGG GAACGGCAGG 3360 GTCTTGAAGG TCTGGAACCC GGCCTTGCCC ATGTCGGTGC GCATTTCCTG GATCAGCTTG 3420 AGCAGCATCA GCGGCGATTC GGACTGCTGC ACCAAGATGC CGTCCTCGCG CAGAGCGCGG 3480 AAGCAGCTGT CGTAGAAGGC CTTGTTGAAC AGGCCCTCGG CCGGGCCGAC CGGGTCGGTG 3540 GAGTCGACGA TGATGAGATC GACGCTGCCG GCCGGACGGT TGGCCATGTA GGCGATGCCG 3600 TCGTCGAACA GCAGCTGCGC GCGCTTGTCG GCGTTGCTGT CGCACAGCTC CGGGAACCAC 3660 TTCTCGGCCA TGCGCGTGAC CTGCTCGTCG ATGTCGCACT GCACGGCTTC CTCCACGCCC 3720 GGGTGCTTGA GCACCTCGCG CAGGGTGCCG CAGTCGCCGC CGCCGATGAT GACCACGTTC 3780 TTCGGCGCGG CGTGGGTGAA CAGCGCCGGG TGCGACATCA TCTCGTGATA GAGGAAGTTG 3840 TCGCGCGTGG TCAGCATGAC CGCGCCGTCG ATCAGCATCA GGTTGCCCCA GTCGGTGGTC 3900 TCGAAGATCT CGATCTTCTG GAACGGCGAC TGCACCTCGT CGAGCTTGC 3949 // ID Contig120 standard; DNA; UNC; 4538 BP. XX DE Contig120.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..4538 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene complement(297..1034) FT /locus_tag="DeVSDRAFT_0073" FT /colour=13 FT CDS complement(297..1034) FT /locus_tag="DeVSDRAFT_0073" FT /product="conserved hypothetical protein" FT /note="SPTR: Q3B485 Hypothetical protein precursor. Pelodictyon luteolum (strain DSM 273) (Chlorobium luteolum (strain DSM 273))." FT /note="KEGG: plt:Plut_0984 hypothetical protein " FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MGVLVIEQWTQFAGLAVRRIDAGDGDGGGRAYAFVNPRPRITAQGAPDAYHPEDTGSGCLRDAGWPGPDWRQRLVADPHQ FT PQRPLRQDAGGYPGYFVSTTALHDARFPRTSAAAYLDAGRVAYLALPQDWLAEDGAGAPGDFVVVHDRGSGRHSFGLIGD FT SGRDRAMGEVSERMASDLSGHRAEARSGRGAPAGPLLCVVFPGSRREPAWPLQTAVIRTRCQQLLRAFGGVAGLAPLAAS FT VAGEE* FT " FT gene complement(1256..1873) FT /locus_tag="DeVSDRAFT_0074" FT /colour=0 FT CDS complement(1256..1873) FT /locus_tag="DeVSDRAFT_0074" FT /product="GCN5-related N-acetyltransferase" FT /note="PFAM: GCN5-related N-acetyltransferase" FT /note="SPTR: Q48KX2 Acetyltransferase, GNAT family. Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6)." FT /note="KEGG: psp:PSPPH_1716 acetyltransferase, GNAT family " FT /note="COGs: COG0456 Acetyltransferases category=R" FT /note="InterPro IPR000182:IPR008125" FT /codon_start=1 FT /transl_table=11 FT /colour=0 FT /translation=" FT MSTSDDDAHAHEDPRAPTVHALREDDIDAAVAFDGSYIAFQRLRLELRDGALHCDLESFDTERIEEPYRKNYGDDADAEG FT LRDYLQRARGNTAPDAAAFVVRVDGRVAGRLMMSRTWNGYAYIDDIAIDRNVRRRGAGSALMRQALAWAREHGYPGIMLE FT TQDTNVVACRMYLRHGFVLGGCDRFHYANEPDLAQETALFWYCRF* FT " FT gene complement(1870..2169) FT /locus_tag="DeVSDRAFT_0075" FT /colour=11 FT CDS complement(1870..2169) FT /locus_tag="DeVSDRAFT_0075" FT /product="GCN5-related N-acetyltransferase" FT /note="PFAM: GCN5-related N-acetyltransferase" FT /note="SPTR: Q0C301 Acetyltransferase, GNAT family. Hyphomonas neptunium (strain ATCC 15444)." FT /note="KEGG: hne:HNE_1174 acetyltransferase, GNAT family " FT /note="COGs: COG0456 Acetyltransferases category=R" FT /note="InterPro IPR000182" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT MLTAPYLPLADLRAEDLELKRIYLLSRFHGGGTGRRLMQHAVAEARSRGAGRLLLGVYAGNERALAFYARCGYVRVGERR FT FQVGANTYEDAILALDLTA* FT " FT gene complement(2163..2417) FT /locus_tag="DeVSDRAFT_0076" FT /colour=13 FT CDS complement(2163..2417) FT /locus_tag="DeVSDRAFT_0076" FT /product="hypothetical protein" FT /note="SPTR: Q82XF4 GCN5-related N-acetyltransferase. Nitrosomonas europaea." FT /note="KEGG: neu:NE0320 GCN5-related N-acetyltransferase " FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation="MTDAAAADLPLIRRAHAGDADALALAGAATFLETFAGILAGADIVAHCRKQHASELYAQSLADPAVALWLREPRPAPRRSGSPC*" FT gene complement(2643..3659) FT /locus_tag="DeVSDRAFT_0077" FT /colour=11 FT CDS complement(2643..3659) FT /locus_tag="DeVSDRAFT_0077" FT /product="Alcohol dehydrogenase, zinc-binding domain protein" FT /note="PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein" FT /note="SPTR: A0U4T1 Alcohol dehydrogenase, zinc-binding. Burkholderia cenocepacia MC0-3." FT /note="KEGG: bur:Bcep18194_B2595 zinc-containing alcohol dehydrogenase superfamily " FT /note="COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases category=R" FT /note="InterPro IPR013149:IPR013154" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT MKAYRIRAGGGIDSLVLSDEARAPIGAGQIRLRVRAVSLNFRDLMIADGRYPAGGERPVIPASDAVAEVIELGPDAGRWA FT LGDRVATSFFPHWHAGAADARNTRDPFGADADGVLAEEIVVSQESVFAVPAHLDDLQAATLTCAGVTAWNALFVEAGLRP FT GQSVLLLGTGGVSIWGLQLAKAAGLRAIVTSSRDDKLERARALGADATINYRTQPEWQDEVLRLTGGAGVDAVLEVGGSG FT TLARSVRAAAMNGTVAIIGGVSGFGGDLDAIALIMGAKRLSGIFVGSRSMGEGLARFVDVNRIVPVVDRSFAFEQAREAY FT RYLESGSHFGKVTIKVAG* FT " FT gene 3795..4538 FT /locus_tag="DeVSDRAFT_0078" FT /colour=6 FT CDS 3795..4538 FT /locus_tag="DeVSDRAFT_0078" FT /product="transcriptional regulator, LysR family" FT /note="PFAM: regulatory protein, LysR; LysR, substrate-binding" FT /note="SPTR: Q1CXG4 Transcriptional regulator, LysR family. Myxococcus xanthus (strain DK 1622)." FT /note="KEGG: mxa:MXAN_6792 transcriptional regulator, LysR family " FT /note="COGs: COG0583 Transcriptional regulator category=K" FT /note="InterPro IPR000847:IPR005119" FT /codon_start=1 FT /transl_table=11 FT /colour=6 FT /translation=" FT MAVNDRLLGIVAFVQSAEAGSFAVAADRLGVTRSAIGKRIARLEQQLGVRLFHRSTRRQSLSEDGQAYYERCVKALAELD FT AAEAALDSGRREPSGRLRISAPVMFGRHCVAPVALELSRRYPKLEIDLSFSDRMVDLVEEGYDLGIRVGRLRDSATLAAR FT LLTQEHLGICAAPAYLAKRGLPREIDDFAGHDAVIYGRHGQTVPWRLRDRAGEVREPQVEARLRFDDLQAIADAAVAGAG FT LAQLPCCC FT " FT misc_feature complement(2292..2357) FT /colour=11 FT /locus_tag="DeVSDRAFT_0076" FT /note="1 probable transmembrane helix predicted by FT TMHMM2.0" SQ Sequence 4538 BP; 644 A; 1604 C; 1647 G; 639 T; 4 other; CTGCGCGAGC ATTGGTATGT GCGCGCGCAN CGGCGCGATC GTTTGGGGAG NCTGGTGCGG 60 CTGGATTTGT CGTTGGTCGA TCAGGCGGGG CCGTCGNCGN CGGAGTAAGG TCCGACCCGG 120 CCGAAGCGCC GCAGCCCGCG AGCTGGCCAC AACGCAGGGC AACGTAAGCG GCGTCGTAGA 180 TGTAGTTTCG CGGTCGCGGC TTGCGCCGCT CCTACAGGGG GCGGTCGATA GCGAATGTAG 240 GAGCGACGCC AGCCGCGCCC CCGATGCCGC ATCGCGTCGC CCCTACAGCC GCCCGCTCAT 300 TCCTCCCCCG CCACCGACGC CGCCAGCGGC GCCAATCCCG CCACCCCGCC GAACGCGCGC 360 AGCAATTGCT GGCAGCGCGT GCGGATCACC GCGGTCTGCA GCGGCCACGC CGGTTCGCGC 420 CGCGAGCCGG GAAACACCAC GCACAGCAAC GGCCCGGCCG GCGCGCCGCG GCCGCTGCGC 480 GCTTCGGCGC GGTGCCCGGA CAGATCGCTG GCCATGCGCT CGGACACCTC GCCCATCGCC 540 CGGTCGCGGC CGCTGTCGCC GATCAGGCCG AAGCTGTGGC GGCCGCTGCC GCGGTCGTGC 600 ACGACCACGA AATCGCCCGG CGCGCCGGCG CCGTCCTCGG CCAGCCAGTC CTGCGGCAAG 660 GCCAGGTACG CCACCCGCCC GGCATCGAGG TAGGCCGCGG CGCTGGTGCG CGGGAAGCGC 720 GCATCGTGCA GCGCGGTGGT GGAGACGAAA TAGCCTGGGT ACCCACCCGC GTCCTGGCGC 780 AAAGGTCGCT GCGGCTGATG CGGATCGGCC ACCAGCCGCT GGCGCCAGTC CGGGCCAGGC 840 CAGCCGGCGT CGCGCAGGCA GCCGCTGCCG GTGTCCTCGG GGTGGTAGGC GTCGGGCGCG 900 CCCTGCGCGG TGATGCGCGG CCGCGGATTG ACGAAGGCGT AGGCGCGGCC GCCACCATCG 960 CCGTCGCCGG CATCGATGCG GCGCACGGCC AGGCCGGCGA ACTGCGTCCA TTGTTCGATC 1020 ACCAGCACGC CCATGACGAT CCATCCCTGC GCGGACGACG CGAGCGCTTC GCGCCTGCCT 1080 CCTGTCGGCA GCGATTGCGC CGGGGCGGAT GTCAATGCGT CGTGATCTTC GCGGCGGAAT 1140 GCACCGGATA TTCATCGCAG TCACGAGGCG CTGCGCAGTT GCTCACGCTG CGAACATAAA 1200 TCCGGCGTCA TCTGGCACTG AAAATCCGTC GATCAAGCGC GGGATACGTC AAAACTCAGA 1260 ACCGGCAGTA CCAGAAAAGT GCCGTTTCCT GCGCCAGATC CGGCTCGTTG GCGTAGTGGA 1320 AACGGTCGCA GCCGCCGAGC ACGAAGCCGT GGCGCAGGTA CATCCGGCAG GCCACGACGT 1380 TGGTGTCCTG GGTTTCCAGC ATGATCCCCG GGTAGCCGTG TTCGCGCGCC CAGGCCAGCG 1440 CCTGCCGCAT CAGCGCCGAG CCGGCGCCGC GGCGGCGCAC GTTGCGGTCG ATGGCGATGT 1500 CGTCGATGTA GGCGTAGCCG TTCCAGGTGC GCGACATCAT CAACCGGCCG GCGACGCGTC 1560 CGTCGACGCG GACCACGAAC GCGGCCGCGT CGGGTGCGGT GTTGCCGCGC GCGCGCTGCA 1620 GATAGTCGCG CAGGCCCTCG GCATCGGCGT CGTCGCCGTA GTTCTTGCGG TACGGCTCTT 1680 CGATACGTTC GGTATCGAAC GATTCGAGAT CGCAGTGCAG CGCGCCGTCG CGCAATTCCA 1740 GGCGCAGGCG CTGGAAGGCG ATGTAGCTGC CGTCGAAGGC CACCGCCGCG TCGATGTCGT 1800 CCTCGCGCAG CGCGTGCACC GTCGGCGCGC GCGGGTCCTC GTGCGCGTGC GCGTCGTCGT 1860 CGCTCGTGCT CATGCCGTCA GGTCCAGAGC CAGGATCGCG TCTTCATAGG TGTTGGCGCC 1920 GACCTGGAAG CGCCGCTCGC CGACGCGCAC ATAACCGCAG CGCGCATAGA ACGCCAGCGC 1980 GCGCTCGTTG CCGGCATACA CGCCGAGCAG CAGGCGGCCG GCGCCGCGCG AGCGGGCTTC 2040 GGCGACCGCG TGCTGCATCA GCCGGCGGCC GGTGCCGCCG CCGTGGAAGC GCGACAGCAG 2100 GTAGATGCGC TTGAGCTCCA GGTCCTCGGC GCGCAGATCG GCCAGCGGCA GGTACGGCGC 2160 GGTCAGCATG GCGAACCCGA CCGGCGCGGC GCCGGCCGCG GTTCCCGCAG CCACAGCGCG 2220 ACCGCGGGGT CGGCCAGGCT CTGCGCGTAC AGCTCCGACG CGTGCTGCTT GCGGCAGTGG 2280 GCGACGATGT CGGCGCCGGC GAGGATGCCG GCGAAGGTTT CCAGGAAGGT CGCCGCGCCG 2340 GCCAGGGCCA GCGCATCGGC GTCGCCGGCG TGGGCGCGGC GGATCAGGGG AAGGTCGGCG 2400 GCAGCGGCAT CGGTCATGGC GGCATCGTGG GGAGCCCGGA GGCGATGCCG TCAAGATCGC 2460 ATGCGCGGGC GGGGTTCGGC ATCGGCGGAT GGTCGCAGTC GTGGCGATGT TGGGTTGCGG 2520 CGTGCAGGGG ATTGCGCCGC GATCTGTCGC GGCGCGGTCG CGGCTTGCGC CGCTCCTACA 2580 GGGAGCCCGT GCGAGAGCGG CGCGAGCTGT TGGCTACGAC GCAACCGCGT CGTGCCGCCG 2640 CCTTACCCCG CAACTTTGAT CGTCACCTTG CCGAAGTGCG AGCCGCTTTC CAGATAGCGG 2700 TAAGCCTCGC GCGCCTGTTC GAACGCGAAG CTGCGGTCCA CCACCGGCAC GATCCGGTTG 2760 ACGTCGACGA AGCGCGCCAG GCCTTCGCCC ATGCTGCGGC TGCCGACGAA AATGCCCGAC 2820 AACCGCTTGG CGCCCATGAT CAGCGCGATC GCGTCGAGGT CGCCGCCGAA ACCGCTGACG 2880 CCGCCGATGA TCGCGACCGT GCCGTTCATC GCCGCGGCGC GCACCGAGCG CGCCAGGGTG 2940 CCGCTGCCGC CGACTTCCAG CACCGCGTCG ACGCCGGCGC CGCCGGTCAG GCGCAGCACT 3000 TCGTCCTGCC ATTCCGGCTG AGTGCGGTAG TTGATGGTCG CATCGGCGCC GAGCGCGCGG 3060 GCGCGTTCGA GCTTGTCGTC GCGGGAGGAA GTGACGATCG CGCGCAGCCC CGCCGCCTTG 3120 GCCAGTTGCA GGCCCCAGAT CGATACGCCG CCGGTGCCCA GCAGCAGCAC GCTCTGGCCC 3180 GGGCGCAGGC CGGCTTCGAC GAACAGCGCG TTCCAGGCGG TGACGCCGGC GCAGGTCAGG 3240 GTCGCGGCCT GGAGGTCGTC CAGGTGTGCG GGCACGGCGA ACACCGACTC TTGCGACACC 3300 ACGATCTCTT CGGCCAGCAC GCCGTCGGCG TCGGCGCCGA ACGGGTCGCG GGTGTTGCGC 3360 GCGTCGGCCG CGCCGGCGTG CCAGTGCGGG AAGAAGCTGG TGGCGACGCG GTCGCCGAGC 3420 GCCCAGCGGC CGGCGTCGGG GCCGAGTTCG ATCACTTCGG CGACCGCGTC GGAGGCGGGA 3480 ATCACCGGGC GCTCGCCGCC GGCCGGATAG CGGCCGTCGG CGATCATCAG GTCGCGGAAG 3540 TTCAGCGACA CGGCGCGCAC GCGCAGGCGG ATCTGGCCGG CGCCGATCGG CGCGCGGGCT 3600 TCGTCGGACA AAACGAGCGA GTCGATGCCG CCGCCGGCGC GGATGCGGTA AGCCTTCATG 3660 GGGAACACTC CTGGAACGCT GGGGGATGGA GGCCGCGGCA CCGCCGCGGC GAAGTGGCGC 3720 TACGATATCG TCGCCCCGCG CGCTTTGGTG GCTAGCTTTG CGCCACTCTG CGTCGCCCAT 3780 CAGGAACCAA TCGCATGGCC GTCAACGACC GTCTGCTCGG CATCGTCGCC TTCGTCCAAT 3840 CGGCCGAGGC CGGCAGTTTC GCGGTCGCCG CCGACCGCCT CGGGGTGACC CGCTCGGCCA 3900 TCGGCAAGCG CATCGCCCGG CTCGAACAAC AGCTCGGCGT GCGCCTGTTC CACCGCAGCA 3960 CCCGCCGCCA GAGCCTGAGC GAGGACGGCC AAGCCTATTA CGAGCGCTGC GTCAAAGCCC 4020 TGGCCGAACT CGACGCCGCC GAGGCCGCGC TCGACAGCGG CCGGCGCGAA CCCAGCGGGC 4080 GGCTGCGGAT CAGCGCGCCG GTGATGTTCG GCCGCCATTG CGTGGCGCCG GTGGCGCTGG 4140 AGCTGTCGCG GCGCTACCCG AAGCTGGAGA TCGATCTGTC GTTCAGCGAC CGCATGGTCG 4200 ACCTGGTCGA GGAAGGCTAC GACCTGGGCA TCCGCGTCGG CCGCCTGCGC GACAGCGCCA 4260 CCCTCGCCGC GCGCCTGCTG ACCCAGGAAC ACCTGGGCAT CTGCGCCGCG CCGGCGTACC 4320 TGGCCAAGCG CGGGCTGCCG CGCGAGATCG ACGACTTCGC CGGCCACGAC GCGGTGATCT 4380 ACGGCCGCCA CGGCCAGACC GTGCCCTGGC GCCTGCGCGA CCGCGCGGGC GAAGTGCGCG 4440 AGCCGCAGGT CGAGGCGCGC CTGCGCTTCG ACGACCTGCA GGCCATCGCC GACGCTGCTG 4500 TCGCGGGCGC CGGCCTGGCG CAACTGCCGT GCTGCTGC 4538 // ID Contig1211 standard; DNA; UNC; 5194 BP. XX DE Contig1211.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..5194 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene 17..2059 FT /locus_tag="DeVSDRAFT_0086" FT /colour=9 FT CDS 17..2059 FT /locus_tag="DeVSDRAFT_0086" FT /product="ABC-2 type transporter" FT /note="PFAM: ABC transporter related; ABC-2 type transporter" FT /note="SPTR: Q3BMX9 ABC transporter permease. Xanthomonas campestris pv. vesicatoria (strain 85-10)." FT /note="KEGG: xcv:XCV4153 ABC transporter permease " FT /note="COGs: COG1131 ABC-type multidrug transport system ATPase component category=V" FT /note="InterPro IPR000412:IPR003439:IPR013525:IPR013526" FT /codon_start=1 FT /transl_table=11 FT /colour=9 FT /translation=" FT MGVRPRPGAKGGGDAAPRGGRSDRRRKLRPVRAARGRRNGAVRNSLWPGWRHGAAYTKPFAARPAASDRDPPAMTQPTAL FT ATGPRQVSAAAVAAGAAVPALRVRDLRKTYDNKVQALKGVSLDVAEGDFFALLGPNGAGKSTLIGIVSSLVNLSDGAVEI FT FGTDLQRRRDEAMRLIGLVPQEINFNMFEKPLDILVNYAGFYGVPREQALVRAEEELKRAQLWDKADKMSRTLSGGMKRR FT LMIARAMMTRPAFADPRRA-RRRRNRNPPRHVEDPARDQRRRHHHHPHHPLPGRSREPVPQPGDHRPGPHRPAGPDEGAA FT GDARRGRFPARYRRRAAGRAAADRRRDPGRRRRPHPGPGNAARDGPQPRVRRARRSRHPGALDADQVQSPGGAVRAHDRA FT ALRRRHRERRMSSEIQTADSAAISPARRNLTALGTIVRREVTRILRIWGQTLVPPAITMTLYFLIFGGLIGSRIGDMGGY FT SYMEFIVPGLVMMSVIQNSYGNISSSFFGAKFGRHVEELLVSPMPNWVILWGYVAGAVLRGLMVGAIVLLIAMCFTKVRI FT PHPLVTFTTVLLGATIFSLAGFINAVYAKKFDDVAIVPTFILTPLTYLGGVFYSVKLLPAWAEAATHANPIFYMVNAFRY FT GLLGSSDVPLWVAYALMLAFVVALSSLGLWLLKRGVGLRS* FT " FT gene 2946..3479 FT /locus_tag="DeVSDRAFT_0087" FT /colour=13 FT CDS 2946..3479 FT /locus_tag="DeVSDRAFT_0087" FT /product="hypothetical protein" FT /note="SPTR: A1FV43 Hypothetical protein precursor. Stenotrophomonas maltophilia R551-3." FT /note="InterPro IPR000437" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MRLTPLAAIASLALLAACTAPDKPKDATATPAADSAAGTAPQPAVAADGPGPASAKIGADQVGKVSPVPAFKGFGEHWSI FT DIQATGEMNHKVDLTWGSGSEKASGSARYNGQPADAPNTLIVLSGELQTQAGAKPMTIEISKKECIDDGDNKHMHSVDVS FT VEGMDKLTGGCGDLAVY* FT " FT gene complement(3558..4625) FT /locus_tag="DeVSDRAFT_0088" FT /colour=13 FT CDS complement(3558..4625) FT /locus_tag="DeVSDRAFT_0088" FT /product="hypothetical protein" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT LSFRTTVQSGLIEICARLGKDWARSTVESEGPGQGPGRCRPRRGCGRTHGRAETQPADEPATLSRPLLAPAPMPTALAEN FT RSPAFVPLALSTLVFVLSGAFVLVAALSSPAAQGTGLNVAQWLCSIGSLIGFVAALACVLTDRRGVPVRPWACILAALVL FT IFGLGVAWSLLQTPLMQSLAQRSGAQTLGAWAAGLGALKVVAVNLVALPLAWWLGGRGALPVVWTSRQRRAIGALVALSL FT GAGVALLVQTAAAAFTALGEGEQRAGMSVVGLAVGAVHGLTALIAPVRRGSGALPALWSSLLTPALIVLASLPAMLGGEH FT WELAARVIAVALALLLAPVASWLLVRWLHGRSTRA* FT " FT misc_feature order(1355..1423,1466..1534,1595..1663,1706..1774, FT 1793..1852,1961..2029) FT /colour=11 FT /locus_tag="DeVSDRAFT_0086" FT /note="6 probable transmembrane helices predicted by FT TMHMM2.0" FT misc_feature complement(order(3582..3647,3678..3743,3765..3830, FT 3861..3926,3990..4055,4116..4181,4203..4268,4314..4379)) FT /colour=11 FT /locus_tag="DeVSDRAFT_0088" FT /note="8 probable transmembrane helices predicted by FT TMHMM2.0" FT sig_peptide 2946..3086 FT /colour=11 FT /locus_tag="DeVSDRAFT_0087" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 1.000) with cleavage site probability 0.489 at FT residue 47" SQ Sequence 5194 BP; 889 A; 1845 C; 1719 G; 740 T; 1 other; TGCGACGGAG TTCTCGATGG GCGTCCGGCC GCGGCCGGGT GCGAAAGGGG GCGGGGACGC 60 CGCGCCGCGA GGCGGGCGAA GCGACCGGCG GCGCAAACTC CGGCCGGTCC GGGCTGCGCG 120 CGGCCGTCGA AATGGCGCGG TCCGCAACAG TCTGTGGCCG GGGTGGCGCC ACGGGGCGGC 180 CTATACTAAG CCATTCGCCG CGAGGCCCGC GGCCAGCGAC CGAGACCCTC CCGCAATGAC 240 CCAGCCAACG GCCCTCGCCA CGGGCCCCCG TCAGGTTTCC GCCGCCGCCG TCGCGGCCGG 300 CGCCGCCGTT CCCGCCCTGC GCGTGCGCGA CCTGCGCAAG ACGTACGACA ACAAGGTCCA 360 GGCGCTCAAG GGCGTGTCCC TGGACGTCGC CGAAGGCGAC TTCTTCGCCC TGCTTGGCCC 420 CAACGGCGCC GGCAAGTCGA CCCTGATCGG CATCGTCAGC TCGCTGGTCA ATCTCAGCGA 480 CGGCGCGGTG GAGATCTTCG GCACCGACCT GCAGCGCCGC CGCGACGAAG CGATGCGCCT 540 GATCGGCCTG GTGCCGCAGG AAATCAACTT CAACATGTTC GAAAAGCCGC TCGACATCCT 600 GGTCAACTAC GCCGGCTTCT ACGGCGTGCC GCGCGAACAG GCGCTGGTGC GCGCCGAAGA 660 GGAACTCAAG CGCGCGCAGC TGTGGGACAA GGCTGACAAG ATGAGCCGCA CGCTGTCCGG 720 CGGCATGAAA CGCCGGCTGA TGATCGCCCG CGCGATGATG ACCCGGCCCG CGTTTGCTGA 780 TCCTCGACGA GCCCANCGCC GGCGTCGAAA TCGAAATCCG CCGCGGCATG TGGAAGACCC 840 TGCGCGAGAT CAACGCCGCC GGCACCACCA TCATCCTCAC CACCCACTAC CTGGAAGAAG 900 CCGAGAGCCT GTGCCGCAAC CTGGCGATCA TCGACCAGGG CCGCATCGTC CAGCAGGGCC 960 CGATGAAGGC GCTGCTGGCG ATGCTCGACG TGGAAGGTTT CCTGCTCGAT ATCGACGGCG 1020 TGCTGCCGGC CGCGCTGCCG CAGATCGAAG GCGCGACCCT GGCCGCCGCC GACGACCACA 1080 CCCTGGACCT GGAAATGCCG CGCGCGATGG ACCTCAACCG CGTGTTCGCC GCGCTCGGCG 1140 AAGCCGGCAT CCGGGTGCGC TCGATGCGGA CCAAGTCCAA TCGCCTGGAG GAGCTGTTCG 1200 TGCGCATGAT CGCGCCGCCC TCCGCCGCCG CCACCGGGAG CGCCGCATGA GCAGCGAGAT 1260 CCAAACGGCC GACAGCGCCG CGATTTCGCC CGCGCGCCGC AACCTGACCG CGCTGGGCAC 1320 CATCGTGCGC CGCGAAGTGA CGCGAATCCT GCGCATCTGG GGCCAGACCC TGGTGCCGCC 1380 GGCGATCACC ATGACCTTGT ACTTCCTGAT CTTCGGCGGC CTGATCGGCT CGCGCATCGG 1440 CGACATGGGC GGCTACAGCT ACATGGAGTT CATCGTCCCG GGCCTGGTGA TGATGAGCGT 1500 GATCCAGAAC AGCTACGGCA ACATCTCCTC GAGCTTCTTC GGCGCCAAGT TCGGCCGCCA 1560 CGTCGAGGAA CTGCTGGTCA GCCCGATGCC GAACTGGGTG ATCCTGTGGG GCTACGTCGC 1620 CGGGGCGGTG CTGCGCGGGC TGATGGTCGG CGCGATCGTG CTGCTGATCG CGATGTGCTT 1680 CACCAAGGTG CGCATCCCGC ACCCGCTGGT GACCTTCACC ACCGTGCTGC TGGGCGCGAC 1740 GATCTTCTCG CTGGCCGGCT TCATCAACGC GGTGTACGCG AAGAAGTTCG ACGACGTGGC 1800 GATCGTGCCG ACCTTCATCC TGACCCCGCT GACGTACCTG GGCGGCGTGT TCTATTCGGT 1860 CAAGCTGCTG CCGGCGTGGG CGGAAGCGGC GACCCACGCC AATCCGATCT TCTACATGGT 1920 CAACGCGTTC CGCTACGGCC TGCTCGGCAG CAGCGACGTG CCGTTGTGGG TGGCGTATGC 1980 GCTGATGCTG GCGTTTGTGG TGGCGCTGTC GTCGCTGGGC TTGTGGTTGC TCAAGCGCGG 2040 TGTGGGGTTG CGTAGCTGAG GCGGGCGCCG TTCGGCGAAA TCTACGGCAG GTTTGATGTC 2100 TTGCTGCAGG AGTGGTGCGA GTCGCGGCTG CGAGTGCGCA GCTACGTCAT GGCTGGGTTG 2160 TCGTGGTCGC GGCTCGCGCC GCTCCTACAG TCGGATACGT AGCCGGCCGG AGCCCCTGTA 2220 GGAGCGACGC GAGTCGCGAC CAACCGCAGC GACGTAGCCC CGCCGAACTC GCCCGAAGAC 2280 CCGAAGCTCC CAACCCCGTC ATTCCGGCAA AAGCCGGAAT CCAACCGCAG CGACGCGGCT 2340 CCGCTGTGAT CTCCCGAAGC CCGCAACCCC ACGCCGTCAT TCCGGCGAAA GCCGGAACCC 2400 ATTTTGATCT GGCTTCTGCT TCTCTCGTAG CAACGAGTGA CGACAAGCGA AGATCAACAG 2460 CTTCCGTCCG CAAGCGGCCG GGTCACTTTC TTTGTCTTGC CAAAGAAAGT AACCAAAGAA 2520 AGGCGCTTTC CTTGTTTTCG AATCAAGAGC CACTATGGTT CGGTGCTTGC GCGGGGATGC 2580 GCCACACAGG CCATCCATGG CCTGGGTGGC GCACGGCGCG CATCCTGCGC GCCGCCCTTC 2640 GGGTCTCTCA TTGCCTGTGG CGAGTTCGGG GCGGCGGGGG GAGCGGGGAG CAAGGGCAAC 2700 AGCGAGATCA ACATGGATTC CGGCTTTCGC CGGAATGACG AGCTGGGGCG GCGGGGGTCG 2760 GGAGTTACGA CGTGCCGAGT CGCTGCGGTC GATAACGGCC ATCGCCGTTG CGGTCCACAG 2820 CCCCGCATAT CTCGGCCGCG TATGAGCGGA GCGGAAATTC CCTCCATTGA CCCTTCCTGC 2880 AGCCGCCCCG CGTTACAACC ATGCCGCCCG CCCCCGGGCG TAACCGCCAC ACCCAAGGAG 2940 TTCCCATGCG CCTGACGCCT CTTGCCGCGA TCGCTTCGCT GGCCCTGCTC GCCGCCTGCA 3000 CGGCGCCCGA CAAGCCCAAA GACGCCACGG CGACGCCGGC GGCCGACAGC GCGGCAGGGA 3060 CCGCGCCGCA GCCCGCGGTC GCTGCCGACG GTCCGGGCCC GGCCTCGGCC AAGATCGGCG 3120 CCGACCAGGT CGGCAAGGTC AGCCCGGTGC CCGCGTTCAA GGGCTTCGGC GAACACTGGA 3180 GCATCGACAT CCAGGCCACC GGTGAGATGA ATCACAAGGT CGATCTGACC TGGGGCAGCG 3240 GCAGCGAGAA GGCCAGCGGC AGCGCGCGCT ACAACGGCCA GCCGGCCGAC GCGCCGAACA 3300 CGCTGATCGT GCTCAGCGGC GAACTGCAGA CCCAGGCCGG CGCCAAGCCG ATGACGATCG 3360 AGATCAGCAA GAAGGAATGC ATCGACGACG GCGACAACAA GCACATGCAC TCGGTCGATG 3420 TGAGCGTCGA GGGCATGGAC AAGCTCACCG GCGGTTGCGG CGACCTGGCC GTGTACTGAT 3480 CGCGCCGCGC CACCGGACAA AACAAACGGC CCGCATTGCG GGCCGTTTGC GTAGGTGCCG 3540 CCGGGCGCGT CGCGTCGTCA GGCGCGGGTC GAGCGCCCGT GCAGCCAGCG CACCAGCAGC 3600 CACGAGGCGA CCGGCGCCAG CAGCAGCGCC AGCGCCACCG CGATCACCCG CGCCGCCAGC 3660 TCCCAATGTT CGCCGCCGAG CATCGCCGGC AGCGAAGCGA GCACGATCAG CGCCGGCGTC 3720 AGCAGCGACG ACCACAGCGC CGGCAGCGCG CCCGAGCCGC GCCGCACCGG CGCGATCAAC 3780 GCCGTCAGCC CGTGCACCGC GCCGACCGCG AGGCCGACCA CGCTCATGCC GGCGCGCTGT 3840 TCGCCCTCGC CGAGCGCGGT GAACGCGGCG GCCGCGGTCT GCACCAGCAA GGCCACGCCC 3900 GCGCCCAGGC TCAGCGCCAC CAGCGCGCCG ATCGCGCGGC GTTGCCGCGA GGTCCACACC 3960 ACCGGCAGCG CGCCGCGTCC GCCCAGCCAC CAGGCCAGCG GCAGCGCGAC CAGATTCACC 4020 GCCACCACCT TGAGCGCGCC GAGCCCGGCC GCCCAGGCGC CCAGGGTCTG CGCGCCGGAG 4080 CGCTGCGCCA GCGACTGCAT CAGCGGCGTC TGCAGCAGCG ACCAGGCCAC GCCAAGGCCG 4140 AAGATCAGCA CCAGCGCGGC GAGGATGCAG GCCCACGGCC GCACGGGCAC GCCGCGGCGA 4200 TCGGTCAGCA CGCAGGCCAG CGCGGCGACG AAGCCGATCA GCGAGCCGAT CGAACACAGC 4260 CACTGCGCCA CGTTCAAGCC CGTGCCCTGC GCCGCCGGCG AGGACAGCGC CGCGACCAGC 4320 ACGAACGCGC CGGACAGCAC GAACACCAGC GTCGACAAAG CCAGTGGGAC GAACGCGGGC 4380 GAGCGGTTTT CGGCGAGGGC GGTCGGCATG GGCGCGGGCG CGAGGAGGGG GCGCGACAGG 4440 GTAGCCGGTT CGTCCGCCGG CTGGGTCTCG GCGCGCCCGT GCGTACGGCC GCAGCCGCGG 4500 CGCGGACGGC AGCGTCCAGG GCCCTGGCCG GGGCCCTCGG ATTCGACCGT GGAGCGCGCC 4560 CAATCTTTGC CGAGTCTGGC GCAAATCTCG ATCAAACCTG ATTGAACAGT CGTTCGAAAC 4620 GACAAAGATG AATTTTTATA ATCAATAGCT TAGGCACAAG AAACATTTTG TTACGTTTTT 4680 TTCTTGCCAG CGCGAACCCG CCCGACTTAG GTATGGAGGC CCAGGCGCAA GGCCTTGGGT 4740 GACTTTTCGG GGGAAAAATC ATGCAAACGA CTCACCGTCG CGGCACTGCG CCGCGCCGTT 4800 CGCCGCTCAT GCTCGGAATT TGCCTGGCGC TGGCCGTTCC GGCCGCCCTG GCCCAGCAGG 4860 CCGCACCCGC CGCCAAGCCG GCCGCCGCGG AATCCAAACC CGCCAGCGCG CCGACCGATC 4920 TGGACCGCCT GGTCGTCACC GGTTCGCGCA TTCGCCGCGC CGGCTTCGAC ACGCTCGAAC 4980 CGGCGACGGT GGTGAGCAAG GACTACATCG CCTCGCGCGG CATCACCAAC GTCGCCGACG 5040 CGCTCAACGA AATTCCCGGC TTCGGCGTCG GCATCACGCC CGAAGGCGGG CAGGCGACCT 5100 TCGGCACCGG CGTCAACTTC GTCAACCGCT TCGGCATCGG CAGCGCGCGC ACCCTGACCC 5160 TGGTCAACGG CCGCCGCTTC GTCACCAGCG CGCC 5194 // ID Contig1215 standard; DNA; UNC; 2845 BP. XX DE Contig1215.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..2845 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene complement(90..1181) FT /locus_tag="DeVSDRAFT_0089" FT /colour=15 FT CDS complement(90..1181) FT /locus_tag="DeVSDRAFT_0089" FT /product="response regulator receiver sensor signal transduction histidine kinase" FT /note="PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein" FT /note="SPTR: Q4AG88 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal. Chlorobium phaeobacteroides BS1." FT /note="KEGG: syn:slr2099 two-component hybrid histidine kinase " FT /note="COGs: COG0642 Signal transduction histidine kinase category=T" FT /note="InterPro IPR001789:IPR003594:IPR003661:IPR004358:IPR005467" FT /codon_start=1 FT /transl_table=11 FT /colour=15 FT /translation=" FT VSTPATSTGRILVVDDQAANLRVVTALLSRQGYEVVAASTGDEALQLYAQSPPDLILLDVMMPGMDGFEVMDALRADSPL FT RVPVVFVTAAHDRDLLLRAFDAGVVDYVTKPFLPEELLARVNAHVGLKLTRDRLERVAREREELVNLVAHDLKNPLTSVL FT FASDLLINNGCKPERVPRYLQMIHESADDALGYIRHYLESQAGHRERAEHGARADLAETLDWLVRRYEMQLDARGIRVQV FT QPPANGSAQVAMDSRVLRQVSENLVTNAMKYAPGGDLTLAARNSAPGFWQLIVADRGPGIPVARQRELFKPFVRLHDNDI FT DDGLSSGLGLSLAKQIVVNAGGQLWYEERKHGGSRFIIELPEA* FT " FT gene 1434..2387 FT /locus_tag="DeVSDRAFT_0090" FT /colour=3 FT CDS 1434..2387 FT /locus_tag="DeVSDRAFT_0090" FT /product="aldo/keto reductase" FT /note="PFAM: aldo/keto reductase" FT /note="SPTR: Q3BYY6 Putative oxidoreductase. Xanthomonas campestris pv. vesicatoria (strain 85-10)." FT /note="KEGG: xcv:XCV0296 putative oxidoreductase " FT /note="COGs: COG0667 oxidoreductases (related to aryl-alcohol dehydrogenases) category=C" FT /note="InterPro IPR001395" FT /codon_start=1 FT /transl_table=11 FT /colour=3 FT /translation=" FT MNLRPLGRSSLSVAPLAFGGNVFGWSADEATSFALLDAFTEAGFALVDTADVYSAWVPGNQGGESERIIGRWLAQGGGRR FT ERVVVATKVAKWAPRRGLAPATIQAAVDDSLRRLGTEVIDLYQAHEDDPTVPLEDTLGAFARLIEAGKVRAIGASNYSAA FT RLAQALDVSERHGLPRYETLQPEYNLCDRAGFEAELEPLVRERGVGVIGYYSLASGFLTGKYRSRADLGKSRARGGAVEK FT YLDARGLRILAALDEVAAGHGATPAQVALAWLIARPSVTAPIASATSVAQLHELLAATRLNLRVDEIAALDAASAGG* FT " FT sig_peptide 1434..1508 FT /colour=11 FT /locus_tag="DeVSDRAFT_0090" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 0.888) with cleavage site probability 0.747 at FT residue 25" SQ Sequence 2845 BP; 433 A; 981 C; 980 G; 451 T; 0 other; CGGCGAGTTC GTATCCGACT GTAGGAGCTG CGCAAGCTGC GACCGCGAAA ACAAAGCTAC 60 GGCGAACCCA TCGCGCCGCG CCGCGTCTTT CAGGCCTCCG GCAACTCGAT GATGAAACGC 120 GAGCCGCCGT GCTTGCGTTC CTCATACCAA AGCTGCCCGC CGGCATTGAC CACGATCTGC 180 TTGGCCAGCG ACAAACCCAG CCCGCTCGAC AAACCATCGT CGATGTCGTT GTCGTGCAGG 240 CGCACGAACG GTTTGAACAA CTCGCGCTGG CGCGCCACCG GAATCCCCGG TCCGCGGTCG 300 GCGACGATCA GCTGCCAGAA GCCGGGCGCG CTGTTGCGCG CGGCCAGGGT CAGGTCGCCG 360 CCGGGCGCGT ATTTCATCGC GTTGGTCACC AGGTTTTCGC TGACCTGGCG CAGCACGCGC 420 GAGTCCATCG CCACTTGCGC CGAACCATTC GCCGGCGGTT GCACCTGCAC GCGGATGCCG 480 CGCGCGTCGA GCTGCATTTC GTAGCGGCGC ACCAGCCAGT CCAGGGTTTC GGCCAGGTCC 540 GCGCGGGCGC CGTGTTCGGC GCGTTCGCGG TGGCCGGCCT GGCTTTCCAG GTAATGGCGG 600 ATGTAGCCCA GCGCGTCGTC GGCGCTTTCG TGGATCATCT GCAGATAGCG CGGCACGCGC 660 TCGGGCTTGC AGCCGTTGTT GATCAGCAGG TCGCTGGCGA ACAGCACGCT GGTCAGCGGA 720 TTCTTGAGAT CGTGCGCGAC CAGGTTGACC AGTTCCTCGC GCTCGCGCGC GACCCGTTCC 780 AGGCGGTCGC GGGTGAGCTT GAGGCCGACG TGGGCGTTGA CCCGCGCCAG CAATTCTTCG 840 GGCAGGAACG GCTTGGTGAC GTAATCGACC ACGCCGGCGT CGAACGCGCG CAGCAGCAGG 900 TCGCGGTCGT GGGCGGCGGT GACGAACACC ACCGGCACGC GCAGCGGCGA GTCGGCGCGC 960 AGCGCGTCCA TGACTTCGAA ACCGTCCATG CCCGGCATCA TCACGTCGAG CAGGATCAGG 1020 TCGGGCGGGG ACTGCGCATA CAGCTGCAAA GCCTCGTCGC CGGTCGAGGC GGCCACCACC 1080 TCGTAACCCT GGCGGGACAA CAGGGCGGTC ACCACGCGCA GATTCGCGGC CTGGTCGTCG 1140 ACGACCAGGA TGCGACCGGT GGATGTCGCG GGAGTGCTCA CGTCCTGTAA ATCTCCTGGA 1200 GGCGCTGGAT TGCCACGGAA TTCACATGAA ATTCGCATAT GTGAATCGAG TGGAAATCGT 1260 GTGGCAAGTT AACAGAAACC TTCACATAAA GGCGGAACAG CCGCCGGGAA TGATGAATCG 1320 TTCACGGCCC TGCGACGACC CGCCGCAGCC GCCAATCCAG GCACACGAAA TCCGCGATGA 1380 CGGCCGCATT TGTGGCGGCG CATCATGAAC ATTCCCGCAT TAAGGAAACT GCAATGAACC 1440 TGCGTCCGCT CGGCCGTTCT TCCCTGTCCG TGGCGCCGTT GGCGTTCGGC GGCAATGTAT 1500 TCGGCTGGAG TGCCGACGAG GCGACGAGTT TCGCCCTGCT GGATGCATTC ACCGAGGCCG 1560 GTTTCGCCCT GGTCGACACC GCCGATGTGT ATTCGGCGTG GGTGCCGGGT AATCAGGGCG 1620 GCGAGTCCGA ACGCATTATC GGCCGCTGGC TGGCTCAGGG CGGCGGGCGC CGCGAGCGGG 1680 TCGTCGTCGC CACCAAGGTC GCCAAGTGGG CGCCGCGGCG CGGGCTGGCG CCGGCCACTA 1740 TCCAGGCGGC GGTGGACGAT TCGCTGCGGC GGCTCGGCAC CGAGGTCATC GATCTTTACC 1800 AGGCCCACGA GGACGACCCG ACGGTGCCGC TGGAAGACAC CCTGGGCGCA TTCGCCCGCC 1860 TGATCGAGGC CGGGAAAGTG CGCGCGATCG GCGCGTCCAA TTACTCGGCC GCGCGCCTGG 1920 CCCAGGCCCT GGACGTGTCG GAACGGCACG GGCTGCCGCG TTACGAAACT CTGCAACCGG 1980 AATACAACCT CTGCGATCGC GCCGGCTTCG AAGCCGAACT GGAGCCGTTG GTGCGCGAAC 2040 GCGGCGTCGG CGTGATCGGT TACTACTCGC TGGCCAGCGG TTTCCTGACC GGCAAGTACC 2100 GCAGCCGCGC CGACCTGGGC AAGAGCCGGG CGCGCGGCGG CGCGGTGGAA AAGTATCTGG 2160 ACGCGCGCGG GCTGCGCATC CTGGCCGCGC TCGACGAGGT CGCCGCCGGC CACGGCGCGA 2220 CCCCGGCGCA GGTGGCGCTG GCCTGGCTGA TCGCGCGGCC GTCGGTGACC GCGCCGATCG 2280 CCAGCGCGAC CAGCGTGGCG CAGTTGCACG AGTTGCTTGC GGCGACGCGG TTGAACCTGC 2340 GCGTCGACGA GATCGCGGCG CTGGATGCGG CCAGCGCCGG CGGCTGATCG CGGCCGCGCC 2400 GGCGGCCGGG CCGACGCTGG CCGGTTCGAC GCCGCTCGCA GCGACGCCGT CCGGCCGACG 2460 GCCCGCCGCA GCAAAGCGCG GCGGTCGCAT CGCCGCGTCG CCGACCCGGC GCTGGCCTTA 2520 CCCTGTGCCG CGGACGCCCC GACGTTCGCC ATCGCCTTCC TTCCTGTTCC GCCGCCGCTC 2580 GCGAACGCCG CGGCGGCGCC CGCGCCCAGC CGAGACGAAC CGCCCGTGTC CCCCGCTTCG 2640 AGTTCCACTG CCCGCCGCAC CGGCGTCGCC CTCGCCGCCA GCGGCGCGAT CCTGTTCTCG 2700 GCCAAGGCGA TCCTGGCCAA GCTGCAATAC CGCTACGGCG TGGATTCGCT GCAGGTGCTG 2760 GCGCTGCGCA TGGCGTTCTC GCTGCCGCTG TTCGCCGCGC TGGGCGTGCG CGAGCACGCC 2820 CGCGCGCGCG CCCGCGGCGC GCTGC 2845 // ID Contig1221 standard; DNA; UNC; 3505 BP. XX DE Contig1221.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..3505 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene 3..893 FT /locus_tag="DeVSDRAFT_0095" FT /colour=13 FT CDS 3..893 FT /locus_tag="DeVSDRAFT_0095" FT /product="hypothetical protein" FT /note="SPTR: Q829V8 Putative antibiotic transport protein. Streptomyces avermitilis." FT /note="KEGG: sma:SAV6301 antibiotic transport protein " FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT RRGLLAPANAVFALASSVATMAMPMLAGGLILSSSGPHALAAAFAVDALCVAASLPLIAALRRRGPARGREAVDAEAGAA FT TANAATIAAPAIARSYYLYLLASSLLAFGPVQILLPVLLVQRHDPRYLAIYAAQFLGVSLAAALAARRPPERMERILYGV FT AGCWLAAALAYALLGWGAAAWPLGATVLAFGLLAAASNHYGIRSLSWLQRSADPRRMGREMTWFSAATMGAMPLAALATG FT WLIETRGLAGASLTLAAALAACALAGTMHLHLRATVARAASPRDGAASPAAFAADD* FT " FT gene complement(900..3221) FT /locus_tag="DeVSDRAFT_0096" FT /colour=13 FT CDS complement(900..3221) FT /locus_tag="DeVSDRAFT_0096" FT /product="hypothetical protein" FT /note="SPTR: Q1D6T1 Hypothetical protein. Myxococcus xanthus (strain DK 1622)." FT /note="KEGG: mxa:MXAN_3445 hypothetical protein " FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MDTKGLTRPGLRRCAATLAAGLLLAAPLAQAQNFETYYGQPEWRDAAEDVKSVAQCPGGGSVTVATRRNGSSDQVLITRM FT DDNGVSDGAAPGTWQRAYPIAGAKFSSGLGIVELGERRGFAVTGTVRAGDSSRIYVMNVDCAGNMVWTTLLENADGNAIA FT TGYDLIQSGALTSSANGDIVVVGDEIVPSQGRTFGRIVRLGLGGNVIWDQRYDGREWPSLQFRAVTENLAATGAFTDLVV FT AGGASGGDLRKALMFRTDANGAPVCATTLGDEREHRDFYGLTALLSRGYSGDTVMVGEARGPAEGALPRPYLARFGRASC FT DPKAQADWYAPDKQGFTAFDVVEARNIDGNDGALAVAGTIYGTQGFSFAANPADLRQYAAGPLARLYGNEKREAIYAIDR FT KGDRFVLAGYTGADRDGSGDPQDVYFVQSDPVLKTRCAQDWTPEGMGVDLPYKDTRPEPKRIDKWSAAGTEPIVASDWKY FT ACERDPPNGCPGVIDNGTVMLGVHDAGYLNIECPAIKPSMGLYGTSLVGLRLMSTNGEASAPGAPCEGWGVANADPALPI FT TAHASRCGTTANVVAAPLTVQPTAPFDRATSTVTVGSTFRIVHRYIPTAVTPFLYRVEVSIQNIGRSTVKDLRYTRGIDY FT DVPPNTFSEYITLAGSSPLLVGWNNNGFTSLDPLAAHPTTGAMTDNGPGDLGSHMDFRLGSLAPGATRSFVTYYGAAPTE FT KQALNALSSVGAGLYSLGQPNYLNGSPWNAPIPGPDGPLLGVPNTFMYGLQTK* FT " FT misc_feature order(36..104,117..185,285..353,381..434,468..527,537..605, FT 663..731,744..812) FT /colour=11 FT /locus_tag="DeVSDRAFT_0095" FT /note="8 probable transmembrane helices predicted by FT TMHMM2.0" FT sig_peptide 3..128 FT /colour=11 FT /locus_tag="DeVSDRAFT_0095" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 0.999) with cleavage site probability 0.271 at FT residue 42" FT sig_peptide complement(3126..3221) FT /colour=11 FT /locus_tag="DeVSDRAFT_0096" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 0.994) with cleavage site probability 0.964 at FT residue 32" SQ Sequence 3505 BP; 456 A; 1204 C; 1296 G; 549 T; 0 other; TGCGCCGCGG CCTGTTGGCA CCGGCCAATG CGGTGTTCGC GCTCGCCTCC AGCGTGGCGA 60 CGATGGCGAT GCCGATGCTG GCCGGCGGCC TGATCCTATC CTCGTCCGGC CCGCACGCGC 120 TGGCCGCAGC GTTCGCGGTC GATGCGCTGT GCGTGGCGGC CTCGCTGCCG CTGATCGCGG 180 CGCTGCGCCG GCGCGGGCCG GCGCGCGGGC GCGAGGCCGT CGATGCGGAA GCCGGCGCCG 240 CAACGGCGAA CGCCGCAACC ATCGCCGCGC CCGCCATCGC GCGCAGCTAT TACCTCTACC 300 TGCTCGCCAG CAGCCTGCTC GCGTTCGGCC CGGTGCAGAT CCTGCTGCCG GTGCTGCTGG 360 TACAGCGCCA CGATCCGCGC TATCTGGCGA TCTACGCCGC GCAGTTCCTC GGCGTGTCGC 420 TGGCCGCGGC GCTGGCGGCG CGGCGCCCGC CCGAACGCAT GGAACGGATC TTGTACGGGG 480 TGGCCGGGTG CTGGCTCGCG GCCGCCCTCG CCTACGCCTT GCTCGGCTGG GGCGCGGCGG 540 CGTGGCCGTT GGGCGCGACG GTGCTGGCGT TCGGCTTGCT CGCCGCAGCA AGCAACCACT 600 ACGGCATCCG CTCGCTGTCG TGGTTGCAGC GCAGCGCCGA TCCGCGCCGG ATGGGCCGGG 660 AGATGACCTG GTTCTCGGCC GCGACCATGG GCGCGATGCC GCTGGCAGCG CTGGCGACCG 720 GCTGGCTGAT CGAAACCCGT GGCCTGGCCG GCGCGAGCCT GACCCTGGCG GCCGCGCTGG 780 CCGCATGCGC GCTGGCCGGC ACGATGCACC TGCATCTGCG CGCGACCGTC GCGCGGGCGG 840 CCAGCCCACG CGACGGCGCG GCGTCGCCGG CCGCGTTCGC GGCCGACGAC TGAAGCGTCT 900 TACTTGGTTT GCAGGCCGTA CATGAAGGTG TTCGGCACGC CGAGCAGCGG GCCGTCCGGC 960 CCCGGTATCG GCGCATTCCA CGGGCTGCCG TTGAGGTAGT TCGGCTGGCC CAGCGAATAC 1020 AGGCCGGCTC CGACCGACGA CAACGCGTTG AGCGCCTGCT TTTCGGTCGG CGCGGCGCCG 1080 TAGTACGTCA CGAAACTGCG CGTCGCGCCC GGCGCCAACG ATCCCAGGCG GAAGTCCATG 1140 TGCGAGCCGA GGTCGCCGGG GCCGTTGTCG GTCATCGCAC CGGTGGTCGG GTGCGCGGCC 1200 AACGGATCGA GCGAAGTGAA GCCGTTGTTG TTCCAGCCCA CCAGCAGCGG CGACGAACCG 1260 GCCAGGGTGA TGTACTCGGA GAAGGTGTTC GGCGGCACGT CGTAATCGAT GCCGCGGGTA 1320 TAGCGCAGGT CCTTCACCGT GCTGCGCCCG ATGTTCTGGA TCGACACCTC GACGCGGTAC 1380 AGGAACGGCG TCACCGCGGT CGGGATGTAA CGATGCACGA TGCGGAAGGT GCTGCCGACG 1440 GTGACCGTCG AGGTGGCCCG GTCGAACGGC GCGGTCGGTT GCACCGTCAG CGGCGCAGCC 1500 ACGACATTGG CGGTGGTGCC GCAACGCGAG GCATGCGCGG TGATCGGCAA CGCCGGGTCG 1560 GCGTTGGCCA CGCCCCAGCC TTCGCACGGC GCGCCGGGCG CGGAGGCTTC GCCGTTGGTC 1620 GACATCAGCC GCAGGCCGAC CAGGCTGGTG CCGTACAGGC CCATCGAGGG CTTGATCGCC 1680 GGACACTCGA TGTTGAGGTA GCCGGCGTCG TGCACGCCGA GCATGACGGT GCCGTTGTCG 1740 ATCACGCCCG GGCAGCCGTT CGGCGGGTCG CGCTCGCACG CGTACTTCCA GTCGCTGGCC 1800 ACGATCGGCT CGGTGCCGGC CGCGGACCAC TTGTCGATGC GCTTGGGCTC CGGCCGCGTG 1860 TCCTTGTACG GCAGGTCCAC GCCCATGCCC TCCGGCGTCC AGTCCTGCGC GCAGCGGGTC 1920 TTGAGCACCG GGTCGCTCTG CACGAAGTAG ACGTCCTGCG GATCGCCCGA GCCGTCGCGG 1980 TCGGCGCCGG TGTAGCCGGC GAGCACGAAA CGGTCGCCCT TGCGGTCGAT CGCGTAGATC 2040 GCTTCGCGCT TCTCGTTGCC GTAGAGGCGG GCCAGCGGGC CGGCGGCGTA TTGGCGCAGG 2100 TCGGCCGGAT TGGCGGCGAA GCTGAAGCCT TGCGTGCCGT AGATCGTGCC GGCGACGGCG 2160 AGCGCGCCGT CGTTGCCGTC GATGTTGCGG GCCTCGACTA CATCGAACGC GGTGAAGCCC 2220 TGCTTGTCGG GCGCATACCA GTCGGCCTGC GCCTTCGGAT CGCAGCTGGC GCGGCCGAAG 2280 CGCGCCAGGT ACGGCCGCGG CAGCGCGCCT TCCGCAGGCC CGCGCGCCTC GCCGACCATC 2340 ACGGTGTCGC CGCTGTAGCC GCGCGACAGC AAGGCGGTGA GGCCGTAGAA ATCCCGGTGC 2400 TCGCGCTCGT CGCCCAGGGT GGTGGCGCAC ACCGGCGCGC CGTTGGCGTC GGTGCGGAAC 2460 ATCAGCGCTT TGCGCAGATC GCCGCCCGAC GCGCCGCCGG CCACGACCAG GTCGGTGAAC 2520 GCACCGGTCG CGGCGAGGTT CTCGGTCACC GCGCGGAACT GCAGCGACGG CCATTCGCGG 2580 CCGTCGTAGC GCTGGTCCCA GATCACGTTG CCGCCCAGGC CCAGGCGCAC GATACGGCCG 2640 AAGGTGCGGC CTTGGCTGGG CACGATCTCG TCGCCGACGA CCACGATGTC GCCGTTCGCC 2700 GAGGAGGTCA GCGCGCCGCT CTGGATCAGG TCGTAGCCGG TGGCGATGGC ATTGCCGTCG 2760 GCGTTCTCCA ACAGCGTGGT CCAGACCATG TTGCCGGCGC AGTCCACGTT CATGACGTAG 2820 ATGCGCGAAC TGTCGCCCGC GCGCACCGTG CCGGTGACGG CGAAGCCGCG CCGTTCGCCC 2880 AGCTCGACGA TGCCCAGGCC GGAAGAGAAC TTGGCGCCGG CGATCGGATA CGCGCGTTGC 2940 CAGGTGCCCG GCGCGGCGCC GTCGCTGACG CCGTTGTCGT CCATGCGCGT GATCAGCACC 3000 TGGTCGGAAC TGCCGTTGCG GCGGGTGGCG ACGGTGACCG AGCCGCCGCC CGGGCACTGG 3060 GCGACCGACT TGACGTCCTC GGCGGCGTCG CGCCATTCGG GCTGCCCGTA ATACGTTTCG 3120 AAATTCTGCG CCTGCGCCAG GGGAGCGGCG AGCAGCAGAC CGGCCGCCAG CGTTGCGGCG 3180 CATCGCCGCA GGCCGGGCCG TGTGAGTCCC TTCGTGTCCA TGTCAGCCTC GTTTGCGGAA 3240 CCAGTCCGCG CAGTGGCCGG CGCGGCGTAA CGCGCCGGCG GAGTGGGCTT GCGTTGAACC 3300 ACATGCGCGA ACCATCGCGC GCATCGACCT TAGCGCGGCG CGCGACGACG GCGAAGTGAC 3360 GGGCGTGGGC AGGAAACGGG ACGCGGCGGG AAGATTTCGC AAGCCGCGTG GGCACGCGTT 3420 GCGACGCCGT TAGCGGATCG GCGTTAAAGC GCGCAGTGCG TCACGCGCGG CGACGCGTTG 3480 CGCCGGCGGT CGTTTTGGCG CGGTC 3505 // ID Contig1224 standard; DNA; UNC; 3699 BP. XX DE Contig1224.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..3699 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene 254..1252 FT /locus_tag="DeVSDRAFT_0097" FT /colour=13 FT CDS 254..1252 FT /locus_tag="DeVSDRAFT_0097" FT /product="conserved hypothetical protein-transmembrane prediction" FT /note="SPTR: A1FS99 Hypothetical protein. Stenotrophomonas maltophilia R551-3." FT /note="KEGG: rba:RB9964 hypothetical protein-transmembrane prediction " FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MAMQVPQYWAEARVQEKFGRGHVSGRVSLTVRRFGWSDASQVEAQTMADARARDAFERILAGEKLPSNEPRVPYDAEGLP FT IREEIVARHGEVVITRNSYGARCLNSPDVLFADVDFKPLPPVRLGGAMAALSLAAGVACGVLIHPVAGIVAAIATMLIVG FT TVRAKRAQRRHRSEGGGPEARALAPVKAFLAANPDWHLRVYRTPNGFRLLAMHRTFDPLDPQVHAFFEAIGADAYYALSC FT KHQHCFRARVSGKPWRMGLREHMPAWRSAWPIAEERRPERERWVAEYERTAEGYAACRFVERLGSNDYVSATYAVQRLHD FT DLCRAERNLPMA* FT " FT gene complement(1278..2849) FT /locus_tag="DeVSDRAFT_0098" FT /colour=13 FT CDS complement(1278..2849) FT /locus_tag="DeVSDRAFT_0098" FT /product="hypothetical protein" FT /note="SPTR: Q6DA32 Hypothetical protein. Erwinia carotovora subsp. atroseptica (Pectobacterium atrosepticum)." FT /note="KEGG: eca:ECA0431 hypothetical protein " FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MIVDLPSAPRLPAAWSWSLASALRTLVGNDDFVFGEDELGRAAGSLQRLPASQLLRLEESVRRSRNVYRSLELNNLLSGR FT KRQPISPWPTDRLPLGWLRNAGIERAEACLFVASCDHDGYLREYALRAFADWPGRLAMAAALIRCSDWADPVRRVAENLL FT RSLLERHPKLLFDLIELALALRERERYLGAWSVFVRPTLFAPQHGQSLWRTTSSDSVQVREWAYAASLAAGAANAEQVCT FT TALDDPHPRIARAALASAETVLAPDELDRQLRLTRRRRFPVLRGDALRLALRVESPCTLECLTDALFDRSSGPRRIAAYY FT LRERFGIEPRRVWRETLDAGDTPRARIALAALSDCAQSEDETSLRRWLLHALPRRRLQALRGLIRGNGPELADALAQALC FT DTDPQVAGEAFNAYRNGSARLTLPTLERAWTLAPQYRARWIFASELLDKWQTLDFLLGALSQSQPEPLEADIVARLQSLC FT NRRRFLFDSATSSSPPLLLERLKQAAPRLPGGLRHELSTLITR* FT " FT gene complement(2901..3125) FT /locus_tag="DeVSDRAFT_0099" FT /colour=13 FT CDS complement(2901..3125) FT /locus_tag="DeVSDRAFT_0099" FT /product="conserved hypothetical protein" FT /note="SPTR: Q8PIS9 Hypothetical protein XAC2816. Xanthomonas axonopodis pv. citri." FT /note="KEGG: xac:XAC2816 hypothetical protein " FT /note="COGs: COG2501 Uncharacterized conserved protein category=S" FT /note="InterPro IPR002942" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation="MQSTRFALDAGHDFVELNQLLKLVGLAHSGGTGKAIVASGAVRVDGQVELRKTCKIRAGQVVECEGMRVEVVAG*" FT misc_feature 671..739 FT /colour=11 FT /locus_tag="DeVSDRAFT_0097" FT /note="1 probable transmembrane helix predicted by FT TMHMM2.0" SQ Sequence 3699 BP; 613 A; 1222 C; 1286 G; 578 T; 0 other; GCAAGATGCT ACGCCGAACC GAAGCGCCGT CAAGTGCCCC TGCATTGCCG CATCGGCCTC 60 CTGCAGGAGC GGCGCAAGCC GCGACACCCG AAGCCCGGCC GAACCAGCGG CCCGGCCGCG 120 TCGAGACGCC GGAACCCATC GCCTTTCGCC GCACAGCGCA GCTTCCTCAG CAAGAGCGAA 180 GCGGCTTCAG TCCCGTAGCG CTCGCGCACC AAGCCCGCAC CGATACAATC GGGCCAGGCA 240 AAGGAGGGCG GCGATGGCGA TGCAGGTTCC GCAGTATTGG GCTGAGGCGC GGGTGCAGGA 300 GAAGTTTGGG AGGGGGCATG TCTCCGGGCG GGTTTCGCTT ACGGTGCGTC GCTTCGGTTG 360 GTCCGACGCC AGCCAGGTCG AAGCCCAGAC CATGGCCGAC GCGCGCGCCC GCGATGCGTT 420 CGAGCGCATC CTCGCCGGCG AAAAACTGCC GAGCAACGAA CCGCGCGTGC CCTACGACGC 480 CGAAGGCCTG CCGATCCGCG AGGAGATCGT CGCCCGCCAC GGCGAGGTGG TGATCACGCG 540 CAACAGCTAC GGCGCACGCT GTCTCAATTC GCCGGACGTC TTGTTCGCCG ATGTCGATTT 600 CAAGCCGCTG CCGCCGGTGC GCCTGGGCGG GGCGATGGCC GCGCTGTCGC TCGCCGCCGG 660 CGTGGCCTGC GGCGTGCTGA TCCATCCGGT CGCCGGCATC GTCGCCGCGA TCGCGACGAT 720 GCTGATTGTC GGCACGGTCC GCGCGAAGCG CGCGCAGCGC CGCCACCGCA GCGAAGGCGG 780 CGGCCCGGAA GCGCGCGCGC TGGCGCCGGT CAAGGCGTTC CTGGCCGCGA ACCCGGACTG 840 GCACCTGCGC GTCTACCGCA CGCCGAACGG CTTCCGCCTG CTGGCGATGC ACCGCACCTT 900 CGACCCGCTC GATCCGCAGG TGCATGCGTT CTTCGAAGCG ATCGGCGCGG ACGCTTACTA 960 CGCGCTGTCG TGCAAGCACC AGCATTGCTT CCGCGCCCGG GTCAGCGGCA AGCCGTGGCG 1020 GATGGGCCTG CGCGAGCACA TGCCGGCGTG GCGCAGCGCC TGGCCGATCG CCGAGGAACG 1080 CAGGCCCGAG CGCGAGCGCT GGGTGGCCGA GTACGAACGC ACGGCCGAAG GCTACGCCGC 1140 CTGCCGTTTC GTCGAGCGGC TGGGCAGCAA CGACTACGTG TCGGCGACTT ATGCGGTGCA 1200 GCGTCTGCAC GACGATCTGT GCCGGGCCGA GCGTAATTTG CCGATGGCGT GAGATCGGAC 1260 GGCCGATCCG TATTCGTTTA GCGCGTAATC AGCGTCGAAA GTTCATGACG TAAGCCGCCG 1320 GGCAGACGCG GCGCGGCCTG TTTCAGTCGC TCGAGCAGTA GCGGCGGTGA AGAGCTGGTG 1380 GCCGAGTCGA ACAGAAAACG CCTGCGATTG CACAGCGATT GCAACCGGGC GACGATGTCG 1440 GCCTCCAGTG GCTCCGGCTG GGATTGCGAC AGCGCACCCA GCAGAAAATC CAGGGTCTGC 1500 CACTTGTCCA GCAGTTCGCT GGCGAAAATC CATCGCGCGC GGTACTGCGG AGCCAGCGTC 1560 CAGGCGCGTT CCAGTGTGGG CAGAGTCAAC CGGGCGCTGC CGTTGCGATA GGCGTTAAAA 1620 GCTTCGCCCG CTACCTGTGG ATCGGTATCG CAAAGGGCTT GCGCCAGGGC ATCGGCCAAC 1680 TCCGGGCCAT TGCCGCGAAT CAAGCCGCGT AATGCCTGCA GTCGTCTGCG CGGAAGTGCG 1740 TGCAGCAGCC ACCGCCTGAG ACTGGTTTCG TCTTCGCTCT GAGCGCAATC GCTCAAGGCT 1800 GCCAGTGCGA TGCGTGCCCG CGGTGTATCT CCGGCATCCA GGGTTTCGCG CCAGACCCGT 1860 CTGGGCTCTA TGCCGAATCG TTCGCGCAGA TAATAAGCGG CGATTCGGCG CGGACCGGAG 1920 GAGCGGTCGA ATAGAGCGTC AGTCAGGCAT TCGAGCGTGC AGGGCGACTC TACTCGCAAG 1980 GCCAGCCGCA GAGCATCTCC GCGCAAGACG GGGAAGCGCC TGCGTCGGGT CAGACGCAGT 2040 TGACGGTCGA GTTCGTCCGG TGCCAGTACA GTCTCGGCGC TCGCCAGCGC GGCGCGGGCG 2100 ATGCGCGGAT GCGGATCGTC GAGCGCGGTG GTGCAGACCT GTTCGGCGTT AGCGGCACCC 2160 GCGGCGAGCG AGGCGGCGTA TGCCCATTCG CGTACCTGCA CGGAGTCGGA TGAAGTGGTG 2220 CGCCACAGCG ATTGCCCGTG CTGCGGCGCA AATAGCGTCG GACGGACGAA GACGCTCCAA 2280 GCGCCCAGGT AGCGCTCGCG TTCGCGTAAC GCCAACGCCA GTTCGATCAG GTCGAACAAG 2340 AGCTTCGGGT GACGTTCGAG CAGGGAGCGC AGCAAGTTCT CGGCGACGCG CCGCACCGGA 2400 TCGGCCCAGT CGCTGCAACG AATCAGCGCT GCGGCCATGG CCAGACGGCC CGGCCAGTCG 2460 GCGAAGGCGC GCAGTGCGTA TTCGCGCAGA TAGCCGTCGT GGTCGCAGCT GGCGACGAAC 2520 AGGCAGGCTT CTGCACGCTC GATGCCGGCG TTCCTTAGCC ACCCCAGGGG CAATCTATCG 2580 GTGGGCCACG GTGATATGGG CTGGCGCTTT CGCCCGCTCA ACAGGTTGTT GAGTTCGAGC 2640 GATCGGTAGA CGTTGCGGCT CCTGCGTACC GATTCCTCAA GCCGCAGCAG TTGGGAGGCT 2700 GGCAGGCGCT GCAACGAGCC CGCGGCACGT CCCAGTTCGT CTTCGCCGAA GACGAAATCG 2760 TCGTTGCCGA CGAGCGTACG CAAGGCCGAG GCCAGAGACC AGCTCCACGC CGCCGGCAGC 2820 CGCGGCGCGC TGGGTAAGTC GACGATCATT CTTGAGCTCC TCGAATCGTG ACCGGAGCCG 2880 ATCTTGCGAC GCGGCGGACC TCAGCCCGCC ACCACTTCAA CCCGCATCCC CTCGCACTCC 2940 ACCACCTGCC CCGCACGGAT CTTGCAGGTC TTGCGCAGTT CCACCTGTCC GTCCACCCGC 3000 ACCGCGCCGC TGGCGACGAT GGCCTTGCCG GTGCCGCCGC TGTGGGCGAG GCCGACCAGC 3060 TTGAGCAGTT GGTTGAGTTC GACGAAGTCG TGGCCGGCGT CGAGGGCGAA GCGGGTCGAT 3120 TGCATGGCGA TGGGGCTGGA ATGCGGTGGC GGGCAGGCAG GGTCGCAGCG CTGAGACCTG 3180 GGCGCAAGAC GTTTGCGCGT CCGGCGGCGT ACTCTCGGGC CAGCGGCGCC CGCGCGGGCG 3240 CCGTCCAGCC CATCTTTCGA GGTCGACGAT GAAGCGAGCC CAGTACGAAC GGCGCGGCCC 3300 GGTGCCGCAG GACGTGATCG AGGCGGTCGA GTTCCAGACG CCGCCGTTGG CGGCCGGACA 3360 GGTCTTGATC GAAGTGTTGG CCGCGCCGAT CAATCCCTCC GACGTGCTGA CCCTGACCGG 3420 CGACTACGGC CTGCTGCCGC CGCTGCCGGC GGTGGGCGGC AATGAGGGCG TGGGCCGGGT 3480 GGTCGAGCTC GGGCCCGAGG TGACCCAGCT CAAGGTCGGC CAGACCGTGC TGCTGCCGAT 3540 CCAGGGCGGC AGTTGGGCCA CGCACATGGT CGGCACCGCC AGGCACCTGA TCGCGCTGCC 3600 CGATGGCGCC GATCCCAAGC AACTGGCGAT GATCACCATC AACCCGCCGA CCGCGCTGCT 3660 GATGCTCAGC GACATCGTCG CGCTGGAACC GGGCGACTG 3699 // ID Contig1229 standard; DNA; UNC; 4404 BP. XX DE Contig1229.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..4404 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene 3..848 FT /locus_tag="DeVSDRAFT_0100" FT /colour=11 FT CDS 3..848 FT /locus_tag="DeVSDRAFT_0100" FT /product="hydrolase of the alpha/beta superfamily-like" FT /note="SPTR: Q8PDS5 Hypothetical protein XCC0260. Xanthomonas campestris pv. campestris." FT /note="KEGG: xcb:XC_0270 hypothetical protein " FT /note="COGs: COG2945 hydrolase of the alpha/beta superfamily category=R" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT LFCGRAFRPDALRSDATAPTTRPAPICPPWPPSPRTRRRNTRSAPPRIMRGMTTPAFPSDASAALTLAGPAGAIEAIVEA FT PEAPPRPIVAIVCHPLPTEGGTMHNKVVTMAARSLRECGAATVRFNFRGVGQSQGEFDQGEGECDDLRAVAAWVRAQRPD FT AQLWLAGFSFGAYVSLRMADELRPRLLLSIAPPAGRWDFDRIAPPSGYPWIVIQGEADEIVDPEAVYAWIAGLRQPPELV FT RMPDTSHFFHRRLIDLRGAIKNSVRAHLPPPIDDAGDATPA* FT " FT gene 1213..3021 FT /locus_tag="DeVSDRAFT_0101" FT /colour=11 FT CDS 1213..3021 FT /locus_tag="DeVSDRAFT_0101" FT /product="AFG1-family ATPase" FT /note="PFAM: AFG1-family ATPase" FT /note="SPTR: Q5GUH5 ATPase. Xanthomonas oryzae pv. oryzae." FT /note="KEGG: xom:XOO_4137 ATPase " FT /note="COGs: COG1485 ATPase category=R" FT /note="InterPro IPR005654" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT VDPQRRHRHPRAQARRRRALRIRAASQLRRQHRPAVRPRAQGRRQRDGVQGPGRQRRLRTDLPPLPPADPDRAAAHRQRL FT RRRHGRALQRPLPARTAGGGGDQPLDPARPGRGAQARRRCAPAQAAGRRLRRAGRAHGRRRHPHRRRTQGPGHQRLRARR FT RGRHARAADPGRRRPPMGGDPRRGQARPRRTALLQLRPGLDRQAAGGGGRLVGRLPGTGAGAADVGRRPRAAAVSANLRN FT DAATTPSQAYAAGVARGDWGDDPAQHPALRELDRIQAQLLSAPEPGLFDRLRGKPRDGVRGLYLWGGVGRGKTFLIDLFY FT EQLPIQEKRRTHFHRFMREVHAQLRAHAGQSDPLAKIAREWRDSLRVLVLDEFFVIDIGDAMLLGRLLERLFAEGVTLVT FT TSNIDPPNLYADGLQRDRFKPAIAQIQAHCQVLLLDSQQDYRLRALTRTAVYRAPLDDESEAWLAGRWQELAACCAPESG FT PLRIDDRDIPVRARADGHIWFDFAALCEGPRAASDYIEIATEYHTVLLGGIPLFDGRNDDPARRFVNLIDEFYDRHVNLV FT CTAADAPTALYRSERLAGAFERTASRLIEMQSAEYLAREHRG* FT " FT gene 3301..3930 FT /locus_tag="DeVSDRAFT_0102" FT /colour=0 FT CDS 3301..3930 FT /locus_tag="DeVSDRAFT_0102" FT /product="histone family protein DNA-binding protein" FT /note="PFAM: histone family protein DNA-binding protein" FT /note="SPTR: A1FX08 Histone-like DNA-binding protein. Stenotrophomonas maltophilia R551-3." FT /note="KEGG: xcv:XCV3071 bacterial DNA-binding protein " FT /note="COGs: COG0776 Bacterial nucleoid DNA-binding protein category=L" FT /note="InterPro IPR000119" FT /codon_start=1 FT /transl_table=11 FT /colour=0 FT /translation=" FT MLFSRDFSHPAGARGRGRSGAGTGAARGFSRTRGRDRTRATEKPAFFYAKALGDAAGLPYIPPCRGVNQATHPSNAVLPE FT NTMATKKTAAKKKAAPKAAAKTAAPKPIKEVLSKSGLVAHLAEATGVVAKDVRSILGALEGAVHASINKKGAGAFTLPGI FT LKITAVSVAAKPKRKGINPFTKEEQWFAAKPATVKVKVRPLKKLKDAAL* FT " SQ Sequence 4404 BP; 683 A; 1676 C; 1464 G; 581 T; 0 other; CGCTGTTTTG TGGGAGGGCC TTCAGGCCCG ACGCCTTGCG CTCCGACGCG ACCGCCCCCA 60 CCACCCGACC CGCACCGATT TGCCCGCCTT GGCCGCCATC GCCGCGCACA CGCCGCCGTA 120 ACACCCGGTC CGCGCCGCCC CGTATCATGC GCGGCATGAC CACCCCCGCC TTTCCCAGCG 180 ATGCGAGCGC CGCGCTGACC CTGGCCGGCC CGGCCGGGGC GATCGAGGCG ATCGTGGAAG 240 CGCCCGAAGC GCCGCCGCGC CCGATCGTCG CCATCGTCTG CCACCCGCTG CCGACCGAGG 300 GCGGGACCAT GCACAACAAA GTCGTGACCA TGGCCGCGCG CTCGCTGCGC GAATGCGGTG 360 CGGCCACGGT GCGCTTCAAC TTCCGCGGCG TCGGCCAATC GCAGGGCGAG TTCGACCAGG 420 GCGAAGGCGA ATGCGACGAC CTGCGCGCGG TCGCCGCCTG GGTGCGCGCG CAGCGCCCCG 480 ACGCGCAGCT GTGGCTGGCC GGTTTCAGCT TCGGCGCCTA CGTCTCGCTG CGCATGGCCG 540 ACGAACTGCG GCCGCGGCTG CTGCTGTCGA TCGCGCCGCC GGCCGGACGC TGGGACTTCG 600 ACCGCATCGC CCCGCCGTCG GGCTATCCGT GGATCGTGAT CCAGGGCGAA GCCGATGAGA 660 TCGTCGATCC CGAGGCGGTC TACGCCTGGA TCGCCGGCCT GCGCCAGCCG CCGGAACTGG 720 TGCGCATGCC CGACACCTCG CATTTCTTCC ATCGCCGCCT GATCGACCTG CGCGGCGCGA 780 TCAAGAACTC GGTGCGCGCG CACCTGCCGC CGCCGATCGA CGACGCCGGC GACGCGACGC 840 CCGCCTGACC CAGGACGCTT CCCCCATGCG CCTCTCCCCC CGCCTGGCGC TGCCGCTGGC 900 CGCCGCGCTC GCCGCGGCCG CGCTGCCGGC CGCCGCTGCC GGCATCGACT GCGCCAAGGC 960 CGCCAACCGC AACGAACAGA CCATCTGCGC CGACCCGGTG CTGCGCCAGC GCGACAGCGA 1020 CCTCGCCGCC GCCTACGCCA CCGCGCGCAA GGCCAGCGAC TACCGCGGCG AACTCAAGAA 1080 AGACCAGGAA GCCTGGCTGC GCGAGCGCGA CCGCTGCGAC GGCCAGCTGC GCTGCCTGCG 1140 CATGGCCTAC GTCGGCCGTC TCACCGAACT CGGGCCGGCC GCGGTGTCGG GCAAGTTCGA 1200 CTGGAGCGGC GAGTGGACCC GCAGCGACGG CACCGCCACC CTCGCGCTCA AGCCCGGCGA 1260 CGGCGAGCGC TACGAATTCG AGCTGCAAGC CAGCTCCGGC GCCAACACCG GCCTGCTGTC 1320 AGGCCGCGCG CGCAAGGCCG GCGACAGCGA GATGGCGTTC AAGGGCCAGG GCGACAACGC 1380 CGACTGCGAA CTGACCTTCC ACCGCTTCCA CCGGCAGATC CAGATCGAGC AGCAGCACAC 1440 CGGCAGCGAC TGCGGCGCCG GCATGGGCGT GCACTTCAGC GGCCGCTACC TGCCCGGACT 1500 GCCGGCGGCG GTGGCGACCA GCCACTGGAC CCTGCTCGAC CTGGGCGTGG TGCTCAAGCC 1560 CGAAGACGAT GCGCGCCTGC GCAAGCTGCT GGGCGACGAC TACGACGCGC TGGTCGAGCG 1620 CATGGACGTC GCCGACACCC GCACCGACGA CGAACTCAAG GCCCAGGTCA CCAACGGCTA 1680 CGTGCGCGGC GTCGCGGTCG ACATGCGCGC GCTGCTGATC CAGGCCGCCG ACGGCCGCCA 1740 ATGGGCGGCG ATCCGCGGCG AGGACAAGCA AGGCCACGCC GAACTGCGCT ACTACAGCTC 1800 CGACCCGGCC TGGACCGGCA AGCTGCCGGC GGCGGTGGAC GCCTGGTCGG ACGGCTACCA 1860 GGAACAGGTG CCGGTGCGGC TGATGTCGGC CGGCGGCCGC GTGCTGCGGC CGTGAGCGCG 1920 AACTTGCGCA ACGACGCGGC GACGACGCCG TCGCAGGCCT ACGCCGCCGG CGTCGCCCGC 1980 GGCGACTGGG GCGACGATCC GGCCCAGCAT CCGGCTCTGC GCGAGCTCGA CCGGATCCAG 2040 GCGCAACTGC TGTCCGCGCC CGAACCCGGC CTGTTCGACC GCCTGCGCGG CAAGCCGCGC 2100 GACGGCGTGC GCGGGCTGTA CCTGTGGGGC GGCGTCGGCC GCGGCAAGAC CTTCCTGATC 2160 GACCTGTTCT ACGAGCAGTT GCCGATCCAG GAAAAGCGCC GCACCCACTT CCACCGCTTC 2220 ATGCGCGAGG TCCACGCCCA GTTGCGCGCC CACGCCGGCC AGAGCGATCC GCTGGCCAAG 2280 ATCGCGCGCG AATGGCGCGA CAGCCTGCGG GTGCTGGTGC TGGACGAATT CTTCGTCATC 2340 GACATCGGCG ATGCGATGCT GCTCGGACGC CTGCTCGAGC GCCTGTTCGC CGAAGGCGTT 2400 ACCCTGGTCA CCACCTCCAA CATCGACCCG CCCAACCTCT ACGCCGACGG CCTGCAGCGC 2460 GACCGCTTCA AGCCGGCGAT CGCGCAGATC CAGGCGCATT GCCAGGTGCT GCTGCTCGAC 2520 AGCCAGCAGG ACTACCGGCT GCGCGCGCTG ACCCGCACCG CGGTGTACCG CGCGCCGCTG 2580 GACGACGAAT CGGAGGCCTG GCTGGCCGGG CGCTGGCAGG AACTGGCGGC CTGCTGCGCG 2640 CCCGAATCCG GGCCGCTGCG CATCGACGAC CGCGACATCC CGGTGCGCGC GCGCGCCGAC 2700 GGCCACATCT GGTTCGACTT CGCCGCGCTG TGCGAGGGCC CGCGCGCGGC CAGCGACTAC 2760 ATCGAGATCG CCACCGAGTA CCACACCGTG CTGCTCGGCG GCATCCCGCT GTTCGACGGC 2820 CGCAACGACG ACCCGGCGCG GCGTTTCGTC AATCTGATCG ACGAGTTCTA CGACCGCCAC 2880 GTCAACCTGG TGTGCACCGC CGCCGACGCG CCGACCGCGC TGTACCGCAG CGAGCGCCTG 2940 GCCGGCGCGT TCGAGCGCAC CGCCTCGCGC CTGATCGAGA TGCAATCGGC CGAATACCTG 3000 GCGCGCGAAC ACCGCGGCTG AGCCGCGCCG GCGGCCGCAG CGCGCGGCCG GCGGCGTGAA 3060 GATCGCGTGC ATTCCATTCC TGCGAATTCC GCTCCATTTC AGCCCGTTCG GCATGCTCGC 3120 CGGCGCGCGC AACCGCGCCG GCATCCGCGC ATCGCCGCGC AACCGCGCGC CTGCGCGGCG 3180 CTTCGCGCGC GTTCGGGCCG GCCGGCGACT GAATGTCGCC GCATCGCCGC CGCAGCCGCG 3240 GCCGGCACGC GCGAACGGCG CGCGCAAAGT TTCGCTGCGC CGCCGCACGA ATCGCCGAAC 3300 ATGCTGTTTT CAAGGGATTT TTCGCATCCC GCCGGCGCGC GCGGACGCGG CCGCAGCGGC 3360 GCCGGAACCG GCGCGGCGCG GGGTTTTTCC CGCACGCGCG GACGCGACCG GACGCGCGCG 3420 ACTGAAAAAC CCGCATTTTT TTACGCCAAA GCTCTTGGCG ACGCGGCGGG CTTGCCCTAC 3480 ATTCCGCCTT GCCGAGGGGT TAACCAGGCA ACCCATCCAT CCAACGCCGT ACTACCGGAA 3540 AACACTATGG CTACGAAAAA GACCGCTGCA AAGAAGAAGG CCGCGCCGAA GGCTGCCGCC 3600 AAGACCGCCG CTCCGAAGCC GATCAAGGAA GTGCTGAGCA AGTCGGGCCT GGTCGCGCAC 3660 CTGGCCGAAG CCACCGGCGT CGTCGCCAAG GACGTCCGCT CGATCCTCGG CGCGCTCGAA 3720 GGCGCCGTGC ACGCCTCGAT CAACAAGAAG GGCGCCGGCG CGTTCACCCT GCCGGGCATC 3780 CTGAAGATCA CCGCCGTCAG CGTCGCGGCC AAGCCGAAGC GCAAGGGCAT CAACCCGTTC 3840 ACCAAGGAAG AGCAGTGGTT CGCCGCCAAG CCGGCCACCG TCAAGGTGAA GGTGCGCCCG 3900 CTCAAGAAGC TCAAGGACGC CGCGCTCTGA TCTGCGGATG CGGCGCGCTT CGGCTCGCCG 3960 CATCGCACGT CTGCTTCGCC GGACGCCGCC TTCGGGCGGC GTTCGCGTTT GCGCCGTCCG 4020 GCGGCGCGCT GCGCAGCCGC ATGCCGCGCT GGGCGGCTCC CGTATCGCCC CTCGTCGCCG 4080 GCGCTATGCC GCGACAGAAA ATGAACAGGC TGAAGCGTGC GTTTAGCGCT GTCCGCGCGC 4140 AGGCGCCGTG GCATAGTGCG CGCATTCGCC GTGGAGTCGT GTCGTGGATC CGATCAGCCT 4200 GGAAGACTTG GCCTTGCTGG ATGTATTGCA GCGTATCGAC CACGGCCACG CGCCGGACGA 4260 TCACTCCCGC ACCTTGCGCG AACGCCTGAT CGAATCGGCG CTGGCGCACG CCGACGAAGA 4320 CGGCACGCTG GCGCTGACCG ACGCGGGCGT TGAGCGCTGC AAATCGCTGC GCCACCGCAT 4380 GGCGGCCGAC GCCGAAGCCG CGCA 4404 // ID Contig122 standard; DNA; UNC; 4102 BP. XX DE Contig122.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..4102 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene 2..607 FT /locus_tag="DeVSDRAFT_0091" FT /colour=13 FT CDS 2..607 FT /locus_tag="DeVSDRAFT_0091" FT /product="hypothetical protein" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT GWCSRPCARRRIGICTTAPGKPPATGAGLSRSARSGCYCSVRTRRTDPNARPAMAYEPIHMTWDYWDGPRTGIADCEGRP FT HYFACQFDPQQEEYRDLFALTPLDAETWAWAQEHWAIWQRWEAEVNAGRLTPQSHPRHGQFDPRYNELEALIDAGIDRLR FT AQATRRRGALRRRAVEGELFPGQWNRYEIEWSAPLDDDAAD* FT " FT gene 657..1124 FT /locus_tag="DeVSDRAFT_0092" FT /colour=13 FT CDS 657..1124 FT /locus_tag="DeVSDRAFT_0092" FT /product="hypothetical protein" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MTIEQGRDRSPPGAATSAADCRLVLLSALLPLLAASCAEPAGCASEPATHPKGQCRARYYQTDFGDRGVTQAMVECASDA FT GNLGGNIVAIPSLRAGIGLRWLDPQTLEVALAPGGRRDDMRSQDVYAGLRLRYVYRDLRPDEPAWAGCGLAARTR* FT " FT gene complement(1207..2646) FT /locus_tag="DeVSDRAFT_0093" FT /colour=9 FT CDS complement(1207..2646) FT /locus_tag="DeVSDRAFT_0093" FT /product="MATE efflux family protein" FT /note="TIGRFAM: MATE efflux family protein" FT /note="PFAM: multi antimicrobial extrusion protein MatE" FT /note="SPTR: Q1CWJ1 MATE efflux family protein. Myxococcus xanthus (strain DK 1622)." FT /note="KEGG: mxa:MXAN_7119 MATE efflux family protein " FT /note="COGs: COG0534 Na+-driven multidrug efflux pump category=V" FT /note="InterPro IPR002528" FT /codon_start=1 FT /transl_table=11 FT /colour=9 FT /translation=" FT MTHDSPAAQAADATDSTAPQSLWRELRDAVRGTDADYTKIPLRRAVFLLAVPMVLELVLESTFAVVDIFFVSKLGPSAVA FT TVGLTESYLFLLYAVAMGLAMAVTAVIARRIGEGKREEAAFTAVQAIAIALLVSIVPALAGIFYAQDLLRLMGADAWSIE FT HGYRYTQWMLGSNAVIMLLFVINAIFRGAGDAAISMRVLWLSNGLNIVLCPLLIFGPGPFPALGIEGAAIATCIGRGTGV FT LYQLWALFRGGKHIRVTMAQLAWRGAMLWNIVRTSLGGIGQMIVAMTAWIFLMRILATIGSEAVAGATIAIRIMMFTMMP FT AWGMSNAAATLVGQNLGAGHADRAEASVWHIGWYNMGYLIVVSVLFFAFPQQLVGFFSTDPEVVKVGAEWLRILSYSFFI FT YGWWMVTVQAFNGAGDTVTPTKINVVFFWLIQIPLSYWLAIHLGWKELGVFWAVFVSETSVGVFTLWLFTRGRWKNASV* FT " FT gene 2928..3371 FT /locus_tag="DeVSDRAFT_0094" FT /colour=13 FT CDS 2928..3371 FT /locus_tag="DeVSDRAFT_0094" FT /product="Activator of Hsp90 ATPase 1 family protein" FT /note="PFAM: Activator of Hsp90 ATPase 1 family protein" FT /note="SPTR: Q3SF07 Hypothetical protein. Thiobacillus denitrificans (strain ATCC 25259)." FT /note="KEGG: tbd:Tbd_0651 hypothetical protein " FT /note="COGs: COG3832 Uncharacterized conserved protein category=S" FT /note="InterPro IPR013538" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MSGTVRLLRVFTSPPERVYRAFLDPAALCKWLPPDGFTCTVHELDARVGGRYRMSFTNFSTGNGHSFGGTYLELVPNERI FT VHDDRFDDPNLPGTMVTTITFRAVSCGTEVQVVQEGIPEVIPVEQCHLGWQESLTLLERLVEPTIPE* FT " FT misc_feature complement(order(1237..1302,1315..1371,1411..1476, FT 1537..1593,1657..1722,1768..1833,1897..1962,1993..2049, FT 2086..2151,2212..2277,2314..2379,2440..2505)) FT /colour=11 FT /locus_tag="DeVSDRAFT_0093" FT /note="12 probable transmembrane helices predicted by FT TMHMM2.0" SQ Sequence 4102 BP; 734 A; 1473 C; 1333 G; 562 T; 0 other; TGGCTGGTGT TCGCGGCCAT GTGCGCGGCG GCGTATTGGT ATCTGCACAA CGGCGCCGGG 60 TAAACCGCCG GCCACCGGCG CCGGGCTCTC GCGCTCGGCT CGCAGCGGCT GCTACTGTTC 120 CGTTCGTACT CGACGAACCG ACCCGAACGC CCGCCCCGCC ATGGCCTACG AACCCATCCA 180 CATGACCTGG GACTACTGGG ACGGCCCGCG CACCGGCATC GCCGATTGCG AAGGCCGTCC 240 GCATTATTTC GCCTGCCAGT TCGACCCGCA GCAAGAGGAA TACCGCGATC TGTTCGCGCT 300 CACCCCGCTC GACGCGGAAA CCTGGGCCTG GGCGCAGGAG CATTGGGCGA TCTGGCAACG 360 CTGGGAGGCC GAGGTCAACG CCGGCCGGCT GACCCCGCAA AGCCATCCCA GGCACGGCCA 420 GTTCGACCCG CGCTATAACG AACTCGAAGC GCTGATCGAC GCCGGCATCG ACCGCCTGCG 480 GGCGCAGGCC ACGCGCCGGC GCGGCGCGCT GCGGCGGCGC GCGGTCGAGG GCGAGCTGTT 540 TCCCGGGCAG TGGAACCGTT ACGAGATCGA ATGGTCGGCG CCGCTGGATG ACGACGCGGC 600 CGACTGAGCG CCGCCGGCCG CCATCGTCGA ACTCAACACC GAATCCGGGA ACGCAGATGA 660 CCATTGAGCA AGGACGCGAC CGCTCCCCCC CTGGCGCTGC AACCTCAGCA GCCGACTGCC 720 GCCTCGTCTT GCTTAGCGCG CTGCTGCCAT TGCTGGCCGC GTCCTGCGCC GAGCCGGCCG 780 GCTGCGCCAG CGAACCGGCC ACGCACCCGA AGGGCCAGTG CCGCGCCCGC TACTACCAGA 840 CCGATTTCGG CGACCGCGGC GTGACCCAAG CCATGGTCGA GTGCGCGAGT GACGCCGGCA 900 ACCTCGGCGG CAACATCGTC GCGATCCCGT CGCTGCGCGC CGGCATCGGC CTGCGCTGGC 960 TCGATCCGCA GACATTGGAA GTCGCGCTGG CGCCCGGCGG CCGCCGCGAC GACATGAGGA 1020 GCCAGGACGT CTACGCCGGC CTGCGCCTGC GCTACGTCTA TCGCGACCTG CGCCCCGACG 1080 AGCCGGCCTG GGCCGGCTGC GGCCTCGCCG CTCGCACGCG CTGAGCGCGG CGACTGCAGC 1140 CCCGACGCTT CCCCGCACCG GTCACCGCGA CAGGTGCGCA GGAAGCATCG GGCCGAACAC 1200 AGCACGCTAC ACGCTCGCGT TCTTCCAACG CCCGCGCGTG AACAGCCACA GCGTGAACAC 1260 GCCGACCGAC GTCTCGGACA CGAACACGGC CCAGAACACG CCCAGCTCCT TCCAGCCCAG 1320 GTGGATCGCC AGCCAGTACG ACAGCGGGAT CTGGATCAGC CAGAAGAACA CCACGTTGAT 1380 CTTGGTCGGG GTGACGGTGT CGCCGGCGCC GTTGAAGGCC TGCACCGTCA CCATCCACCA 1440 GCCATATATG AAGAACGAGT ACGACAGGAT CCGCAGCCAC TCGGCGCCGA CCTTGACCAC 1500 TTCCGGATCG GTGCTGAAAA AGCCGACCAG CTGCTGCGGG AAGGCGAAGA ACAACACCGA 1560 GACCACGATC AGATAGCCCA TGTTGTACCA GCCGATATGC CACACCGAGG CTTCGGCGCG 1620 GTCGGCGTGG CCGGCGCCGA GGTTCTGCCC GACCAGGGTC GCGGCGGCGT TGGACATGCC 1680 CCAGGCCGGC ATCATCGTGA ACATCATGAT GCGGATGGCG ATGGTCGCGC CGGCCACCGC 1740 CTCGCTGCCG ATCGTGGCGA GGATGCGCAT CAGGAAGATC CACGCGGTCA TCGCCACGAT 1800 CATCTGGCCG ATGCCGCCGA GCGAGGTGCG CACGATGTTC CACAGCATCG CCCCGCGCCA 1860 GGCCAACTGC GCCATCGTCA CCCGGATGTG CTTGCCGCCG CGGAACAGCG CCCACAACTG 1920 ATACAGCACA CCGGTGCCGC GGCCGATGCA GGTGGCGATC GCCGCGCCTT CGATGCCCAG 1980 CGCCGGGAAC GGCCCGGGGC CGAAGATCAG CAGCGGGCAC AGCACGATGT TGAGGCCGTT 2040 GGACAGCCAC AGCACGCGCA TGGAAATGGC CGCGTCGCCA GCGCCGCGGA AGATCGCGTT 2100 GATCACGAAC AACAGCATGA TCACCGCGTT GCTGCCGAGC ATCCACTGGG TGTAGCGGTA 2160 GCCGTGCTCG ATGCTCCAGG CGTCGGCGCC CATCAACCGC AGCAAGTCCT GGGCGTAGAA 2220 GATGCCGGCC AACGCCGGCA CGATCGACAC CAGCAAGGCG ATCGCGATGG CCTGCACCGC 2280 GGTGAACGCG GCCTCCTCGC GCTTGCCCTC GCCGATGCGC CGCGCGATCA CCGCGGTGAC 2340 CGCCATCGCC AGGCCCATCG CCACCGCGTA AAGCAGGAAC AGGTAGCTCT CGGTCAGCCC 2400 GACCGTGGCC ACCGCCGAGG GGCCGAGCTT GGAGACGAAG AAGATGTCGA CCACGGCGAA 2460 GGTCGATTCC AGCACCAGCT CGAGCACCAT CGGCACGGCC AGCAGGAACA CCGCGCGGCG 2520 CAGCGGGATC TTGGTGTAAT CGGCGTCGGT GCCGCGGACC GCGTCGCGCA GTTCGCGCCA 2580 CAACGATTGC GGAGCGGTGG AGTCTGTGGC ATCGGCGGCC TGGGCCGCCG GAGAGTCGTG 2640 GGTCATCGCG TGGTCCCTGC GTTCGATCGC ACCGACGCAT GTTAGGGCCT CATGCCCGTC 2700 TCGCCAGTGA CAACAGTACG ACGTTGCGCA GGATCCAGAA TCGACATCTC AATCGGTGAG 2760 ATCGCGCAAC CGCGACGCGC GTTGGCGCAT CTGTTGCAGT GCAACCTGAA CCGCGCTCCA 2820 CGCTTGCCGG GTTTTCGCTG GTCGCCGTCG CGGGCTTGTC GATCCGGCGC CCGCCCGTTC 2880 GTCGCCCCAG TGAGGACCAC GCCTCGCCAC CCATCTGGAG AACCACCATG TCCGGTACCG 2940 TCCGCCTGCT CCGCGTCTTC ACCAGCCCGC CCGAGCGCGT CTACCGCGCC TTCCTCGACC 3000 CCGCCGCGCT GTGCAAATGG CTGCCGCCGG ACGGCTTCAC CTGCACCGTG CACGAGCTCG 3060 ACGCCCGCGT CGGCGGCCGC TACCGCATGA GCTTCACCAA CTTCAGCACC GGCAACGGCC 3120 ACAGCTTCGG CGGCACTTAC CTGGAGCTGG TGCCGAACGA GCGCATCGTC CACGACGACC 3180 GCTTCGACGA CCCCAACCTG CCCGGCACCA TGGTCACCAC CATCACCTTC CGCGCCGTGT 3240 CCTGCGGCAC CGAGGTGCAA GTGGTGCAGG AAGGGATTCC CGAGGTGATC CCGGTCGAGC 3300 AATGCCATCT CGGGTGGCAG GAGTCGCTGA CATTGCTGGA GCGGTTGGTG GAGCCGACGA 3360 TTCCGGAGTG AGTTGAGCTG CGCCGTGATC GCGGCGGGCG GAAACGAAAA CGGCGGCCTC 3420 CTGTCGAGGC CGCCGTCGCG TTCCAGACTG TGGGAGCGGC GCGAGCCGCG ACCGCGACAA 3480 CGCAGCTACG ACGAAAGCCC CGTCGCGAGC AGACACCCCG CAGTCGCGAC TTGCGTCGCT 3540 CCTACAGGGA GCCGTCGCAA CATCGCGGCG GCCGGAAACG AAAACGGCGG CCCCATGACG 3600 AGGCCGCCGT CGCGTTCCAG ACTGTAGGAG CGGCGCGAGC CGCGACCGCG ACAACGCAGC 3660 TATGACGAAA TGACCGCCGC GAGCGGATAC TCCGCGGTCG CGACTTGCGT CGCTCCTACA 3720 GGGAGCTGCC GCGGCATCGA AGCGACCGGA AGCGAAAACG GCGGCCCCAT GACGAGGCCG 3780 CCGTCGCATT CCAGACTGTA GGAGCGGCGC GAGCCGCGAC CGCGACAACG CGGCTATGAC 3840 GCAAGCCCCG CCGCGAGCGG ATACTCCGCG GTCGCGACTT GCGTCGCTCC TACAGGGAGC 3900 TGCCGCAGCA TCGAAGCGAC CGGAAGCGAA AACGGCGGCC CCATGACGAG GCCGCCGTCG 3960 CGTTCCAGAC TGTAGGAGCG GCGCGAGCCG CGACCGCGAC AACGCGGCTA TGACGCAAGT 4020 GCCGCCGCGA GCGGATACTC CGCAGTCGCG ACTTGCGTCG CTCCTACGGG GAGCCGCCGC 4080 AGTCGCGCGG CCACTCGGGG AT 4102 // ID Contig1232 standard; DNA; UNC; 3564 BP. XX DE Contig1232.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..3564 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene 3..374 FT /locus_tag="DeVSDRAFT_0103" FT /colour=11 FT CDS 3..374 FT /locus_tag="DeVSDRAFT_0103" FT /product="beta-lactamase" FT /note="SPTR: A1FX23 Beta-lactamase precursor. Stenotrophomonas maltophilia R551-3." FT /note="KEGG: xom:XOO_1700 beta-lactamase " FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT PSEIRGSSWRRQRIGSAGYALGWRVFDYAGHRVVFHAGAVQGYRGMVAMMPERDLGIAVLWNSESGLPTGLLPTILDRAI FT GMPVQRWLDVDGFDDPGLYASEGVGPARDINGSNAQKSTAAPK* FT " FT gene complement(533..1066) FT /locus_tag="DeVSDRAFT_0104" FT /colour=13 FT CDS complement(533..1066) FT /locus_tag="DeVSDRAFT_0104" FT /product="conserved hypothetical protein" FT /note="SPTR: Q28W84 Hypothetical protein precursor. Jannaschia sp. (strain CCS1)." FT /note="KEGG: jan:Jann_0111 hypothetical protein " FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT VKALLKGLFYLIVLLAVVFAGGGLLLPDKTHVERSAVIQRPPAQVFAMLDSFKRFNEWSPWYALEPDAKYSYSGPESGVG FT AGMAWEGKRVGRGSQRIAESVPQSRIAVALDFDGSQATATYTLAAEGEGTKLTWALDSDHGYNLMARWIGLVMEKMVGKD FT YEQGLARLKQVMENEPR* FT " FT gene complement(1324..2340) FT /locus_tag="DeVSDRAFT_0105" FT /colour=13 FT CDS complement(1324..2340) FT /locus_tag="DeVSDRAFT_0105" FT /product="hypothetical protein" FT /note="SPTR: A1FX26 Hypothetical protein. Stenotrophomonas maltophilia R551-3." FT /note="KEGG: xcv:XCV3194 hypothetical protein " FT /note="COGs: COG3064 Membrane protein involved in colicin uptake category=M" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MEIRSRDARRAHAFADDARSRAGRAGAAGGAKKNSPGLLTVGKSVIRFRPADVSCHESENSQRDNTQHNSNLRPDYQNGG FT RRVRFLCRNVGPALFADDIQSPDDIAGVLLCTRYAFGGPGFCLAARLRGRPRPLGRASHRSGRRHGRMRSPIRSDAPGAP FT AVARGSDSRGSATTESFSTGLTAPPLIIPDQPLTRSHPMAVKKAAKKSAAKKATKKVAKKAGAKKVAKKATKKTAKKAVK FT KVAKKAVRKTAKKAAKKATKKTAKKAVKKTAKKAAKKATKKTAKKVAKKATKKTAKKAAKKTAKKTAKKAAKKAPKKAAK FT RARKPKAAALPATPAPLI* FT " FT misc_feature complement(989..1045) FT /colour=11 FT /locus_tag="DeVSDRAFT_0104" FT /note="1 probable transmembrane helix predicted by FT TMHMM2.0" FT sig_peptide complement(1004..1066) FT /colour=11 FT /locus_tag="DeVSDRAFT_0104" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 0.834) with cleavage site probability 0.304 at FT residue 21" SQ Sequence 3564 BP; 491 A; 1228 C; 1262 G; 583 T; 0 other; CGCCCAGCGA GATCCGCGGC TCCAGCTGGC GCCGCCAGCG CATCGGCTCG GCCGGCTACG 60 CGCTGGGCTG GCGCGTGTTC GACTACGCCG GCCATCGCGT GGTGTTCCAT GCCGGCGCGG 120 TGCAGGGCTA CCGCGGCATG GTCGCGATGA TGCCCGAGCG CGACCTCGGC ATCGCGGTGC 180 TGTGGAACAG CGAGAGCGGT CTGCCCACCG GCCTGCTGCC GACCATCCTC GACCGCGCCA 240 TCGGCATGCC GGTGCAGCGC TGGCTCGACG TCGACGGCTT CGACGACCCG GGCCTGTACG 300 CCTCCGAAGG CGTCGGCCCG GCGCGCGACA TCAACGGCAG CAACGCGCAG AAGTCGACCG 360 CCGCGCCGAA ATAAAAGGCA GCCGAACCAA CGGAAAAGGC CCGCTTCGGC GGGCCTTTTC 420 GTTTGCGGCG TTTGCTTGTG GGAGGGACTT CAGTCCCGAT GCTCTTGGCT CCGATCGCGG 480 CGATCGGAAA GGAAGGCGTC GGGACTGAAG TCCTTCCTAC AAGAACCCGC CCTCAGCGCG 540 GCTCGTTCTC CATCACCTGC TTGAGCCGCG CCAGCCCCTG CTCGTAATCC TTGCCGACCA 600 TCTTCTCCAT CACCAGGCCG ATCCAACGCG CCATCAGGTT GTAGCCGTGG TCGCTGTCCA 660 GCGCCCAGGT CAGCTTGGTG CCCTCGCCTT CGGCGGCGAG GGTGTAGGTC GCGGTGGCCT 720 GGCTGCCGTC GAAGTCCAGC GCGACCGCGA TCCGGCTCTG CGGCACCGAC TCGGCGATGC 780 GCTGGCTGCC GCGGCCGACC CGCTTGCCCT CCCAGGCCAT GCCCGCGCCG ACGCCGGACT 840 CCGGTCCGCT GTAGCTGTAC TTGGCGTCGG GCTCGAGCGC GTACCACGGC GACCATTCGT 900 TGAAGCGCTT GAACGAGTCG AGCATGGCGA ACACCTGCGC CGGCGGCCGC TGGATCACCG 960 CGGAGCGTTC GACATGGGTC TTGTCCGGCA ACAGCAGGCC GCCGCCGGCG AAGACCACGG 1020 CGAGCAGCAC GATCAGATAG AACAGACCCT TGAGCAGAGC TTTCACGGCG CGATCCCCGG 1080 CGGTGGCTAC GCACCGATCC TAGCGCCGTC GCGGCGCGGA CGCGGGAATG CCGGACGGCC 1140 GGCCGACGGG AGGCGCCGCG ACGCGACACC GGTGAGGCTG GGTGAGCGAC GCCGCGAGCG 1200 GCATCGACAG GTCGCAGCGC GCCGGGCGCG GACCGCTGCA GCAAGCCTTC GCCCATAAAA 1260 AAACTCTCCC CCCGCCTGGG CTGCGGGGAG AGAGTCTGAT TACGGCTTAA TCGGGGCGCT 1320 GATTCAGATC AGCGGAGCCG GGGTCGCCGG CAGAGCGGCG GCCTTCGGCT TGCGGGCGCG 1380 CTTGGCGGCC TTCTTCGGGG CCTTCTTGGC GGCCTTCTTG GCGGTCTTCT TAGCAGTCTT 1440 CTTGGCCGCC TTCTTGGCGG TCTTCTTGGT GGCCTTCTTG GCGACCTTCT TAGCAGTCTT 1500 CTTGGTGGCC TTCTTCGCGG CCTTCTTCGC AGTCTTCTTC ACCGCCTTCT TGGCGGTCTT 1560 CTTGGTGGCC TTCTTGGCGG CCTTCTTGGC GGTCTTGCGG ACGGCCTTCT TGGCGACCTT 1620 CTTCACGGCC TTCTTGGCGG TCTTCTTGGT GGCCTTCTTG GCGACCTTCT TAGCGCCGGC 1680 CTTCTTGGCG ACCTTCTTCG TCGCTTTCTT GGCGGCGGAC TTCTTAGCGG CTTTCTTAAC 1740 GGCCATGGGA TGGCTCCTCG TCAGTGGTTG ATCAGGGATG ATCAGTGGTG GTGCGGTAAG 1800 CCCAGTGGAG AATGACTCTG TGGTGGCAGA GCCGCGGGAG TCGGACCCGC GTGCAACCGC 1860 CGGCGCGCCA GGCGCGTCGG AACGGATCGG GGATCGCATC CGGCCGTGGC GGCGACCGGA 1920 TCGATGGCTG GCCCGCCCAA GCGGGCGGGG GCGGCCGCGC AACCGCGCGG CCAAACAAAA 1980 ACCCGGGCCG CCGAACGCGT ACCGGGTGCA TAGCAGGACG CCAGCGATGT CATCGGGACT 2040 TTGGATGTCA TCGGCAAAGA GAGCGGGGCC AACATTTCTG CAGAGGAAGC GAACCCTGCG 2100 TCCACCGTTT TGATAATCCG GGCGGAGGTT CGAGTTGTGC TGCGTGTTGT CGCGCTGGCT 2160 GTTCTCACTC TCGTGGCAGG AAACGTCTGC TGGGCGAAAC CTAATCACGC TTTTTCCTAC 2220 TGTCAACAAC CCCGGCGAAT TTTTCTTCGC CCCGCCGGCC GCGCCGGCGC GACCGGCGCG 2280 CGAGCGCGCG TCGTCGGCGA ACGCATGCGC GCGCCGCGCA TCGCGCGAAC GAATTTCCAT 2340 CGCATCGCTG AAACCCAAGC GTGGCGCGGG TTTCGGCGCG TTCGCGTTTT TCTTTCGCGC 2400 GCACCGATCG ATGCGCGCGC GCGTTCGCCG ACGCGTTCGA CGCGCGCGCG GCGACCTGTA 2460 TCGGAAGAAA AAATTCCGTT CCGCGGACGC CGCCGATTTC GCGCCGCACA AGCCCGAATG 2520 CGCGAAAGTG CGCAAACTTT TTTCCACCGT CGACGACCGT CGGTCGGCCC TTCGCCGACG 2580 CTGGACGCGT TCGACGGCGT CCGCCGCCGA CGCGCGCGCC GATGCCGGCG ATGGCGCAGG 2640 CGGCGAGGTT CGACGTACAT GCGTGGCGCG CGCGACGGAC GCGGCGCGCA CTGCTGCTCG 2700 GGATGCGCGG GTCGATTCGG GCGCGCTCGA ACGCGGCGCG CGCGCGGCGA CGGCGGTCGG 2760 GCGCGGATGT CGCGAAGCTG TCGGAACGCG CGCGGCGCGG CGCCGGGATG CGCGCGCGAA 2820 ACGCTACGCG AAAGTGGCGG ACGCGCGCGG TACACGGCGG CGGCGAAGCG GCGGCGCGGT 2880 GCCGGCCGGC GCGATGCGCG CGAGCGCGGC CGCCATCGAC GCGCGGCGGC GGCAGCGATC 2940 GGCGCGGTCG CGGATGCCGG CGCGGTCGCG ACCCGCGCGC GGCCGCATCG ACGCGGCCGA 3000 CGCCGGCGCC GACGCGCCCG CGCACGACGG CGACGCGGTT TTTTCCCGAG CGAAATCGAC 3060 GCGCATGCGA AAACGTTCGC GCGCTGCGTC CGGCCGACCG ATGCCGGCAT CGGGCCGTGG 3120 CGGGATACCG AAGCCGGCGC GACGCGCCTC GCACTGACGC GGCCGAGCGT TGCGCGAACC 3180 GGGTCGTCGA GCTTCGCGGC GGACCGCTGG CGGCGCCGCC GGCGGTTCGC GACGCAGCGG 3240 CGAGCACGCG CGCGGCGACG TTACGCCGAC GTCAACGGCG CGCGTCCGAA TGCCACCTCG 3300 TATTCGCATT CGCGCGAACG CGCGGCGGCG CGCGAGCCGG CACGGTGCCC GCGCTCACGC 3360 CCGCGCCGAC GCCATCGTCG CGGTGCGGCG CAAGCCGCTC ACGGTGGGAA GGATCGGGGC 3420 GCGGCAGCGC CGTCGTCGGA ATCGCGAGGC GCGCGGCAGG GGGACGCCTC GCCTCGTCTC 3480 GCCTCGCCTC GACTCGACTC GACTCGACTC GACTCGGCGC GCGGCGCGAC ACGGCGACCG 3540 CGCGCCGTAT CGACGGCGGC GCCG 3564 // ID Contig1241 standard; DNA; UNC; 3583 BP. XX DE Contig1241.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..3583 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene 311..1639 FT /locus_tag="DeVSDRAFT_0106" FT /colour=11 FT CDS 311..1639 FT /locus_tag="DeVSDRAFT_0106" FT /product="General substrate transporter" FT /note="PFAM: General substrate transporter; major facilitator superfamily MFS_1" FT /note="SPTR: Q4K798 Dicarboxylate MFS transporter. Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)." FT /note="KEGG: pfl:PFL_4804 dicarboxylate MFS transporter " FT /note="COGs: COG2814 Arabinose efflux permease category=G" FT /note="InterPro IPR005828:IPR005829:IPR007114:IPR011701" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT VSAITSTQAPAAAAGMTPGQRLKSIFSGSVGNLVEYYDWYVYSAFSLYFAHVFFPSGDRISQALNAGAIFAVGFLMRPLG FT GWVFGRYADRHGRRAALMRSVLLMCAGSLIITFTPGYDTIGVFAPILLVAARLMQGLSVGGEYGSSATYLSEMSSRQNRG FT FWSSFLYVTLILGQLLALLVLIVLQQFVLSEEQLKAWGWRIPFAIGAIAAITALYLRRNMQETESFTKLKSSDAPAKREG FT SLKTLMQHPRAVLTVVGLTMGGTLAFYTYTNYMLKFLTISTGFDKETASLINAGTLFVYMLMQPLVGALSDRIGRRPILI FT AFGVLGTVLTVPVMHWIRGAQTPMEAFWLIMILLSAVSGYTAINAVVKAELFPVEIRALGVGLPYALTVALFGGTAEPVA FT LWFKKIGMETGFFWYVSACILCSLLVYALMPDTRKHSAIDRD* FT " FT gene 1697..3031 FT /locus_tag="DeVSDRAFT_0107" FT /colour=3 FT CDS 1697..3031 FT /locus_tag="DeVSDRAFT_0107" FT /product="sodium:dicarboxylate symporter" FT /note="PFAM: sodium:dicarboxylate symporter" FT /note="SPTR: A0KAU6 Sodium:dicarboxylate symporter. Burkholderia cenocepacia (strain HI2424)." FT /note="KEGG: bch:Bcen2424_2873 sodium:dicarboxylate symporter " FT /note="COGs: COG1301 Na+/H+-dicarboxylate symporters category=C" FT /note="InterPro IPR001991" FT /codon_start=1 FT /transl_table=11 FT /colour=3 FT /translation=" FT MKKSGSHFYLWVVGAIVLGGLIGHFFPEFGVKLKPLGDGFIALIKMLIGPIIFLTVVLGIAGVADVKKVGRVGVKAILYF FT EVVSTIALVIGLVVVNTLKPGAGFNADPAKLDPALVAKATDYAHKAEQQSTVDFLLHIIPKTFTDAFTGDGSLLQVLLLA FT VLFGFSLLHMGKTGEKVMDLLEPLSKVFFGIMSMIMKLAPIGAGAAMAFTIGEFGVGALGPLMKLMGSFYLTCALFVLIV FT LGLIARFTGFSILRFIRYIRDELLLVLGTSSSESALVPLMRKLERLGCSKPVVGLVVPSGYSFNLDGTNIYLTMAAIFVA FT QALGVELTLTQEITLLAVAMLTSKGASGVTGAGFITLAATLHVVPAVPVAGLALILGIDRFMSEARALTNIIGNGVATVV FT VARWENELDRDKLNYELLNPPSATDLDADLPSDHHAPLPDKTPA* FT " FT gene complement(176..1618) FT /locus_tag="DeVSDRAFT_0108" FT /colour=13 FT CDS complement(176..1618) FT /locus_tag="DeVSDRAFT_0108" FT /product="conserved hypothetical protein" FT /note="SPTR: Q3JSM8 Hypothetical protein. Burkholderia pseudomallei (strain 1710b)." FT /note="KEGG: bpm:BURPS1710b_2031 hypothetical protein " FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT VLAGVGHQRVDQQRAQNAGADVPEEAGFHADLLEPQRDRLGGAAEQSDGERVGQADAERADLHREQFGLHHRVDRGVAAD FT RAEQDHDQPERFHRRLRAADPVHHRHRQHGAEHAERDQDRAPADAVGQRAHQRLHQHVDEQGAGVDQRRGLLVEAGADGE FT ELQHVVGVGVERQRAAHGQADHGQHRARVLHQRLQRTLAFGRRVAALELGERLGFLHVAAQVQRGDRGDRADRERDAPAP FT GLELFFAEHELLQDDQHQQRQQLAQDQGHVEEARPEAAVLARGHLAEVSGRAAVFAAHAQALHQPRGHQQDRREHADGVV FT AGSEGDDERAGAHQQHRAHQRGAAAVAVGVAAEHPAAERAHQEAHGEDRAGVKRLRDAVAGGEEHVGEVERERAVDVPVV FT VLDQVADRAGEDRFQALARGHTRGRGRRLGGSDRAHIGSCCEDRGWDAPMPARCRAVGAQGRPHTRRRWWAAGRGGPIAP FT * FT " FT misc_feature order(497..565,599..652,665..733,794..862,905..958, FT 1061..1129,1172..1240,1259..1327,1340..1408,1445..1513, FT 1541..1600) FT /colour=11 FT /locus_tag="DeVSDRAFT_0106" FT /note="11 probable transmembrane helices predicted by FT TMHMM2.0" FT misc_feature order(1715..1774,1817..1885,1922..1990,2132..2200, FT 2258..2326,2369..2437,2645..2713,2756..2824) FT /colour=11 FT /locus_tag="DeVSDRAFT_0107" FT /note="8 probable transmembrane helices predicted by FT TMHMM2.0" SQ Sequence 3583 BP; 539 A; 1283 C; 1126 G; 635 T; 0 other; CGCGCAGCAT GGGCAATGCA GATGACGCGC TGATGGCGGC GCCGCCGCGC CCGCGGCCGC 60 CGCGCGGGGA TCTAAGACCA ATTGGCTAAG CGGTGCGCAG CGCGCGCAAT GCCCGGTTTT 120 GCGGCATGAA CCGGCAATTT CGCGGCGCCG CGGCGTGTGC GCCGCGGCCC TAACCCTAAG 180 GTGCTATTGG CCCTCCCCTT CCTGCCGCCC ACCATCGGCG CCGGGTGTGG GGACGCCCTT 240 GCGCGCCGAC CGCGCGACAC CGCGCCGGCA TTGGCGCGTC CCACCCTCGA TCTTCGCAAC 300 AGGAGCCGAT GTGAGCGCGA TCACTTCCAC CCAAGCGCCG GCCGCGGCCG CGGGTATGAC 360 CCCGGGCCAG CGCCTGAAAT CGATCTTCTC CGGCTCGGTC GGCAACCTGG TCGAGTACTA 420 CGACTGGTAC GTCTACAGCG CGTTCTCGCT CTACTTCGCC CACGTGTTCT TCCCCTCCGG 480 CGACCGCATC TCGCAGGCGC TTAACGCCGG CGCGATCTTC GCCGTGGGCT TCCTGATGCG 540 CCCGCTCGGC GGCTGGGTGT TCGGCCGCTA CGCCGACCGC CACGGCCGCC GCGCCGCGCT 600 GATGCGCTCG GTGCTGCTGA TGTGCGCCGG CTCGCTCATC ATCACCTTCA CTCCCGGCTA 660 CGACACCATC GGCGTGTTCG CGCCGATCCT GCTGGTGGCC GCGCGGCTGA TGCAGGGCCT 720 GAGCGTGGGC GGCGAATACG GCAGCTCGGC CACTTACCTC AGCGAGATGT CCTCGCGCCA 780 GAACCGCGGC TTCTGGTCGA GCTTCCTCTA CGTGACCCTG ATCCTGGGCC AGTTGCTGGC 840 GCTGCTGGTG CTGATCGTCC TGCAGCAGTT CGTGCTCAGC GAAGAACAGC TCAAGGCCTG 900 GGGCTGGCGC ATCCCGTTCG CGATCGGCGC GATCGCCGCG ATCACCGCGC TGTACCTGCG 960 CCGCAACATG CAGGAAACCG AGTCGTTCAC CAAGCTCAAG AGCAGCGACG CGCCGGCCAA 1020 ACGCGAGGGT TCGCTGAAGA CGCTGATGCA GCACCCGCGC GCGGTGCTGA CCGTGGTCGG 1080 CCTGACCATG GGCGGCACGC TGGCGTTCTA CACCTACACC AACTACATGC TGAAGTTCCT 1140 CACCATCAGC ACCGGCTTCG ACAAGGAGAC CGCGTCGCTG ATCAACGCCG GCACCTTGTT 1200 CGTCTACATG CTGATGCAGC CGCTGGTGGG CGCGCTGTCC GACCGCATCG GCCGGCGCCC 1260 GATCCTGATC GCGTTCGGCG TGCTCGGCAC CGTGCTGACG GTGCCGGTGA TGCACTGGAT 1320 CCGCGGCGCG CAGACGCCGA TGGAAGCGTT CTGGCTGATC ATGATCCTGC TCAGCGCGGT 1380 CAGCGGCTAC ACCGCGATCA ACGCGGTGGT GAAGGCCGAA TTGTTCCCGG TGGAGATCCG 1440 CGCGCTCGGC GTCGGCTTGC CCTACGCGCT CACCGTCGCT TTGTTCGGCG GCACCGCCGA 1500 GCCGGTCGCG CTGTGGTTCA AGAAGATCGG CATGGAAACC GGCTTCTTCT GGTACGTCAG 1560 CGCCTGCATT TTGTGCTCGC TGCTGGTCTA CGCGCTGATG CCCGACACCC GCAAGCACTC 1620 GGCCATCGAC CGCGACTGAG CGCGCTGCGC TCGCCCCTCA TTCCTTTTCA CTCACTCCTA 1680 GCCTCCGGTG CCTTCCATGA AAAAATCAGG CTCGCATTTC TACCTGTGGG TGGTCGGCGC 1740 CATCGTGCTC GGCGGCCTGA TCGGGCATTT CTTCCCCGAG TTCGGCGTCA AGCTCAAGCC 1800 GCTGGGCGAC GGCTTCATCG CCCTGATCAA GATGCTGATC GGGCCGATCA TCTTCCTGAC 1860 CGTGGTGCTC GGCATCGCCG GCGTCGCCGA CGTCAAGAAG GTCGGGCGCG TGGGCGTTAA 1920 AGCGATTCTC TATTTCGAGG TGGTCTCCAC CATCGCCCTG GTGATCGGCC TGGTGGTGGT 1980 CAACACGCTC AAGCCCGGCG CCGGCTTCAA CGCCGACCCA GCCAAGCTCG ACCCGGCGCT 2040 GGTGGCCAAG GCCACCGACT ACGCGCACAA GGCCGAACAA CAGAGCACCG TCGACTTCCT 2100 GCTGCACATC ATCCCCAAGA CCTTCACCGA CGCCTTCACC GGCGACGGCA GCCTGCTGCA 2160 GGTGCTGCTG CTGGCGGTGC TGTTCGGCTT CTCGCTGCTG CACATGGGCA AGACCGGCGA 2220 GAAGGTCATG GACCTGTTGG AACCGCTGTC GAAGGTGTTC TTCGGGATCA TGAGCATGAT 2280 CATGAAGCTC GCCCCGATCG GCGCCGGCGC GGCGATGGCC TTCACCATCG GCGAGTTCGG 2340 CGTCGGCGCG CTCGGCCCGC TGATGAAGCT GATGGGCAGC TTCTACCTGA CCTGCGCGCT 2400 GTTCGTGCTG ATCGTGCTGG GCCTGATCGC GCGCTTCACC GGCTTCAGCA TCCTGCGCTT 2460 CATCCGCTAC ATCCGCGACG AACTGCTGCT GGTGCTGGGC ACCTCCTCGT CGGAATCGGC 2520 GCTGGTGCCG CTGATGCGCA AGCTCGAGCG GCTGGGCTGC TCCAAGCCGG TGGTCGGGCT 2580 GGTCGTGCCC AGCGGTTATT CGTTCAATCT CGACGGCACC AACATCTACC TGACCATGGC 2640 CGCGATCTTC GTCGCGCAGG CGCTGGGCGT GGAGCTCACG CTGACCCAGG AGATCACCCT 2700 GCTGGCGGTG GCGATGCTGA CCTCCAAGGG CGCGTCCGGC GTCACCGGCG CCGGCTTCAT 2760 CACCCTGGCC GCGACCCTGC ACGTGGTGCC GGCGGTGCCG GTCGCGGGCC TGGCGCTGAT 2820 CCTGGGCATC GACCGCTTCA TGAGCGAGGC GCGCGCGCTG ACCAACATCA TCGGCAACGG 2880 CGTGGCCACG GTGGTGGTGG CGCGCTGGGA AAACGAGCTC GACCGCGACA AGCTCAATTA 2940 CGAGCTGCTC AATCCGCCGA GCGCGACCGA TCTGGACGCC GACCTGCCGT CCGACCACCA 3000 CGCGCCGCTG CCGGACAAGA CCCCGGCCTA AGCCGCAGCG ACCACGCGGC CCGCACGCGG 3060 GCCGCTTCCC GACTTTCCCA TCCGGCCGGA CGCCCTGCGC GTCCGGCGCG GAGCCCTGTT 3120 GCCAGGACGG CGCCGACGAA CCTGGAGCCT CACCCATGCG CACCGCCCGC TTCGCCTTCG 3180 CCGCCTCCCC GCTCGCCCTG GCCCTGTGCG CGCTGTCGCC CGCGGCCGCC GCCGGCAGCT 3240 TCGACGACTG GCCGACCAAG TACAGCTTCG CCGACGGCAC CGAAATCTCC GCCACCGCCA 3300 ACTGGGCCTA CGACGTAGTC GACTTCGACG GCGACGGCTA CGGCACCGCC GCCACCCGGC 3360 TCAAGGACGA CGGCCACTAC CGCCGCCGCG AGTTCGGCAT GAACCTGAAG AAGAAGGACG 3420 TCTACGACTT CACCGCGGTG TTCGACTTCG AATCCAAGCT CTGGCTCGAT GTCGCCCTGC 3480 GCCTGGAAAC CAAGGCGCTG TTCGGCGCCG ACTACGGCAA GCTGCGCGTG GGCTACTTCA 3540 AGACCCCGGT GAGCATGGAG AGCGTCGCCG CCTCGCGCAG CGG 3583 // ID Contig1245 standard; DNA; UNC; 6051 BP. XX DE Contig1245.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..6051 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene complement(343..2196) FT /locus_tag="DeVSDRAFT_0109" FT /colour=7 FT CDS complement(343..2196) FT /locus_tag="DeVSDRAFT_0109" FT /product="Polynucleotide adenylyltransferase region" FT /note="PFAM: Polynucleotide adenylyltransferase region" FT /note="SPTR: Q09E79 Hypothetical protein. Stigmatella aurantiaca DW4/3-1." FT /note="KEGG: azo:azo3140 probable poly(A) polymerase " FT /note="COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase category=J" FT /note="InterPro IPR002646" FT /codon_start=1 FT /transl_table=11 FT /colour=7 FT /translation=" FT VNRIDAALDPVLIADAYARPVYRDDRHDVRVGDVIELLQAAGMRVFIVGGAPRDWLVGQPGNDIDLCVDAAADDALLRLR FT EAYPAIDGVRMHNQRFGVLRWGDEASGGVDINMLRSWKDIRNDDMWTTTFVPRADLVEDAQMRDFSVNAFYYDCRDNALL FT DPLGCGIDDVQAKTLRLITHHRVLDTSYRTSFRILQFLSRGYAATDSVLAHLEQRADRDIQGMGERIHRWIPNHLHLEDA FT QRAQFRRRLYAHAREPASLAVLDSHFQRNPLMDGSTPTAAASFRRVFQAGLTDADGQLLGGTEVLHLVPHRGRLFASLSY FT KLNDYRPDDPNNGAQIAVLDRADGDWRLAHAYERVHWRTTLESVTFTRDGHGRALDAPVSLLLAAPSDSRGHVYVDSFDD FT DAGAWTRTHLGSGDGVASTRSFFIHRDTATGQERVFAGTAPTGIFSGVYDPDVPGRIRWDETAELSGYTRRPMSFTRCNG FT HLYVSIKPDIYRRIDGPTPQWERSTPFLIRWWFPAAASAGSALCPIRTAAAKCCWPRSKATCAAWCASIRTTVSAKPWNW FT TSSISCTSSGERVRPMPWPPTTTSPRWPMRTAARRGCCADWAPPTARNSTRTRPMPG* FT " FT gene complement(2193..2972) FT /locus_tag="DeVSDRAFT_0110" FT /colour=11 FT CDS complement(2193..2972) FT /locus_tag="DeVSDRAFT_0110" FT /product="ABC-2 type transporter" FT /note="PFAM: ABC-2 type transporter" FT /note="SPTR: Q5H5Y7 Permease. Xanthomonas oryzae pv. oryzae." FT /note="KEGG: xom:XOO_0342 permease " FT /note="COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component category=M" FT /note="InterPro IPR000412:IPR013525:IPR013526" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT MSVSSDLIALHCIVRREVSRILRLWLQTLVPPAVSTALYFAIFGKLIGDRIGSVDGGSSYLQFITPGLVMMCIITSSYGN FT ASSSFFFVRFNRAVEEMLVSPMRNWIILLGYVAGAVVRSLMVGAIVVAIALVLSPSLSLAHPLVAVLSALLAATIFSLLG FT FINALYAKTLDDIGHVSHYVLTPLAYLGGVFYPISLLDAPWQAVAQVNPLAHMIGTFRYGVLGTGAPGFGLSIAVMLGLT FT LGLSALALVLLRRGVGTRS* FT " FT gene complement(3017..3898) FT /locus_tag="DeVSDRAFT_0111" FT /colour=13 FT CDS complement(3017..3898) FT /locus_tag="DeVSDRAFT_0111" FT /product="protein of unknown function UPF0157" FT /note="PFAM: protein of unknown function UPF0157" FT /note="SPTR: Q097P9 Hypothetical protein. Stigmatella aurantiaca DW4/3-1." FT /note="KEGG: mmr:Mmar10_1757 protein of unknown function UPF0157 " FT /note="COGs: COG2320 Uncharacterized conserved protein category=S" FT /note="InterPro IPR007344" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MLCYPQEFSSRAQDQDESATRRLTPAYVRRTRHRRPRNFGRRLKYDFDPARRVARDGCARTARRNAMNAAAGDLSGALQV FT ARVLRRLRAQVQPGELGAESVEQFVRRYSRVRAPALDLNLHSGYDPAWPQAFGDEKQRLLAALADEDVAGIEHIGSTAIP FT QLASKDILDIVVAMRDAAAIERVARTLVVLGYQAHGESPIDAGFAWHWWIAADGGRSFVVHTCAADNPRLAEIKNFRDFL FT CAFPQERQRYVELKRELAATPGQTWLEYSALKKILVVRITARANAWRAAGGEV* FT " FT gene complement(4420..4788) FT /locus_tag="DeVSDRAFT_0112" FT /colour=11 FT CDS complement(4420..4788) FT /locus_tag="DeVSDRAFT_0112" FT /product="alpha/beta superfamily hydrolase" FT /note="SPTR: Q39MI5 Alpha/beta superfamily hydrolase. Burkholderia sp. (strain 383) (Burkholderia cepacia (strain ATCC 17760 / NCIB 9086 / R18194))." FT /note="KEGG: bur:Bcep18194_C7287 alpha/beta superfamily hydrolase " FT /note="COGs: COG1073 Hydrolases of the alpha/beta superfamily category=R" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT MPLAPLKKENASNAEPLAAWEYYHTPCAEYPNAPGYAAARSLDQIITHDAYNIAEAFLAQPVQIVAGSVAGSQWMSDNLF FT ARAASADKQFHVDEGANHMLLYFVPKYVNEGAVLALFFQSRL* FT " FT gene complement(5312..5974) FT /locus_tag="DeVSDRAFT_0113" FT /colour=13 FT CDS complement(5312..5974) FT /locus_tag="DeVSDRAFT_0113" FT /product="conserved hypothetical protein" FT /note="SPTR: A1AAT9 Hypothetical protein. Escherichia coli O1:K1 / APEC." FT /note="KEGG: sfv:SFV_1343 hypothetical protein " FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT VATGGQPRWVEDPILGIGGQVARHVIDLMAGQDATWLTLFLRNVRKLHRAACGAVRVVTGDGLDKAVLGEAMQGQDLVYA FT NLAGDGIDRQTKAVVAAMKSADVQRLIFIASLGIYVEPVGEFQQWSKAMIGEELKPFRRAADVVEAPGLDYTLLRPAWLT FT DEDEVGYEATAKGETFNGTEVSRRSVAYLVAKAIVRLTLHVRANLEVGNPGSNGDKPSFY* FT " FT misc_feature complement(order(2220..2285,2385..2450,2472..2537, FT 2583..2648,2709..2774,2844..2909)) FT /colour=11 FT /locus_tag="DeVSDRAFT_0110" FT /note="6 probable transmembrane helices predicted by FT TMHMM2.0" SQ Sequence 6051 BP; 1003 A; 1996 C; 2065 G; 987 T; 0 other; TCCGCACGAT TCGCTGTTGC AGTCACTTTA GGCCGGGGAG GTCTCGCAGA CCGAGAAAGC 60 GCGCGCCGTT GAAACAGAGA GCGATCACGG TCCGCCTACG CAGTCAGCGC TTCCATTCGG 120 CGAGCGCGGC GTCGGCCGAC ACCGAGAACA CCCAGGCGGT CTGCCGGCAT CGCTTGGCGT 180 TGGGGTCGTA GCCGCCGACG TACATCATGT CCGGCGCGAA CGGCGAGGCG GCGAAGGTGC 240 GCGCGGCGAC GAGATCGGCG GTGCCGGGCG CTTGCGGATC GTCGACGCGC CCGAGCGTGT 300 AGCGCGGGCC GTCGGGATCG CGAATGAGAT ACCACGCGTC GGTCACCCAG GCATCGGCCG 360 GGTGCGTGTC GAGTTGCGTG CTGTAGGTGG CGCCCAGTCC GCACAGCAAC CGCGGCGCGC 420 CGCCGTGCGC ATCGGCCACC GGGGTGAAGT CGTCGTAGGC GGCCACGGCA TAGGTCGGAC 480 GCGTTCCCCA CTGCTGGTGC AGGAAATCGA TGACGTCCAG TTCCAGGGTT TCGCGGAAAC 540 CGTCGTTCGG ATCGATGCGC ACCACGCGGC ACAGGTCGCC TTCGAGCGCG GCCAGCAGCA 600 CTTCGCCGCT GCCGTTCGGA TCGGGCACAG TGCTGAGCCC GCGGAAGCCG CTGCTGGGAA 660 CCACCAGCGG ATGAGGAATG GTGTAGACCT TTCCCACTGC GGCGTCGGGC CATCGATGCG 720 CCGGTAGATG TCGGGCTTGA TGCTGACGTA TAGGTGGCCG TTGCATCGGG TAAACGACAT 780 CGGCCGACGC GTGTAGCCCG ACAGCTCGGC GGTTTCGTCC CAGCGGATGC GGCCCGGCAC 840 GTCCGGGTCG TAGACGCCGC TGAAGATGCC GGTGGGCGCT GTGCCGGCGA ATACACGTTC 900 CTGGCCGGTC GCAGTGTCGC GATGGATGAA GAAGCTGCGG GTGCTGGCCA CACCGTCGCC 960 GCTGCCCAAG TGCGTGCGCG TCCAGGCGCC TGCGTCGTCG TCGAAGCTGT CGACATAGAC 1020 ATGCCCGCGG CTGTCGGAGG GCGCGGCGAG CAGCAGCGAC ACCGGCGCAT CGAGCGCGCG 1080 CCCGTGGCCG TCGCGGGTGA AGGTCACCGA CTCCAGCGTC GTGCGCCAAT GCACGCGCTC 1140 GTAAGCGTGG GCGAGCCGCC AGTCGCCGTC GGCGCGGTCG AGCACCGCGA TCTGCGCGCC 1200 GTTGTTCGGA TCGTCCGGCC GGTAGTCGTT CAACTTGTAC GACAGCGACG CGAACAGGCG 1260 CCCGCGATGC GGCACCAGAT GCAACACTTC GGTCCCGCCC AGGAGTTGCC CGTCGGCGTC 1320 CGTCAGGCCG GCTTGAAAGA CGCGGCGGAA CGAGGCGGCC GCGGTCGGAG TCGATCCATC 1380 CATGAGCGGG TTCCGTTGAA AGTGGCTGTC GAGCACCGCG AGCGAGGCCG GCTCGCGCGC 1440 ATGGGCGTAG AGCCGTCGCC GGAACTGCGC CCGCTGCGCG TCTTCGAGAT GCAGGTGATT 1500 GGGGATCCAG CGATGGATGC GCTCGCCCAT GCCCTGGATG TCGCGGTCTG CACGCTGCTC 1560 AAGATGCGCC AGGACGCTAT CAGTGGCGGC GTAACCGCGA CTGAGGAACT GCAGGATGCG 1620 AAAGCTCGTG CGATAGCTGG TATCGAGCAC GCGATGATGG GTGATCAGCC GCAGCGTCTT 1680 GGCCTGCACG TCGTCGATGC CGCAGCCCAG CGGATCGAGC AGCGCATTGT CGCGGCAGTC 1740 GTAATAGAAC GCGTTGACCG AGAAGTCGCG CATCTGCGCG TCCTCGACCA GATCGGCGCG 1800 CGGAACGAAC GTGGTGGTCC ACATGTCGTC GTTGCGGATG TCCTTCCAGC TGCGCAGCAT 1860 ATTGATGTCG ACGCCGCCGC TGGCTTCGTC GCCCCAACGC AGCACGCCGA AGCGCTGGTT 1920 GTGCATGCGC ACGCCGTCGA TGGCCGGATA CGCTTCGCGC AGGCGCAGCA GCGCGTCGTC 1980 GGCCGCCGCG TCCACGCACA GGTCGATGTC GTTGCCCGGT TGCCCGACCA GCCAGTCGCG 2040 CGGCGCGCCG CCGACGATGA ACACGCGCAT GCCGGCGGCC TGCAGCAGCT CGATCACGTC 2100 GCCGACGCGC ACGTCGTGGC GGTCGTCGCG ATACACCGGC CGCGCGTAGG CGTCGGCGAT 2160 CAGGACAGGA TCGAGCGCGG CATCGATGCG GTTCACGAGC GCGTCCCCAC GCCGCGACGG 2220 AGCAGGACCA GGGCGAGCGC GGACAGGCCC AGCGTCAGGC CGAGCATCAC CGCGATGGAC 2280 AGGCCGAAGC CCGGCGCGCC GGTGCCGAGC ACGCCGTAGC GGAAGGTACC GATCATGTGC 2340 GCCAGCGGAT TGACCTGGGC GACCGCCTGC CATGGCGCGT CCAGCAGGCT GATCGGGTAG 2400 AACACGCCGC CGAGGTAGGC CAGCGGCGTG AGCACGTAGT GCGAGACGTG GCCGATGTCG 2460 TCGAGCGTCT TCGCGTACAG CGCGTTGATG AAGCCCAGCA GCGAGAAGAT CGTCGCGGCC 2520 AGCAACGCCG ACAGCACGGC GACCAGCGGG TGCGCCAGGG ACAGCGACGG CGACAGCACC 2580 AGCGCGATGG CCACCACGAT CGCGCCCACC ATCAGGCTGC GCACCACCGC GCCGGCGACG 2640 TAGCCGAGCA GGATGATCCA GTTGCGCATC GGCGACACCA GCATCTCCTC CACCGCGCGG 2700 TTGAAGCGGA CGAAGAAGAA CGAACTGGAG GCGTTGCCGT AGCTGCTGGT GATGATGCAC 2760 ATCATCACCA GCCCGGGGGT GATGAACTGC AGATAGCTCG AGCCGCCGTC GACGCTGCCG 2820 ATGCGGTCGC CGATCAGTTT TCCGAAGATC GCGAAGTACA GCGCGGTGGA CACCGCCGGC 2880 GGCACCAGCG TCTGCAGCCA CAGGCGCAGG ATGCGCGAGA CCTCGCGGCG CACGATGCAA 2940 TGCAGCGCGA TCAGATCGGA GGAGACGCTC ATGCCTGCCG GCCCCGGGCC GGAACGCGAT 3000 GCTGCGGCAT GCGGGTTCAG ACCTCGCCGC CGGCCGCGCG CCAGGCGTTG GCCCGTGCGG 3060 TGATGCGCAC CACCAGGATC TTCTTCAGCG CGCTGTATTC CAGCCAGGTC TGGCCCGGCG 3120 TGGCCGCCAG TTCGCGCTTG AGCTCGACGT AACGTTGCCG CTCCTGCGGG AACGCGCACA 3180 GGAAGTCGCG GAAGTTCTTG ATCTCGGCCA GGCGCGGGTT GTCGGCGGCG CAGGTGTGGA 3240 CCACGAACGA GCGGCCACCG TCCGCGGCGA TCCACCAATG CCACGCGAAG CCCGCGTCGA 3300 TCGGGCTTTC GCCATGGGCC TGATAACCCA GTACGACCAA CGTGCGCGCC ACGCGCTCGA 3360 TCGCCGCCGC ATCGCGCATC GCCACCACGA TGTCCAGGAT GTCCTTGCTG GCCAGTTGCG 3420 GGATCGCGGT GCTACCGATG TGTTCGATGC CGGCCACGTC TTCGTCGGCG AGCGCCGCCA 3480 GCAGGCGCTG TTTCTCGTCC CCGAACGCTT GCGGCCAGGC CGGGTCGTAG CCGCTGTGCA 3540 GGTTCAGATC GAGCGCCGGC GCGCGCACGC GCGAGTAGCG GCGCACGAAT TGCTCGACGC 3600 TTTCCGCGCC CAGCTCGCCG GGCTGCACCT GCGCCCGCAG CCGCCGGAGG ACGCGCGCCA 3660 CCTGCAGCGC CCCGCTGAGA TCTCCCGCCG CAGCATTCAT CGCGTTGCGT CTCGCAGTCC 3720 GCGCGCAGCC GTCTCGCGCC ACGCGGCGCG CGGGATCGAA GTCGTATTTG AGACGGCGCC 3780 CGAAGTTTCG CGGTCGGCGA TGCCGAGTGC GGCGGACGTA GGCGGGCGTG AGACGGCGGG 3840 TAGCGGATTC ATCCTGATCC TGAGCGCGAC TGCTGAACTC CTGGGGGTAA CATAGCATGC 3900 GGTCCGCGGA TCCCCGACAG TGAGATCCGG CGACGCGGCC GACTGCCGCC CGGGTCGAAA 3960 ACCCCGCCCC GGGGCGCCGC CGCACCGGCG TTGCGTCTAC CAGCGACGCA CTGCGTTTCG 4020 CTTCAAGAAC GAATCGGCAA CGGCGGGCCC GCGATCATCG CAGAATCCGC CGCGACTCTC 4080 ACGATGCCGC AAAACCGGCC TTCTATATAT GTGAGCGACA ACACCTTATG CCGCGCGGAA 4140 ATCTATAAAT CATTGGCCGC ACAGGACGCA CCGTGCGATC ACCAGCAGTA CCCTTTGAGC 4200 GCCCGCATCG CGGCTTATCG ACCTGCCCGC AACAAGTGCG GGTTGCACAT AAGGGGCTAG 4260 CGCCCGCCCC ATAAACACAA CGGTCCTGGC GTCTTCGGAC ATCAGCTCGC TAGCAGCTAG 4320 AACCCTAAAG GCGCTGTTTC CTCAAGAAAC TAGTGACTTA TGGAGCCCTA TGATGCCGAC 4380 CATCCACTTC TGCACCACCG GGAGAGTTGG CGCCGCTTCT CAGAGCCTGG ACTGGAAGAA 4440 CAGCGCCAGC ACCGCCCCCT CGTTGACGTA CTTCGGGACG AAGTACAACA ACATGTGGTT 4500 GGCGCCTTCA TCCACGTGGA ACTGCTTGTC GGCGCTGGCC GCACGCGCGA ACAGATTGTC 4560 GCTCATCCAT TGGCTGCCAG CCACGCTGCC GGCGACGATC TGCACCGGCT GGGCCAGGAA 4620 GGCTTCGGCT ATGTTGTACG CGTCGTGGGT GATGATCTGG TCCAGGCTGC GCGCGGCGGC 4680 GTAGCCGGGC GCGTTCGGAT ACTCCGCGCA CGGCGTGTGG TAGTACTCCC ACGCAGCCAG 4740 CGGTTCGGCA TTGGACGCAT TCTCTTTCTT GAGCGGCGCC AACGGCATGG TGGCGAAACC 4800 CCGACCGGCC GCATCGGCGG CGCGCGCATC CGACCCGGCC TGGATGGCAT CGCGTTGGCG 4860 TCCTTGACGT TGTTCTCCCA GCCGCTGTGG ACATCTGCCC GATGTTGACC GCGCTGACCG 4920 CGGCGATGGC TTTCAGGCGC CGATCGTTGA TGGCCGCATT GGCGGTGTAA TCGGCGCCTG 4980 CGCAGATGCC CATCGCGCCG ATGCGGCCCG CGCTCACGTC CTCGGGACTG ACGTAGGGGC 5040 TCTCCCATTG GCGCGGTTCG TCGGTGCTCT CGCCCTGGTA CGAGCGGTCG AAGGCGATGA 5100 AGCCGGGCTC GGCCAGCTTG CGCGCGTACG TGCCCGCGGC CTGCTCCTTA ACCCCGTCAC 5160 CGGGGTGCGA AACGATGACG GCGGCGTAAT GCCTGGACGC GTCGAAGCCC TCGGGATAGT 5220 TGATCACCGC CGACAGCGCA ATGCCATGGC CGTTGCGGTT CTGGATGCCG ATCCTTTCGG 5280 ATGTCATTGG GGAATCTTCT GACGGGGGAT TTCAGTAGAA CGATGGCTTG TCGCCGTTGC 5340 TGCCGGGATT GCCTACTTCC AGGTTGGCGC GTACGTGGAG GGTGAGCCGG ACGATGGCCT 5400 TGGCGACCAG ATAGGCGACG CTGCGACGCG AGACCTCGGT GCCGTTGAAG GTTTCGCCTT 5460 TTGCGGTGGC CTCGTAGCCG ACCTCGTCCT CGTCGGTCAG CCAGGCAGGA CGCAGGAGCG 5520 TGTAGTCCAA GCCCGGAGCC TCGACAACGT CCGCCGCACG GCGGAATGGC TTGAGCTCCT 5580 CGCCGATCAT CGCCTTGCTC CACTGCTGGA ATTCGCCTAC AGGCTCGACG TAGATGCCGA 5640 GCGAAGCGAT GAAAATAAGG CGCTGGACGT CGGCGGACTT CATCGCCGCA ACGACGGCCT 5700 TCGTCTGCCG GTCAATGCCA TCGCCGGCGA GGTTGGCGTA GACGAGATCC TGTCCCTGCA 5760 TCGCTTCGCC CAGGACGGCC TTGTCCAGCC CATCGCCGGT CACTACCCGC ACGGCGCCGC 5820 AGGCGGCGCG GTGCAGCTTG CGGACGTTGC GCAGGAACAG CGTCAACCAG GTCGCGTCCT 5880 GGCCGGCCAT CAGGTCGATC ACATGCCGGG CGACCTGTCC GCCGATGCCG AGGATCGGGT 5940 CTTCCACCCA GCGCGGCTGG CCGCCTGTGG CCACTGGAGC TGTCCTCCAC GCCGGACACG 6000 ACAGTGCTCG ATCTGGCGGT GCGCGCGCCG GAGGAATGAC TTCAGGCGTC C 6051 // ID Contig1246 standard; DNA; UNC; 4767 BP. XX DE Contig1246.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..4767 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene 81..1316 FT /locus_tag="DeVSDRAFT_0114" FT /colour=9 FT CDS 81..1316 FT /locus_tag="DeVSDRAFT_0114" FT /product="restriction endonuclease S subunits-like protein" FT /note="SPTR: Q0AUQ6 Restriction endonuclease S subunits-like protein. Syntrophomonas wolfei subsp. wolfei (strain Goettingen)." FT /note="KEGG: swo:Swol_2257 restriction endonuclease S subunits-like protein " FT /note="COGs: COG0732 Restriction endonuclease S subunits category=V" FT /codon_start=1 FT /transl_table=11 FT /colour=9 FT /translation=" FT MNTPTQVRLHDCVRLVKGKPPAQQRYYGADSAWYLTPEYLRGAAACERAKPSANAVHIRDGDTVLLWDGSNAGEVLLGRS FT GVLASTMTRVSSDSRFTPSYFFFALKQWESYLKSQTSGSGIPHVDKEVLGKLEITEFAESEQSKIAEVLSTVDRAIAQTK FT ELIAKQQRIKIGLMRDLLTLGIDEAGQLRSEATHAFEDSPLGRIPMEWDLARLGDVADVNRGKFTHRPRDDARFYGGSHP FT FIQTGDVAANVGRTVDDFSQTLSIMGTRVSNEFPKGTIAITIAANIADTAILGRPMYFPDSVAGAIAKAPNSIRFIEMTV FT RRHKPALEQLAPKSAQSNINLETLRPLVIALPKPAEQERIATAYEAADERQISNEQSLRKLRHLKTALMQDLLTGKVRVT FT PLLQQAKEAIA* FT " FT gene 1313..3406 FT /locus_tag="DeVSDRAFT_0115" FT /colour=13 FT CDS 1313..3406 FT /locus_tag="DeVSDRAFT_0115" FT /product="protein of unknown function DUF262" FT /note="PFAM: protein of unknown function DUF262; protein of unknown function DUF1524 RloF" FT /note="SPTR: A1ICB0 Hypothetical protein. Candidatus Desulfococcus oleovorans Hxd3." FT /note="KEGG: mac:MA2417 hypothetical protein " FT /note="COGs: COG1479 Uncharacterized conserved protein category=S" FT /note="InterPro IPR004919:IPR011089" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MKAQDLQFTQLLQGAKQFIIPIFQRTYSWEIGHCEQLWNDILRAGSHAELDSHFIGSAVYIPEQETSAAISRWLVIDGQQ FT RITTLTLLLLALKRRLEKDARDTPVSAAEIEDYFLLNRYGKGEQRYKMLLTKTDKDTLIALLDGKPVPDKASHRIKENFE FT FFAGKIAEADLEVVYAGIGKLMIVDVRLQQGIDNPQMIFESMNSTGKALTQADLIRNYVLMGLPHEQQTRLYEDYWRPME FT LLFGVEHYNKHFDEFMRFFLVIHTGNHRIRKDDVYNEFKIYSRGHDDEPLLAALLEFARHYCCMALGSEKDSELAIAFQD FT IRELRADVCYPMLMEIYHDYTQGRLGKDAFVSTLQLVESYVFRRAICDVPTNSLRQTFATFCRKLDKSRYLESVKAAFML FT LPSYRRFPGDDEFRRRLQIRNLYKFNRRSYWLRRFENFGRKERVMVQDYTIEHIMPQNANLSAAWQQSLGSEWARVQEQY FT LHTLGNLTLTGYNSEYSDRPFADKRDMEGGFAQSPLKLNEGLGSCSDWNEDQIKLRAGRLSSRAVDIWKAPALANDVLDT FT YREKKAESAAEYTISDHPNLSGGPVRTLFEHFRTQVIALDECVQEEFLKLYVAYKAETNFVDVIPQAKRLRLTLNMAFND FT IDDPRKLCVDVTDLGHWGNGCVEVSLGSEADLPYVMGLVRQSLERQLGEENTEAESA* FT " FT gene 3403..4767 FT /locus_tag="DeVSDRAFT_0116" FT /colour=9 FT CDS 3403..4767 FT /locus_tag="DeVSDRAFT_0116" FT /product="protein of unknown function DUF450" FT /note="PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450" FT /note="SPTR: Q0AUQ7 Type I restriction-modification system, R subunit. Syntrophomonas wolfei subsp. wolfei (strain Goettingen)." FT /note="KEGG: swo:Swol_2256 type I restriction-modification system, R subunit " FT /note="COGs: COG0610 Type I site-specific restriction-modification system R (restriction) subunit and related helicases category=V" FT /note="InterPro IPR006935:IPR007409:IPR014021" FT /codon_start=1 FT /transl_table=11 FT /colour=9 FT /translation=" FT MSNKSTPVHIKLDERNHVEKPFLDQLMGLGWNILDLEKDQKPGDTGRASFTEVVLEPRLRTQLKVINPWLAEDQIDEAVK FT RLTASFPSNDLMKNNQHLLHLLLEGTSVAENRETGENSPSVRFIDFNDPGNNDFTAVCQFKLRVPGTEHHILPDIVLFLN FT GLPVGLVECKSPKVNDALASAIDQMLRYSEQRGAKGEGHAQLFWYNQIVIATCRQQAKFGTISTHAEKYFYRWADPYPRT FT VEDLDHGAGAPNDQQRLVAGMLDRQNLLDLIRTFTLFSTNDSGQAIKIVGRYQQFRAVKLAVKRLLEGNTPRQRSGIIWH FT TQGSGKSLTMMFMVRELYRHSRLAHWKVVFVTDRTQLETQLTETSQAIGFTVKVADSIRKLKEMLASTSSDLVMAMIHKF FT RDADLEASFPELNTSPHILVLTDEAHRSQYRLLGANLDRAIPHAARIGYTGTPID FT " SQ Sequence 4767 BP; 1097 A; 1439 C; 1368 G; 863 T; 0 other; TCGAGCCGAC TTCTGGAAGC CGCGCGCGGG GAAACGCTGA AGGTATTGGA TGGGATGTTG 60 GCGGGATTGG GGTACGTCAA ATGAATACGC CTACCCAAGT GAGGCTTCAT GATTGCGTGA 120 GGCTTGTGAA AGGCAAGCCG CCCGCGCAGC AGCGGTACTA TGGCGCCGAC TCCGCATGGT 180 ATCTGACGCC CGAATATCTG CGCGGCGCAG CTGCTTGCGA AAGAGCGAAG CCAAGTGCGA 240 ACGCCGTTCA CATTCGCGAT GGCGACACAG TTCTCCTTTG GGACGGATCG AACGCTGGCG 300 AGGTACTCCT GGGGCGCAGC GGCGTGCTTG CGTCCACGAT GACGCGTGTT TCATCCGACA 360 GTCGATTTAC CCCTTCCTAC TTCTTCTTTG CGCTGAAGCA ATGGGAGTCG TACCTCAAAA 420 GTCAAACGTC TGGCTCCGGG ATTCCGCACG TTGACAAGGA AGTGCTTGGC AAGCTGGAGA 480 TCACGGAGTT CGCAGAGTCC GAACAATCCA AAATCGCAGA AGTGCTGTCC ACAGTAGACC 540 GAGCAATTGC CCAGACCAAG GAGCTGATCG CCAAGCAGCA GCGCATCAAG ATCGGCCTGA 600 TGCGGGACCT GCTCACCCTC GGCATCGACG AGGCCGGCCA GCTGCGCTCT GAAGCCACGC 660 ACGCCTTCGA GGACTCACCT CTCGGCCGCA TCCCGATGGA GTGGGACCTG GCGAGGCTTG 720 GCGACGTCGC GGACGTGAAT CGTGGCAAGT TCACGCACCG ACCACGCGAT GATGCGCGGT 780 TCTATGGCGG TTCGCACCCA TTCATTCAAA CGGGCGATGT AGCAGCGAAC GTCGGCAGGA 840 CTGTTGATGA TTTCAGCCAA ACACTAAGCA TTATGGGAAC CCGAGTCAGC AATGAATTTC 900 CGAAGGGCAC GATTGCAATA ACTATCGCTG CGAATATCGC TGATACGGCG ATACTTGGTC 960 GGCCAATGTA CTTTCCAGAC AGTGTAGCGG GGGCTATTGC AAAGGCGCCC AATAGTATCC 1020 GCTTCATCGA AATGACAGTT CGCCGTCACA AACCTGCACT TGAACAACTC GCGCCGAAGA 1080 GCGCCCAGAG CAATATCAAT CTGGAAACAC TGAGGCCGCT TGTTATTGCG CTACCCAAGC 1140 CCGCTGAGCA AGAACGTATT GCCACCGCGT ATGAAGCAGC CGATGAGCGG CAGATATCGA 1200 ATGAGCAGTC CCTGCGAAAG CTGCGCCACC TCAAAACCGC CCTGATGCAA GACCTACTCA 1260 CCGGCAAGGT CCGCGTCACA CCTTTGCTGC AACAGGCCAA GGAAGCCATC GCATGAAAGC 1320 CCAGGATCTC CAGTTCACCC AACTACTGCA GGGCGCCAAG CAGTTCATCA TCCCAATCTT 1380 CCAGCGCACC TACAGCTGGG AAATCGGCCA TTGCGAGCAG CTCTGGAACG ACATCCTCCG 1440 CGCCGGCAGC CATGCAGAAC TGGACAGCCA TTTCATCGGT TCGGCGGTGT ACATCCCCGA 1500 ACAGGAGACC AGCGCCGCCA TCTCCCGCTG GCTGGTCATC GACGGCCAGC AACGCATCAC 1560 CACCCTGACC TTGCTGTTGC TGGCCCTGAA GCGGCGGCTG GAGAAAGATG CACGGGATAC 1620 GCCGGTGTCG GCGGCGGAGA TCGAAGACTA CTTCCTGTTG AACCGCTACG GCAAAGGCGA 1680 GCAGCGCTAC AAGATGCTGC TGACCAAGAC CGACAAGGAC ACCTTGATCG CCCTGCTGGA 1740 CGGCAAGCCA GTGCCGGACA AGGCCTCCCA CCGCATCAAG GAGAACTTCG AGTTCTTCGC 1800 CGGAAAGATC GCCGAGGCCG ATCTGGAGGT GGTCTATGCC GGCATCGGAA AACTGATGAT 1860 CGTGGACGTG CGTCTGCAAC AGGGCATCGA CAACCCGCAG ATGATCTTCG AGAGCATGAA 1920 CTCCACCGGC AAGGCGCTGA CCCAGGCCGA TCTGATCCGC AACTACGTGC TGATGGGCTT 1980 GCCGCACGAA CAACAGACGC GCCTGTATGA AGACTACTGG CGCCCGATGG AACTACTGTT 2040 TGGCGTAGAG CACTACAACA AGCACTTCGA CGAGTTCATG CGGTTTTTTC TGGTTATCCA 2100 CACCGGCAAC CACCGCATCC GCAAGGATGA CGTGTACAAC GAGTTCAAGA TCTACTCGCG 2160 CGGCCACGAC GATGAGCCCC TGCTGGCAGC GCTGCTGGAG TTTGCGCGCC ACTACTGCTG 2220 CATGGCATTG GGCAGCGAGA AGGACTCGGA GCTCGCAATC GCCTTTCAGG ACATTCGCGA 2280 ACTGCGTGCG GACGTCTGTT ACCCCATGCT GATGGAGATA TACCACGACT ACACGCAGGG 2340 GCGGCTTGGC AAAGACGCGT TTGTCAGCAC GCTGCAACTG GTAGAAAGCT ATGTGTTCCG 2400 CCGCGCGATC TGCGATGTGC CCACCAATTC CCTTCGCCAG ACCTTTGCCA CCTTCTGCCG 2460 CAAGCTCGAC AAGAGCCGTT ATCTGGAAAG CGTCAAGGCC GCCTTCATGC TCCTGCCTTC 2520 GTATCGGCGG TTTCCGGGCG ATGACGAGTT CCGCCGCCGG CTGCAGATCC GCAACTTGTA 2580 CAAATTCAAC CGCCGCAGCT ATTGGCTGCG CCGCTTCGAG AACTTCGGGC GCAAGGAACG 2640 CGTGATGGTG CAGGACTATA CGATCGAACA CATCATGCCG CAGAACGCCA ACCTGAGCGC 2700 CGCCTGGCAG CAATCCCTTG GTAGCGAGTG GGCGCGGGTG CAGGAACAAT ATCTGCACAC 2760 CTTGGGCAAC CTCACGTTGA CCGGCTACAA CTCGGAATAC AGCGATCGCC CGTTTGCCGA 2820 TAAGCGTGAC ATGGAGGGCG GCTTTGCGCA GAGCCCGCTC AAGCTCAATG AGGGGCTGGG 2880 CAGCTGCTCG GACTGGAACG AGGATCAGAT CAAGCTGCGA GCAGGGCGCC TTTCCAGCCG 2940 CGCGGTGGAT ATCTGGAAAG CCCCTGCGCT TGCCAATGAT GTACTGGACA CGTATCGCGA 3000 GAAAAAGGCA GAAAGCGCAG CGGAATACAC GATTTCCGAT CATCCGAATC TTTCCGGTGG 3060 CCCGGTTCGC ACGCTGTTCG AACACTTCCG CACCCAAGTC ATTGCGCTGG ACGAATGTGT 3120 GCAAGAGGAG TTCCTGAAAC TCTATGTGGC GTACAAAGCA GAGACGAATT TTGTCGATGT 3180 CATCCCCCAA GCCAAGCGGC TTCGCTTGAC CCTCAACATG GCCTTCAACG ATATCGACGA 3240 CCCGCGCAAG CTATGTGTGG ATGTGACTGA TTTGGGCCAC TGGGGCAATG GCTGCGTAGA 3300 AGTGAGTTTG GGGAGCGAAG CCGATCTGCC GTATGTGATG GGCCTGGTTC GGCAGTCACT 3360 GGAACGGCAA CTTGGCGAAG AAAACACCGA GGCTGAAAGC GCATGAGCAA TAAGTCCACG 3420 CCCGTTCACA TCAAGCTCGA CGAACGCAAC CACGTCGAGA AGCCCTTTCT TGATCAGCTG 3480 ATGGGCCTGG GCTGGAACAT CCTTGATCTA GAAAAAGATC AAAAACCCGG CGACACCGGC 3540 CGCGCCAGCT TCACCGAAGT GGTGCTGGAG CCGCGCTTGC GTACGCAGCT GAAGGTGATC 3600 AACCCGTGGC TGGCGGAAGA CCAGATCGAC GAGGCGGTGA AACGGCTAAC CGCCAGTTTC 3660 CCCAGCAATG ACCTGATGAA AAACAACCAG CACCTGCTGC ACCTGCTGCT GGAAGGCACC 3720 AGCGTGGCCG AGAACCGGGA GACCGGCGAG AACAGCCCGT CAGTGCGCTT TATCGACTTC 3780 AACGATCCGG GCAACAACGA CTTCACCGCT GTGTGCCAGT TCAAACTGCG CGTGCCGGGC 3840 ACCGAGCACC ACATCCTGCC GGACATCGTG CTGTTCCTGA ACGGCCTTCC AGTGGGGCTG 3900 GTGGAGTGCA AGTCGCCCAA GGTCAACGAT GCACTTGCCA GCGCCATCGA CCAGATGCTG 3960 CGCTACAGTG AGCAGCGCGG CGCCAAAGGG GAAGGCCACG CCCAGCTGTT CTGGTACAAC 4020 CAGATCGTCA TTGCCACCTG CCGCCAGCAG GCCAAGTTCG GCACCATCTC CACCCACGCT 4080 GAAAAGTACT TCTACCGCTG GGCCGACCCC TACCCGCGCA CGGTGGAAGA CTTGGACCAT 4140 GGCGCTGGCG CCCCCAACGA CCAGCAACGG CTGGTGGCGG GCATGCTGGA CCGGCAGAAC 4200 CTGCTGGACC TGATCCGTAC CTTCACGTTG TTCTCGACGA ATGACAGCGG CCAGGCCATC 4260 AAGATCGTCG GCCGCTACCA GCAGTTCCGA GCGGTGAAGC TGGCGGTCAA GCGCCTACTG 4320 GAAGGCAACA CCCCGCGCCA GCGCAGCGGC ATCATCTGGC ATACCCAGGG CTCGGGCAAA 4380 TCGCTGACCA TGATGTTCAT GGTGCGCGAA CTGTACCGGC ACTCGCGGTT AGCGCACTGG 4440 AAGGTGGTGT TCGTCACAGA CCGCACCCAA CTGGAAACCC AGCTCACCGA AACCAGTCAG 4500 GCCATCGGTT TCACAGTGAA GGTGGCCGAC AGCATCAGGA AGCTGAAGGA AATGCTGGCA 4560 TCCACGTCAT CGGATCTGGT GATGGCAATG ATCCACAAGT TTCGCGATGC GGATCTGGAA 4620 GCCAGCTTCC CGGAGCTCAA TACCAGCCCG CACATTCTGG TACTGACCGA CGAGGCACAC 4680 CGCTCGCAGT ACCGGTTGCT GGGCGCAAAC CTGGACCGCG CCATCCCCCA TGCCGCACGC 4740 ATCGGCTACA CCGGTACGCC CATCGAC 4767 // ID Contig1247 standard; DNA; UNC; 4449 BP. XX DE Contig1247.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..4449 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene 1..1587 FT /locus_tag="DeVSDRAFT_0117" FT /colour=9 FT CDS 1..1587 FT /locus_tag="DeVSDRAFT_0117" FT /product="type I restriction-modification system, R subunit" FT /note="SPTR: Q0AUQ7 Type I restriction-modification system, R subunit. Syntrophomonas wolfei subsp. wolfei (strain Goettingen)." FT /note="KEGG: swo:Swol_2256 type I restriction-modification system, R subunit " FT /note="COGs: COG0610 Type I site-specific restriction-modification system R (restriction) subunit and related helicases category=V" FT /codon_start=1 FT /transl_table=11 FT /colour=9 FT /translation=" FT GSRQAYLEAEPTIAAKAADMVTHYLTHVYPNGYKAQVVATSREAAVRYKQHIDAALEAAVAELEANNPNGLDVATLKAIE FT TDVIISTGHNDLPHLKAYGDSRRHETSINRFKLGFSATDAGVDGKLGIIIVNNMLLTGFDAPVEQVMYLDKVVVAHNLLQ FT TISRVNRVGGATKDKGFIVDYVGVGHHLKKALHNYDEREQKQITNCLSFPERELRELQAAHAEIMALLKKHGLTDLTDHD FT ACFDVFYDEDVRFSFMLAFKKFARALNTLFPAKEALAYIHDFQSLNEVNILAGKHFRDARLSMQGIPPKLRAIADAHLAS FT NGIDIKIAPISILDEDFEKDVREHKRNKTKAAEVEHAIRHHLDVELDDDPDLQASFAEAMAAIFAEFKDNWQKIYEELEK FT LRQRIKDAGKEPTYGLHRKKQMPFFRLFQTELGGVMNQHPDYAGKPDERIAVLVDLTQQVYNAVERELKLTGFWESIPAR FT NKLKAEVQLVLLAPQFANVSGLVRKRDAIISRVMELAEAKNDTILYAA* FT " FT gene 1592..2275 FT /locus_tag="DeVSDRAFT_0118" FT /colour=11 FT CDS 1592..2275 FT /locus_tag="DeVSDRAFT_0118" FT /product="protein of unknown function DUF45" FT /note="PFAM: protein of unknown function DUF45" FT /note="SPTR: Q0AUQ8 Zinc metalloprotease. Syntrophomonas wolfei subsp. wolfei (strain Goettingen)." FT /note="KEGG: swo:Swol_2255 zinc metalloprotease " FT /note="COGs: COG1451 metal-dependent hydrolase category=R" FT /note="InterPro IPR002725:IPR006025" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT MVLKYEIRRSAKRKNVTITVERDRAVVVHAPMGLPEEKLRQLVDGKRQWLFEKLNDAQKYQPLPHAPGKELVNGESALYL FT GRAYRIELVDAADAGVRFAGKFLIPRSRASERKQVLRQWYMERAQERILPRVNLHARNLGVSYAQVKISDSRLRWGSCTP FT GNNLNFNWRLIKAPIFVIDYVIVHELAHLMEPNHTARFWNIVRAQLPSMERARDWLRVQGQSLEDDI* FT " FT gene complement(2729..3508) FT /locus_tag="DeVSDRAFT_0119" FT /colour=13 FT CDS complement(2729..3508) FT /locus_tag="DeVSDRAFT_0119" FT /product="conserved hypothetical protein" FT /note="SPTR: Q9HT77 Hypothetical protein. Pseudomonas aeruginosa." FT /note="KEGG: pau:PA14_72520 hypothetical protein " FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MAVKIEKKIKGYSVVTPEDKAKDAAAKAAAASAPAAPAELPVDNVIQMHERIERPEILIGSTYKIKSPLFEHALYVTIND FT IVLNAGTEHELRRPFEIFINSKNMDHFQWIVALTRIMSAVFRKGGDVTFLVDEMKAVFDPRGGYFKAGGVYMPSLVAELG FT AIVEDHLKSIGMIHDPEMSDAQRELIAEKRRAYEERSKKNPDAGASITVVAPRSEDVTVTGDGASFPPSATMCHKCNTKA FT VVIMDGCATCLNCGYSKCG* FT " FT gene complement(3622..4128) FT /locus_tag="DeVSDRAFT_0120" FT /colour=13 FT CDS complement(3622..4128) FT /locus_tag="DeVSDRAFT_0120" FT /product="conserved hypothetical protein" FT /note="SPTR: A1FXG5 Hypothetical protein. Stenotrophomonas maltophilia R551-3." FT /note="KEGG: ldb:Ldb2081 hypothetical protein " FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MSNGNGVTATLTQAAENVKETASNLGSAIATRAEEAVASVKQTAKRARKAAKKAVGDAKKKLAKASATAKKEASSLKAKA FT TGKKAAAKKTAKKAAKKVAKKVATKKAAAKKAVKKAVKAVKKAAAKKAPAKKAAAKKAPAKKAAKKAVKKAAAKKAPAKK FT AAKKAAKR* FT " SQ Sequence 4449 BP; 824 A; 1368 C; 1372 G; 885 T; 0 other; GGCTCGCGCC AGGCGTATCT GGAAGCCGAG CCCACCATCG CGGCGAAAGC TGCCGACATG 60 GTGACGCACT ACCTGACCCA CGTGTACCCC AACGGCTACA AGGCGCAGGT GGTAGCCACT 120 TCGCGCGAGG CGGCAGTGCG CTACAAGCAG CACATCGACG CGGCATTGGA AGCAGCCGTG 180 GCGGAGCTCG AGGCCAACAA CCCGAATGGA CTGGACGTCG CTACGCTAAA AGCCATCGAA 240 ACCGACGTGA TCATCTCCAC CGGTCACAAC GACCTGCCGC ACCTCAAGGC CTACGGCGAC 300 AGCCGCCGTC ACGAAACCAG CATCAATCGC TTCAAGCTGG GCTTTAGCGC GACGGATGCA 360 GGCGTGGACG GCAAACTGGG CATCATCATC GTCAATAACA TGCTCCTGAC CGGCTTCGAT 420 GCCCCGGTAG AACAAGTGAT GTACCTGGAC AAGGTGGTGG TGGCGCACAA CTTGTTGCAG 480 ACCATTTCGC GTGTGAATCG CGTGGGCGGT GCAACCAAGG ACAAGGGTTT CATCGTCGAT 540 TACGTTGGCG TGGGCCACCA CCTGAAAAAG GCGCTGCACA ACTACGACGA GCGCGAGCAG 600 AAGCAGATCA CCAACTGCTT GAGCTTCCCC GAACGGGAGC TGCGCGAGTT GCAGGCCGCA 660 CACGCGGAGA TCATGGCGCT ACTGAAAAAA CACGGCCTTA CCGACTTAAC CGACCACGAT 720 GCGTGCTTCG ACGTGTTCTA CGATGAGGAC GTCCGCTTTT CCTTCATGCT GGCGTTCAAG 780 AAGTTCGCAC GTGCGCTGAA CACGCTGTTC CCTGCCAAGG AAGCGCTGGC TTACATACAC 840 GACTTTCAAT CGCTCAACGA GGTCAACATT CTGGCCGGCA AGCATTTCCG TGATGCGCGC 900 TTGAGCATGC AAGGCATACC GCCCAAGCTG CGTGCGATTG CCGATGCGCA TCTTGCTTCC 960 AACGGCATCG ATATCAAGAT CGCACCCATC TCCATTCTGG ACGAGGATTT CGAGAAGGAC 1020 GTCAGGGAAC ACAAGCGCAA CAAGACCAAA GCCGCCGAGG TGGAGCACGC CATCCGCCAT 1080 CATCTGGACG TTGAGCTGGA CGATGATCCG GATTTGCAGG CTTCGTTCGC CGAGGCAATG 1140 GCTGCGATTT TTGCCGAGTT CAAGGACAAC TGGCAGAAGA TCTATGAGGA GCTGGAGAAG 1200 CTTCGCCAAC GCATCAAGGA TGCCGGCAAG GAGCCCACCT ACGGACTGCA CCGCAAGAAG 1260 CAAATGCCGT TCTTCCGCCT GTTCCAAACT GAACTGGGCG GTGTAATGAA CCAACACCCC 1320 GACTACGCCG GCAAACCGGA CGAGCGCATC GCCGTACTGG TGGACCTGAC CCAGCAGGTT 1380 TACAACGCGG TGGAGCGCGA ACTGAAGCTG ACCGGGTTCT GGGAGAGCAT TCCGGCACGC 1440 AACAAGCTCA AAGCCGAGGT GCAACTGGTT CTACTGGCGC CGCAGTTTGC AAATGTGTCT 1500 GGCCTGGTGA GGAAACGAGA TGCCATCATC AGTCGAGTGA TGGAGCTGGC TGAAGCCAAG 1560 AACGACACCA TTTTGTACGC GGCGTAATGC CATGGTCCTT AAGTACGAAA TCCGTCGCTC 1620 GGCCAAGCGA AAGAATGTCA CCATTACTGT AGAGCGCGAC CGCGCCGTGG TCGTACACGC 1680 CCCGATGGGC TTGCCCGAAG AGAAGCTTCG GCAGCTGGTG GATGGCAAGC GCCAATGGCT 1740 GTTCGAGAAA CTCAACGATG CGCAGAAGTA CCAACCCCTG CCGCACGCGC CCGGCAAGGA 1800 ACTGGTGAAC GGCGAATCCG CCCTATACCT GGGCCGCGCC TACCGCATCG AGTTGGTGGA 1860 CGCCGCGGAT GCCGGCGTGC GCTTTGCCGG CAAATTCCTT ATCCCACGCT CACGCGCAAG 1920 CGAGCGCAAG CAGGTGCTGC GGCAGTGGTA CATGGAACGC GCACAGGAAC GAATCCTGCC 1980 CCGCGTGAAC CTGCACGCCA GGAACCTTGG TGTCAGCTAC GCACAAGTCA AGATCAGCGA 2040 CAGCCGTCTC CGCTGGGGCT CATGCACGCC GGGCAACAAT CTCAACTTCA ACTGGCGGCT 2100 GATCAAGGCC CCGATTTTCG TAATCGACTA CGTAATCGTG CACGAGCTGG CGCATTTGAT 2160 GGAGCCCAAC CACACGGCCC GCTTCTGGAA CATCGTGCGC GCGCAACTGC CCAGCATGGA 2220 GCGTGCTCGT GACTGGCTGC GTGTGCAGGG GCAGAGCCTT GAGGACGATA TTTAGAGCAG 2280 GGCGTTCCGG CCAAGCAACG CCACGCGCCC GCTCGACATC ATCAACCTGC TTGATCTGGG 2340 TGAGCATGCA GTTGGACACC CTTGAGAAGA TCTGCAAGAG GCTGAAGGTC CCGTTGTGGG 2400 AGGTGTTGAA GGATGCGGAG TGCGCGCCTT ACAGGCGCCA TGAACCCTCA GCGGCGTACA 2460 TCGCGCGCGC CCCGAAGATC AGAGGGCCTA CCCAAGCCCG CTACACGTTG CTCGCAAAAC 2520 CCTGCCTTCA GGGCAAGAAA AAAGGGCTCC GAAGAGCCCT TTTTTGTTGC TTTGCTTCCA 2580 GATTTGAACG CCGCTTACCG CTCAGCGTGC GACGCCCCTC TTAGCAGCAG CTTTTAGGTT 2640 AACCAGGTAG CGACTTAAGG AGGCCCAAGT TGCAGCTTAT AGGCATCCCC ACACTTTTCG 2700 CTGTTCCCGA GTTATCGCGC GAGCTACCTC ACCCGCACTT CGAATACCCA CAGTTCAAGC 2760 ACGTCGCGCA GCCGTCCATG ATCACCACCG CCTTGGTATT GCACTTGTGG CACATGGTCG 2820 CGCTGGGCGG GAAGCTGGCG CCGTCGCCGG TGACGGTGAC GTCTTCGCTG CGCGGGGCGA 2880 CTACGGTGAT CGAGGCGCCG GCGTCAGGGT TTTTTTTTGA GCGTTCTTCG TAGGCGCGGC 2940 GCTTCTCGGC GATGAGTTCG CGCTGGGCGT CGCTCATTTC CGGGTCGTGG ATCATGCCGA 3000 TCGACTTGAG GTGGTCTTCG ACGATCGCGC CGAGTTCGGC CACCAGCGAG GGCATGTAGA 3060 CGCCGCCGGC CTTGAAGTAG CCGCCGCGCG GGTCGAACAC GGCCTTCATC TCGTCGACCA 3120 GGAAGGTCAC GTCGCCGCCC TTGCGGAACA CCGCCGACAT GATGCGCGTG AGCGCCACGA 3180 TCCACTGGAA GTGGTCCATG TTCTTGGAGT TGATGAAGAT CTCGAACGGA CGGCGCAATT 3240 CGTGTTCGGT GCCGGCGTTG AGCACGATGT CGTTGATGGT CACGTACAGC GCGTGCTCGA 3300 AAAGCGGCGA TTTGATCTTG TAGGTCGAGC CGATCAGGAT CTCGGGGCGC TCGATGCGTT 3360 CGTGCATCTG GATCACGTTG TCGACCGGCA GCTCGGCCGG CGCGGCGGGC GCGCTCGCGG 3420 CGGCAGCCTT GGCGGCGGCG TCCTTCGCCT TGTCTTCCGG CGTGACCACG CTGTAGCCCT 3480 TGATTTTCTT CTCGATCTTG ACGGCCATGG GCCCGACTCC TGCGTTGCTG CGCTACTGGT 3540 GCTGTGGGGG AACGTCGTTG CCGGGCGGGA TCGCCGCCCT GCCCTCTCCC GTCGCGGGAC 3600 GGGAGAGGGA CTTCGCGGAA CTCAGCGCTT GGCGGCCTTC TTGGCGGCCT TCTTCGCCGG 3660 CGCCTTCTTG GCCGCAGCCT TCTTCACCGC TTTCTTGGCG GCTTTCTTGG CCGGCGCTTT 3720 CTTGGCGGCG GCTTTCTTCG CCGGCGCCTT CTTCGCCGCG GCCTTCTTGA CCGCCTTGAC 3780 CGCCTTCTTC ACCGCCTTCT TGGCGGCGGC CTTCTTGGTC GCGACTTTCT TGGCGACCTT 3840 CTTGGCCGCC TTCTTCGCGG TCTTCTTGGC GGCGGCCTTC TTGCCGGTGG CCTTGGCCTT 3900 CAGCGAGGAG GCTTCCTTCT TGGCCGTGGC GCTGGCCTTG GCGAGCTTCT TCTTGGCGTC 3960 GCCGACCGCC TTCTTGGCGG CCTTGCGGGC GCGCTTGGCG GTCTGCTTGA CCGAGGCCAC 4020 GGCCTCTTCG GCGCGCGTGG CGATGGCGCT GCCGAGGTTG GACGCGGTTT CCTTCACGTT 4080 CTCGGCCGCC TGGGTCAGGG TCGCCGTCAC TCCATTACCG TTGCTCATTG TGCCCTCCTG 4140 GTGGGCGGTA TCGTCTTAGG CGTACGCATG GTTACGTGCA GCAATCGGGG TGTTGCCGGA 4200 GTGATGCTAT ACCTGTGGCG CGCCGTAAAA ACAGAGGGCG CGCGCCGCTG CGACCAACGG 4260 CGCAGAGCCG GCGCGGCGCA GTGGATCGCA AATCGGCGAG TTCGCTGCGC CGCCTGAACG 4320 GGAACGCCCG CCTTCGCGCC GCCCGGCCCG GGGCCGGCGG CGCGCGGCGG GCGCGCCGTC 4380 AGAACTTGCC GTAGTAGCCT TCTTTCAGCG CGTCGAACAG GTTGGCGGGG GTGTGCATCT 4440 CGCCGTCGT 4449 // ID Contig1249 standard; DNA; UNC; 7046 BP. XX DE Contig1249.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..7046 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene 835..2376 FT /locus_tag="DeVSDRAFT_0121" FT /colour=0 FT CDS 835..2376 FT /locus_tag="DeVSDRAFT_0121" FT /product="Tetratricopeptide TPR_4" FT /note="PFAM: Tetratricopeptide TPR_4" FT /note="SPTR: A1G2B0 Hypothetical protein precursor. Stenotrophomonas maltophilia R551-3." FT /note="InterPro IPR000437:IPR011717" FT /codon_start=1 FT /transl_table=11 FT /colour=0 FT /translation=" FT MRHRSRIAAYGLNLALAFAAAGACAQTPAARSDAAPTRNDIDRRSFYQRLADAHALARDGQSQQAGNAFAELMAQPPFAV FT LPDDERRAALAAAGESAIARDDLPLAAELYRLAAQADGTADEWYRLALIEFDRERPDAAAQAMIQLVERWPETLPRLNET FT VLFQLQYRLKSASDTRLALLRALFDANWVSRTSDLSPIWLNLAEMLVERGRHDDARVVARRIQGPLQLVALRSDKRFDFM FT VRSDSPTFDVDNAARRQVESLREKSELAPRSLDARSQLSYALLIAGRDADVLALNDEVKRRIADAPADQAPYDDLDERVW FT VMNNAAIALRRSGRIDEALAELERASRLSEQGGANVSQTLNLATTYCSLERPDDALAALARSGENTSGYARLIVHAVRLC FT AATAKGDHKTEQKALDYLREHRSEGQQVYLEALLRTQRLDDAARLVAELMASSTDRLETLSGLQDYRRADVLPGDVALRK FT ARADLLAREDVQAAIASVGRIEPYAIYGSGEMD* FT " FT gene complement(2554..3033) FT /locus_tag="DeVSDRAFT_0122" FT /colour=13 FT CDS complement(2554..3033) FT /locus_tag="DeVSDRAFT_0122" FT /product="3-demethylubiquinone-9 3-methyltransferase" FT /note="PFAM: 3-demethylubiquinone-9 3-methyltransferase" FT /note="SPTR: Q46S97 3-demethylubiquinone-9 3-methyltransferase. Ralstonia eutropha (strain JMP134) (Alcaligenes eutrophus)." FT /note="KEGG: reu:Reut_B4637 3-demethylubiquinone-9 3-methyltransferase " FT /note="COGs: COG3865 Uncharacterized protein conserved in bacteria category=S" FT /note="InterPro IPR009725" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MIAKNTICLWYDGTALEAAEFYAKTFPDSAVTAVHRAPGDYPDGQQGDVLTVQFTVAGIPCMGLNGGPAFKHDEAFSFQI FT ATDDQAETDRLWDAIVGNGGKESACGWCKDKWGLSWQITPRALTEAFQDPDRAAAKRAFEAMMQMGKIDIAKIEAARRG* FT " FT gene complement(3215..3889) FT /locus_tag="DeVSDRAFT_0123" FT /colour=13 FT CDS complement(3215..3889) FT /locus_tag="DeVSDRAFT_0123" FT /product="hypothetical protein" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MASIRIPAQGRYPVVRSVSAGCAAALLCVAVVWPLAAGAQAAPWRTLSNENGIHLEARRIPGERFDELRVSTSVKVSPDA FT VADFLLGKYLDAKNKSIRRSFLQRSPEVAVWSDVLSAPVAADRCYSMRFERQALAGGAIRVKFASLDGAEAKPASDCIAL FT RSRGEWLMTPTAAGTRLVYASLTDIGGNTPAFVVKGTLSSAAVSSVRKVVAGSAGLALPRGLED* FT " FT gene 4261..5202 FT /locus_tag="DeVSDRAFT_0124" FT /colour=11 FT CDS 4261..5202 FT /locus_tag="DeVSDRAFT_0124" FT /product="restriction endonuclease" FT /note="SPTR: Q11XS6 Restriction endonuclease. Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)." FT /note="KEGG: chu:CHU_0501 restriction endonuclease " FT /note="COGs: COG3440 restriction endonuclease category=V" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT VTTLPFEVGALYNRSKQIHDVFGGQRQGGISTPKNAPYVIAFTGEAGHSHGYTDDWDEEEEDVFHYFGEGQSGDMRYIGG FT NRAIENHVADGKRLLLFQMMGRGKPCRYRGEFVKLDSYIKPNVAATRGPARNAIVFRLRPIKEGTFVTGKASANPQTADQ FT PLGDTVIKRIIETRKSQKLFRRRLLGVEKQCRLTGIQDLRFLRASHIKTWAACVTGSERTDGNNGLLLAPQVDHLFDRGW FT ITFEDKGTLIVTAHLPADVKKRLGVDLRHGKSCGAFNQQQALYLEHHRAHVFEHKFKIDTDPVEELLDCLLAP* FT " FT gene 6144..7046 FT /locus_tag="DeVSDRAFT_0125" FT /colour=13 FT CDS 6144..7046 FT /locus_tag="DeVSDRAFT_0125" FT /product="hypothetical protein" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT VSTRDTDALERSDQFQQMPEHIKRWILLSPHASQNFAEFFDKGGKIETEVGATLPRYRPSDPPAIVVDQENWRNLQQPGA FT FPWSQRHMFAMLAHEIGHDRDNTTRPFKPDGTAQEYVQYRSEIEATAIFNAFPILRDLKNEPEFKKESPFDAIGYLNGLE FT LARLYQQWNSGELEDKQVVAAIAGKVADTRYTLGGSLTDQDGNGVLTHRDAYLHDFERVLRPRTDAQPPGQAGDNEPAQP FT QRSNHGGATENTFLRNTREKTLEAFAQHGLSPSDQALDCIAGSLCAQARRDGLERIDHVLL FT " FT misc_feature 853..921 FT /colour=11 FT /locus_tag="DeVSDRAFT_0121" FT /note="1 probable transmembrane helix predicted by FT TMHMM2.0" FT misc_feature complement(3785..3850) FT /colour=11 FT /locus_tag="DeVSDRAFT_0123" FT /note="1 probable transmembrane helix predicted by FT TMHMM2.0" FT sig_peptide 835..939 FT /colour=11 FT /locus_tag="DeVSDRAFT_0121" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 1.000) with cleavage site probability 0.537 at FT residue 35" FT sig_peptide complement(3770..3889) FT /colour=11 FT /locus_tag="DeVSDRAFT_0123" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 1.000) with cleavage site probability 0.728 at FT residue 40" SQ Sequence 7046 BP; 1388 A; 2408 C; 2132 G; 1118 T; 0 other; AACTGCAGCG AATGCCGCGC CACGCTCAGC GAGGCCAGGA TGCCGCGCGC GCCCTGCGAC 60 TTGTCGCCCA ACTGCGCCAG CGCCTGCGCT TCCAGCGCCG CCAGCGCCCG GTCGATTTCT 120 TCCGGCGACT GCGCCTGCGG CGACAGCGCA GCTTCGATGC GCTTGACGAA GGCGTACTCG 180 GCCGCGGTGA ACTGGCTGCG GTACGGCTCG ATGCGCTGGC TGTAGCTCAG GCTCGCGCTG 240 GTCGGCATGT ACGGCTGGAA GGTCTTGATG AAATCCTCCA CCGAACCCTG CGGCCGGTAG 300 CCGCAACGGC TGACCAGCAG TTGCAGCGAC GGCGGTTGCG ACTCGTCGGC CATCAGGCAG 360 CCCAGGTAGG CGTTGTGCTC GATGCCGACG TTGTCGAGCG GATTGCCGGC CGCCGCGGCC 420 GAGGAGCTGA AGCCGGCGGC GGCGAGCGCG AGAACCAGGG TGGCCGACAG GCCGAGGCGA 480 TGCTTGGCGA TCATGACGGG ATCCTTTGCG AAGTCGTTCG GATTGAGGGA AAGCCGCATC 540 CGCGTCCTGC GGAACCGGTG CGGTGAGCGC ACAGTGGCCA CCGCGGCGGC GGCAAAGCGA 600 GGAAGGATCG GGGAGGTTTT GGGGAAGCAC GCGGAACGCG GCGGGCGTTA TCGGGAACGC 660 TTCGCGCAAG CTGTGAACGG CGGCCGCGGC GACGACGACG CGCGTCAATA TTCATTTTTG 720 GCGACAGACT CAGCGCATCT GGCTATCCTC GCCGCTCATG GCCGCCCCGA CGCTCGCGCG 780 CCGGCCGCGG CCACGGACCG GCGCCGCCGC GCCGGCATGA ACCGGGAGAC TTGCATGCGC 840 CACCGGTCGC GTATCGCCGC CTATGGCCTG AACCTGGCGC TCGCTTTCGC CGCCGCCGGC 900 GCCTGCGCGC AGACGCCGGC CGCCCGCAGC GACGCCGCGC CCACGCGCAA CGACATCGAT 960 CGCCGGTCTT TCTATCAACG CCTCGCCGAC GCGCACGCGC TCGCCCGCGA CGGCCAGTCG 1020 CAACAGGCCG GCAACGCCTT CGCCGAATTG ATGGCGCAGC CGCCGTTCGC GGTGCTGCCC 1080 GACGACGAGC GCCGCGCCGC CCTGGCCGCG GCCGGCGAAA GCGCCATCGC CCGCGACGAC 1140 CTGCCGCTCG CCGCCGAGCT GTATCGCCTG GCCGCGCAAG CCGACGGCAC GGCGGACGAG 1200 TGGTACCGGC TGGCGTTGAT CGAATTCGAC CGCGAGCGCC CGGACGCCGC CGCGCAAGCC 1260 ATGATCCAGC TCGTCGAGCG CTGGCCGGAA ACCCTGCCCC GGCTCAACGA AACCGTGCTG 1320 TTCCAGCTGC AGTACCGGCT CAAATCCGCG TCCGACACGC GCCTGGCCCT GCTGCGCGCG 1380 CTGTTCGACG CCAACTGGGT CAGCCGCACC AGCGACCTCA GCCCGATCTG GCTCAACCTC 1440 GCCGAGATGC TGGTCGAACG CGGCCGCCAC GACGACGCGC GCGTGGTGGC GCGGCGCATC 1500 CAGGGCCCGC TGCAACTGGT GGCGCTACGC AGCGACAAGC GCTTCGACTT CATGGTGCGC 1560 AGCGACAGCC CGACCTTCGA CGTCGACAAC GCCGCGCGCC GTCAGGTCGA GAGCTTGCGC 1620 GAGAAATCCG AGCTGGCGCC GCGCAGCCTC GACGCGCGCA GCCAGCTCAG CTACGCATTG 1680 CTGATCGCCG GCCGCGACGC CGACGTGCTG GCGCTCAACG ATGAGGTGAA GCGCCGCATC 1740 GCCGACGCGC CGGCCGACCA GGCGCCGTAC GACGACCTCG ACGAACGAGT CTGGGTGATG 1800 AACAACGCCG CCATCGCCCT GCGCCGCAGC GGCCGCATCG ACGAGGCCCT GGCCGAACTC 1860 GAACGCGCCA GCCGCCTGAG CGAACAAGGC GGCGCCAACG TCAGCCAGAC CCTCAACCTC 1920 GCCACTACGT ACTGCAGCCT CGAACGTCCC GACGACGCGC TCGCCGCGCT CGCCCGCAGC 1980 GGCGAGAACA CCAGCGGCTA CGCGCGGCTG ATCGTCCACG CCGTGCGCCT GTGCGCCGCC 2040 ACCGCCAAGG GCGACCACAA GACCGAGCAA AAAGCGCTGG ACTACCTGCG CGAACACCGC 2100 AGCGAAGGCC AGCAGGTCTA CCTGGAAGCC CTGCTGCGTA CGCAGCGTCT GGACGACGCC 2160 GCCCGGCTCG TGGCCGAACT GATGGCATCC AGCACCGATC GCCTGGAAAC GCTGAGCGGG 2220 CTGCAGGACT ACCGGCGCGC CGACGTGCTG CCCGGCGATG TCGCCTTGCG CAAGGCGCGC 2280 GCCGACCTGC TCGCGCGCGA GGATGTGCAG GCGGCCATCG CGTCGGTCGG GCGGATCGAG 2340 CCGTATGCGA TTTACGGCTC GGGCGAGATG GACTGAGGCG CCGCGTCCCA TCGCCGCGCG 2400 GCGCAGCCCG CGGCACGGTG CGTTCGTGCG TCAGGGCATC GCAACAGCGG TCGCCCCGTC 2460 ACAGGTGTCG ACCGCTCCCG GCAAAGCTCG CTGAGCCGGC CGCGCGGAAG AAACATCGCT 2520 CCGCCGCGCA CCCGATCCGC AACGCGCGAC GCCTCAACCG CGCCGCGCCG CCTCGATCTT 2580 GGCGATATCG ATCTTGCCCA TCTGCATCAT CGCCTCGAAC GCGCGCTTGG CCGCGGCGCG 2640 GTCCGGATCC TGGAACGCCT CGGTCAGCGC GCGCGGCGTG ATCTGCCACG ACAGGCCCCA 2700 CTTGTCCTTG CACCAACCGC AAGCGCTTTC CTTGCCGCCG TTGCCGACGA TGGCGTCCCA 2760 CAAGCGATCG GTCTCGGCCT GGTCGTCGGT AGCGATCTGG AACGAAAACG CCTCGTCGTG 2820 CTTGAACGCC GGCCCGCCGT TCAAACCCAT GCACGGAATG CCCGCCACCG TGAACTGCAC 2880 CGTCAACACA TCGCCCTGCT GGCCGTCGGG ATAATCGCCG GGCGCGCGAT GCACCGCCGT 2940 CACCGCACTG TCCGGAAACG TCTTCGCATA GAACTCGGCC GCTTCCAGCG CGGTGCCGTC 3000 GTACCACAGA CAAATCGTGT TCTTCGCGAT CATCGCCGCT CTCCTGCCGT AAGGATGGAA 3060 CCTGCGTAGG TACCGCATGC ACCGACGGCG GCGCTAGTGC CGAAGCAACC GAAATCGCCA 3120 TGACACCGCC ACGCGCGCAC GGCAAGCGAC GAATCACATT GATGAATGCG GCCCCGCATC 3180 ACACCCCGCA CGGCCGCCGA GCGGACGCCC CTGCTCAGTC TTCCAGACCC CGCGGCAACG 3240 CCAGACCCGC CGAACCGGCC ACCACCTTGC GCACGCTGGA GACCGCCGCG GACGACAACG 3300 TCCCCTTGAC CACGAACGCC GGCGTGTTGC CGCCGATATC GGTCAGCGAG GCATACACCA 3360 ACCGCGTCCC CGCCGCCGTC GGCGTCATCA ACCACTCCCC GCGCGAACGC AGCGCGATGC 3420 AATCTGAAGC CGGCTTCGCC TCCGCCCCGT CCAACGACGC GAACTTCACC CGGATCGCCC 3480 CACCGGCCAA GGCCTGGCGC TCGAAGCGCA TCGAATAACA ACGATCCGCC GCCACCGGCG 3540 CGCTGAGCAC GTCCGACCAC ACCGCGACCT CCGGCGAGCG CTGCAGGAAA CTGCGGCGGA 3600 TGCTCTTGTT CTTCGCGTCG AGATACTTGC CGAGCAGAAA ATCCGCGACC GCATCGGGCG 3660 AGACCTTCAC CGACGTGCTG ACGCGCAGCT CATCGAAGCG CTCGCCGGGG ATGCGGCGGG 3720 CTTCCAGATG GATGCCGTTT TCGTTGCTGA GGGTGCGCCA GGGGGCGGCC TGCGCGCCGG 3780 CTGCCAGCGG CCAGACGACC GCCACGCACA GCAGCGCCGC CGCGCAACCG GCCGAGACGC 3840 TGCGGACAAC GGGGTAGCGG CCCTGGGCTG GAATACGGAT CGACGCCATG GCTCGTCTCC 3900 TGGCATGTGG GCCGTTATCT GGATTCGATG CGATGGGTGT GACAGGGGCA AGACAGGGGC 3960 CGTGCTGGCT GCCCTGGCAT GGGCGGCATA AATCCGGCGA CATCGGCGCA GCGAGTTCAA 4020 GCGAACAATC GGTAGGGAGT CGCTACCGAT GAAGCCGGGA GTGCTTCGAT CCCGGGTGAG 4080 GTTCAGGCGA CCTGGGATGC AGGTCTATTG ATTTCCGGTT CGGCGGCTCG GGGCGAAATC 4140 GATCCCAAAC CTGGCGGCGC ATGGGCCGCC AGCGTTTTAT TAGCACGTTA AGCGTGCCAA 4200 TTTGGCGTAA TCTTTACGGA GGACGACCCT CGACCACACG GATTTCCCAG CGAGCCCCTG 4260 GTGACCACTC TTCCTTTCGA AGTTGGCGCG CTCTACAACC GCAGCAAACA GATCCACGAC 4320 GTATTCGGTG GCCAACGACA GGGCGGCATC TCCACGCCTA AGAACGCCCC TTACGTCATC 4380 GCTTTTACTG GCGAGGCCGG CCACTCCCAC GGCTACACCG ACGATTGGGA TGAAGAAGAG 4440 GAAGACGTCT TCCACTATTT TGGCGAAGGC CAGAGTGGTG ACATGAGATA TATCGGCGGC 4500 AATCGCGCCA TCGAGAACCA CGTGGCCGAC GGCAAGCGCT TGCTGCTGTT TCAGATGATG 4560 GGCCGCGGAA AGCCGTGCCG ATATCGAGGC GAGTTCGTCA AACTCGACTC CTATATAAAG 4620 CCTAATGTTG CAGCCACGCG AGGACCTGCA CGAAACGCCA TCGTCTTCCG ACTACGCCCT 4680 ATCAAAGAGG GAACATTCGT CACCGGCAAA GCGTCCGCAA ACCCACAGAC GGCCGATCAG 4740 CCCTTAGGCG ATACCGTAAT AAAGAGAATC ATAGAGACTC GTAAGTCACA GAAGCTATTC 4800 CGTCGACGGC TGCTCGGGGT AGAGAAGCAA TGCCGCCTAA CCGGCATCCA AGACCTTCGC 4860 TTCCTACGCG CCAGCCATAT CAAAACTTGG GCTGCTTGCG TCACGGGATC CGAGCGCACC 4920 GATGGGAACA ATGGCCTTTT GCTGGCGCCG CAAGTGGACC ACCTATTTGA CCGGGGGTGG 4980 ATCACCTTCG AAGACAAGGG CACGCTGATC GTCACCGCCC ACCTGCCTGC GGATGTAAAG 5040 AAACGGCTTG GCGTCGATCT TCGTCACGGA AAAAGCTGCG GCGCGTTTAA TCAACAGCAA 5100 GCGCTCTATC TTGAACACCA TCGCGCTCAC GTGTTCGAGC ATAAGTTCAA GATCGATACC 5160 GATCCGGTGG AAGAGCTGCT TGACTGCTTG TTGGCACCCT AGAACGCCAG CACTCGTATA 5220 GTCGACCACG ACGCTCAGAC GACAGCCACC GGAATGCGTG AGTCCTCCGT CGACCTTGGT 5280 GTTGTGGCCT ATGCGACTTG ACTGATTCGA ATGCCTGCCC GCGCGGCGCA GCTCCTCAGA 5340 AATCTTTTTC AGCCCGCCCG CGCCACGTGC CAAAGGCAGT CGAAGAATAC GCTGCAAAGC 5400 CACCAATTCT GCGCGCGAAT CCCTTGGGCA CTCGTGGCGG GCGCAGCCCA CCTTTGCAGA 5460 ACACGCATTG CGCACCAAGA TCAGCGCTAT GATCGGCGCG AGTATCGGTA AACGTTGCGT 5520 TAGACCTATC GCGTTCACTC GCCCTCCGCC TGGCCCAATC AGTAAATGCA TAGCACGCGG 5580 CTATCTTCTT ACACAGGACC TGTCCTCATG GCCGCACGTA GCGATAGCGA ACGAGCCTGG 5640 CAGACAGCGA TGAAGCCCTC GGTTCGCAGC CAAAGCGCAA CTCTAAGTTT CGCTGCCACT 5700 GCGGCACTCA CTCTATTGTC TGGCTGCGCC TCGAACGTTA GATCAACAGC CAACGATCCG 5760 CTAACCATTG AGCGCGTTCT TACTGAACCC CTGAGCGGAG TCGCTGGAAT GGGCCGCGTA 5820 AGCGCAGAGC TATCAAAGAT CTACGGCATC AACCCGTCTG GCGCCAAGTA CATCAATCGC 5880 GATGCCAAGA CACTCGCAGA CGGTCAGGTT CTTTCCTTGT TCTGGCTCGA ACCGCCTCCC 5940 GCTGATTTCA TTTCGCTAGG CCTCGCAGCG GAACCATGCT TCTCTACACA GCGAGCGCTG 6000 AACTTGACTC AGGCCACGCC CTATGAGGGC TCGGGCAAGG TATCCGCTCC TATTTACAAC 6060 GCCTTTAAGA ACGGAATGCT GGTCGGCATC ACGTCCACCC CCGATGGCAA GTGCCTCCAA 6120 ACGATCCACA TCGAGAGGGA CAAGTGAGCA CGCGCGACAC AGACGCTCTT GAGCGCAGTG 6180 ACCAGTTTCA GCAGATGCCA GAACACATCA AGCGATGGAT ACTGCTGTCA CCTCACGCAA 6240 GCCAGAACTT TGCGGAATTT TTTGACAAGG GCGGTAAGAT CGAGACCGAA GTCGGCGCCA 6300 CCCTACCGCG CTATCGGCCG AGCGACCCAC CCGCGATCGT CGTCGACCAA GAGAACTGGC 6360 GGAATCTACA GCAGCCCGGC GCATTTCCTT GGTCGCAACG CCATATGTTC GCCATGTTGG 6420 CCCATGAGAT CGGGCACGAC CGCGATAACA CCACGCGCCC CTTCAAACCC GATGGAACCG 6480 CACAAGAGTA TGTGCAGTAC CGCAGCGAGA TCGAAGCCAC AGCCATATTC AACGCGTTCC 6540 CTATTCTCAG GGACTTGAAG AATGAGCCGG AGTTCAAGAA GGAGTCACCC TTCGATGCCA 6600 TCGGTTATCT GAATGGCCTA GAGCTAGCCA GGCTCTATCA GCAATGGAAC TCCGGAGAGT 6660 TAGAGGACAA GCAGGTGGTC GCGGCGATCG CTGGCAAAGT CGCGGACACG CGATACACGC 6720 TTGGCGGCTC CCTGACCGAT CAAGACGGCA ATGGCGTTCT GACCCACCGC GACGCCTACC 6780 TGCACGACTT CGAGCGCGTG CTGCGCCCTA GGACCGATGC CCAGCCACCT GGACAAGCAG 6840 GTGACAACGA GCCGGCGCAG CCGCAACGCA GTAATCACGG CGGCGCAACC GAAAATACGT 6900 TCTTGCGGAA TACACGCGAG AAGACGCTGG AAGCGTTCGC CCAGCATGGG CTGAGCCCTA 6960 GCGATCAGGC ATTGGACTGT ATCGCCGGCA GCCTTTGCGC CCAAGCCAGA CGCGACGGGC 7020 TAGAGCGGAT CGACCATGTG CTGCTG 7046 // ID Contig1260 standard; DNA; UNC; 5726 BP. XX DE Contig1260.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..5726 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene complement(3..2132) FT /locus_tag="DeVSDRAFT_0126" FT /colour=9 FT CDS complement(3..2132) FT /locus_tag="DeVSDRAFT_0126" FT /product="TonB-dependent receptor, plug" FT /note="PFAM: TonB-dependent receptor, plug" FT /note="SPTR: A1FX79 TonB-dependent receptor precursor. Stenotrophomonas maltophilia R551-3." FT /note="KEGG: cvi:CV1019 probable TonB-dependent receptor " FT /note="COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins category=P" FT /note="InterPro IPR012910" FT /codon_start=1 FT /transl_table=11 FT /colour=9 FT /translation=" FT MQAVFRPQRRPLSVFLALALSALSAPALAADAEADAPQDRAATTLDQVVVTGSRIPRASLEGPSPVTVINAEQIDKQGFR FT SAFDALAALSQNTGVVQGEDYGNTFTPAANVLNLRGLGPNHTLVLINGRRQADYPLAYEGSVNVVNLANIPSALIERIEV FT LGGGASAVYGSDAVAGVVNFILKKKFEGTQLNVRVGGTEQGGGQNQRLQVVSGHSSDRFDAVYGVELSHRQAIWGDQRDF FT MDSLLDNPTGAAINPTQVGFRRNARTNNYIDPGAACGGLSGLYHGSTFRANNPRQGWYCGSNEAAPAFWTVQTQKKNADA FT YGLLTWHLSDRTELFADVQLGIASIENNTRAPSWTSDNNYFLNQASGLNEIWYRRIAPEEIGSAHANNNRFLERSWAFSV FT GARGALGDSDWNYELAYNHGRNENRTKRRQFLAGINEFFLGPRLGTTAAGIGIYNPDPARLYAPLTPADYQRLTGFYEGV FT NAAWIQNLSFSVNGNLFDLPAGSVGFAGVIEAGTQGYNNRPDPRLGDGTFWNTSAGSRSSGDRDRYAIGAELSIPIFSTL FT TASAAARYDEFRFAGRKSGKATWNAGLEYRPTDTLLLRATAATSFRAPDMNYIFAAETRGYNPGMTDYWRCRTAGQAYDD FT CDFSGLAIDYTSTGNTNLKPENGKSYGLGVVWSPSEHFDLSVDYYSVRLEDEVTNLSSSRIL-EEADCRL FT " FT gene 2639..4411 FT /locus_tag="DeVSDRAFT_0127" FT /colour=13 FT CDS 2639..4411 FT /locus_tag="DeVSDRAFT_0127" FT /product="conserved hypothetical protein" FT /note="SPTR: Q0LM37 Hypothetical protein precursor. Herpetosiphon aurantiacus ATCC 23779." FT /note="KEGG: mxa:MXAN_6410 hypothetical protein " FT /note="COGs: COG5267 Uncharacterized protein conserved in bacteria category=S" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MSSPLSNSERESLRRHLLQRYGALGRAAPSKAARAKLAGARLEAAGAAAPDVHAAPVATLPKDLPKAPFAVRALNNLSYG FT ATAQSVAEFNALGSTGAQRLANWIDWQLDWSNIDDSALDARMAAAGYTTLGKSLTQLWEDHVKPNPAYDIRMRPAWEIQR FT GALVRAVHSKRQLREVMVNFWHDHFNVTVGDYDAGPVYVHYQRDVLRPHAFGNFRAMLEEVAKSTSMLYYLDNAANTRAG FT PNENFARELLELHTLGAEHYLGFMDPFQVPPDADDPNYPSGYTDIDVYETASAFTGWSVKNGHWQYPNDNDGSFVYRQAW FT HDAGPKFLLGRMLYPEQPALKDGRDVLDRLASHPGVARFICKKLIRRFMSDTPDPALVASAAAVFRQNWQAPDQIAKTLR FT HILNTDAFINVWAAKARRPFEAVAAAMRTLGSDWTIAVGNAKSDEFAWRMGFTGHAPYDWPAPNGYPDTREAWSGSSSYA FT MTWKLLNWLTETQDNAVPLAPILATTRSKVPSWTANALVDYWCQRLLGYQPTAARKQTLVAFMAQNGDPATYVITDTNAW FT AATDLKRHYNQERLRSMVSLILMSPEFLTR* FT " FT sig_peptide complement(2028..2132) FT /colour=11 FT /locus_tag="DeVSDRAFT_0126" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 1.000) with cleavage site probability 0.617 at FT residue 35" SQ Sequence 5726 BP; 881 A; 1977 C; 1969 G; 898 T; 1 other; GCGAGGCGGC AGTCGGCTTC CTCNCGCAGG ATGCGGCTGC TGCTGAGGTT GGTGACCTCG 60 TCCTCCAGGC GCACGGAGTA GTAGTCCACC GACAGGTCGA AGTGCTCCGA CGGCGACCAC 120 ACCACGCCCA GGCCGTAGGA CTTGCCGTTC TCCGGCTTGA GATTGGTGTT GCCGGTGCTG 180 GTGTAGTCGA TCGCCAGGCC GGAGAAATCG CAATCGTCGT AGGCCTGCCC GGCGGTGCGG 240 CAGCGCCAGT AGTCGGTCAT ACCCGGGTTA TAGCCGCGGG TTTCGGCGGC GAAGATGTAG 300 TTCATGTCCG GCGCGCGGAA GCTGGTGGCG GCGGTGGCGC GCAGCAGCAA GGTGTCGGTC 360 GGACGGTATT CCAGGCCGGC GTTCCAGGTC GCCTTGCCCG ACTTGCGCCC GGCGAAGCGG 420 AACTCGTCGT AGCGCGCGGC GGCCGAGGCG GTCAGCGTGC TGAAGATCGG GATGCTGAGC 480 TCGGCGCCGA TCGCGTAGCG GTCGCGGTCG CCGCTGGAAC GCGAGCCGGC GCTGGTGTTC 540 CAGAACGTGC CGTCGCCCAG GCGCGGATCG GGACGGTTGT TGTAGCCCTG GGTGCCGGCT 600 TCGATGACGC CGGCGAAGCC GACCGACCCG GCCGGCAGGT CGAACAGGTT GCCGTTGACG 660 CTGAAGCTCA GGTTCTGGAT CCAGGCCGCG TTGACGCCTT CGTAGAAGCC GGTCAGGCGC 720 TGGTAGTCGG CCGGCGTCAG CGGCGCGTAC AGGCGCGCCG GGTCGGGGTT GTAGATGCCG 780 ATGCCGGCCG CGGTGGTGCC CAGGCGCGGG CCGAGGAAGA ACTCGTTGAT GCCGGCCAGG 840 AACTGGCGGC GCTTGGTCCG GTTCTCGTTG CGGCCGTGGT TGTAGGCCAG CTCGTAGTTC 900 CAGTCGCTGT CGCCGAGCGC GCCGCGCGCG CCGACCGAGA ACGCCCACGA GCGTTCCAGG 960 AAGCGGTTGT TGTTGGCGTG GGCCGAGCCG ATTTCCTCCG GCGCGATGCG CCGGTACCAG 1020 ATTTCGTTGA GCCCGCTGGC CTGGTTGAGG AAATAGTTGT TGTCCGAGGT CCAGCTCGGC 1080 GCGCGGGTGT TGTTCTCGAT GCTGGCGATG CCCAGTTGCA CGTCGGCGAA CAGTTCGGTG 1140 CGATCGCTCA GGTGCCAGGT CAGCAGGCCG TAGGCGTCGG CGTTCTTCTT CTGCGTCTGC 1200 ACGGTCCAGA ACGCCGGCGC GGCCTCGTTG CTGCCGCAGT ACCAGCCCTG GCGCGGGTTG 1260 TTCGCGCGGA AGGTCGAGCC GTGATAGAGG CCGGACAAAC CGCCGCAGGC CGCGCCCGGA 1320 TCGATGTAGT TGTTGGTGCG CGCGTTGCGG CGGAAGCCGA CCTGGGTCGG ATTGATCGCC 1380 GCGCCGGTGG GATTGTCGAG CAGCGAGTCC ATGAAGTCGC GCTGGTCGCC CCAGATCGCC 1440 TGGCGGTGCG AGAGCTCGAC GCCGTAGACC GCGTCGAAGC GGTCGCTGGA ATGCCCGCTC 1500 ACCACTTGCA GGCGCTGGTT CTGGCCGCCG CCTTGCTCGG TGCCGCCGAC GCGCACGTTG 1560 AGCTGGGTGC CTTCGAACTT CTTCTTGAGG ATGAAGTTGA CCACGCCGGC GACCGCGTCG 1620 GAGCCGTACA CCGCCGAGGC GCCGCCGCCG AGCACTTCGA TGCGTTCGAT CAGCGCGCTG 1680 GGAATGTTGG CGAGGTTGAC GACGTTGACC GAGCCTTCGT AGGCCAGCGG ATAGTCGGCC 1740 TGGCGCCGGC CGTTGATCAG CACCAGGGTG TGGTTCGGCC CCAGCCCGCG CAGGTTGAGC 1800 ACGTTGGCTG CGGGCGTGAA GGTGTTGCCG TAGTCCTCGC CCTGGACCAC GCCGGTGTTC 1860 TGGCTCAACG CGGCGAGCGC GTCGAAGGCG CTGCGGAAAC CTTGCTTGTC GATCTGCTCG 1920 GCGTTGATGA CGGTGACCGG CGACGGGCCT TCCAGGCTCG CGCGCGGGAT GCGCGAGCCG 1980 GTGACGACGA CCTGGTCGAG CGTGGTGGCG GCGCGATCTT GCGGCGCGTC GGCCTCGGCA 2040 TCGGCCGCCA GCGCGGGCGC GGACAACGCC GACAGCGCGA GGGCGAGAAA CACGGACAAG 2100 GGCCGGCGCT GCGGCCGGAA CACGGCTTGC ATGGGGGAAA TCCTCTGCGG ATGGAAGGCC 2160 CGGGGCCGCG CTTGGTGGAA TCCCCTTATG CGCGCCGCGG CGATGGAGCA TCTTTGTTGC 2220 TGCGCAACAT GAGCAGAAAT GAAGCCCGCG CATCTGCTTA TGTCGTGCCG GTATTTGCTT 2280 CTTCGCGCAT CAGTCTGCCG CGCGCGTTGC AGCGGGCGTG TGCCGCCGCG CACGGATCGC 2340 GAACGCGCGC GAGCCGCACG GCGATGCTCT CGAAACAGCA AATGCGGCAA AGCGCACGAG 2400 CCGCACGACA CGGCGTAAGC GCAGCGCGCG TGGCCGATGT CACGCGCGAG CCGCAAAGCG 2460 TTTGGCGCCT GCGCGGCGAG GCGGCGAGAG CCACGCGCAA ACAGTGACGC CGCGCATCCG 2520 CGTTCATGGC GTTCTGTGAT CCGTCGCGGA CTTTGCCGCT TGCCGCCGCC CTAAGCTCGC 2580 GCCCCCGTTC GCCCGCCGTC GTCACGCCGT GTCGACGCCA GCCCAACCGG AGTGCGCCAT 2640 GTCCAGCCCG CTGTCGAATT CCGAGCGCGA ATCGCTGCGC CGCCATCTGC TGCAGCGCTA 2700 CGGCGCGCTC GGCCGCGCCG CGCCGTCCAA GGCCGCGCGC GCCAAGCTCG CCGGCGCACG 2760 GCTCGAGGCC GCCGGCGCCG CCGCGCCCGA CGTCCACGCC GCGCCGGTCG CGACCTTGCC 2820 CAAGGATTTG CCGAAAGCGC CGTTCGCGGT GCGCGCGCTC AACAACCTCA GCTACGGCGC 2880 CACCGCGCAG AGCGTGGCCG AGTTCAACGC GCTCGGCAGC ACCGGCGCGC AGCGCCTGGC 2940 CAACTGGATC GACTGGCAGT TGGATTGGTC GAACATCGAC GACAGCGCGC TCGATGCGCG 3000 CATGGCCGCG GCCGGCTACA CCACGCTCGG CAAGTCGCTC ACGCAGCTGT GGGAAGACCA 3060 CGTCAAGCCC AATCCGGCCT ACGACATCCG CATGCGCCCG GCCTGGGAGA TCCAGCGCGG 3120 CGCGCTGGTG CGCGCGGTCC ACTCCAAGCG CCAGTTGCGC GAGGTGATGG TCAACTTCTG 3180 GCACGACCAC TTCAACGTCA CCGTCGGCGA TTACGACGCC GGCCCGGTGT ACGTGCATTA 3240 CCAGCGCGAC GTGCTGCGCC CGCACGCGTT CGGCAACTTC CGCGCGATGC TCGAAGAAGT 3300 GGCCAAGAGC ACCTCGATGC TCTACTACCT CGACAACGCC GCCAACACCC GCGCCGGCCC 3360 GAACGAGAAC TTCGCCCGCG AGCTGCTGGA GCTGCACACG CTCGGCGCCG AGCACTACCT 3420 GGGCTTCATG GATCCGTTCC AGGTGCCGCC GGATGCGGAC GACCCGAACT ATCCCTCCGG 3480 CTACACCGAC ATCGACGTGT ACGAAACCGC GTCGGCCTTC ACCGGCTGGT CGGTCAAGAA 3540 CGGGCATTGG CAATACCCCA ACGACAACGA CGGCAGCTTC GTCTATCGCC AGGCCTGGCA 3600 CGACGCCGGG CCGAAGTTCC TGCTCGGGCG CATGCTCTAT CCCGAGCAGC CGGCGCTCAA 3660 GGACGGGCGC GATGTGCTCG ACCGCCTCGC CAGCCATCCG GGCGTGGCGC GCTTCATCTG 3720 CAAGAAACTG ATCCGGCGCT TCATGTCCGA CACGCCCGAT CCGGCGCTGG TGGCCAGCGC 3780 GGCGGCGGTG TTCCGGCAGA ACTGGCAAGC GCCGGACCAG ATCGCCAAGA CCTTGCGCCA 3840 CATCCTCAAC ACCGATGCCT TCATCAATGT GTGGGCGGCC AAGGCGCGGC GTCCGTTCGA 3900 AGCGGTGGCC GCGGCGATGC GCACGCTCGG CAGCGACTGG ACCATCGCGG TCGGCAACGC 3960 CAAGAGCGAC GAATTCGCCT GGCGCATGGG CTTCACCGGC CACGCGCCCT ACGACTGGCC 4020 GGCGCCGAAC GGCTATCCCG ACACGCGCGA AGCGTGGTCG GGTTCCAGCA GCTATGCGAT 4080 GACCTGGAAG CTGCTCAACT GGCTTACCGA AACCCAGGAC AACGCCGTGC CACTGGCGCC 4140 GATCCTGGCG ACCACGCGCA GCAAGGTGCC GTCGTGGACC GCCAATGCGC TGGTCGATTA 4200 CTGGTGCCAG CGCTTGCTGG GCTATCAACC GACCGCGGCG CGCAAGCAGA CGCTGGTGGC 4260 GTTCATGGCC CAGAACGGCG ACCCGGCCAC CTATGTCATC ACCGACACCA ACGCCTGGGC 4320 CGCCACCGAC CTCAAGCGCC ACTACAACCA GGAGCGGCTG CGCAGCATGG TCTCGCTGAT 4380 CCTGATGTCG CCCGAATTCC TCACCCGCTG AGCAGGTGCC GCCATGACCA CCCGACGCGA 4440 TTTCCTCAAA GGCACCTGCG CCACCGCCGC CGCGACCGCG GTCGGCGGGC CGTCGCTGCT 4500 GTTCGCCGCG CCCGCCTTCG CCGCCGCCAA CGGCCACGAC ACCGTCGTGC ATCTGTTCCT 4560 GCGCGGCGGC CTGGACGGCC TCAACCTGGT GGTGCCGATC GACGGCGCCG ACCGCACGTT 4620 CTACGAACAG GCGCGGCCCA ACCTCGCCAT CGCCGCGACC GGCAGCTACG GCGCGCTGCC 4680 GCTGACCCTG GCCAGCGGCG GCGGCACCGG TTTCGGCCTG CATCCCTCGG CGACGGGGCT 4740 GCGCGATCTG TGGGTCGCCG GGCGCCTGGG CATCGTGCAT GCCTGCGGCC TGCTGACCAG 4800 CGTCACCCGC AGCCACTTCG ACGCCCAGCT CTACATCGAC CTGGGCACGC CCGGCGCGCA 4860 AGGCATCGGC AGCGGCTGGA TGGCGCGGGC GATGAACACC CAGCCCAACC TCAACGGCAG 4920 CGAGCAACTG CCGGCGCTCG GCGTCGGCGC GCGCCAGCCC GCGGGCCTGC TGTCGTCGGT 4980 GCAGGCGCTG ACCATGGCCA GCCCGTCGGA CTTCGCGCTC AACGCCGGCG CGTGGTCGTG 5040 GCAGATGGCG CGCAGCGGCG CGCCGACCGG CTTTCGCGGC GTCAACGAAA CCTTGGCCAG 5100 CTTGTGGACC GGCACCTCAG CGCTGGAACT GGGCGGCCAG CGCGCCGACC GCGCGCTGCA 5160 GGTGATCGCC AAGCAAAGCT ACAGCGCGGT GCCGGCCGGC TGGCCGACCA CGACCTTCGC 5220 CCAGCAGCTG TGGACCATCG CCCAATCGAT CCAGTTCGGC CTCGGCCTGC ACTACGCCAC 5280 GCTCGACCTC GGCGGCTGGG ACACGCACGA CGGCCAGGGC ACCGCCGGCA GCGGTTATCA 5340 CTACTACCAG AACAAGATCG CCGAACTCTC GCAGGGCTTG TCGGCGTTCT ACGCCGCGCT 5400 CGACGCCAGC GGCCACGCCG GCCGGGTGAC CGTGGTCGTG CAGTCCGAAT TCGGCCGGCG 5460 CGTACGCGCG AATGCCAACG GCGGCACCGA CCACGGCTAT GGCAATCCGG TGCTGGTGCT 5520 CGGCGGCGCG GTCAACGGAC GGCGCTTCTA CGGCTCGTGG TCGGGGCTGG ATCCGGAAAT 5580 CCTGTCGCCG CACTTCGGCG ACGTGCCGGT CACCACCGAC CATCGCCAAG TCTTGGCCGA 5640 ACTGCTGGTC AAGCGCATGG GCAACAGCAA CCTGGCCAAT GTGTTCCCCG GCTACAGCGG 5700 CTATGCGCCG ATGGGCATCG TGCGCG 5726 // ID Contig1263 standard; DNA; UNC; 7938 BP. XX DE Contig1263.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..7938 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene 534..1964 FT /locus_tag="DeVSDRAFT_0128" FT /colour=12 FT CDS 534..1964 FT /locus_tag="DeVSDRAFT_0128" FT /product="adenosylhomocysteinase" FT /EC_number="3.3.1.1" FT /note="TIGRFAM: adenosylhomocysteinase" FT /note="PRIAM: Adenosylhomocysteinase" FT /note="PFAM: S-adenosyl-L-homocysteine hydrolase" FT /note="SPTR: A1FWP7 Adenosylhomocysteinase (EC 3.3.1.1). Stenotrophomonas maltophilia R551-3." FT /note="KEGG: xcb:XC_3482 adenosylhomocysteinase " FT /note="COGs: COG0499 S-adenosylhomocysteine hydrolase category=H" FT /note="InterPro IPR000043" FT /codon_start=1 FT /transl_table=11 FT /colour=12 FT /translation=" FT MNAVPKTFSTEGDYKVADISLADWGRKEIDIAEHEMPGLMSIRKKYAAAQSLKGVRVTGSLHMTIQTAVLIETLRDLGAD FT VRWASCNIFSTQDHAAAAIAASGTPVFAWKGESLEEYWDCTLAALSFPNGQGPELVVDDGGDVTLLIHKGYELENGDGWV FT NTPSGNHEEQVIKNLLKRVHAERPGFWHEVVKHWKGVSEETTTGVHRLYQLAEAGSLLIPAINVNDSVTKSKFDNLYGCR FT ESLADGLKRAMDVMLAGKVAVVCGYGDVGKGSAHSLRAYGARVVVTEIDPINALQAAMEGFEVNTVESTLGRGDIYVTTT FT GNKDVLTLEHMSKMKDQAIVCNIGHFDNEIQVDALNASGAKRLNIKPQVDKYTFANGNSIFLLAEGRLVNLGCATGHPSF FT VMSNSFSNQTLAQIDLWANKDTYEPKVYILPKKLDEEVARLHLEKIGVKLTTLTDDQAKYLGVAVEGPYKPDHYRY* FT " FT gene complement(4288..6939) FT /locus_tag="DeVSDRAFT_0129" FT /colour=9 FT CDS complement(4288..6939) FT /locus_tag="DeVSDRAFT_0129" FT /product="YD repeat protein" FT /note="TIGRFAM: YD repeat protein" FT /note="PFAM: YD repeat-containing protein" FT /note="SPTR: Q6JCV7 Glycinecin R. Xanthomonas campestris pv. glycines." FT /note="KEGG: xcv:XCV2715 rhs family protein " FT /note="COGs: COG3209 Rhs family protein category=M" FT /note="InterPro IPR006530" FT /codon_start=1 FT /transl_table=11 FT /colour=9 FT /translation=" FT VHLSQGRPAQDHRCGGAGHRNLRLRPARLGVVGGRSQRRGHRRRVQHPRLADGQQGARYRQRRRDGRPGHQDRVFPHRPD FT QAGHACGRKLHDLRLRQRAAPDRRDRPLRRDGAVHAGPGRQPQGRRHQEQRRHRAGDAVARLQRSGPGADLQGRPEPRDR FT LHLRRRGPSGHDHRRARARERPGLRPARTIGQNLQDVGHGRINAEPKIEYDALDQVTKVIDPKGLSTVYARNGFGELTQL FT TSPDTGVTGYTYDAAGQTKTRTDARGIATTYSYDALGRLTQRAYPTAVLGTTYTYDTVASGCPTGETFSKGRLSQSVGTG FT GALRYCYDRFGRMVRKIVVTTGPVLTLRYAYTAAGALKSVTYPDGTVADYVRGNHGRTTQIGVTRPGSTREILLTSVGYA FT AYGPSAGWAYGNNQPMTRNVDRNYDVSRLVGSAPDGLSLHLARDEVGNVSRFSTQNQSTILARYQYDRLDRLTQTQDGPT FT ATALETYGYDATGNRTSFQSGASAAQSYTFPSTSHRLQSVAGIARTYDAAGNTTSAGGTAKQYVYNDLGRLGQFKVDGAV FT KMNYAYNGLGQQARRYNETSIRHALYDEAGSWLGEYDNAGTALQQVVWMDDLPVGVIQGSGTTQKLYYIEPDHLGTPRIV FT VDPRRNKAVWTWNIKSEAFGNTPPNEDPDLDGAKFVFDMRFPGQRFEAVSGLIYNYYRDYDPTTGRYLQSDPIGQLGGID FT TYGYAGGSPLSFSDPSGLLTVRAYVNRGGGRGNEWRYALEFNPFSIKNAPGWGGMLRKGVNKLETAIKAMKPSGVGPLHP FT LRDYLECGQLDGKLKDEYERAGYQPGQQLTRAQAEAFLNSMYLSHAEMRKLYDRPGAMLDNAESAGMGNWFNSLMDQAHP FT GEL* FT " FT gene complement(3236..3751) FT /locus_tag="DeVSDRAFT_0130" FT /colour=13 FT CDS complement(3236..3751) FT /locus_tag="DeVSDRAFT_0130" FT /product="hypothetical protein" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MKQTKKRMQALRQWAGLRLQMKVVILFFCFVAVFLSGCAEGRPEELRRLEAMGLEQARSDFQKLPPHTQVRIVVWELEHR FT KPSSSRFDYLLDRNGWKVGPFLLAEAARAKSLDVNVTLLLELADLGRLPIAGDDVQLVAAIARCYELGGQENRECEDLRL FT KLAAHVLRKGQ* FT " FT gene complement(4037..4288) FT /locus_tag="DeVSDRAFT_0131" FT /colour=13 FT CDS complement(4037..4288) FT /locus_tag="DeVSDRAFT_0131" FT /product="hypothetical protein" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation="VTYLRRFGLASFSSFVVLLSYTLALKISSQINADILLAFTMGALACCLVAGGIAAAIFRRNMIVLVISSQILSIALIGIVWRL*" FT misc_feature complement(3623..3688) FT /colour=11 FT /locus_tag="DeVSDRAFT_0130" FT /note="1 probable transmembrane helix predicted by FT TMHMM2.0" FT misc_feature complement(order(4046..4102,4118..4183,4214..4267)) FT /colour=11 FT /locus_tag="DeVSDRAFT_0131" FT /note="3 probable transmembrane helices predicted by FT TMHMM2.0" FT sig_peptide complement(3632..3751) FT /colour=11 FT /locus_tag="DeVSDRAFT_0130" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 0.967) with cleavage site probability 0.500 at FT residue 40" FT sig_peptide complement(4199..4288) FT /colour=11 FT /locus_tag="DeVSDRAFT_0131" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 0.988) with cleavage site probability 0.622 at FT residue 30" SQ Sequence 7938 BP; 1499 A; 2570 C; 2396 G; 1473 T; 0 other; GGCGCCGGCG CGGCGTGCGC CGACAGGCTC AGCGCCAATG CGGCCGGCAG CAGCAGGCGC 60 GCGATCAACG CGGCGTGCGG AGCGCGCGGC GGCGCGCGAA TGCGGCGGTC GGAACGGCGC 120 GCGGGCGGCT TCATGCAGAT CGGTCCTCGG ATGCGGAGAA ATGCGGAGCG CAGCGCCGCG 180 CGCCCGCCCG CCCGCGTCGC GTCCGGCGGC GATGCGCGGT CGCGCTCCCC GCCCCGAGCT 240 TAGCCGGCCC GCGCGGCCGC GCGCCTATGC CGTTGGGGCT GGTTCGCAGG CCGCGTGTGT 300 CGGCGCGCAT CGCACCCTGC GACGGCCGCC GCGTTCAGTC TCGCGCTGCC CCGCCTTGGG 360 GCCGCCACGG GGGCCGCGAT ATACTGCGCG CTCGGCCCGC CGAGGGGCGC TGCGACCGTG 420 ACGGACACGG CCGGGCTCGG CGAGCCGCAG GTCCCAACGA CGCCCGGTTT GAGTCTCCGC 480 GACTCGCCGG GACCGGCATC CCGCCGGCTC CCCCCGCACT GGAGCTAATC CGAATGAACG 540 CTGTACCCAA GACCTTCTCG ACCGAAGGCG ATTACAAGGT CGCCGATATC TCCTTGGCCG 600 ACTGGGGCCG CAAGGAAATC GACATCGCCG AGCACGAAAT GCCGGGCCTG ATGTCGATCC 660 GCAAGAAGTA CGCCGCCGCG CAGTCGCTCA AGGGCGTGCG CGTGACCGGC TCGCTGCACA 720 TGACCATCCA GACCGCGGTG CTGATCGAGA CCCTGCGCGA CCTCGGCGCC GACGTGCGCT 780 GGGCCTCGTG CAACATCTTC TCGACCCAGG ACCACGCCGC CGCGGCGATC GCCGCCAGCG 840 GCACCCCGGT GTTCGCCTGG AAGGGCGAGT CGCTGGAGGA ATACTGGGAC TGCACCCTGG 900 CCGCGCTGAG CTTCCCCAAC GGCCAGGGCC CGGAGCTGGT CGTCGACGAC GGCGGCGACG 960 TGACCCTGCT GATCCACAAG GGCTATGAGC TCGAGAACGG CGACGGCTGG GTCAACACCC 1020 CGTCGGGCAA CCACGAAGAG CAGGTCATCA AGAACCTGCT CAAGCGCGTG CACGCCGAGC 1080 GCCCGGGCTT CTGGCACGAA GTGGTCAAGC ACTGGAAGGG CGTCTCGGAA GAGACCACCA 1140 CCGGCGTGCA CCGCCTGTAC CAGCTGGCCG AAGCCGGCTC GCTGCTGATC CCGGCGATCA 1200 ACGTCAACGA CTCGGTCACC AAGAGCAAGT TCGACAACCT CTACGGCTGC CGCGAGTCGC 1260 TGGCCGACGG CCTCAAGCGC GCGATGGACG TGATGCTGGC CGGCAAGGTC GCGGTGGTGT 1320 GCGGCTACGG CGACGTCGGC AAGGGCTCGG CCCACTCGCT GCGCGCCTAC GGCGCCCGCG 1380 TCGTGGTCAC CGAAATCGAC CCCATCAACG CCCTGCAGGC GGCGATGGAA GGCTTCGAGG 1440 TCAACACCGT CGAAAGCACC CTGGGCCGCG GCGACATCTA CGTCACCACC ACCGGCAACA 1500 AGGACGTGCT GACGCTGGAG CACATGTCGA AGATGAAGGA CCAGGCCATC GTCTGCAACA 1560 TCGGCCACTT CGACAACGAG ATCCAGGTCG ACGCGCTCAA CGCCTCGGGC GCCAAGCGCC 1620 TGAACATCAA GCCGCAGGTC GACAAGTACA CCTTCGCCAA CGGCAACTCG ATCTTCCTGC 1680 TGGCCGAAGG CCGCCTGGTC AACCTCGGCT GCGCCACCGG CCACCCGAGC TTCGTGATGT 1740 CGAACTCGTT CTCCAACCAG ACCCTGGCCC AGATCGACCT GTGGGCGAAC AAGGACACCT 1800 ACGAGCCGAA GGTCTACATC CTGCCGAAGA AGCTCGACGA AGAAGTCGCG CGCCTGCACC 1860 TGGAAAAGAT CGGCGTGAAG CTCACCACCC TGACCGACGA CCAGGCCAAG TACCTGGGCG 1920 TGGCGGTGGA AGGTCCGTAC AAGCCGGATC ATTACCGCTA CTGATCGGGT CGCCTTCGGG 1980 CGACAAGCTG TAAATGAAAA CGGGCGCCTT CGGGTGCCCG TTTTTGTTAC GACACAGCCA 2040 GCGTCCGTTG ATAGATACCG ACAATCGACG CTTGTACCGG AACAAACTTA ACTCAACCCC 2100 GCTCGCTTCG CCGCTCCATC GCCATCGACA AAGGCCAGGA CCATCGTCAT TCCGTTCGAA 2160 ATCGCTTCGA TCGCGTTTGC GATGTCCTCG CCGCCCAGCT CGGACAGCCC AGCGCCTACC 2220 GCCGAGCCGC CGGACGTCCA CGAAAAAAAC GTTCGTAACT TCTCAGCAGG CCGCCATCGT 2280 TCAAGCTGAA GCCAACAACC ATGTCGCGGG GCAAACTGCC GCGTATGTCG ATCAGCATGT 2340 TCCAGCAGTT CATGAGCTCA TCGCTTCGCG CGACATTTCC GGCAGCGAGT TCGATCAACG 2400 CTGAATCCAT ATCGAAAACC TCGCCATCCT CGAAGCAGAA CTGGTCGCCC AAGCGCGAGA 2460 GCCTTTCGAT CAAAACGGAC TTCTCGTGCG CCCAAAGAAC GACGCCACGC CACTTCAACA 2520 AGGCGCACTC AGGCTGATCG ACAGATCGCC AAGCGAACCA GATGCGATGC TTCTGAGCGA 2580 TGACGCAAAC GGGGTAAATT ATCGAATCCA TGCCGTCGTC CGACCAACCT CTGCTTCGCC 2640 ACCTTTCGCT TCAAAGAGCG ACCCAATGCG TGGCCCCATA AGCTCATATT CGCGTCGTCG 2700 CTGACTGACT CTATTTGAGC AACATATCCC CGTAAGTCGT GCAGACCTCG TCACGTTCAT 2760 CACCGGCCAG ACGCTTGCAT CTCTCGACCG CCGCCACCAA CTGCGAACGA GCCAATTTCG 2820 ACCTCGAACC GGCTGGCAGC TTGGCCAGCG ACCTCACAAT TGAAGCCTGC ACGAGATACC 2880 CATCGCTTCG ATTGGCCGCA TCAAGAAGCG GCTCGGCAAC AGCGCCAGCG TTCTCGCGCA 2940 GCAGGAACTC GTAACGCGAA GCCACAGGCT TGCTATGGGT GAGTTCCCAT AGGTAAACGC 3000 CGACCTGATC TTTGGCGTCA AGCGCTTTGA ACCGGGAGAA AGCCTCTTGG TCCGGAAGCT 3060 CGTTGAGTTG CTTATTGAGT CGGCAGGCAT TGTCGTTACA ACACGCCGAT AAACAGAGCA 3120 CGACAAGGAC TCCTAGCGCC TTAGCCATTG AACCGTCACC AGGAAACAGG GCCATAGAAC 3180 GGTCAAGTAG TCAGCACAGC AGACTACGAT CTTTCAATCG CACCACGCTC GTAGATCATT 3240 GTCCTTTCCG AAGCACGTGA GCGGCCAGTT TCAGACGAAG ATCCTCACAC TCACGATTTT 3300 CTTGCCCTCC CAACTCATAG CAACGGGCAA TAGCCGCGAC GAGTTGGACA TCATCACCGG 3360 CAATCGGCAA TCGCCCTAGG TCCGCAAGCT CCAGCAACAA AGTGACATTG ACGTCCAGGC 3420 TCTTTGCCCG GGCGGCCTCG GCCAAAAGAA AAGGACCCAC CTTCCATCCA TTGCGATCCA 3480 GCAAATAGTC GAACCGCGAA GAGGACGGCT TGCGATGCTC CAGCTCCCAA ACCACTATGC 3540 GGACCTGCGT ATGCGGCGGA AGCTTCTGGA AATCCGACCG AGCTTGCTCC AAACCCATAG 3600 CTTCCAATCG GCGAAGCTCT TCCGGCCGCC CTTCCGCGCA GCCGGAAAGA AAGACAGCGA 3660 CAAAGCAGAA AAATAAAATC ACGACTTTCA TTTGCAATCG CAACCCAGCC CATTGGCGCA 3720 AGGCCTGCAT TCGCTTTTTT GTCTGTTTCA TAACTTGGCG CCACGCGGCA GAGCCATAGC 3780 CCCAAAACAG TGGTAGCCCA GGCTATTGAC CGCAGCGCAG TGCCGGCATT TTCGTATTCG 3840 CCGAGTCAAA TGCCGTCTTC GGCGCACAAC GAATGCCGGA TGCTGGTTTC GTTGTAACAG 3900 CGCGCTTGCT GCCCCAGGCC GCTGCAGGCG TAGTTGCCAT CTGCAGCGCG CCATCCACTT 3960 TGAACTGGAC CAGGTGATCC AATATGAAGC GGCAACACGC ATCAGCGTGC CGAATACAAC 4020 TACGTGCCTA CCACCCTCAT AGGCGCCATA CAATGCCGAT TAAAGCAATA GACAGTATCT 4080 GGGACGAAAT CACCAGCACA ATCATATTTC TTCGAAAAAT CGCTGCCGCA ATCCCGCCGG 4140 CAACCAAACA ACACGCCAGC GCCCCCATGG TAAACGCCAA AAGGATATCG GCATTGATTT 4200 GGGAGGAAAT CTTCAATGCC AGCGTGTAGC TCAACAGGAC TACAAACGAT GAAAATGAAG 4260 CCAATCCAAA CCTTCTCAGA TAAGTCACTA GAGCTCCCCC GGATGCGCTT GATCCATCAG 4320 TGAATTGAAC CAATTCCCCA TGCCCGCCGA TTCGGCATTA TCGAGCATAG CGCCCGGTCG 4380 GTCATACAAC TTGCGCATCT CTGCGTGCGA TAGGTACATC GAGTTGAGGA ATGCCTCAGC 4440 TTGTGCGCGG GTCAACTGCT GTCCTGGCTG ATAGCCTGCA CGTTCATATT CGTCCTTCAG 4500 TTTGCCATCC AACTGCCCGC ACTCAAGATA GTCGCGAAGA GGATGCAGTG GCCCAACCCC 4560 ACTGGGCTTC ATAGCTTTGA TTGCAGTCTC AAGCTTATTG ACACCTTTCC TAAGCATCCC 4620 ACCCCAACCA GGAGCATTCT TTATTGAGAA CGGATTGAAC TCCAAGGCAT ACCGCCACTC 4680 GTTCCCTCGT CCACCACCAC GATTTACATA CGCTCTAACT GTCAAAAGAC CCGACGGGTC 4740 AGAGAAAGAA AGCGGACTCC CTCCGGCGTA GCCATACGTA TCGATCCCGC CCAACTGCCC 4800 AATGGGATCG CTTTGTAAAT ATCGACCTGT TGTTGGGTCA TAGTCACGAT AGTAGTTGTA 4860 GATCAGCCCG CTGACCGCCT CAAACCGCTG CCCCGGGAAC CGCATGTCGA ACACGAACTT 4920 CGCGCCATCG AGATCCGGAT CTTCATTCGG CGGTGTATTG CCGAACGCTT CGCTCTTGAT 4980 GTTCCACGTC CACACCGCCT TGTTGCGCCT CGGATCGACC ACGATCCGCG GCGTGCCCAG 5040 GTGGTCGGGC TCGATGTAGT ACAGCTTCTG CGTCGTGCCT GAGCCTTGGA TCACGCCGAC 5100 CGGCAGGTCG TCCATCCACA CGACTTGCTG CAACGCGGTG CCTGCATTGT CGTACTCGCC 5160 TAGCCAACTG CCAGCCTCGT CATACAGCGC ATGCCGGATG CTGGTCTCGT TGTAGCGGCG 5220 CGCCTGCTGT CCCAAACCGT TGTAGGCGTA GTTCATCTTC ACCGCGCCGT CGACCTTGAA 5280 CTGGCCCAGG CGGCCCAGGT CGTTGTAGAC GTACTGTTTG GCAGTACCTC CGGCGCTGGT 5340 GGTATTGCCG GCGGCGTCGT AAGTACGGGC GATGCCGGCG ACGCTTTGCA GACGGTGGCT 5400 AGTGCTCGGG AACGTATAGC TCTGCGCCGC GCTCGCTCCG CTCTGGAAGC TGGTGCGATT 5460 GCCGGTAGCG TCGTAACCGT AGGTTTCCAG CGCTGTCGCG GTCGGGCCGT CCTGCGTCTG 5520 GGTCAGGCGG TCGAGCCGGT CGTACTGGTA GCGCGCCAGG ATGGTCGATT GGTTCTGCGT 5580 GCTGAAGCGG CTGACGTTGC CGACCTCGTC GCGGGCCAGG TGCAGCGACA AGCCATCGGG 5640 CGCCGAGCCG ACCAGGCGCG AGACGTCGTA GTTGCGGTCG ACGTTGCGCG TCATCGGCTG 5700 GTTGTTGCCG TACGCCCAGC CTGCCGACGG GCCATAAGCG GCGTAGCCCA CGGACGTCAG 5760 CAGGATTTCG CGGGTCGAGC CCGGGCGGGT CACGCCGATC TGGGTGGTCC GGCCGTGGTT 5820 GCCGCGCACG TAGTCGGCCA CGGTGCCATC GGGATAGGTC ACCGACTTCA GCGCGCCCGC 5880 CGCCGTGTAG GCGTAGCGCA AGGTCAGCAC CGGGCCGGTG GTGACTACGA TCTTGCGGAC 5940 CATGCGACCG AAGCGGTCGT AGCAATAGCG CAAGGCGCCA CCGGTGCCGA CGGACTGGCT 6000 CAGCCGTCCC TTGGAGAAGG TTTCCCCGGT CGGGCAGCCG GACGCGACCG TGTCGTAAGT 6060 GTAGGTCGTG CCCAGCACGG CGGTGGGGTA AGCCCGCTGG GTGAGGCGGC CCAATGCGTC 6120 GTAGCTGTAC GTGGTGGCGA TGCCGCGCGC ATCGGTCCGC GTCTTGGTCT GGCCCGCTGC 6180 ATCGTAGGTA TAGCCGGTCA CGCCGGTGTC GGGGCTGGTC AGCTGAGTCA GCTCGCCGAA 6240 TCCGTTGCGC GCGTAGACCG TGGACAGGCC CTTCGGATCG ATCACCTTGG TCACTTGATC 6300 GAGCGCGTCG TACTCGATCT TGGGTTCCGC GTTGATCCGG CCGTGCCCGA CGTCCTGCAA 6360 GTTTTGACCA ATCGTCCGAG CGGGTCGTAG TCCTGGTCGC TCACGCGCCC GAGCGCGTCG 6420 GTGGTCGTGT CCGGATGGCC CTCGGCGTCG TAGGTGTAGC CGGTCGCGTG GTTCAGGCCG 6480 TCCTTGTAGG TCTGCACCTG GCCCAGAACG TTGAAGACGC GCGACAGCGT CGCCTGCACG 6540 GTGCCGGCGC TGTTCTTGGT GTCTTCGACC TTGCGGTTGC CGGCCAGGTC CAGCGTGTAC 6600 TGCACCGTCG CGCCGGAGCG GTCGGTCACG CCGGTCAGGC GCTGCGCGTT GTCGTAAGCG 6660 AAGGTCGTGA AGTTTCCGTC CGCAAGCGTG ACCTGCTTGG TCAGGCCGGT GGGGAAATAC 6720 TCGATCTTGG TGACCAGGTC GTCCGTCTCG ACGGCGTTGT CGATACCGCG CACCTTGCTG 6780 GCCGTCAGCC AGCCGCGGGT GTTGTACTCG GCGTCGGTGA CCACGCCGTT GGGATCGACC 6840 ACCGACAACA CCCAGCCTTG CGGGTCGTAG CCGGAGATTT CGGTGACCAG CCCCGCCGCA 6900 TCGATGGTCT TGCGCAGGTC GCCCTTGCGA AAGGTGCACA GCGTCGGCGT GGTCGCGCAG 6960 GTGCTGTCGT CGCTGCTGAA GTACTCGAAG TGAGTGATGT CGTTCACGTC CGTGCGCGGG 7020 CCATCCACCG ACTTCAGCAG GCCCAGGAGC GGGCAGGCGC TGTTGGCGGC GACATCGGCG 7080 GCTTCGCAGT AGGTGTAGGT GGTGGTGCGA GTCACGTTGG CGACGGTGTC GCGTACGGCC 7140 ACGCTGACCG GCTGGAACCG GGCGTTGCGG GTGATCCGGG TCTCCTGGTT GCCGATGGCC 7200 GAGCGGATCA GGCGGTTGCT GGCGATATCG GTCGTCGCGG TGCTGACCCG CTGCTCGGGC 7260 TTGCCGACCG CCTCGGTGGT CGTGACGGTG CGCGCGAGCG CGCCGGTGAC CGCGTCGTTG 7320 GCTTCGGCGT AGGCGAACTC CGACTTGGTG CCCTTCCGAT CGGTCAGGCT GGCCGGACGG 7380 CCACGGAAGT CGGCGGACTC GGGGTTGTAC GTATTCTTGA CCGTGCCCTT TTCGTCGATG 7440 ACGTCGCCGA ACCGGCGCGG CAGCACGCCG GTGCCGCTGG TCAGGCCGTA GGTCGTCTTC 7500 TGGCCCAGCG AATCGGTCAC GTCCGTTCCG CCTTCAGGGC GGTAGGTCAG CGTGATCTTG 7560 TCGGCGCCGC CGTCATGCTG GCTGGAGATC ACCCGGCCCT TAGCGTCGTA GGCGAAGGTG 7620 CTGTAGCGCT TGTTGTCCTC GTGGGTGACC CCAGTCAGGT GGCGCGGGAA CCGGCTATCT 7680 TCGTAATGGT ACTTGCGCTT GTCGCCGCCA GCGAACGTCG CGATCTCTAC CTGCCGTCCC 7740 GCCGTGTAGG CGTAACTCGC CAGCGTCTTG CCTTCCGACG CGATCGAGGC GATCGAGGCA 7800 TCGCCCGACG GCTCGGCATA CACGAACTGC AGCGAGCGCC CGCTGGAGTG AGTCACCTTG 7860 TCCAGACGGT CGTACTCGCC ATAGGCGCAG GTCAGCCCGG TGCCGTCTTC GTTTCGCCGC 7920 TCGATCAAAC GCCCTGAG 7938 // ID Contig1264 standard; DNA; UNC; 5020 BP. XX DE Contig1264.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..5020 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene complement(108..842) FT /locus_tag="DeVSDRAFT_0132" FT /colour=15 FT CDS complement(108..842) FT /locus_tag="DeVSDRAFT_0132" FT /product="response regulator receiver protein" FT /note="PFAM: response regulator receiver; LytTr DNA-binding region" FT /note="SPTR: A1FWN8 Response regulator receiver protein. Stenotrophomonas maltophilia R551-3." FT /note="KEGG: sru:SRU_0416 two-component system, regulatory protein " FT /note="COGs: COG3279 Response regulator of the LytR/AlgR family category=T" FT /note="InterPro IPR001789:IPR007492" FT /codon_start=1 FT /transl_table=11 FT /colour=15 FT /translation=" FT MNLRPLSVLIVDDTRLARQELRTLLAQSPQVEVLGEAEDVPQAQEAIARLRPDLVLLDIQMPSGSGFDVIAGLDSAPLVV FT FTTAYDQYAVQAFEANALDYLVKPVEPGRLAAALQRARQRLPSETAPSEPRGPLGADDQVFLRDGERCWFVALREVHRIV FT VDGNYARVWFRNECALLARSLSALEARLDPSLFFRANRNTLVNLRSVKSVELAVGDGYELELKDGSRVEVSRRQSRELRE FT RLSL* FT " FT gene complement(839..1885) FT /locus_tag="DeVSDRAFT_0133" FT /colour=15 FT CDS complement(839..1885) FT /locus_tag="DeVSDRAFT_0133" FT /product="signal transduction histidine kinase, LytS" FT /note="PFAM: histidine kinase internal region" FT /note="SPTR: A1FWN7 Signal transduction histidine kinase, LytS. Stenotrophomonas maltophilia R551-3." FT /note="KEGG: sru:SRU_0415 putative transmembrane sensor histidine kinase transcription regulator protein " FT /note="COGs: COG3275 Putative regulator of cell autolysis category=T" FT /note="InterPro IPR010559" FT /codon_start=1 FT /transl_table=11 FT /colour=15 FT /translation=" FT MLRDSTRSALIDAAFWAGYCAFNLSMSAAFGRVTSGAVVIAVALAAELWLAGRLMRGIAHRRHWFELGPLRLAVRLFACV FT VIGAALSQLLLVPPLWIAAKGNWIYLGPDNLAGFAWPMLLMYWAQTAMALALWTALWSWTVAMRRYREGEIARLNAESLR FT NASELDALRARLNPHFVFNALNNLRALINEDTERARELVTRLSSTLRHALDHSQREHVSVAEELAVVDDYLAVESVHYED FT RLRVTREIDPAALELRLPPMALQLLVENAIKHGIARTPGGGELSLRVRGDGGRLRIEVGNPGRIEPESVRRGVGLAYLRT FT RLAHASPPGAFELCQHGARVSAQLEISQ* FT " FT gene complement(1986..2762) FT /locus_tag="DeVSDRAFT_0134" FT /colour=11 FT CDS complement(1986..2762) FT /locus_tag="DeVSDRAFT_0134" FT /product="alpha/beta hydrolase fold" FT /note="PFAM: alpha/beta hydrolase fold" FT /note="SPTR: A1ZDG2 Hydrolase, alpha/beta hydrolase fold family, putative. Microscilla marina ATCC 23134." FT /note="KEGG: ccr:CC2230 hydrolase, alpha/beta hydrolase fold family " FT /note="COGs: COG0596 hydrolases or acyltransferases (alpha/beta hydrolase superfamily) category=R" FT /note="InterPro IPR000073" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT VLMIPGLNSGADTWRETCAALQADKVQCHIVQFPGLAGAPPIKTAAYNDAMRDELLAYIEQRKLVRPVVIGHSLGGFVAL FT KMGIAKPQAIDKLVIVDTLGFLGSLYGPSLTAETIRPMAEGMRAIVLNQPQAHYFRGIAVTAQGMTASDDKVALLRRWGE FT ASDRATTAQALVEMMTTDLRPELDKVKAPTLVLAGWVGGARYGATRESTLAMYKQHYAKLDGVRIEMSQDGYHFLMWDDP FT QWLQDQVRGFLAEPKPAG* FT " FT gene complement(3042..3725) FT /locus_tag="DeVSDRAFT_0135" FT /colour=11 FT CDS complement(3042..3725) FT /locus_tag="DeVSDRAFT_0135" FT /product="GCN5-related N-acetyltransferase" FT /note="PFAM: GCN5-related N-acetyltransferase" FT /note="SPTR: Q82NK7 Putative acetyltransferase. Streptomyces avermitilis." FT /note="KEGG: sma:SAV1296 acetyltransferase " FT /note="COGs: COG3393 acetyltransferase category=R" FT /note="InterPro IPR000182" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT MSEDALDNPIWASLRSRHRALALGEGAVARYPAQVAPFLGVAADADIDDATLRALVPAGDTALGLGRAPALGAGWELRPV FT ADLAQMICRAPVPAVAGEAPIVELGADRREDVLALTALVYPHYFRPRTMELGRYFGLYEDGRLAAMAGERMGMEGYTELS FT AICTHPDFLGRGHARRLLAFLANDNHARGRIPFLHVSHENPRAVELYLRNGFELRRDIAFWSLRQAG* FT " FT gene 3886..4710 FT /locus_tag="DeVSDRAFT_0136" FT /colour=10 FT CDS 3886..4710 FT /locus_tag="DeVSDRAFT_0136" FT /product="5,10-methylenetetrahydrofolate reductase" FT /EC_number="1.7.99.5" FT /note="TIGRFAM: 5,10-methylenetetrahydrofolate reductase" FT /note="PFAM: methylenetetrahydrofolate reductase" FT /note="SPTR: A1FWN6 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20). Stenotrophomonas maltophilia R551-3." FT /note="KEGG: xft:PD0413 5,10-methylenetetrahydrofolate reductase " FT /note="COGs: COG0685 5 10-methylenetetrahydrofolate reductase category=E" FT /note="InterPro IPR003171:IPR004620" FT /codon_start=1 FT /transl_table=11 FT /colour=10 FT /translation=" FT MLPISFEFYPPKTDEQRSQLDKTAAKLRAFAPSYVSCTFGAGGSTLSYTPETIRRLRQKHALDAAPHLSCVGGTRSEIRE FT LLALYREIGCRRLVTLRGDLPSGMASAGDLRYANELVEFIRAETGDHFHIEVAAYPETHPQARDALSDLENFKRKVRAGA FT DGAITQYFYNPDAYFRFVDDVRAAGIDIPIVPGIMPIANFSQLRRFSELCGAEIPRWIAQRMHAYGDDADSIREFGAEVV FT AQLCSRLIEGGAPGLHFYTLNLAKPTLSVLARIA* FT " FT misc_feature complement(order(1478..1543,1604..1669,1733..1798)) FT /colour=11 FT /locus_tag="DeVSDRAFT_0133" FT /note="3 probable transmembrane helices predicted by FT TMHMM2.0" SQ Sequence 5020 BP; 792 A; 1821 C; 1681 G; 725 T; 1 other; CGCACGGCAA TCGCCAAGCA AAAACGGACG CCTCGCAGCG TCGTTTCTAT CCAGCCGACA 60 TCGGCGCATC GCTCCGACAG TCACCGAGGA CCGCCGCGAA GCCTTGCCTA CAGCGACAAC 120 CGCTCGCGCA ACTCCCGCGA CTGCCGCCGC GACACCTCGA CCCGACTGCC GTCCTTGAGC 180 TCGAGCTCGT AGCCGTCGCC CACCGCCAGT TCCACCGACT TCACCGAGCG CAGGTTGACC 240 AGGGTGTTGC GGTTGGCGCG GAAGAACAGC GATGGGTCCA GGCGCGCTTC CAGAGCGCTG 300 AGGCTGCGCG CCAGCAACGC GCATTCGTTG CGGAACCAGA CCCGCGCGTA GTTGCCGTCG 360 ACTACGATGC GGTGGACTTC GCGCAAGGCC ACGAACCAGC AGCGCTCGCC GTCGCGCAGG 420 AACACCTGGT CGTCGGCGCC GAGCGGGCCG CGCGGCTCGC TCGGCGCGGT CTCGCTGGGC 480 AGTCGCTGGC GCGCGCGTTG CAGCGCCGCG GCCAAGCGCC CGGGTTCGAC CGGCTTGACC 540 AGATAGTCCA GCGCGTTGGC TTCGAAGGCC TGCACCGCGT ATTGGTCGTA GGCCGTGGTG 600 AACACCACCA GCGGCGCGCT GTCGAGCCCG GCGATGACGT CGAAGCCGCT GCCCGAAGGC 660 ATCTGGATGT CGAGCAGAAC CAGATCCGGA CGCAAGCGCG CGATCGCTTC CTGCGCCTGC 720 GGCACGTCCT CGGCCTCGCC CAGCACCTCG ACCTGCGGCG ATTGCGCCAG CAAGGTGCGA 780 AGTTCCTGCC GCGCCAGCCG GGTGTCGTCG ACGATCAGCA CGCTCAACGG GCGCAGGTTC 840 ATTGCGAAAT CTCCAACTGC GCCGACACCC GCGCGCCGTG CTGGCACAGT TCGAACGCGC 900 CCGGCGGCGA GGCATGGGCC AGGCGCGTGC GCAGGTAGGC CAGGCCGACG CCGCGGCGCA 960 CCGATTCGGG CTCGATCCGG CCGGGGTTGC CGACTTCGAT CCGCAACCGC CCGCCGTCGC 1020 CGCGCACGCG CAGGCTCAGC TCGCCGCCGC CGGGGGTGCG GGCGATGCCG TGCTTGATCG 1080 CGTTCTCCAC CAGCAGTTGC AGCGCCATCG GCGGCAAGCG CAGCTCCAGC GCGGCCGGGT 1140 CGATCTCGCG CGTCACCCGC AGCCGGTCTT CGTAATGCAC CGATTCGACT GCGAGGTAAT 1200 CGTCGACCAC AGCCAACTCC TCGGCCACGC TGACGTGTTC GCGCTGGCTG TGGTCGAGCG 1260 CGTGGCGCAG GGTCGAAGAC AGCCGCGTGA CCAGTTCGCG CGCGCGCTCG GTGTCTTCGT 1320 TGATCAGCGC GCGCAGGTTG TTGAGCGCGT TGAACACGAA ATGCGGGTTC AGCCGCGCGC 1380 GCAGCGCGTC CAGCTCGGAG GCGTTGCGCA GCGATTCGGC GTTGAGCCGG GCGATCTCGC 1440 CCTCGCGGTA GCGGCGCATC GCCACCGTCC AGCTCCACAG CGCGGTCCAC AACGCCAGCG 1500 CCATCGCCGT CTGCGCCCAG TACATCAGCA GCATCGGCCA GGCGAAGCCG GCGAGGTTGT 1560 CCGGCCCCAG GTAGATCCAG TTGCCCTTGG CCGCGATCCA TAGCGGAGGA ACCAGCAGCA 1620 ATTGCGACAG CGCTGCGCCG ATCACCACGC AAGCGAACAG GCGAACGGCC AGCCGCAGCG 1680 GCCCCAGTTC GAACCAATGG CGGCGGTGGG CGATGCCGCG CATCAGCCGG CCGGCGAGCC 1740 ACAACTCCGC CGCCAGCGCG ACTGCGATCA CCACCGCGCC GGACGTGACC CGGCCGAACG 1800 CCGCCGACAT GCTCAGATTG AAGGCGCAGT AGCCCGCCCA GAACGCAGCG TCGATCAAGG 1860 CCGAACGGGT CGAGTCTCGC AACATGGATC GCTTCGGAGT CGGGGTCGGA ACGGGTGGAG 1920 GAAAGGGCCG CCGGGCCGCG GCGCGGCGGT CGCGTCATGC GATCCGCCGC TCGGTGCATA 1980 CAGGTTCAAC CGGCGGGCTT GGGCTCGGCC AGGAAACCGC GCACCTGATC CTGCAGCCAC 2040 TGCGGATCGT CCCACATCAG GAAATGGTAA CCGTCCTGGC TCATCTCGAT GCGCACGCCG 2100 TCGAGCTTGG CGTAGTGCTG CTTGTACATC GCCAAGGTCG ACTCGCGGGT GGCGCCGTAG 2160 CGGGCGCCGC CGACCCAGCC GGCCAGCACC AGGGTCGGCG CCTTGACCTT GTCCAGCTCC 2220 GGGCGCAGGT CGGTGGTCAT CATCTCCACC AGCGCCTGCG CGGTGGTGGC GCGGTCGCTG 2280 GCCTCGCCCC AACGGCGCAG CAGCGCGACC TTGTCGTCGC TGGCGGTCAT GCCCTGCGCG 2340 GTGACGGCGA TGCCGCGGAA GTAATGCGCC TGCGGCTGGT TCAGCACGAT CGCGCGCATG 2400 CCCTCGGCCA TCGGTCGGAT CGTTTCCGCG GTCAAGCTCG GGCCGTACAA CGAGCCGAGG 2460 AAGCCCAGCG TGTCGACGAT GACCAGCTTG TCGATCGCCT GCGGCTTGGC GATGCCCATC 2520 TTCAGCGCGA CGAAACCGCC GAGGCTGTGG CCGATCACCA CCGGACGCAC CAGCTTGCGC 2580 TGCTCGATAT AGGCCAGCAG CTCGTCGCGC ATGGCGTCGT TGTAGGCCGC GGTCTTGATC 2640 GGCGGCGCGC CGGCCAGGCC GGGGAACTGG ACGATGTGGC ACTGCACCTT GTCGGCCTGC 2700 AGCGCGGCGC AGGTCTCGCG CCAGGTGTCG GCGCCGGAAT TGAGGCCGGG GATCATCAGC 2760 ACCGGCCGGC CCTGGCCGAC GACTTCGATG CTCAGATCCC TGAAGCGCTC CGTGGCTGCC 2820 TGCGGCGGCG CGGGCGGCGA ACAGCGCGGT CAAGGCGAAG ACGATGCGGC GCAGGGCAAT 2880 GGCAGGGCGG GATTGCGGCA TGACGGATTC CTCGGGGGGT GGGAATGGCG CCCCTTTGCC 2940 GGGCTCTCGC GCCGCCCTGG GAGATCCGTG AGCAATGGCG GCTTGGCCCG GCCGAACGGC 3000 GGCGGATTCG ACCGAGCGGC GCCCGCCGCG GCCCGCTGCG CTCAGCCCGC CTGCCGCAGC 3060 GACCAGAACG CAATATCGCG CCGCAATTCG AAGCCGTTGC GCAGGTACAG CTCGACCGCG 3120 CGCGGGTTCT CGTGGCTGAC GTGCAGGAAT GGGATGCGTC CGCGCGCATG GTTGTCGTTG 3180 GCCAGGAACG CCAGCAGCCG GCGCGCGTGG CCGCGGCCGA GGAAGTCCGG ATGGGTGCAG 3240 ATCGCGCTGA GCTCGGTGTA GCCCTCCATG CCCATGCGCT CGCCGGCCAT CGCCGCCAGC 3300 CGCCCGTCCT CGTACAGGCC GAAGTAACGG CCCAGTTCCA TCGTGCGCGG CCGGAAATAG 3360 TGCGGATAGA CCAGCGCGGT CAGCGCCAGC ACGTCCTCGC GCCGGTCCGC GCCGAGTTCG 3420 ACGATCGGCG CCTCGCCCGC TACTGCCGGC ACCGGCGCGC GGCAGATCAT CTGCGCCAGA 3480 TCGGCGACCG GGCGCAGCTC CCAGCCGGCG CCGAGCGCCG GCGCGCGGCC GAGCCCCAGC 3540 GCGGTGTCGC CCGCCGGCAC CAGCGCCCGC AGCGTGGCGT CGTCGATGTC AGCGTCCGCG 3600 GCCACGCCCA GGAACGGCGC CACCTGCGCC GGATAGCGCG CCACCGCGCC CTCGCCCAGC 3660 GCCAGCGCGC GGTGGCGGCT GCGCAGCGAG GCCCAGATCG GATTGTCGAG TGCGTCTTCG 3720 CTCATGCCGG CCGCCTGAAA GGACTGCTTG CAGGGATGGC GCCGCGGCCG CGCCGAGTCA 3780 AGCGGCCGCG CCGTGCGACT TTGGTCCTAG CCCCGCTCGG GCGATATTCC ATTCCATCGC 3840 GATAAAGAGA TATTATCCCC CGAACCCCTC GCCACGGCCC CGCCCATGCT GCCGATCAGC 3900 TTCGAGTTCT ACCCGCCCAA GACCGACGAG CAGCGCAGCC AGCTCGACAA GACCGCGGCG 3960 AAGCTGCGCG CGTTCGCGCC GAGCTATGTC TCGTGCACCT TCGGCGCCGG CGGCTCGACC 4020 CTGAGCTACA CCCCCGAGAC CATCCGCCGC CTGCGCCAGA AGCACGCGCT CGACGCCGCC 4080 CCGCACCTGT CCTGCGTCGG CGGCACCCGC AGCGAAATCC GCGAGTTGCT GGCGCTGTAC 4140 CGCGAGATCG GCTGCCGCCG CCTGGTCACC CTGCGCGGCG ACCTGCCCTC GGGCATGGCC 4200 AGCGCCGGCG ACCTGCGCTA CGCCAACGAA CTGGTCGAAT TCATCCGCGC CGAAACCGGC 4260 GACCACTTCC ACATCGAAGT GGCGGCGTAT CCGGAGACCC ATCCGCAGGC GCGCGATGCG 4320 CTGTCGGACC TGGAGAACTT CAAGCGCAAG GTCCGCGCCG GCGCCGACGG CGCGATCACC 4380 CAGTATTTCT ACAACCCCGA CGCCTACTTC CGTTTCGTCG ACGACGTGCG CGCCGCCGGC 4440 ATCGACATCC CGATCGTGCC GGGCATCATG CCGATCGCCA ATTTCAGCCA GCTGCGCCGC 4500 TTCTCCGAGC TGTGCGGCGC CGAGATCCCG CGCTGGATCG CCCAGCGCAT GCACGCCTAC 4560 GGCGACGACG CTGACAGCAT CCGCGAGTTC GGCGCCGAGG TCGTGGCCCA GCTGTGCAGC 4620 CGGCTGATCG AAGGCGGCGC GCCGGGGCTG CACTTCTACA CCCTCAACCT CGCCAAGCCG 4680 ACCTTGTCGG TGCTCGCGCG CATCGCCTGA GCAGCCTGTG GGAGGGACTT CAATCCCGAC 4740 GCGCTTGTTC CTGATCGCCG CGGTCTGAGC GAAGAGCGTC GGGGCTGAAG CCCCTCCCAC 4800 ACATCCGCCG CAGGCGCGAA AACGCGGCTT CGCCGCCGCG TTCACCCTGC TGAAGCGAAA 4860 CGACGCAACT CACAAAAACG CGCAGCGCCG CGCCGCGGCA ATGGCGAACT GCACGCGCAG 4920 TTCTCAGCTT GCGCTTGCCT TGCGACAAGT TCGGTCTTGA GCCGCGCGAC CGCGTGCGCG 4980 CCCACTGGCG TCAGGATGCA TCGNCAAGAC GAGCGATGCC 5020 // ID Contig1265 standard; DNA; UNC; 2371 BP. XX DE Contig1265.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..2371 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene complement(71..1408) FT /locus_tag="DeVSDRAFT_0137" FT /colour=15 FT CDS complement(71..1408) FT /locus_tag="DeVSDRAFT_0137" FT /product="integral membrane sensor signal transduction histidine kinase" FT /note="PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein" FT /note="SPTR: Q3BQ68 Two-component system sensor protein. Xanthomonas campestris pv. vesicatoria (strain 85-10)." FT /note="KEGG: xcv:XCV3364 two-component system sensor protein " FT /note="COGs: COG0642 Signal transduction histidine kinase category=T" FT /note="InterPro IPR003594:IPR003660:IPR003661:IPR004358:IPR005467" FT /codon_start=1 FT /transl_table=11 FT /colour=15 FT /translation=" FT VASSDPSAARLKKRKRFRRRLRSRIILSFVLLGFGLTTMFAFATNWTRTRVENQLVEDVMNRNIEKTAQQFELDPSNTQT FT AFDQVRGFVYTPDKFESVRINRPEWYDLKDGIVTMNGTGEDGRPFAYKLAVRKTPKAWFFMAYDITPSARSEAQFNRALY FT LSVLVFTLFSLLVGWWAASRVMSPVSELALRIKRSGRSAQSEALASHFPDDEVGQLAEALDDYAVRLTNVVQRDREFNAD FT VSHELRTPLAVIKGAVELLLSRPDVEDKTRNRLLRIQRAEQQCTDLISALLLLSRNERGHGSTDIAKLSEQLLDAHRAQL FT GSKNLALSVEGERGLVVDAPEAAVAVALGNLIGNAVKYTTEGGVVVRLLASSVEVIDSGPGLSAEDAAKLFERGYRGTHA FT GHSQGGGIGLSIVRRLCDLYGWDVRVKPGDVRGVVATLTFSRPAA* FT " FT gene complement(1412..2092) FT /locus_tag="DeVSDRAFT_0138" FT /colour=6 FT CDS complement(1412..2092) FT /locus_tag="DeVSDRAFT_0138" FT /product="two component transcriptional regulator, winged helix family" FT /note="PFAM: response regulator receiver; transcriptional regulator domain protein" FT /note="SPTR: Q4UXV4 Two-component system regulatory protein. Xanthomonas campestris pv. campestris (strain 8004)." FT /note="KEGG: xac:XAC3250 two-component system regulatory protein " FT /note="COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain category=K" FT /note="InterPro IPR001789:IPR001867" FT /codon_start=1 FT /transl_table=11 FT /colour=6 FT /translation=" FT MRILVIEDNQDIAANLGDFLEDRGHTVDFAADGITGLHLAVVHDFDAIVLDLNLPGIDGLEVCRKLRNEARKQTPVLMLT FT ARDSLDNKLAGFDSGADDYLIKPFALQEVEVRLNALSRRGRGVQTRVLNAADLEYNLDTLEVRRQGKLLQLNPTALKILQ FT ALMEASPAVVTRQELETRVWGEELPDSDSLRVHIHGLRAVVDKPFDTPLIQTRHGIGYRIAAPENG* FT " FT misc_feature complement(1280..1345) FT /colour=11 FT /locus_tag="DeVSDRAFT_0137" FT /note="1 probable transmembrane helix predicted by FT TMHMM2.0" FT sig_peptide complement(1277..1408) FT /colour=11 FT /locus_tag="DeVSDRAFT_0137" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 0.994) with cleavage site probability 0.798 at FT residue 44" SQ Sequence 2371 BP; 373 A; 811 C; 805 G; 381 T; 1 other; GCTGCAGGCA CTCTAGAGGA TGCGTGGAAG CGGAAGTCCC CACGCCCACC GAAGCGCTAC 60 GCAGCGGCGA TCACGCCGCC GGCCGCGAGA ACGTCAACGT CGCCACCACC CCGCGCACGT 120 CGCCCGGCTT GACCCGCACG TCCCAGCCGT ACAGATCGCA CAGGCGCCGC ACGATCGACA 180 GGCCGATGCC GCCGCCCTGC GAGTGCCCGG CGTGGGTGCC GCGATAACCG CGTTCGAACA 240 GCTTGGCCGC GTCTTCCGCG CTCAGGCCCG GGCCGGAATC GATCACTTCG ACCGAACTCG 300 CCAGCAGCCG CACGACTACG CCGCCCTCGG TGGTGTACTT GACCGCGTTG CCGATCAGGT 360 TGCCCAGCGC CACCGCCACC GCCGCTTCCG GCGCGTCCAC CACCAGGCCG CGCTCGCCTT 420 CCACGCTCAG CGCCAGGTTC TTGCTGCCCA ACTGCGCGCG GTGCGCGTCG AGCAGTTGTT 480 CCGACAGCTT GGCGATGTCG GTGGAGCCGT GCCCGCGCTC GTTGCGCGAG AGCAGCAGCA 540 GCGCGCTGAT GAGGTCGGTG CACTGTTGCT CGGCGCGCTG GATCCGCAAC AATCGGTTGC 600 GAGTCTTGTC CTCCACGTCC GGCCGCGACA GCAGCAGCTC GACCGCGCCC TTGATCACCG 660 CCAGCGGCGT GCGCAGTTCG TGGCTGACGT CGGCGTTGAA CTCGCGGTCG CGCTGGACCA 720 CGTTGGTCAG GCGCACCGCG TAATCGTCCA GCGCCTCGGC CAGCTGGCCG ACTTCGTCGT 780 CGGGGAAGTG CGAGGCCAGC GCCTCGGACT GGGCGCTGCG CCCGGAGCGC TTGATCCGCA 840 GCGCCAGCTC CGACACCGGG CTCATGACCC GCGAAGCCGC CCACCAGCCC ACCAGCAGCG 900 AGAACAGGGT GAACACCAGC ACCGACAGAT ACAGCGCGCG GTTGAACTGG GCCTCGCTGC 960 GCGCCGAGGG CGTGATGTCG TAGGCCATGA AGAACCAGGC CTTCGGCGTC TTGCGCACCG 1020 CCAGCTTGTA GGCGAACGGC CGGCCGTCCT CGCCGGTGCC GTTCATGGTG ACGATGCCGT 1080 CCTTGAGGTC GTACCACTCC GGCCGGTTGA TCCGCACCGA CTCGAACTTG TCCGGGGTGT 1140 AGACGAAACC GCGCACCTGA TCGAACGCGG TCTGGGTATT GCTCGGATCC AGCTCGAACT 1200 GCTGCGCGGT CTTCTCGATG TTGCGGTTCA TCACATCCTC CACCAACTGG TTCTCCACCC 1260 GCGTGCGGGT CCAGTTGGTG GCGAAGGCGA ACATCGTGGT CAGCCCGAAC CCGAGCAGCA 1320 CGAACGACAG GATGATGCGG CTGCGCAAGC GCCGCCGAAA GCGCTTCCGT TTTTTCAGCC 1380 GCGCTGCGGA AGGGTCGGAC GAGGCCACGC GTCAGCCGTT TTCGGGGGCC GCGATGCGGT 1440 AGCCGATGCC GTGGCGGGTC TGGATCAACG GCGTGTCGAA CGGCTTGTCG ACCACCGCGC 1500 GCAGGCCGTG GATGTGCACG CGCAGGCTGT CGGAATCCGG CAGCTCCTCG CCCCACACCC 1560 GCGTCTCCAG CTCCTGCCGG GTGACCACCG CCGGCGAGGC TTCCATCAGC GCCTGCAGGA 1620 TCTTCAGCGC GGTCGGGTTG AGCTGCAGCA GCTTGCCCTG GCGGCGCACC TCGAGCGTGT 1680 CGAGGTTGTA TTCCAGGTCG GCGGCGTTGA GCACCCGGGT CTGCACGCCG CGGCCGCGCC 1740 GCGACAGCGC GTTGAGGCGC ACTTCCACTT CCTGCAGGGC GAAGGGCTTG ATCAGGTAGT 1800 CGTCGGCGCC GGAGTCGAAG CCGGCGAGCT TGTTGTCGAG GCTGTCGCGC GCGGTGAGCA 1860 TCAGCACCGG CGTCTGCTTG CGCGCTTCGT TGCGCAGCTT GCGGCACACC TCCAGGCCGT 1920 CGATGCCGGG CAGGTTCAAG TCGAGCACGA TGGCGTCGAA GTCGTGCACC ACGGCCAGGT 1980 GCAGGCCGGT GATGCCGTCG GCGGCGAAGT CGACGGTGTG GCCGCGGTCT TCGAGAAAGT 2040 CGCCGAGGTT GGCGGCGATG TCTTGGTTGT CTTCGATTAC GAGGATGCGC ATGGGCTCGT 2100 CCCAGTGGGG TTGGCGGTAC GACCATCGGC CGCGCGCCCG GGTTCCTGAG GCGTCGCACG 2160 CGAAGCGGCG ACGGCAGGCG GAGGATTCTG CCAGAGCGTT TGTAAAATGA ACGGGAAACG 2220 GACGGCTGCG CAAGCAGGCG CGCTTGCCGC GACGGGCGAA TGGGCCAGAA GTCACGCCTC 2280 CGCCCCGCTG CGCCGGACCT GCGCAGAACC CCTGAAAAAC AAAGGCCCAG ACGCGGGGCC 2340 ACCGCGCCTG GGCCAAAAGN GTGTGCCCCG A 2371 // ID Contig1272 standard; DNA; UNC; 4222 BP. XX DE Contig1272.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..4222 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene complement(29..1864) FT /locus_tag="DeVSDRAFT_0139" FT /colour=12 FT CDS complement(29..1864) FT /locus_tag="DeVSDRAFT_0139" FT /product="thiamine biosynthesis protein ThiC" FT /note="PFAM: thiamine biosynthesis protein ThiC" FT /note="SPTR: Q5H4C0 Thiamine biosynthesis protein thiC. Xanthomonas oryzae pv. oryzae." FT /note="KEGG: xom:XOO_0867 thiamine biosynthesis protein ThiC " FT /note="COGs: COG0422 Thiamine biosynthesis protein ThiC category=H" FT /note="InterPro IPR002817" FT /codon_start=1 FT /transl_table=11 FT /colour=12 FT /translation=" FT LSADVTRPIPGSRKIHVQGSRPDLHVPMREIALDRTPTIFGGEDNAPLPVYDTSGAYTDADANIDLAAGLAPLRANWIAE FT RGDTELLQRLSSDFGRQREHDPKLAHVRFGNRPLPRRAAAGANVTQMHYARRGIVTPEMEYIAIRENQRLESIREAHLLS FT QHPGQSFGANIQKIITPEFVREEVARGRAIIPNNINHPESEPMIIGRNFLTKVNANIGNSAVSSGIAEEVEKLVWSIRWG FT ADTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVDGRAEELNWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPL FT TAKRVTGIVSRGGSILAKWCLAHHKENFLYTHFEEICEIMKAYDVAFSLGDGLRPGSIADANDAAQFGELETLGELTQIA FT WKHDVQTMIEGPGHVPMQLIKENMDKQLEVCGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWYGTAMLCYVTPKEHLG FT LPNKHDVREGLMAYKIAAHAADLAKGHPGAQARDNAMSKARFEFRWEDQFNLGLDPERAREYHDETLPKQAHKVAHFCSM FT CGPHFCSMKITQDVRDYAKEHGLDEGAAVSEGMAEKSAEFRAQGAEVYHRA* FT " FT gene 2220..2861 FT /locus_tag="DeVSDRAFT_0140" FT /colour=13 FT CDS 2220..2861 FT /locus_tag="DeVSDRAFT_0140" FT /product="conserved hypothetical protein" FT /note="SPTR: Q8P6D8 Hypothetical protein XCC3032. Xanthomonas campestris pv. campestris." FT /note="KEGG: xcc:XCC3032 hypothetical protein " FT /note="InterPro IPR000437" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MNPIRPILRPLALLPLAAALLLGGCVLGHTVQPTPAAERAATDARAAALFERLRPLCGQAFAGRIVADTPRSADDPFIGK FT TLIMHVRGCEADTIRIPFQVGEDRSRTWVFDRRAGELRFKHDHRHRDGSEDELTMYGGDLKPRGEGDRYEFPADPQSRAL FT FRRLGREVSVPNVWAVQIDGQRFVYELARPGRLFRIEFDLTRPVPAPPPPWGG* FT " FT gene complement(2889..4133) FT /locus_tag="DeVSDRAFT_0141" FT /colour=11 FT CDS complement(2889..4133) FT /locus_tag="DeVSDRAFT_0141" FT /product="Beta-lytic metalloendopeptidase" FT /EC_number="3.4.24.32" FT /note="PRIAM: Beta-lytic metalloendopeptidase" FT /note="SPTR: Q8RQS6 Beta-lytic protease (EC 3.4.24.32). Lysobacter sp. IB-9374." FT /note="KEGG: hch:HCH_04347 membrane protein related to metalloendopeptidase " FT /note="COGs: COG0739 Membrane proteins related to metalloendopeptidases category=M" FT /note="InterPro IPR000841" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT MTNGRARQSHAPLAAAVPASRPQRRPPLFKRLSREQTMKKISKAGLGLALVCALATIGGNASAQGHGLSGEDLVYSYDEM FT FDFDIDAYLAKHAPHLHKHSEEISHWAGYSGISPKVLIALMEQQSGAVSAKRATNRPFGKLARADGFGAQTREVALALRE FT SLYERDPDGAKGPVTLARANPLQALFERSGDNEPAAALRGDGEFQLVYGRLFNEPRQAKAASDRFAKAGPDVQPLSPNGL FT LQFPFPRGASWHVGGAHTNTGSGNYPMSSLDMSRGGGWGSNQNGNWVSASAAGSFKRHSSCFAEIVHTGGWSTTYYHLMN FT IQYNTGANVSMNTAIANPANTQAQALCNGGQSTGPHEHWSLKQNGSFYHLNGTYLSGYRITATGSSYDTNCSRFYLTKNG FT QNYCYGYYVNPGPN* FT " FT misc_feature complement(3945..4001) FT /colour=11 FT /locus_tag="DeVSDRAFT_0141" FT /note="1 probable transmembrane helix predicted by FT TMHMM2.0" FT sig_peptide 2220..2360 FT /colour=11 FT /locus_tag="DeVSDRAFT_0140" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 1.000) with cleavage site probability 0.434 at FT residue 47" FT sig_peptide complement(3942..4133) FT /colour=11 FT /locus_tag="DeVSDRAFT_0141" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 0.997) with cleavage site probability 0.994 at FT residue 64" SQ Sequence 4222 BP; 601 A; 1430 C; 1466 G; 725 T; 0 other; GCTCCTACAG GGAGGCAACC CACAACGTTC AAGCGCGGTG GTAGACCTCG GCGCCCTGCG 60 CGCGGAACTC CGCCGACTTC TCGGCCATGC CCTCGCTCAC CGCCGCGCCC TCGTCCAGGC 120 CGTGTTCCTT GGCGTAGTCG CGCACGTCCT GGGTGATCTT CATCGAGCAG AAGTGCGGGC 180 CGCACATCGA GCAGAAGTGG GCGACCTTGT GCGCCTGCTT GGGCAGGGTC TCGTCGTGGT 240 ACTCGCGCGC CCGCTCCGGG TCCAGGCCGA GGTTGAACTG GTCTTCCCAG CGGAACTCGA 300 AGCGCGCCTT GCTCATCGCG TTGTCGCGCG CCTGCGCGCC CGGGTGGCCC TTCGCCAGGT 360 CGGCGGCATG CGCGGCGATC TTGTACGCCA TCAGGCCTTC GCGCACGTCG TGCTTGTTGG 420 GCAGGCCCAG GTGTTCCTTC GGCGTCACGT AGCACAGCAT CGCGGTGCCG TACCAGCCGA 480 TCATCGCCGC GCCGATCGCG CTGGTGATGT GGTCGTAGCC CGGCGCGATG TCGGTGGTCA 540 GCGGCCCCAG GGTGTAGAAC GGCGCCTCGC CGCACACCTC CAGCTGCTTG TCCATGTTTT 600 CCTTGATGAG CTGCATCGGC ACGTGGCCGG GGCCCTCGAT CATGGTCTGC ACATCGTGCT 660 TCCACGCGAT CTGGGTCAGC TCGCCCAGGG TTTCCAGCTC GCCGAACTGG GCCGCGTCAT 720 TGGCGTCGGC GATCGAGCCC GGACGCAGGC CGTCGCCGAG CGAGAAGGCC ACGTCGTAGG 780 CCTTCATGAT TTCGCAGATT TCCTCGAAGT GGGTGTAGAG GAAATTCTCC TTGTGGTGCG 840 CCAGGCACCA CTTGGCCAGG ATCGAGCCGC CGCGCGAGAC GATGCCGGTG ACGCGCTTGG 900 CGGTCAGCGG CACGTAACGC AGCAAGACGC CGGCGTGGAT GGTGAAGTAG TCCACGCCCT 960 GCTCGGCCTG CTCGATCAGG GTGTCGCGGA AGATCTCCCA GTTGAGCTCT TCGGCGCGGC 1020 CGTCGACCTT CTCCAGCGCC TGGTAGATCG GCACCGTGCC GATCGGCACC GGCGAGTTGC 1080 GGATGATCCA CTCGCGGGTT TCGTGGATGT GCTTGCCGGT GGACAGGTCC ATGACCGTGT 1140 CCGCGCCCCA GCGGATCGAC CACACCAGCT TCTCCACTTC CTCGGCGATG CCCGAGGACA 1200 CCGCCGAATT GCCGATGTTC GCATTGACCT TGGTCAGGAA GTTGCGGCCG ATGATCATCG 1260 GCTCGCTTTC CGGGTGGTTG ATGTTGTTGG GGATGATCGC GCGGCCGCGC GCGACTTCCT 1320 CGCGCACGAA TTCGGGCGTG ATGATCTTCT GGATGTTGGC GCCGAAGCTC TGGCCCGGAT 1380 GCTGGCTCAG CAGATGCGCT TCGCGGATCG ATTCCAGCCG CTGGTTCTCG CGGATGGCGA 1440 TGTATTCCAT CTCCGGGGTG ACGATGCCGC GGCGGGCGTA ATGCATCTGG GTGACGTTGG 1500 CGCCGGCAGC CGCGCGGCGC GGCAGCGGAC GGTTGCCGAA ACGCACGTGG GCGAGCTTGG 1560 GGTCGTGCTC GCGCTGGCGG CCGAAGTCCG AGGACAGGCG CTGCAGCAGT TCGGTGTCGC 1620 CGCGCTCGGC GATCCAGTTC GCACGCAGCG GCGCCAGGCC GGCGGCCAGG TCGATGTTGG 1680 CGTCGGCGTC GGTGTAGGCG CCGGAGGTGT CGTACACCGG CAGCGGCGCG TTGTCCTCGC 1740 CACCGAAGAT GGTCGGCGTG CGGTCGAGCG CGATCTCGCG CATCGGCACG TGCAGGTCCG 1800 GGCGCGAGCC CTGCACATGG ATCTTGCGCG AGCCGGGGAT CGGGCGGGTG ACGTCGGCCG 1860 ACAAACTTCT CGGCTTGCTG GATCAGCTCG GAGGGAACCG CGTTCATGGG AATTCGTCCG 1920 CTTTGGAGGG GAAGACCGCA CCATCGGGTG CGGCGCGGCG AGCCGGAGGG CTCGCACAAC 1980 GCGGGCGCGC GGACGCATCG ATCGCGTCCT GCGAAGCTTC CCTACGGCGG TCTCAACCGC 2040 ATCAGGTTCG AAGGGACTGT CTCAACCGGA CGGCCGGATC GGCCCGACGC GGTACCCCCG 2100 CTTCAAGTGC GCATTAGACC CGGAAACCGG CCCGGGCGCC AATCCCGCGG CGGCGACCGC 2160 GGCCACAGAC CGGCGCGGGC TGTCTTGCCG GCGTCGCGCG CGGCCGCTAG CGTGCGCGCA 2220 TGAACCCAAT CCGTCCGATC CTGCGCCCGC TCGCCCTGCT GCCCCTCGCC GCCGCCCTGC 2280 TGCTCGGCGG CTGCGTGCTC GGCCACACCG TGCAGCCCAC GCCCGCGGCC GAACGCGCCG 2340 CCACCGACGC GCGCGCGGCC GCGCTGTTCG AACGCCTGCG GCCGCTGTGC GGGCAGGCCT 2400 TCGCCGGGCG CATCGTCGCC GACACCCCGC GCAGCGCCGA CGACCCGTTC ATCGGCAAGA 2460 CCCTGATCAT GCACGTGCGC GGCTGCGAGG CCGACACGAT CCGCATCCCG TTCCAGGTCG 2520 GCGAAGACCG CTCGCGCACC TGGGTGTTCG ACCGCCGCGC CGGCGAACTG CGCTTCAAGC 2580 ACGACCACCG CCACCGCGAC GGCAGCGAGG ACGAGCTGAC CATGTACGGC GGCGACCTCA 2640 AGCCGCGCGG CGAAGGCGAT CGCTACGAAT TCCCGGCCGA TCCGCAAAGC CGCGCGCTGT 2700 TCCGGCGCCT GGGCCGCGAA GTCTCGGTGC CGAACGTGTG GGCGGTGCAG ATCGACGGAC 2760 AGCGCTTCGT CTACGAACTC GCCCGCCCGG GCCGTTTGTT CCGGATCGAA TTCGACCTGA 2820 CCCGGCCGGT GCCCGCGCCC CCGCCGCCGT GGGGCGGCTG AGGACGCGGG CAACCGACGC 2880 GGCGAGCCTC AGTTCGGGCC CGGGTTGACG TAATAGCCGT AGCAGTAGTT CTGGCCGTTC 2940 TTGGTCAGAT AGAACCGGCT GCAGTTGGTG TCATAGCTGC TGCCGGTGGC GGTGATGCGA 3000 TAGCCCGACA GATACGTGCC GTTGAGGTGG TAGAAGCTGC CGTTCTGCTT CAGCGACCAA 3060 TGCTCGTGCG GGCCGGTCGA CTGGCCGCCG TTGCACAGCG CCTGCGCCTG GGTGTTGGCC 3120 GGGTTGGCGA TGGCGGTGTT CATCGACACG TTGGCGCCGG TGTTGTACTG GATGTTCATC 3180 AGGTGGTAGT AGGTCGTCGA CCAGCCGCCG GTGTGCACGA TCTCGGCGAA GCACGAAGAG 3240 TGGCGCTTGA ACGAGCCCGC CGCCGACGCC GACACCCAGT TGCCGTTCTG GTTGCTGCCC 3300 CAGCCGCCGC CGCGCGACAT GTCCAGCGAC GACATCGGGT AATTGCCCGA GCCGGTGTTG 3360 GTATGCGCGC CGCCGACATG CCAGCTGGCG CCGCGCGGGA ACGGGAACTG CAGCAGGCCG 3420 TTGGGCGACA GCGGCTGCAC GTCCGGGCCG GCCTTGGCGA AGCGGTCCGA AGCCGCCTTG 3480 GCCTGGCGCG GTTCGTTGAA CAGGCGGCCG TAGACCAGCT GGAACTCGCC GTCGCCGCGC 3540 AGCGCGGCCG CCGGCTCGTT GTCGCCGGAA CGCTCGAACA GCGCCTGCAG CGGATTGGCG 3600 CGGGCCAGCG TCACCGGCCC CTTGGCGCCG TCGGGATCGC GCTCGTACAG CGACTCGCGC 3660 AGCGCCAGCG CGACCTCGCG GGTCTGCGCG CCGAAGCCGT CGGCGCGCGC CAGCTTGCCG 3720 AACGGACGAT TCGTCGCGCG CTTGGCGCTG ACCGCGCCGC TCTGCTGCTC CATCAGCGCG 3780 ATCAACACCT TCGGGCTGAT CCCGCTGTAG CCGGCCCAGT GCGAGATCTC TTCCGAGTGC 3840 TTGTGCAGAT GCGGCGCATG CTTGGCCAGA TACGCATCGA TGTCGAAGTC GAACATCTCG 3900 TCGTAGGAAT ACACCAGATC CTCGCCGCTG AGGCCGTGGC CCTGCGCGCT GGCGTTGCCG 3960 CCGATCGTCG CCAGCGCGCA CACCAGCGCC AGCCCCAGTC CCGCCTTGGA AATCTTCTTC 4020 ATGGTCTGCT CCCGAGAAAG ACGTTTGAAG AGTGGTGGAC GGCGCTGCGG CCGCGAAGCC 4080 GGAACCGCAG CGGCGAGCGG CGCATGCGAC TGACGCGCAC GACCGTTCGT CATCGGCGGA 4140 GCCCCGCGAT CGCTGTCCGT ATACCGCGGG CGGCCGGACT CTGACCGCGG GCGCGGACGC 4200 TGTCGTGCGA CGCAGTTCAA AT 4222 // ID Contig1276 standard; DNA; UNC; 2712 BP. XX DE Contig1276.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..2712 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene complement(393..911) FT /locus_tag="DeVSDRAFT_0142" FT /colour=6 FT CDS complement(393..911) FT /locus_tag="DeVSDRAFT_0142" FT /product="ATP-cone domain protein" FT /note="PFAM: ATP-cone domain protein" FT /note="SPTR: Q3BXI6 Transcriptional repressor nrdR. Xanthomonas campestris pv. vesicatoria (strain 85-10)." FT /note="KEGG: xac:XAC0744 ATP-cone domain protein " FT /note="COGs: COG1327 transcriptional regulator consists of a Zn-ribbon and ATP-cone domains category=K" FT /note="InterPro IPR003796:IPR005144" FT /codon_start=1 FT /transl_table=11 FT /colour=6 FT /translation=" FT MHCPFCQHHDTRVIDSRVSDDGATIRRRRVCEACGERFSTIETIELKLPVIIKGDGRREAFDARKLRAGFDRALQKRPVA FT EEQIEAAVRAVVHQLRMTAERELASRRVGEFVMAELRKLDHVGYVRFASVYRSFEDVADFREELDRLERDAPGDGQLPLL FT GEDDPRPDRKKR* FT " FT gene complement(964..1626) FT /locus_tag="DeVSDRAFT_0143" FT /colour=0 FT CDS complement(964..1626) FT /locus_tag="DeVSDRAFT_0143" FT /product="TonB family protein" FT /note="TIGRFAM: TonB family protein" FT /note="SPTR: A1G261 TonB family protein. Stenotrophomonas maltophilia R551-3." FT /note="COGs: COG0810 Periplasmic protein TonB links inner and outer membranes category=M" FT /note="InterPro IPR006260" FT /codon_start=1 FT /transl_table=11 FT /colour=0 FT /translation=" FT MAKPLLRSAALGWLACVSVHAAEAPPGGDSAAPVIEYKTLTPAEAKEAIVVAPPSPPSPSSRPDFSQDIGMTETYYIPAC FT QMGMQGGKYRASWREISDFHARNRVAWLSDHDRYGAPDWYAQPGSRAPEPDNRPDAAYPAAAGEKVGEVVVKVIIDAKGR FT TRDAIVICSNDTVFDAPALAFARKVAFKPALRDGRPVADYGNVSMRFYPDGPKYGFRRHK* FT " FT gene complement(1619..2710) FT /locus_tag="DeVSDRAFT_0144" FT /colour=10 FT CDS complement(1619..2710) FT /locus_tag="DeVSDRAFT_0144" FT /product="Glycine hydroxymethyltransferase" FT /EC_number="2.1.2.1" FT /note="PRIAM: Glycine hydroxymethyltransferase" FT /note="PFAM: glycine hydroxymethyltransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase" FT /note="SPTR: A1FZ12 Glycine hydroxymethyltransferase (EC 2.1.2.1). Stenotrophomonas maltophilia R551-3." FT /note="KEGG: xcb:XC_3544 serine hydroxymethyltransferase " FT /note="COGs: COG0112 Glycine/serine hydroxymethyltransferase category=E" FT /note="InterPro IPR001085:IPR001597" FT /codon_start=1 FT /transl_table=11 FT /colour=10 FT /translation=" FT GCEYVDIAEQLAIDRVKELYGADYANVQPHSGSQANQAVYFALLNPGDTILGMSLAHGGHLTHGAKVNASGKLFNAVQYG FT VNDQGLIDYDEVERLALEHKPKMVVAGFSAYSQVVDWARFRAIADKIGAYLFVDMAHVAGLIAAGVYPSPVPHAHVVTST FT THKTLRGPRGGIIVAKRWDGAVGEGEGAVGFDDMQKKLQSIVFPGIQGGPLMHVIAAKAVAFKEALQPQFKDYQAQVVKN FT AQAMAKTIIARGYKIVSGGTENHLMLVDMIGKGITGKDAEAALGRAHITVNKNAVPNDPQKPFVTSGLRIGTPAVTTRGY FT KEADCVALAEWICDVLDNPKDEKVIAGVRENVTKQCAQFPVYG* FT " FT sig_peptide complement(1561..1626) FT /colour=11 FT /locus_tag="DeVSDRAFT_0143" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 0.997) with cleavage site probability 0.861 at FT residue 22" SQ Sequence 2712 BP; 396 A; 925 C; 911 G; 480 T; 0 other; GAGACAGCGG CTTGGCCTGC GCGGGCGCCT GCGCGGTCAA CAGGATCTGA TCCGCGCCCA 60 CGTTCCAGCG CCCCGTCGCG GACTGGACCA TCGGGCCGTA GCGCAGGCTC CATTCGAAAC 120 GCCCGTCGGG CTTGAGCAGC AGTTCCGATT CGCCCTCGGA CGCGCCTTGC AGCGTGTAGC 180 GCCCCGCCAG CGGCGCGCGC TGCCGGTCCT CGATCGGATC GGCGGCCTGC GCCGATACCG 240 GCAGCGACGC CAACAGCAGG CTCAACAGCG CGGATCGGTA TGCAGTGGAC ATGCGCGAAC 300 TCCCTTCGGC GCGTGAATTC GGTGATTCCC GCCGGCGCCA GCGTTCCTGG CCTGCGTCCG 360 GCCTGCCGCG GGCGCGCGCC CGCAGCGAAA ACTCAGCGTT TTTTCCGGTC CGGACGCGGA 420 TCGTCCTCGC CCAGCAACGG CAACTGTCCA TCGCCGGGCG CATCGCGCTC GAGCCGGTCG 480 AGTTCCTCGC GGAAATCGGC CACGTCCTCG AACGAGCGGT ACACCGAGGC GAAGCGCACG 540 TAGCCGACGT GGTCGAGCTT GCGCAGCTCG GCCATGACGA ATTCGCCGAC CCGGCGCGAG 600 GCCAGTTCGC GCTCGGCGGT CATGCGCAGC TGGTGCACGA CCGCGCGCAC CGCCGCTTCG 660 ATCTGTTCTT CCGCCACCGG CCGCTTCTGC AGCGCGCGGT CGAAGCCGGC GCGCAGCTTG 720 CGCGCGTCGA ACGCTTCGCG GCGGCCGTCG CCCTTGATGA TGACCGGCAG CTTCAATTCG 780 ATCGTCTCGA TCGTGCTGAA GCGCTCGCCG CAGGCCTCGC ACACGCGCCG GCGGCGGATG 840 GTGGCGCCGT CGTCGGACAC GCGCGAGTCG ATCACGCGGG TGTCGTGGTG CTGGCAGAAC 900 GGGCAATGCA TCAATCCACC GTGAGTCGGG ACGAGAGTTG CGAATCGTAG CGTCCGCAAC 960 CGGTCATTTG TGCCGCCGGA ACCCGTATTT CGGCCCGTCC GGATAAAACC GCATGGACAC 1020 ATTGCCATAG TCCGCGACCG GCCGGCCATC GCGCAGCGCG GGCTTGAACG CGACTTTCCT 1080 GGCGAATGCG AGCGCGGGCG CGTCGAACAC GGTGTCGTTG CTGCAGATCA CGATGGCGTC 1140 GCGGGTACGC CCTTTGGCGT CGATGATGAC CTTCACCACG ACCTCGCCGA CCTTTTCGCC 1200 GGCCGCGGCG GGATACGCCG CGTCGGGACG ATTGTCGGGC TCCGGTGCGC GGCTTCCGGG 1260 TTGCGCATAC CAGTCCGGCG CCCCGTAGCG GTCGTGGTCG GACAACCACG CGACACGATT 1320 CCTGGCATGG AAATCCGAAA TTTCGCGCCA ACTGGCCCGG TACTTGCCTC CCTGCATGCC 1380 CATCTGGCAG GCCGGGATGT AGTAGGTCTC GGTCATGCCG ATGTCCTGGC TGAAGTCCGG 1440 CCGGCTCGAA GGCGACGGCG GCGACGGCGG CGCGACCACG ATCGCTTCCT TCGCCTCCGC 1500 CGGCGTCAGC GTCTTGTACT CGATGACGGG CGCGGCGGAA TCTCCGCCCG GCGGAGCTTC 1560 GGCGGCGTGC ACGCTGACGC ATGCAAGCCA ACCGAGCGCC GCCGATCGGA GCAGCGGTTT 1620 AGCCATACAC CGGGAACTGC GCGCACTGCT TGGTCACGTT CTCGCGCACG CCGGCGATGA 1680 CCTTCTCGTC CTTCGGGTTG TCGAGCACAT CGCAGATCCA CTCGGCCAGG GCCACGCAGT 1740 CGGCTTCCTT GTAGCCGCGG GTGGTGACGG CCGGGGTGCC GATGCGCAGG CCCGAGGTCA 1800 CGAACGGCTT CTGCGGGTCG TTGGGCACCG CGTTCTTGTT GACCGTGATG TGGGCGCGGC 1860 CGAGCGCGGC TTCCGCGTCC TTGCCGGTGA TGCCCTTGCC GATCATGTCG ACCAGCATCA 1920 GGTGGTTTTC GGTGCCGCCG GAGACGATCT TGTAGCCGCG CGCGATGATG GTCTTGGCCA 1980 TGGCCTGGGC GTTCTTGACC ACCTGCGCCT GATAATCCTT GAACTGCGGC TGCAGCGCTT 2040 CCTTGAACGC CACCGCCTTG GCTGCGATCA CGTGCATCAG CGGGCCGCCC TGGATGCCCG 2100 GGAAGACGAT GCTCTGCAGC TTCTTCTGCA TGTCGTCGAA ACCCACCGCA CCCTCGCCCT 2160 CGCCGACCGC GCCGTCCCAG CGCTTCGCTA CGATGATGCC GCCGCGCGGG CCGCGCAGGG 2220 TCTTGTGGGT GGTCGAGGTG ACCACGTGCG CGTGCGGCAC CGGGCTCGGG TAGACGCCGG 2280 CGGCGATCAG GCCGGCGACG TGGGCCATAT CGACGAACAG ATACGCGCCG ATCTTGTCGG 2340 CGATGGCGCG GAAGCGCGCC CAATCCACCA CCTGCGAGTA AGCGCTGAAG CCGGCCACGA 2400 CCATCTTCGG CTTGTGCTCC AGGGCCAGGC GCTCGACTTC GTCGTAATCG ATCAGGCCCT 2460 GGTCGTTGAC GCCGTACTGC ACGGCGTTGA ACAGCTTGCC CGAGGCGTTG ACCTTGGCGC 2520 CGTGGGTGAG GTGGCCGCCG TGGGCCAGGC TCATCCCTAA GATGGTGTCG CCCGGATTGA 2580 GCAGGGCGAA GTACACCGCC TGGTTGGCCT GCGAGCCCGA ATGCGGCTGC ACGTTGGCGT 2640 AGTCGGCGCC GTAGAGCTCC TTGACCCGGT CGATCGCCAG TTGCTCGGCG ATGTCGACGT 2700 ACTCGCAACC GC 2712 // ID Contig1283 standard; DNA; UNC; 4021 BP. XX DE Contig1283.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..4021 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene 2..529 FT /locus_tag="DeVSDRAFT_0153" FT /colour=11 FT CDS 2..529 FT /locus_tag="DeVSDRAFT_0153" FT /product="transglutaminase domain protein" FT /note="PFAM: transglutaminase domain protein" FT /note="SPTR: A1G0F1 Transglutaminase-like. Stenotrophomonas maltophilia R551-3." FT /note="KEGG: bfs:BF2762 putative lipoprotein " FT /note="COGs: COG1305 Transglutaminase-like enzymes putative cysteine proteases category=E" FT /note="InterPro IPR002931" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT EKNPYKIAQKLYAAVDAIPWAGAREYSTISNISDYALHAGHADCGQQTLLLMALLRLNGIPARWQSGWVYGDNGYTNMHD FT WAWMYLAPYGWLPVDVTTGRFDSPDPQLAGFYLGGLDAYRVAYNDDYGRQFVPAKRFDRSETVDSQRGEVEWEGGNLYFD FT QWDYDYHAQVLPTKD* FT " FT gene 574..3543 FT /locus_tag="DeVSDRAFT_0154" FT /colour=11 FT CDS 574..3543 FT /locus_tag="DeVSDRAFT_0154" FT /product="TonB-dependent receptor, plug" FT /note="PFAM: TonB-dependent receptor; TonB-dependent receptor, plug" FT /note="SPTR: A1G0F2 TonB-dependent receptor, plug precursor. Stenotrophomonas maltophilia R551-3." FT /note="KEGG: saz:Sama_3060 TonB-dependent receptor, plug " FT /note="COGs: COG1629 Outer membrane receptor proteins mostly Fe transport category=P" FT /note="InterPro IPR000531:IPR010917:IPR012910" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT MKGKSFRKSGLCVAMGICLASMALPALAANTDGSLAGRVAAGAEVTVRSADTGFTRTVKADAQGNYRFPFLPIGTYQLQA FT SKDGQAVGAPIQVVVSLGNEANVNLGGATDLAAVQVIGSRVITPVDVRSTESATNITKAELERVPIARDAQSVALLAPGV FT IQGQYGGASFGGSSVSENAVYINGLNVTDFYKRVGFSSVPFGFFKEFQVKTGGYSVEFGRTTGGVINAVTQSGTNEFKYG FT AELVWEPKSLQSGGDNHYDRSGDPFRIASRDKRDRTNLNVHASGPIVKDKLFFYAMYEFRDYRPESTNDAGSTFFKGKAD FT KGFWGTKLDWQINDSHLLEFLAFSDKNETTTDNYQYDFARGSRGAASNTQYSEVGGTNWALTYTGYLTENFSMKALYGEN FT KRDRIASSLNDQDCDAVQDRRVAGNPQIGCVSSALIENGADKREAARLDFEWQLGDHLLRFGLDREVNTSDNESFYPGPS FT RKFYQIYPTVPGTTLENGGVVPAGVNAYVRARQQEVTGTFETINSAYYIEDNWQVTPDLMLNGGVRVEAFNNKNGAGSTY FT IKIDDMIAPRLGFAWDFRGDGRAKVFGNIGRYFLPIVNQINVKQAGAFLDERTFYALQGLEAFQRNGATYYRPILGAQIG FT PIDNSQGDGTVQDQRSKVDGDIDPVYQDEVILGYQAMFGDAWSWGVRGIYRRLHNAIDDMEITSNGILCNGEPGGIGYVM FT GNPGKKVKLYTDTNCDGVKDGYVDIDTSRAGWALYDANGNYVGERGWVKPKRTYRALEFMLDRAWDDKWAFNASYTWSKS FT EGNVEGPSNSDFGFDNTGRTESFDDPFVNLNGDGPLPNDRRHQIKLRGAYAINDQWTVGATLNAQSGRPINAFGLGNPFD FT PTVYHSFYVCVANCTAKDFAQRTYELRQRGYGGRTPWTFDLGASLTYQRSFGGADLRVKLAVYNLLNQQRALEVDDSYET FT GVGVVNEFYRLGTGYQTPRYAQLTVSVDF* FT " FT sig_peptide 574..660 FT /colour=11 FT /locus_tag="DeVSDRAFT_0154" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 1.000) with cleavage site probability 0.918 at FT residue 29" SQ Sequence 4021 BP; 740 A; 1384 C; 1279 G; 618 T; 0 other; CGAGAAGAAC CCGTACAAGA TCGCGCAGAA GCTCTACGCC GCGGTCGATG CGATTCCGTG 60 GGCCGGCGCG CGCGAGTACT CGACGATCTC GAACATTTCC GACTACGCCC TGCACGCCGG 120 CCACGCCGAC TGCGGCCAGC AGACCCTGCT GCTGATGGCG CTGCTGCGCC TCAACGGCAT 180 CCCGGCGCGC TGGCAATCGG GCTGGGTGTA CGGCGACAAC GGCTACACCA ACATGCACGA 240 CTGGGCCTGG ATGTACCTGG CCCCTTACGG CTGGCTGCCG GTGGACGTCA CCACCGGCCG 300 CTTCGACTCG CCCGATCCGC AGCTGGCCGG CTTCTACCTC GGCGGCCTGG ACGCGTACCG 360 GGTGGCTTAC AACGACGACT ACGGCCGCCA GTTCGTTCCG GCCAAGCGGT TCGATCGTTC 420 CGAGACCGTG GATTCGCAAC GCGGCGAGGT CGAGTGGGAA GGGGGAAATC TCTACTTCGA 480 CCAGTGGGAC TACGACTACC ACGCGCAGGT GCTGCCGACG AAGGACTGAC CCGGCGCAGC 540 ACCGCTCATA CCTTTTGGGG AGGAAGTGCG GCAATGAAAG GCAAGAGCTT TCGCAAGTCC 600 GGTTTGTGCG TGGCGATGGG GATCTGCCTC GCATCGATGG CGCTGCCGGC ATTGGCGGCC 660 AATACCGACG GTTCGCTGGC CGGCCGCGTC GCCGCCGGCG CCGAGGTCAC CGTGCGCAGC 720 GCCGACACCG GCTTCACCCG CACGGTCAAG GCCGATGCCC AGGGCAATTA CCGCTTCCCG 780 TTCCTGCCGA TCGGCACCTA CCAGCTGCAG GCCAGCAAGG ACGGCCAGGC GGTCGGCGCG 840 CCGATCCAGG TCGTGGTGAG CCTGGGCAAC GAAGCCAACG TCAACCTCGG CGGCGCCACC 900 GATCTGGCCG CGGTGCAGGT GATCGGCTCG CGCGTGATCA CCCCGGTGGA CGTACGCTCG 960 ACCGAATCGG CCACCAACAT CACCAAGGCC GAACTCGAAC GCGTGCCGAT CGCGCGCGAC 1020 GCGCAATCGG TGGCGCTGCT GGCGCCGGGC GTGATCCAGG GCCAGTACGG CGGCGCCTCG 1080 TTCGGCGGCT CGTCGGTGTC GGAGAACGCG GTCTACATCA ACGGCCTCAA CGTCACCGAC 1140 TTCTACAAGC GGGTCGGCTT CTCCTCGGTG CCGTTCGGCT TCTTCAAGGA ATTCCAGGTC 1200 AAGACCGGCG GCTACTCGGT CGAGTTCGGC CGCACCACCG GCGGCGTCAT CAACGCCGTC 1260 ACCCAGTCGG GCACCAACGA GTTCAAATAC GGCGCCGAGC TGGTGTGGGA GCCCAAGTCG 1320 CTGCAATCGG GCGGCGACAA CCATTACGAC CGCAGCGGCG ACCCGTTCCG CATCGCCAGC 1380 CGCGACAAGC GCGACCGCAC CAACCTCAAC GTGCACGCCT CCGGGCCGAT CGTGAAGGAC 1440 AAGTTGTTCT TCTACGCGAT GTACGAGTTC CGCGACTATC GCCCGGAAAG CACCAACGAT 1500 GCGGGCAGCA CCTTCTTCAA GGGCAAGGCC GACAAGGGCT TCTGGGGCAC CAAGCTGGAC 1560 TGGCAGATCA ACGACAGCCA TCTGCTGGAG TTCCTGGCCT TCTCCGACAA GAACGAAACC 1620 ACCACCGACA ACTACCAGTA CGACTTCGCC CGCGGCAGCC GCGGCGCGGC CAGCAACACC 1680 CAGTACAGCG AGGTCGGCGG CACCAACTGG GCGCTGACCT ACACCGGCTA CCTGACCGAA 1740 AACTTCTCGA TGAAGGCGCT GTACGGCGAG AACAAGCGCG ACCGCATCGC CAGCAGCCTC 1800 AACGACCAGG ACTGCGACGC GGTGCAGGAC CGGCGCGTGG CCGGCAATCC GCAGATCGGC 1860 TGCGTGTCCT CGGCGCTGAT CGAAAACGGC GCCGACAAGC GCGAGGCCGC GCGCCTGGAC 1920 TTCGAATGGC AGCTCGGCGA CCACCTGCTG CGCTTCGGCC TGGACCGCGA GGTCAACACC 1980 TCCGACAACG AGAGCTTCTA TCCGGGCCCG TCGCGCAAGT TCTACCAGAT CTACCCGACC 2040 GTGCCCGGCA CCACGCTTGA GAACGGCGGC GTGGTCCCCG CCGGCGTCAA CGCCTACGTG 2100 CGCGCGCGCC AGCAGGAGGT CACCGGCACC TTCGAGACGA TCAACTCGGC CTACTACATC 2160 GAAGACAACT GGCAGGTCAC GCCCGACCTG ATGCTCAACG GCGGCGTGCG CGTGGAAGCG 2220 TTCAACAACA AGAACGGCGC CGGCAGCACC TACATCAAGA TCGACGACAT GATCGCCCCG 2280 CGCCTGGGCT TCGCCTGGGA CTTCCGCGGC GACGGCCGCG CCAAGGTGTT CGGCAACATC 2340 GGTCGCTACT TCCTGCCCAT CGTCAACCAG ATCAACGTCA AGCAAGCCGG CGCCTTCCTC 2400 GACGAGCGCA CGTTCTATGC GCTGCAGGGG CTGGAGGCGT TCCAGCGCAA TGGCGCGACC 2460 TATTACCGGC CGATCCTGGG CGCGCAGATC GGCCCGATCG ACAACAGCCA GGGCGACGGC 2520 ACCGTGCAGG ACCAACGCAG CAAGGTCGAC GGCGACATCG ATCCGGTCTA CCAGGACGAG 2580 GTGATCCTGG GCTACCAGGC GATGTTCGGC GATGCCTGGT CGTGGGGCGT GCGCGGCATC 2640 TACCGGCGCC TGCACAACGC GATCGACGAC ATGGAGATCA CCTCCAACGG CATCTTGTGC 2700 AACGGCGAGC CCGGCGGCAT CGGCTATGTG ATGGGCAACC CCGGCAAGAA GGTCAAGCTG 2760 TACACCGACA CCAACTGCGA CGGGGTCAAG GACGGCTACG TCGACATCGA CACCTCGCGC 2820 GCCGGCTGGG CGCTGTACGA CGCCAACGGC AACTACGTCG GCGAGCGCGG CTGGGTCAAG 2880 CCCAAGCGCA CCTATCGCGC GCTGGAGTTC ATGCTCGACC GCGCCTGGGA CGACAAGTGG 2940 GCGTTCAACG CCTCGTATAC CTGGTCCAAG AGCGAGGGCA ACGTGGAAGG CCCGTCGAAC 3000 TCGGACTTCG GCTTCGACAA CACCGGCCGC ACCGAGTCCT TCGACGATCC CTTCGTCAAC 3060 CTCAACGGCG ACGGCCCGCT GCCGAACGAC CGCCGCCACC AGATCAAGCT GCGTGGCGCC 3120 TATGCGATCA ACGACCAGTG GACGGTCGGC GCGACCTTGA ACGCGCAGTC CGGCCGGCCG 3180 ATCAACGCCT TCGGCCTGGG CAATCCGTTC GATCCGACCG TCTATCACAG CTTCTACGTG 3240 TGCGTGGCCA ACTGCACCGC CAAGGACTTC GCCCAGCGCA CCTACGAGCT GCGCCAGCGC 3300 GGTTATGGCG GGCGCACGCC GTGGACGTTC GACCTGGGCG CGAGCCTCAC TTACCAGCGC 3360 TCCTTCGGCG GCGCCGATCT GCGGGTCAAG CTGGCGGTCT ACAACCTGCT CAACCAGCAG 3420 CGCGCGCTGG AAGTGGACGA CTCTTACGAG ACCGGCGTTG GTGTGGTCAA CGAGTTCTAT 3480 CGCCTCGGTA CGGGCTACCA GACGCCGCGC TACGCGCAGC TGACGGTGTC GGTGGACTTC 3540 TGAGGCGATA CCGGGTGAAG CTCGCCGGCA TGACGCGCTT TCCCGCTTCG CCGGCACCGG 3600 CGGCTCCCGC ACGCGGGAGC CGCCATCGTT CTACCTCGAC AGGGCCCGTG CCGATGCGAC 3660 GCATCGGTCC GCTTTGCGCG GCCCTGTTCT TTTCTTCGTT GTTCGCCGCT GGAGCGGTAG 3720 CGGCGAGCCC CGTCGACGCG CGCAAGGCCG AGCTCGACCG TATCGTCGAT CAGGTGCAGG 3780 CGCGCTACCG CCTGCCGGGC CTGGCGCTGG CGGTGGTGGA AAATGGCGAA GTCGTCTACG 3840 CGCGCACCGA CGGTGAGCTG CTCGCCGGTT CCGGGCGCAA GGTCGGCGCC GACTCGCTGT 3900 TCAAGATCGC CTCCAACACC AAGTCGATGA CCACCGCGCT GCTGGCGCGG CTGGTCGACG 3960 CGGGCAAGCT GCGCTGGGAC GACCCGGTGA CGAAGTATTG CCGGATTTTC GCATGCACGA 4020 G 4021 // ID Contig1284 standard; DNA; UNC; 3069 BP. XX DE Contig1284.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..3069 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene 59..550 FT /locus_tag="DeVSDRAFT_0155" FT /colour=13 FT CDS 59..550 FT /locus_tag="DeVSDRAFT_0155" FT /product="hypothetical protein" FT /note="SPTR: A1G0F3 Beta-lactamase precursor. Stenotrophomonas maltophilia R551-3." FT /note="KEGG: xac:XAC2806 beta-lactamase " FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT VVLINGDAGDARSVFDQALTQRYTRPRSERGPAWYADAIEREAQAPAASRAPDTSARRPLAPDELRGKLGVYRDPWFGEV FT ALCARGGEVEFASRKSPLMSGKIVRVGPRLLVDWDAEEVDAEAWIDFAAAAEPAAFSMSKLDPDADFSYDYEDLAFARVG FT DCG* FT " FT gene 877..1305 FT /locus_tag="DeVSDRAFT_0156" FT /colour=9 FT CDS 877..1305 FT /locus_tag="DeVSDRAFT_0156" FT /product="peptidase M15D, vanX D-ala-D-ala dipeptidase" FT /note="PFAM: peptidase M15D, vanX D-ala-D-ala dipeptidase" FT /note="SPTR: Q8PFW3 D-alanyl-D-alanine dipeptidase. Xanthomonas axonopodis pv. citri." FT /note="KEGG: xac:XAC3859 D-alanyl-D-alanine dipeptidase " FT /note="COGs: COG2173 D-alanyl-D-alanine dipeptidase category=M" FT /note="InterPro IPR000755" FT /codon_start=1 FT /transl_table=11 FT /colour=9 FT /translation=" FT LRLRIYDCYRAVRAVRDFVAWAADPDDQKTKSGFYPTLDKSKLLGDYISPTSGHSRGATLDLTVLERRGEGYAPLDMGTG FT FDFFDELAHTESPRASLAQRGHRQRLRAAMQREGFENYPLEWWHYTFKPEPTPAVAFDFPVR* FT " FT gene 1419..2579 FT /locus_tag="DeVSDRAFT_0157" FT /colour=9 FT CDS 1419..2579 FT /locus_tag="DeVSDRAFT_0157" FT /product="beta-lactamase" FT /note="PFAM: beta-lactamase" FT /note="SPTR: A1FY06 Beta-lactamase precursor. Stenotrophomonas maltophilia R551-3." FT /note="KEGG: sus:Acid_2542 beta-lactamase " FT /note="COGs: COG1680 Beta-lactamase class C and other penicillin binding proteins category=V" FT /note="InterPro IPR000437:IPR000871:IPR001466" FT /codon_start=1 FT /transl_table=11 FT /colour=9 FT /translation=" FT MSGEKRAALPATVTTGLRGAGFAVVVACLGAAACAGTPSRAAGQGAADDAQAERAVDGLLADYRGRVPGASVLVLRDGRP FT LLRRGYGLAVLEDGIKATPQTNYRLASVSKQFTAAAVLLLAQDGKLGLDDPIRRWLPSLPKACDAITLRQILSHQSGLID FT YEDVMPASFDADAHQMHDSDVLAVLEGQDRTYFAPGSGYRYSNSGYSLLALVVAKASGRGFAEFLRERIFLPLGMRDTVA FT YERGVSNVAHRAYGYSYENGRWQRTDQSPTSATLGDGGIYSSIDDLAKWDAALYDQRLLSDASRALAFAAHTPTDAPDVG FT YGYGWRITGETLWHSGESMGFRNVIVRWPQRRLTVVVLSNRNDPEPYRMALKIRDLYLPGSPVRGH* FT " FT sig_peptide 1419..1544 FT /colour=11 FT /locus_tag="DeVSDRAFT_0157" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 0.994) with cleavage site probability 0.588 at FT residue 42" SQ Sequence 3069 BP; 453 A; 1052 C; 1079 G; 485 T; 0 other; ACGCTGATGG GCATGTACTC CCTGACCGCG CTGTTGCCCG AGCGCATAGG CCGGCTTCGT 60 GGTGCTGATC AACGGCGATG CCGGCGATGC GCGCAGCGTG TTCGACCAGG CGCTGACCCA 120 GCGCTACACG CGTCCGCGCA GCGAGCGCGG CCCGGCCTGG TACGCCGATG CGATCGAGCG 180 CGAAGCGCAG GCGCCGGCGG CGAGCCGCGC GCCGGACACC TCCGCGCGCC GGCCGCTCGC 240 GCCAGACGAG CTGCGCGGCA AGCTCGGCGT GTACCGCGAC CCGTGGTTCG GCGAGGTGGC 300 GCTGTGCGCG CGCGGCGGCG AAGTGGAATT CGCCTCGCGA AAGTCGCCGC TGATGAGCGG 360 TAAGATCGTC CGGGTCGGGC CGCGCCTGCT GGTCGACTGG GACGCGGAGG AGGTCGACGC 420 CGAGGCCTGG ATCGATTTCG CCGCTGCGGC CGAGCCAGCC GCCTTCAGCA TGAGCAAGCT 480 CGATCCGGAT GCCGATTTCA GCTACGACTA TGAAGACCTG GCGTTCGCGC GCGTCGGCGA 540 TTGCGGTTGA AGCCTGCGCG CTGCTGGTGC TGATCGGCTG CGTCGCCGCG GTGCGTTCGC 600 CGCAGGCGCA GTCCGATTCC GCGCCGGCCA AGCCGGCCGC CGCCGCGCCG GTGGCGGCGG 660 TCGCGCCGAC CATCTCCACC GCCCAGGACG CCGCGGCCGC GGGCATGGTC GAGATCCGCA 720 CTCTGGTGCC CGACATCGAC CTGGAGATCC GCTACGCCGG CAGCGACAAC TTCGTCGGCC 780 GTCCCATCGC GGGCTACCTC GGGCCCGGCT GCTACCTGCA CCGCCGCGCC GGCCGAAGCG 840 CTGGCGCGGG TCGAACGCGA ACTGCGCACG CAAGGCTTGC GGCTGCGGAT CTACGATTGC 900 TATCGGGCGG TGCGGGCGGT GCGCGACTTC GTCGCCTGGG CCGCCGACCC CGACGATCAG 960 AAGACCAAGT CGGGCTTCTA CCCCACGCTC GACAAAAGCA AGCTGCTCGG CGACTACATC 1020 TCGCCGACCT CCGGCCACAG CCGCGGCGCC ACGCTCGACT TGACCGTGCT CGAACGCCGC 1080 GGCGAGGGCT ACGCGCCGCT GGACATGGGC ACCGGCTTCG ATTTCTTCGA CGAGCTCGCC 1140 CACACCGAGT CGCCGCGCGC CAGCCTGGCT CAGCGCGGCC ATCGCCAGCG CCTGCGCGCG 1200 GCGATGCAGC GCGAGGGCTT CGAGAATTAT CCGCTGGAGT GGTGGCATTA CACCTTCAAG 1260 CCGGAGCCGA CGCCGGCAGT GGCGTTCGAT TTTCCGGTGC GGTGATCGGG GCGAAGAACA 1320 AAGGCAACGG AGAGTGTGCG GATCGCCGTG AGCGGCAGCG CTTTCGGAAC GCGCGTTTGC 1380 TCCGTGGGTT GCGACAGTCT TCTGGTGGAG GGGAAACGAT GAGCGGTGAG AAGCGTGCGG 1440 CGTTGCCGGC CACGGTTACG ACCGGTTTGC GCGGCGCGGG TTTCGCCGTC GTCGTCGCCT 1500 GCTTGGGCGC AGCGGCCTGC GCCGGTACGC CGTCGCGTGC GGCGGGGCAG GGCGCAGCGG 1560 ACGATGCGCA GGCCGAACGC GCAGTCGATG GCTTGCTTGC CGATTACCGC GGCCGCGTGC 1620 CCGGCGCCAG CGTGCTGGTG CTGCGCGACG GCCGCCCGCT GCTGCGCCGC GGCTACGGGC 1680 TGGCGGTGCT CGAAGACGGC ATCAAAGCTA CGCCGCAGAC CAATTACCGG CTGGCCTCGG 1740 TCAGCAAGCA GTTCACCGCC GCCGCTGTGC TGCTGCTGGC GCAGGACGGC AAGCTCGGCC 1800 TGGACGATCC GATCCGGCGC TGGCTGCCGA GCCTGCCCAA GGCCTGCGAC GCGATCACCC 1860 TGCGCCAGAT CCTCAGCCAC CAATCCGGCC TGATCGACTA CGAAGACGTG ATGCCGGCGA 1920 GCTTCGACGC CGACGCCCAC CAGATGCACG ACAGCGACGT GCTGGCGGTG CTCGAAGGCC 1980 AGGACCGCAC CTACTTCGCG CCCGGTAGCG GCTATCGTTA CAGCAACAGC GGCTATTCGC 2040 TGCTGGCGCT GGTTGTGGCC AAGGCTTCCG GGCGCGGCTT CGCCGAATTC CTGCGCGAGC 2100 GCATCTTCCT TCCGCTGGGC ATGCGCGACA CCGTGGCCTA CGAGCGCGGC GTGTCGAACG 2160 TGGCGCACCG CGCCTACGGC TACAGCTACG AGAACGGACG CTGGCAACGC ACCGACCAGA 2220 GCCCGACCAG CGCGACGCTC GGCGACGGCG GCATCTATTC ATCGATCGAC GATCTGGCCA 2280 AGTGGGATGC GGCGTTGTAC GACCAGCGCC TGCTCAGCGA CGCCTCGCGC GCGCTCGCTT 2340 TCGCCGCGCA CACGCCGACC GACGCGCCGG ACGTGGGCTA CGGCTATGGC TGGCGTATCA 2400 CCGGCGAGAC CTTGTGGCAT TCGGGCGAGT CGATGGGATT TCGCAACGTG ATCGTGCGTT 2460 GGCCGCAGCG GCGGCTGACG GTGGTGGTGT TGAGCAATCG CAACGATCCG GAGCCGTATC 2520 GGATGGCGTT GAAGATCCGG GATCTGTATT TGCCGGGGAG TCCGGTTCGC GGGCATTGAG 2580 CGATGCGCGC GGGAGCGGGG TTGCGTCGTA GTTGAGTTGG CGCGGTCGCG GCTTGCGCCG 2640 CTCCTACAGT TGGATACGTA GCTGCGGTCG CCCCCTGTAG GAGCGGCGCG AGCCGCGACC 2700 GCGAACCCGC CCGATCGCGC CGGACCCCGC CCCAACCGAT TCGCCCCACC CGCAGAACGC 2760 TCCGGACCGT CGCCGCCCGT CGCCTGGTGC TTGCTATTAA ATAGCGCGCT ATGTAAATTG 2820 CGGCCCATGA AGAAGCCCGC CGCCACCGCC GCCCGGAACG CCCCGGCCCA GCCGCCGCGG 2880 CCGACCCTGC TGCTCGACGA CCAGTTGTGC TTCGCCCTGT ATTCGACCGG GCTGGCGCTC 2940 AACAAGGGTC TACCGCAAGC TGCTCGGCTA GCTGGAGCTG ACCTATCCGC AGTACCTGGC 3000 AATGATGGCG CTGTGGGAGC GCGACGGGGT CTCGGTGTCG GAGATCGGCG AGCGCCTGTT 3060 CCTCGATTC 3069 // ID Contig1285 standard; DNA; UNC; 3411 BP. XX DE Contig1285.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..3411 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" SQ Sequence 3411 BP; 533 A; 1241 C; 1153 G; 484 T; 0 other; GCACGCACGC AACGTCGTGG TCTTCGCTTC CATCCCTCAC CTCGGCGTCG CCAAGCGATT 60 CCGTTGTTGC TGGCCCTGCA GTTCTACAGC GGCAGCGCGT CGGCGGCGTG CACGCCGGCC 120 GCGCCGACCG ACGGCGCCAC GGTGAGTTGC ACCGGCGTGC CGATCCTGTT GCCGCCGAAT 180 CCGAATTCGT TCCTCAGCAA CGCCAACAAC CTCAACGTCA CCGTGCAGTC CGGCGCGATC 240 ATGAGCACGC TGCCGCACGG TGAGTTGCAC CGGCGTGCCG ATCCTGTTGC CGCCGAATCC 300 GAATTCGTTC CTCAGCAACG CCAACAACCT CAACGTCACC GTGCAGTCCG GCGCGATCAT 360 GAGCACGCTG CCGGGCGGCA CTGCGATGAC CTTCGGCGGC AACGGCCTGA CCCTGACCAA 420 CCTCGGCGCG ATCGACGCCA ACGCCGCCGG CTCGCTGGTG CTGGCGCGTG CGCTGGCGGT 480 CGGCAACCTG GTCGTGCCGG GCAGCGGCAA CGTCGTCATC GACAATCAGG GTTCGATCGA 540 AGGCACTTTC GACGGCACCT TCGGCCTGCT CGGCTCGGCG ATGGTGGTGG CCAATACCGG 600 CAGCACCACG ATCACCAACT CCGGCAGCAT CGGTATGAGC GCGCTGGGTT TGTTCGACCC 660 GATCAATTCG ATCGCGGTCG GCATCTACGG CGGCGGCAAC GTCAATTTCA CCAACACCGG 720 CACCATCACC GGGCGGGTCG CGTTCTCCAG CCCGGGCGCG GGCGGCAACG TCTTCGTCAA 780 CTCCGGCACC ATCAACGGCA GCGTCTCGCT CGGCGCTTTG GGCGGCAGCA ACACCTTCGT 840 CGCGGTGACC GGTTCGAGCA TCAACGGCGG CCTGTTGCCG CTGCCGGGCG TGATCGTCCC 900 GACGCCTTCG ATTCCGCCGA GCGTGCTGAA CTACTCCACC AGCGGCACGG TCGACGCCGG 960 CCTCGGCGGC AGCGACACCC TGGTGCTGCA GAACGCCGTC GCCGGGCCCG GTTCGGGCAG 1020 CGGCGGCAGC GGCACGATCT CGGCGCTGCA ATACCTCAAC TTCGAAAACC TCACCCTCAA 1080 CAGCGGCACC TGGACCCTGC AGGGCGCGGT GGTCAGCGGC AGCGCCACGC TCAACGGCGG 1140 CACCGCGATC TTCGACAACG CGCTGTCGTT CGGCACCGGC ACGCTGACCG GCAACGGCGG 1200 CGCGATCGAG GCCTCCGTCG GCGGGCTGGC GCTGCTGCAG AACGTCAACC TCGCCGGCGG 1260 CCTGATCGTG CAGGGCGCGA ACAACCTCAC CCTGGGCGGC ACCGTCAGCG GCACCGGCGG 1320 CATGATCAAG AACGGCGCCG GCACGCTGAC TTTGGCCGGC AACAACAACT TCAGCGGCGG 1380 CTTCGCCCTC AACGGCGGCG GGCTGACCCT GGGCACGGCG AACTCGCTCG GCACCGGCCT 1440 GTTCCTGGTC GGCGGGCCGG CCTCGCTCAA TACCGCGTTC ACCGGCACGC TCGCCAACCA 1500 AGTGCAGCTC AACGGCGCGC TGACCCTCAA CGGCGCCGGC AACCTGACCC TCGGCGGCAA 1560 CATCAACGGC GCCGGCTCGC TGACGCTCGC CAGCGGCAAC CTGGCCCTGA CCGGCGCCAA 1620 CAACTACACC GGCGGCACCG TGCTGCAGGC CGGTTCGCTG CACCTGGGCA ACAGCGGCGC 1680 GATGGGCACC GGTACGCTGA CCGTCAACGG CGCGGCCGGG CTCACCGGCG CGGCGGGGGT 1740 GACGCTGGGC AACAACATCG TGCTCAACAA CACCTTGAAC TTCGGCGCCG GCGGCGGCGC 1800 GCTCACGCTC AACGGCGCGA TCAGCGGCGC CGGCGGGATC AGCATGGCCG GCGTGCCGGG 1860 GCTGGTGCTC AACGGCGCCA ACAATTTCTC CGGCGGCTTC AATCTCGGCG GCGGCGCGCT 1920 GGTGGTCGGC AACAACCTCG CGCTGGGCAC CGGCGCGGTG ACCGTCAGCG GCGCGGGCTC 1980 GCTCGACGCC AACGCCGGGG TCAGCCTGGC CAACAACTTC AACCTCAACG CCGGGCTCGC 2040 CATCGGCGGC AGCAACAATC TGGCGCTCAA CGGCAGCATC GGCGGCCTCG GCGGTTTGAC 2100 CAAGGCCGGC GCGGCGAACC TGACTCTCGG CGGCGCCAAC ACCTTCGCCG GCGGGCTGAA 2160 CCTGCTCGGC GGCGGTTTGA CCGTCGGCAC CAACACTTCG CTGGGCCTGG GCGCGCTGAC 2220 CGTCAACGGC GCGGCCACGC TCAACGCCAA TGCCGGGGTC AACCTGGGCA ATGCGGTGGT 2280 GCTCAACGCC GGGCTCGGCA TCGGCGGCGG CAACAACATC GCTCTGGGCG GCTTGATCAG 2340 CGGCGGCGGC GGGCTCAGCT ACAACGGCAC CGGCACGCTC GCGCTCAACG GCGCCAACAC 2400 GTTCGGCGGC GGCGTGAACC TGGGCAGCGG CACGCTGAGC GTCGGCAACA ATCTCGCGCT 2460 GGGTCTGGGC GGGCTCAACG TCGGCGGCAA CGCCAGCCTC AATGCCGGCG TGCCGGGCGT 2520 GAATCTCGGC AACGGCATCA CCCTCGGCGC GGGCGCGACG CTCGGGCTCG GCGGCGCCAA 2580 CGCGCTCGGC CTCAACGGCT CCATCGGCGG CGGCGGTGGG TTGGCGATCA ACGGCAGCGG 2640 CAGCTTCACT CTCGGCGGCG CCAACAGCTT TGGCGGCGGA GTCAATCTCG GTGCGGGCAA 2700 TCTGTTGCTG GGCACCGACA CGTCGCTCGG CCTGGGCGCG CTCAACGTCA GCGGCAACGC 2760 AGGGTTGGCG AGCACCGGCG CGGCCTTGAA CCTGGGCAAT GCGATCAATC TCGGCGCGGG 2820 CGCCGGGCTC AACCTCGGCG GCGCCGCGGA CCTGAGCCTG GGCGGCGGCA TCAACGGCGG 2880 CGGCTCGCTG ATCAAGAGCG GCGCCGGCAC CTTGTCCTTG AACGGCCTCA ACGGCTTCAC 2940 CGGCGGCCTG AGCCTGCAGG CCGGCACGCT CGCGCTCGGC AACGCCAATG CGCTCGGCAC 3000 CGGCGCGCTG TCAGTCAACG GCGCGGCCAC GCTCAACGCC GGCGCGGCGA TGAACTTGAA 3060 CAACGCGATC AACCTCAACG CCGGGCTGAC CCTCGGCGGC GGCGTCGATC TGGGCTTGAA 3120 CGGCAACATC GGCGGCGCCG GCGGGCTGAG CTTCAACGGC CCGTTCGCGC TGAGCTTGAA 3180 CGGCAACAAC AGCTTCGGCG GCGGCCTCGC GCTCGGCGGC GGTTCGCTCA GCGTCGGCAG 3240 CAACACCGCG CTGGGCACCG GCGCGCTCAA CGTCGGCGGC AGCGCCAACC TCAGCGCGGG 3300 TTTGCCGGGC ATCGCGCTCG GCAATGCGGT CAACCTCGGC GCCGGTGTGT CGCTCGGCAT 3360 CGGCGGCGGC AACGATCTGA GCCTGGGCGG CGCCATCGGC GCGCCGCGAT G 3411 // ID Contig1287 standard; DNA; UNC; 14731 BP. XX DE Contig1287.STD XX AC unknown DE Dehalococcoides sp. VS KW WGS XX FH Key Location/Qualifieers FT source 1..14731 FT /organism="Dehalococcoides sp. VS" FT /mol_type="contig DNA" FT /mol_topo="UNC;" FT gene 763..1128 FT /locus_tag="DeVSDRAFT_0158" FT /colour=11 FT CDS 763..1128 FT /locus_tag="DeVSDRAFT_0158" FT /product="transcriptional regulator, XRE family" FT /note="PFAM: helix-turn-helix domain protein; bacteriophage CI repressor" FT /note="SPTR: Q8PL80 Transcriptional regulator. Xanthomonas axonopodis pv. citri." FT /note="KEGG: xac:XAC1925 transcriptional regulator " FT /note="COGs: COG1396 transcriptional regulators category=K" FT /note="InterPro IPR001387:IPR010744" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT MRMEDRMRRARLHAKLSQQELATKIGVQRSAVAQWEKTGGNLPSMNHLIDIALATGVTLEWLGTGRGPIKADEETWTPAV FT ESLDYAQDETEYQCLQDLRRLPHQLRENLVGIIAQLAKNHP* FT " FT gene complement(1703..2374) FT /locus_tag="DeVSDRAFT_0159" FT /colour=0 FT CDS complement(1703..2374) FT /locus_tag="DeVSDRAFT_0159" FT /product="Tetratricopeptide TPR_2 repeat protein" FT /note="PFAM: Tetratricopeptide TPR_2 repeat protein" FT /note="COGs: COG5010 Flp pilus assembly protein TadD contains TPR repeats category=U" FT /note="InterPro IPR013105" FT /codon_start=1 FT /transl_table=11 FT /colour=0 FT /translation=" FT VPPRRSTARFRREVDALIGLAGETHGTTATYMDHLGLLYLCAGDNDRAAQSGVQTQYAVALLRSDRIEAARPIVAEVERM FT QGAVDEPGSQLAIHRGLGEWYLREGRNDEAIRHYRAARELASRPGMAYRWNLHAIDAGLGLALSRAGQSAQAREAYLRYG FT GSEVYDNRCVGGRGWRQIWIGCDIRDEFWGVGGPSASGGWTHEATVFSCFLRSSSSAVMRRNS* FT " FT gene 3403..4899 FT /locus_tag="DeVSDRAFT_0160" FT /colour=3 FT CDS 3403..4899 FT /locus_tag="DeVSDRAFT_0160" FT /product="monooxygenase, FAD-binding" FT /note="PFAM: monooxygenase, FAD-binding" FT /note="SPTR: Q2K8M9 Probable oxygenase (Tetracycline 6-hydroxylase) protein. Rhizobium etli (strain CFN 42 / ATCC 51251)." FT /note="KEGG: ret:RHE_CH02023 probable oxygenase (tetracycline 6-hydroxylase) protein " FT /note="COGs: COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases category=C" FT /note="InterPro IPR002938:IPR003042" FT /codon_start=1 FT /transl_table=11 FT /colour=3 FT /translation=" FT MTEHAVAIIGGGPTGLMLAAELALAGIDVAVVERRANQGLTGSRAGGLHSRTIEVLDQRGIAGRFLAEGQIAQVAAFANV FT RLDISDFPTRHPYGLGLWQSYIERILADWVSELAVTFYRERELVGFTQCANGVDVALSDGRSLRAEYLIGCDGGRSLVRK FT LADIDFPGWDPTISSLIAQVEMREEPPLGIRRTATGMHAIGKVDYKIEDGQVVYPPGGTVGVMLTEPQIAIHEPTLDDVR FT EGLIAVYGTNFGVHSPTSISRFTDGTRQAAAYRAGRVLLAGDAAHVHSPVGGQGLNTGVQDAVNLGWKLAQVIKRISPDS FT LLDTYHSERHPIGARVLRNTMAQVALMRVDDRIEALRENVADLLSMDEPRKRYGAMMSGLNIRYDFGEGHPLLGRRMPDL FT DLFVDGEPLRVFKLLHSARPVLLNFGGPGAVDIAAWADRVQRIDAVYSGPWELPVIGSVAAPSAVLIRPDGYVAWTGNGS FT QAGLANALSTWFGPAMAR* FT " FT gene complement(5131..5586) FT /locus_tag="DeVSDRAFT_0161" FT /colour=11 FT CDS complement(5131..5586) FT /locus_tag="DeVSDRAFT_0161" FT /product="Activator of Hsp90 ATPase 1 family protein" FT /note="PFAM: Activator of Hsp90 ATPase 1 family protein" FT /note="SPTR: A1FT22 Activator of Hsp90 ATPase-like 1-like protein. Stenotrophomonas maltophilia R551-3." FT /note="KEGG: ade:Adeh_2294 Aha1 domain protein " FT /note="COGs: COG3832 Uncharacterized conserved protein category=S" FT /note="InterPro IPR013538" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT MVDILHKIATKTQIDKVYDALATRQGVSAWWTTTVEGESEVGRSLTFRFYAGDKEIGAFEMKVLELDRNKRVSWQVAAGP FT QDWIGTKICFDLKQEGEYAVVLFKHEGWREASESMHHCSTKWAIFLMSLKAYLETGAGQPSPHDVKIDNWN* FT " FT gene complement(5745..6587) FT /locus_tag="DeVSDRAFT_0162" FT /colour=11 FT CDS complement(5745..6587) FT /locus_tag="DeVSDRAFT_0162" FT /product="hydrolases or acyltransferases (alpha/beta hydrolase superfamily)-like" FT /note="SPTR: Q1MIA3 Putative hydrolase. Rhizobium leguminosarum bv. viciae (strain 3841)." FT /note="KEGG: rle:RL1812 putative hydrolase " FT /note="COGs: COG0596 hydrolases or acyltransferases (alpha/beta hydrolase superfamily) category=R" FT /note="InterPro IPR003089:IPR008262" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT MRLSLLLTCLFAALAAPSAYAAPLEAPGASASTTTRTAAATPRSGVLPVDGVDYYYELHGQGEPLLLLHGGLGSGAMFGP FT VLSALAQRNTVILVDLQGHGRTALGERAFGIEAMGDDMGALVQRLGYDRVDVVGYSLGGGVALRMAVQRPAQVRKLVLVS FT SSYSNDAFYPAIGGQQKGINASAAPMFKGTPMYESYVAVAPKPDDFPRCSTPSAVSCRVPSTGRRTCRNCKGRSCSCTAT FT AICSVPKARSHSFNCSAAANATAAGSAKAFRTIAWRSCRA* FT " FT gene 6913..7482 FT /locus_tag="DeVSDRAFT_0163" FT /colour=13 FT CDS 6913..7482 FT /locus_tag="DeVSDRAFT_0163" FT /product="hypothetical protein" FT /note="SPTR: A1TF19 Hypothetical protein. Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1)." FT /note="KEGG: mva:Mvan_4997 conserved hypothetical protein " FT /note="InterPro IPR005479" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MIEINARAFPMIIDPAILSLSLTTLAAGALLGGGAYETRVVDPIWPRRIDIVQPRHGGMSRARFWIPAHIVFEVLLILSL FT VLTWESAQVRTWLLVSLASHAAMRIWSAFDFIPKALGFERGEAAAVSEESIKDWVRRSKWRLPLDWATCGALLVALSQAG FT SALMSRHRSLEPIHVAAKQDLAARGPVLG* FT " FT gene 7433..7975 FT /locus_tag="DeVSDRAFT_0164" FT /colour=11 FT CDS 7433..7975 FT /locus_tag="DeVSDRAFT_0164" FT /product="transcriptional regulator, MarR family" FT /note="PFAM: regulatory protein, MarR" FT /note="SPTR: Q89KD1 Transcriptional regulatory protein. Bradyrhizobium japonicum." FT /note="KEGG: bja:bll4976 transcriptional regulatory protein " FT /note="COGs: COG1846 Transcriptional regulators category=K" FT /note="InterPro IPR000835" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT MWQQSKISPPADPSLVEQVGLCVRKMGAQSVLTSQVIAQIFEMHTTDLEVLDLIFLRKQVTAGQLAEATGLSTGSVTALI FT DRLATAGYVERTTCAEDRRRVLVSVRPEAIEPIKSVYMDMKRRMSALWSGYSASELELVCDFLTRSTALQVECVTTIRAD FT NAVDRPTKKTSRNRRKNHAV* FT " FT gene 8113..8976 FT /locus_tag="DeVSDRAFT_0165" FT /colour=11 FT CDS 8113..8976 FT /locus_tag="DeVSDRAFT_0165" FT /product="amidohydrolase 2" FT /note="PFAM: amidohydrolase 2" FT /note="SPTR: Q1GWE2 Amidohydrolase 2 precursor. Sphingopyxis alaskensis (Sphingomonas alaskensis)." FT /note="KEGG: sal:Sala_0307 amidohydrolase 2 " FT /note="COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold category=R" FT /note="InterPro IPR002195:IPR006992" FT /codon_start=1 FT /transl_table=11 FT /colour=11 FT /translation=" FT MRLTFVLIVWSLAIAPALASAAPAPKTPVFDVHAHLREGEASLKTYEAEVSGAKLELAGFAGMWFGGPHQALQGDPAAVR FT QANDAHLALAAKHPEMLPVATVHPYDGQAALDELARVASLGVKVLKLHPHTQKFDASDPRVLKLVRKAGEVDVVVLFDNA FT NILPGDSERLFNLAVQAPKTRFIFAHIGGMNFRFWNMLALARTAKDFFADNIFFDISATAVLVADSPIEEEFVWTLRNVG FT IDQVLLGSDYPQLPLSRAVDALDRLDLSDEEKEKIRIGNARRLFGLR* FT " FT gene complement(9071..10057) FT /locus_tag="DeVSDRAFT_0166" FT /colour=13 FT CDS complement(9071..10057) FT /locus_tag="DeVSDRAFT_0166" FT /product="conserved hypothetical protein" FT /note="SPTR: Q11EQ6 Hypothetical protein. Mesorhizobium sp. (strain BNC1)." FT /note="KEGG: mes:Meso_2742 hypothetical protein " FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT MNANSDVIAWLLDSDPAIRWQVMRDLLDAPETDWQAERSKIERQGWGARLLAAQDADGQWDGGAFVPAGFTEQDWKDTGQ FT PWTATCWSLTQLREFGLYPDCACARRTTRQVGMNSRWEHAGQPYWAGEIEECINGRTVAQGAYFGVDVAPIVERLLSQRQ FT ADGGWNCERANGSRVSSFDTTINVLEGLLEFARINADADAIRNARQAGEEYLLRRHLFRRLTTGEPADPDYLLFVHPSRW FT RYDILRALDYFRDSSQFRNVKPDIRLDTAIAHVRSRRLSDGRWLLDKRIRGRIWFEIDEAPGEPSRWITLRALRVLKWWE FT SYKQPDDR* FT " FT gene complement(10151..11062) FT /locus_tag="DeVSDRAFT_0167" FT /colour=6 FT CDS complement(10151..11062) FT /locus_tag="DeVSDRAFT_0167" FT /product="transcriptional regulator, LysR family" FT /note="PFAM: regulatory protein, LysR; LysR, substrate-binding" FT /note="SPTR: Q0C5E2 Transcriptional regulator, LysR family. Hyphomonas neptunium (strain ATCC 15444)." FT /note="KEGG: hne:HNE_0321 transcriptional regulator, LysR family " FT /note="COGs: COG0583 Transcriptional regulator category=K" FT /note="InterPro IPR000847:IPR005119" FT /codon_start=1 FT /transl_table=11 FT /colour=6 FT /translation=" FT MKPRRPAPLNALRAFEAAARHSSFNLAAAQLFVTPAAISHQVKHLEAYLGARLFHRGHRSIELTPHGQELAATLGELFVR FT LDSALDRAMSGATAELRISSIESFAAKWLAPRLHRFYSAWPGLRVHVETGNQQADFIRDCIDVAIRYGPGGYPGVHAELL FT LTAEAFPVCSPKLLESDSPPLRQPRDLRRHTLLHDESSLGRPGVPCWSAWLEAAGAGSVAAGSGPVFASNYLAQEAAVAG FT HGVALGIAPLVAQDLAQGKLIRPFAASSENAYGFWMVRHQPDHAPLAVEAFCRWLREEAETSA* FT " FT gene 11192..12010 FT /locus_tag="DeVSDRAFT_0168" FT /colour=0 FT CDS 11192..12010 FT /locus_tag="DeVSDRAFT_0168" FT /product="beta-lactamase domain protein" FT /note="PFAM: beta-lactamase domain protein" FT /note="SPTR: Q83X38 Cyclase. Streptomyces rochei (Streptomyces parvullus)." FT /note="COGs: COG0491 Zn-dependent hydrolases including glyoxylases category=R" FT /note="InterPro IPR001279" FT /codon_start=1 FT /transl_table=11 FT /colour=0 FT /translation=" FT VRIEELAPEVLMFVGDEVESVATAFIHGDEAVLVDALGSVEDAQWLRTTLCDVLGKTVRMIAATHYMSDHLAALHLFPEA FT LVLAHRHHRATFLSQNQRVDAFYREPDLAFDNMVLRWGRHELRFAHNPGKTIDHLSVDVPSADLICMGDGIVGNIVYLSK FT ADPALMRSAIARARRWGRRKVVGGHMGAFDAVVLDHATYYLTRIQQQVTAIRVRAAESQVDPEIAAIPIESCLAPGVQPC FT AFEREWHRRNLHAIAAQSIFALDAARLSQVVA* FT " FT gene 12007..12870 FT /locus_tag="DeVSDRAFT_0169" FT /colour=13 FT CDS 12007..12870 FT /locus_tag="DeVSDRAFT_0169" FT /product="conserved hypothetical protein" FT /note="SPTR: Q1DBL0 Hypothetical protein. Myxococcus xanthus (strain DK 1622)." FT /note="KEGG: mxa:MXAN_1712 hypothetical protein " FT /note="COGs: COG2220 Zn-dependent hydrolases of the beta-lactamase fold category=R" FT /codon_start=1 FT /transl_table=11 FT /colour=13 FT /translation=" FT VSRPPTAPQTSNARRRLLFALAAAACTLPAGTLRARPAAEATLRIQRLAWAGIRLQLPQATLFIDPLIDPSAWGASLSDR FT LVSVDDSVGSTSVLITHAHPDHFDPAAAAKALHEGGVLAHPVGLNPTPLPSAVRTRPSPLWEPQLLGDFTATPVPASDGY FT GDTQVSWIVTAGGRRIFHGGDTQWHGHWWRIGRQFGPFDAAFLPINGARFGWRQPVSDVPGVLTPEQAVAAAAILGARVM FT VPIHYGVTGMKQYTEVADPIGAVQLASRERQVAVQSLAPGEWLSWPA* FT " FT gene complement(13679..14119) FT /locus_tag="DeVSDRAFT_0170" FT /colour=6 FT CDS complement(13679..14119) FT /locus_tag="DeVSDRAFT_0170" FT /product="response regulator receiver protein" FT /note="PFAM: response regulator receiver" FT /note="SPTR: Q8P5A6 Two-component system regulatory protein. Xanthomonas campestris pv. campestris." FT /note="KEGG: xcb:XC_0729 two-component system regulatory protein " FT /note="COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain category=K" FT /note="InterPro IPR001789" FT /codon_start=1 FT /transl_table=11 FT /colour=6 FT /translation=" FT MTELRTILLAEDSPFDAEMAIDALRDANLLNPVVHVNDGVEALDYLYRRGAFAGRTDGDPSVVLLDIKMPRIDGLEVLAE FT MRKDEKLRTLPVVILSSSREEADLVRSWGLGVNAYVVKPVDVDQFFDAVRTLGRFWAVLNEPLEAN* FT " FT gene complement(14116..14730) FT /locus_tag="DeVSDRAFT_0171" FT /colour=15 FT CDS complement(14116..14730) FT /locus_tag="DeVSDRAFT_0171" FT /product="histidine kinase" FT /note="PFAM: ATP-binding region, ATPase domain protein domain protein" FT /note="SPTR: Q3BXN8 Two-component system sensor protein. Xanthomonas campestris pv. vesicatoria (strain 85-10)." FT /note="KEGG: xcv:XCV0744 two-component system sensor protein " FT /note="COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase) category=T" FT /note="InterPro IPR003594:IPR004358:IPR005467" FT /codon_start=1 FT /transl_table=11 FT /colour=15 FT /translation=" FT EAADEKSRHYIGVISTSAKRMSHLIDDLLVYSRLGRSALRLQSVDMQSLVQDTRAMLDANLKLDQAERIVEWRIGQMPVV FT VGDENMLRQIWLNLLGNAVKYSAQREPAVIEVSHAYDADRNHLFTVRDNGAGFDMAYAGKLFGVFQRLHSATEFPGTGIG FT LATVRRVASRHGGRVWAEGRPNEGATFFLLLPASDQPISERLPS* FT " FT misc_feature order(6946..7014,7105..7164) FT /colour=11 FT /locus_tag="DeVSDRAFT_0163" FT /note="2 probable transmembrane helices predicted by FT TMHMM2.0" FT sig_peptide complement(6492..6587) FT /colour=11 FT /locus_tag="DeVSDRAFT_0162" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 1.000) with cleavage site probability 0.813 at FT residue 32" FT sig_peptide 8113..8178 FT /colour=11 FT /locus_tag="DeVSDRAFT_0165" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 1.000) with cleavage site probability 0.978 at FT residue 22" FT sig_peptide 12007..12114 FT /colour=11 FT /locus_tag="DeVSDRAFT_0169" FT /note="Signal predicted by SignalP 2.0 HMM (Signal peptide FT probabilty 0.999) with cleavage site probability 0.803 at FT residue 36" SQ Sequence 14731 BP; 2753 A; 4740 C; 4489 G; 2749 T; 0 other; CAGGCGTGCC GAGGTTGAAG GTGTACTGCG GTGCGAGCGC GCCGAAACGT AGCGTCCCGA 60 TCGAACTGTT GCTGCCGTTG CCGAACGACA CCGTAGGCAC CAATGCGGCG TTGAAGGTCG 120 CTACGCCGGT CGGCACCGAA CCCGAACTCC AGCTTGCGGC GTTGTTCCAG GATCCGCCGC 180 CGACGCCTGT CCACGTCGCA TCCTGGGCGG CCGCGATCGC CGGTTGCGCC AGCTGCAACA 240 CGATCAGGAA CTGCAATCCG ATCCGGATGT TTCGGCTCAG AGGATGAAGG CATGTGGATT 300 TGCGTTGTTC ACCGCGCCAT TTCTTGCTGA AGCGCTGGAC CCAGAAACGA CTCGTGGCGT 360 TCTTCCGCAT GACCGCTCTC CCTACAGCGA CGTATCGATA CGACGGTGCG CAAAGCCCGG 420 CTTCGAGCGA TCCGTGATCG GATCGACGTG AAAAGCGGCT TTGGAGTGAT GTGCGACTGA 480 CTTCTCAGAT CCAGGCAAAC GGTGCTCGCG TTCCGTTTTT TTAAGGCAGA AAAGACGCGC 540 TCTTAAGCAA CGAATTTCGT GAGCCCTTCT ACACCTGTTT GCGAAAGATT CATGTCTACT 600 GAGACGAGGA AAAACCCTCG CATGGAAAAA GATGAACGCG GAAAAACCAG TAATTTCAGC 660 CTGTTCACGA AAAGTGCGAA CCCCGTCGTT CAGTCTTTAG TCCGACCTCG ATAACCGGTA 720 AGCAAAACCG GACGTGGACC ACTCGATAGG GAGGCCAATT GAATGCGTAT GGAAGACCGG 780 ATGCGCCGCG CTCGATTGCA CGCCAAGCTG TCGCAACAGG AATTGGCGAC CAAGATCGGC 840 GTGCAGCGCA GCGCCGTGGC GCAATGGGAA AAGACCGGGG GCAATCTCCC CTCGATGAAT 900 CACTTGATCG ACATCGCGCT GGCGACCGGC GTGACGCTAG AGTGGCTGGG AACGGGGCGC 960 GGCCCGATCA AGGCCGACGA AGAAACCTGG ACCCCTGCGG TCGAGAGCCT CGATTACGCC 1020 CAGGACGAAA CCGAGTATCA GTGCCTGCAG GATCTAAGAC GTCTGCCTCA TCAGCTACGG 1080 GAGAATTTGG TCGGGATCAT CGCCCAACTC GCGAAAAATC ATCCTTGAGG CACCGGGCGA 1140 CGCGCTGCCT CCCCTAGCTA AAGGTTCGGC TCCGAGACGG GTGGTAGAGG CACTTGTTCG 1200 CGATACCCCG AAGTGCTGAA ACCTTCCACC ACGCAGAGCG TATATGGAAA TTCGGCAGCC 1260 ACCCGAGCTA CCGCCCACCT ATAGCTGGTC GGTCCTCGAA CTCCCAGATG GCCGGACCGC 1320 CGTGGAGCTT CGGTGCTGGG GCCACGATCG TGTGGCTTAT GCATTTCAGC CAAAGCGACG 1380 TAAGTGCTGG TACGTCGGGG GCGAACGCAC AGCCACGGCT AGCTCCTTGA CATTCAGGCG 1440 CACCCAGTGC GCTACCGTAC ATGATGCTTA CATACAACTC GCGCGGTGGG CACATGAGCA 1500 TGAACGCATG GTAGCCGCTA GCGCGCCATA AGCTAAGGTG GGCCGACCAC GGACAGTCCG 1560 CGCCACTGCG CTGTCTACAC ACGAGGCAGA ACGCGCTTGC TTGCCGCTCC AAATCGACTT 1620 GGGAAGTTCC AGTTCCTTTG AACTTAGCGC ACCAGCCACA CCAATTTGAG TGAATCCTCC 1680 ATAGAAGATC CCACCGCATC GATTACGAAT TTCGCCGCAT TACGGCAGAC GAAGAAGATC 1740 TAAGAAAGCA AGAAAAGACC GTAGCTTCGT GAGTCCAGCC TCCGCTAGCA CTAGGGCCGC 1800 CAACACCCCA AAACTCATCG CGAATATCGC AGCCGATCCA AATCTGCCTC CATCCGCGCC 1860 CCCCAACGCA GCGGTTGTCG TAGACCTCAC TCCCGCCATA ACGCAGATAC GCCTCCCGCG 1920 CCTGTGCGCT TTGCCCGGCA CGCGACAGCG CCAGTCCTAA CCCCGCATCG ATCGCATGCA 1980 GATTCCACCG ATACGCCATC CCCGGCCGCG ACGCCAATTC CCGCGCGGCC CGGTAATGTC 2040 GGATCGCCTC GTCGTTGCGC CCCTCGCGCA GATACCACTC GCCCAGCCCA CGATGGATCG 2100 CCAACTGCGA TCCGGGCTCA TCGACCGCGC CTTGCATCCG CTCGACCTCG GCCACGATCG 2160 GCCGCGCCGC TTCGATGCGG TCGCTGCGCA ACAGCGCCAC GGCATACTGC GTCTGCACCC 2220 CCGATTGCGC GGCGCGGTCG TTGTCGCCGG CGCACAGGTA CAGCAAGCCC AGGTGGTCCA 2280 TGTAGGTCGC GGTGGTGCCG TGGGTCTCGC CGGCCAGGCC GATCAGGGCG TCGACTTCGC 2340 GACGGAATCG GGCGGTGCTT CGTCGTGGCG GCACAGCGCG CTCAGCGCCA CAGCGATGCG 2400 GATGCGGGCG ATGGTCGCCG CTGTGCGGGC CGTTGGCGGC GGCGTCGCGT TCGCCGCATC 2460 CCTGCGTGCA CCCATGCCAC TAATCGCTTG TGCCTATCGC TCCTAAAACT AACGACACCT 2520 CATTTTTCGC TGAATGGTTC ATCTAAACCC GCAGCCATCG CATCCGGGGC GCGCGAATTG 2580 GGGCTCACCG TTTAGCTGAC TAATTCAGCT AAATTTTCGG CTTTATCTAG TCAGGTTCTT 2640 GAATGGGTGC TCAGATACTG GTCCTTAGAG CGACGCCTAC GTAACGAATG AAGGCCTTCG 2700 TCCGGGTGAC CCAGTACAAC CCTGTTCTGC TTGTGTGCGA CTCGGGTGCA TTGGGTCTTC 2760 CTGCGTTGAC CGGCAAAGGT CCGATCCAGG TAAGCGATTC TTGTGTCGCG GTCCGCAGCG 2820 CCAGCGCTAA CGGGCTGGTC ACGCGCCTAC TGGTCACTGA TGAACTGGTG GCGCGGCCCG 2880 GCGATTTGAT CTGTCGCCAC TACATTCGCA CGCCCAATCG CGCCGTCGTG GTCTGCTCGG 2940 TGCTACTGGA GTTATACGCC GCTGTAGTCA CGCGCAGAAC GTGGTCTCTG GTGAGGGTGT 3000 ACACCAACGA TCCGATCGCG CCTGATCGCG TGGTGGTGGT AGTCGGCGAA CCAGACCACT 3060 CGATATGACC GAGCGGACGA CCCCTCGCGC GACGCGCATC GGCAGGCGGT TGCTGGATGG 3120 AAACGCGGAG CGCGCGAAGC TGTAACCATT GCCGGGCGAC TGGGTGTCCG CACCGTATAA 3180 GAAAGCGCTG ATCGTAGCGG CGGCCCGCTG GGACCATATC GAGGTCAGGG CACGCCGGTG 3240 CGACTGGCAC AGGGATCAGG CTGCATCGGC GGATCTTCTT CCGCCGCTTT GCCCGAAAAA 3300 ACGCTGCCTC CCGTTTCAAT ATGCTAAACC AATACGGGCT TGCCGCAAGC CCTCCCGCGT 3360 ATCGTTCAAT CGCCGCCTCA GCGACCCAGC GAGGAGCAGA CGATGACCGA ACATGCCGTG 3420 GCAATAATTG GAGGCGGCCC GACCGGGCTG ATGCTGGCCG CTGAGCTGGC GCTAGCCGGA 3480 ATCGACGTCG CCGTCGTCGA GCGCCGCGCC AACCAAGGCC TGACCGGCTC GCGGGCCGGC 3540 GGCCTGCATT CCCGCACCAT CGAGGTGCTG GATCAGCGCG GTATTGCTGG GCGTTTTCTC 3600 GCCGAGGGCC AGATCGCGCA AGTCGCTGCG TTCGCCAATG TGCGTCTCGA CATCAGCGAC 3660 TTCCCTACCC GCCATCCGTA CGGCCTCGGG CTGTGGCAAA GCTATATCGA ACGCATTCTC 3720 GCCGACTGGG TCAGCGAACT GGCGGTGACG TTCTATCGCG AACGTGAGTT GGTCGGCTTC 3780 ACCCAGTGCG CGAACGGCGT CGATGTCGCG CTCTCCGACG GCCGCTCCCT TCGCGCCGAA 3840 TATCTGATCG GTTGCGACGG CGGGCGCAGC CTGGTCCGCA AGCTCGCCGA CATCGACTTC 3900 CCCGGTTGGG ATCCGACGAT CAGCAGCCTG ATCGCCCAGG TGGAGATGCG CGAAGAACCG 3960 CCATTGGGCA TCCGCCGTAC CGCCACAGGC ATGCACGCGA TCGGCAAGGT CGACTACAAG 4020 ATCGAGGATG GGCAAGTCGT CTACCCGCCG GGCGGAACCG TCGGCGTCAT GCTGACCGAG 4080 CCGCAAATCG CTATTCATGA GCCGACGCTG GACGATGTCA GGGAAGGCTT GATCGCTGTA 4140 TACGGGACGA ACTTCGGCGT GCACAGTCCG ACTTCGATCT CCCGTTTTAC TGATGGTACC 4200 CGCCAAGCAG CGGCTTATCG TGCAGGAAGA GTGCTGCTGG CGGGCGACGC CGCGCACGTC 4260 CATTCGCCGG TCGGCGGACA GGGGCTCAAT ACCGGCGTGC AGGACGCGGT GAATCTCGGC 4320 TGGAAACTCG CGCAGGTGAT CAAGCGGATC TCGCCGGACA GTCTGCTCGA CACCTATCAC 4380 AGCGAGCGCC ATCCGATCGG TGCGCGGGTC CTGCGCAACA CCATGGCGCA AGTCGCGCTG 4440 ATGCGCGTGG ACGACCGCAT CGAAGCGTTG CGCGAAAACG TCGCCGATTT GCTGAGCATG 4500 GACGAGCCGC GCAAGCGCTA CGGGGCGATG ATGTCCGGGC TCAATATCCG CTATGACTTC 4560 GGTGAAGGCC ATCCGTTGCT CGGGCGGCGC ATGCCCGATC TGGATCTGTT TGTTGACGGC 4620 GAGCCTCTGC GCGTTTTCAA GCTGCTTCAC AGTGCACGGC CGGTGCTGCT GAACTTCGGC 4680 GGTCCCGGCG CTGTCGATAT AGCGGCATGG GCCGATCGCG TGCAACGAAT CGACGCGGTT 4740 TACTCAGGTC CTTGGGAACT CCCAGTGATC GGTTCGGTCG CCGCGCCGAG CGCAGTGTTG 4800 ATTCGTCCGG ATGGCTACGT CGCGTGGACC GGAAACGGGA GCCAAGCTGG GCTCGCGAAT 4860 GCGCTTTCTA CCTGGTTCGG CCCGGCGATG GCTAGGTAGC GCCGCGATAA ATTCGATCGA 4920 TCCGAACGAT TGCAAAAACT TAACCGACTA TCGCCTCCAT GGCGTCCGCG CGCCCTTCGT 4980 GCTTGCGCGC CTGGACTGCC CGCAACACCG CGATATTGTG TTTCTTCAGC CCTTCACGAG 5040 GACTGCTTCG CCAGCGAAAG CACGACGTGT TCTCCAAGTA CACGCCGTGC TCGCGACCGG 5100 TCAGATCACC TCAAATCATT GGCGACAGCC TCAGTTCCAG TTGTCGATCT TGACGTCATG 5160 CGGGCTAGGC TGCCCCGCGC CCGTTTCAAG ATATGCCTTG AGGCTCATCA GAAAAATCGC 5220 CCACTTGGTG CTGCAGTGAT GCATCGATTC CGATGCCTCT CGCCAGCCCT CGTGTTTGAA 5280 CAGGACGACT GCATACTCCC CTTCTTGCTT CAGGTCGAAG CAGATCTTGG TGCCGATCCA 5340 GTCCTGCGGA CCCGCGGCGA CTTGCCACGA CACGCGCTTG TTGCGATCCA GTTCGAGCAC 5400 CTTCATCTCG AACGCGCCGA TTTCCTTGTC GCCGGCGTAG AACCGGAACG TGAGCGAACG 5460 ACCGACCTCG CTTTCGCCTT CGACCGTGGT CGTCCACCAG GCGCTGACGC CCTGCCGGGT 5520 GGCCAGCGCG TCGTAGACCT TGTCGATCTG CGTTTTCGTA GCGATCTTGT GCAGGATATC 5580 GACCATCTGG GTTTCTCCTT GGTGATTGCT TGAAGTTGTG CGGATCGCCT ACTTCGACGG 5640 CGATGGCGCG GCTTGAGGCG CGGAAGCGCC GCGTTCGATT GCTTCGGCGA GAAACGGCGC 5700 GAGCGTCTGC GCCAGCAGTG GCGAAGACGC GATCTCGTAG TGCGTCACGC CCGGCAGGAT 5760 CGCCAGGCGA TTGTTCGAAA CGCCTTCGCG CTGCCAGCCG CCGTCGCGTT TGCCGCCGCC 5820 GAGCAATTGA AAGAATGCGA TCTCGCTTTC GGGACGGAAC AGATCGCTGT CGCCGTACAC 5880 GAGCATGACC GGCCCTTGCA GTTTCGACAC GTCCGCCGAC CAGTTGAAGG GACGCGACAG 5940 GAAACCGCCG ATGGCGTCGA GCAGCGCGGG AAGTCGTCGG GCTTGGGCGC CACCGCTACG 6000 TAGGACTCGT ACATAGGCGT TCCCTTGAAC ATCGGCGCGG CGCTGGCGTT GATCCCTTTC 6060 TGCTGACCGC CGATCGCCGG ATAGAACGCA TCGTTGGAGT ATGAAGAAGA CACCAGAACG 6120 AGCTTGCGCA CTTGAGCGGG CCGCTGCACC GCCATTCGCA ACGCGACACC GCCGCCTAGG 6180 GAATAACCGA CGACGTCCAC GCGGTCGTAA CCCAGGCGCT GCACCAACGC CCCCATGTCG 6240 TCGCCCATCG CTTCGATGCC GAAGGCCCGT TCGCCCAGCG CGGTGCGGCC GTGGCCCTGC 6300 AGGTCGACCA GAATCACCGT ATTGCGCTGG GCCAGCGCGC TCAGCACCGG CCCGAACATC 6360 GCGCCGCTTC CGAGGCCGCC ATGCAGCAAT AGCAGCGGTT CGCCTTGGCC GTGCAGTTCG 6420 TAGTAGTAAT CGACGCCATC GACTGGAAGA ACGCCGCTGC GTGGCGTCGC GGCCGCGGTC 6480 CGGGTGGTTG TGGATGCGCT TGCACCCGGA GCTTCGAGGG GAGCGGCGTA TGCCGAAGGG 6540 GCCGCCAGTG CGGCGAACAG GCAGGTCAAC AACAAGGACA GACGCATGGG AATCTCCGGA 6600 AAGTGGGTTG CGGGCCAGCC GCAGCTTGGC CTTCTATCAA GCGACGTACA GCCGCGAGCC 6660 AAATCGACAT CGAAGAAATA TGTCCGGCGT TTCCGCGATC GGCGCCGTGC ATCGAAGACT 6720 TCCCAGGTTC CCCGCCCTCA TCGGCTCGCG GTTGCCCGCC CCATGGCGCA TCCATCTATA 6780 CGCTCGCGAG CCAAGCGCTT CGGCTTTTCG AATCGTCACG CGATGAGATT CGGTTGCGAC 6840 GCAATCATCC GGCCTACGCC CCTGCAAGCC CGGCTGATGC CCTATCGCAA GCGACTGGAT 6900 TAGATTATCT TGATGATCGA GATAAATGCA AGAGCCTTCC CGATGATCAT CGACCCAGCC 6960 ATCCTCAGCC TGTCCCTGAC GACGCTCGCC GCCGGCGCAT TGCTGGGCGG CGGCGCCTAC 7020 GAAACGCGCG TCGTCGACCC GATCTGGCCG CGCCGCATCG ACATCGTCCA ACCACGACAC 7080 GGCGGCATGT CGCGCGCGCG CTTCTGGATT CCCGCGCACA TCGTGTTCGA AGTGCTGTTG 7140 ATCTTGTCGC TGGTTCTGAC CTGGGAGTCG GCGCAGGTCA GGACCTGGTT GCTCGTGAGC 7200 CTGGCGAGCC ACGCGGCGAT GCGAATTTGG TCTGCGTTCG ACTTCATTCC CAAAGCGCTG 7260 GGGTTCGAGC GCGGCGAGGC CGCGGCAGTC AGCGAGGAAT CGATCAAGGA CTGGGTCAGG 7320 CGCAGCAAAT GGCGTTTGCC CTTAGACTGG GCCACCTGCG GCGCGTTGCT CGTCGCCTTG 7380 TCCCAAGCCG GCAGCGCCCT CATGAGCCGG CATCGATCGC TCGAACCTAT CCATGTGGCA 7440 GCAAAGCAAG ATCTCGCCGC CCGCGGACCC GTCCTTGGTT GAGCAGGTAG GGCTGTGCGT 7500 GCGGAAAATG GGCGCGCAGA GCGTTCTCAC CAGCCAGGTG ATCGCGCAAA TTTTCGAAAT 7560 GCACACCACC GATCTGGAAG TTCTCGATCT GATCTTCCTG AGAAAACAGG TGACCGCCGG 7620 ACAGCTGGCG GAAGCGACCG GCTTGTCGAC GGGATCGGTC ACGGCTTTGA TCGACCGGCT 7680 GGCGACGGCG GGCTATGTCG AACGCACCAC TTGCGCGGAG GATCGGCGCA GGGTGCTGGT 7740 CTCGGTCCGT CCCGAGGCCA TCGAGCCTAT CAAGTCGGTG TACATGGACA TGAAACGACG 7800 CATGTCCGCG CTGTGGTCGG GCTACTCGGC GAGCGAGCTC GAACTCGTTT G