Summary of the tRNAs found by tRNAscan-se
| Amino Acid | Count |
|---|
| Ala | 1 |
| Arg | 5 |
| Asn | 2 |
| Asp | 1 |
| Cys | 1 |
| Gln | 1 |
| Glu | 0 |
| Gly | 3 |
| His | 1 |
| Ile | 0 |
| Leu | 5 |
| Lys | 3 |
| Met | 3 |
| Phe | 1 |
| Pro | 3 |
| Pseudo | 0 |
| Ser | 4 |
| Thr | 2 |
| Trp | 0 |
| Tyr | 0 |
| Undet | 1 |
| Val | 4 |
List of tRNAs found by tRNAscan-se
| Amino Acid | Anticodon | Contig | tRNA | tRNA Location | Intron Location | Cove Score | HMM Score |
|---|
| Ala | CGC | Contig32 | 3 | 2318 ..2243 | 0..0 | 80.39 | 67.63 |
| Arg | ACG | Contig5 | 2 | 81316 ..81240 | 0..0 | 88.62 | 73.55 |
| Arg | ACG | Contig5 | 3 | 81171 ..81095 | 0..0 | 88.62 | 73.55 |
| Arg | CCG | Contig55 | 1 | 97078 ..97153 | 0..0 | 83.93 | 61.49 |
| Arg | CCT | Contig30 | 1 | 213129..213203 | 0..0 | 67.55 | 47.56 |
| Arg | TCT | Contig7 | 4 | 90763 ..90839 | 0..0 | 87.25 | 65.09 |
| Asn | GTT | Contig6 | 1 | 35841..35766 | 0..0 | 84.40 | 60.26 |
| Asn | GTT | Contig6 | 2 | 35703..35628 | 0..0 | 84.40 | 60.26 |
| Asp | GTC | Contig17 | 4 | 301444..301520 | 0..0 | 84.93 | 68.73 |
| Cys | GCA | Contig7 | 3 | 36671 ..36744 | 0..0 | 64.58 | 40.44 |
| Gln | TTG | Contig31 | 2 | 333525..333601 | 0..0 | 76.28 | 51.78 |
| Gly | CCC | Contig5 | 5 | 53311 ..53238 | 0..0 | 65.01 | 39.19 |
| Gly | GCC | Contig7 | 1 | 36339 ..36414 | 0..0 | 93.38 | 69.93 |
| Gly | GCC | Contig7 | 2 | 36496 ..36571 | 0..0 | 93.38 | 69.93 |
| His | GTG | Contig17 | 1 | 136104..136179 | 0..0 | 78.52 | 56.21 |
| Leu | CAA | Contig5 | 6 | 47797 ..47713 | 0..0 | 75.09 | 47.34 |
| Leu | CAG | Contig17 | 6 | 103093..103007 | 0..0 | 69.58 | 43.74 |
| Leu | CAG | Contig17 | 7 | 102854..102768 | 0..0 | 76.78 | 44.13 |
| Leu | GAG | Contig29 | 1 | 37069..36985 | 0..0 | 63.68 | 32.34 |
| Leu | TAA | Contig10 | 1 | 28298..28382 | 0..0 | 75.46 | 43.86 |
| Lys | CTT | Contig32 | 1 | 105213..105288 | 0..0 | 94.68 | 68.65 |
| Lys | TTT | Contig31 | 1 | 137529..137604 | 0..0 | 89.16 | 77.88 |
| Lys | TTT | Contig37 | 1 | 16163 ..16088 | 0..0 | 93.40 | 77.14 |
| Met | CAT | Contig11 | 1 | 65129 ..65205 | 0..0 | 86.01 | 58.68 |
| Met | CAT | Contig17 | 5 | 124086..124008 | 0..0 | 67.50 | 43.56 |
| Met | CAT | Contig4 | 1 | 45099 ..45023 | 0..0 | 90.46 | 71.71 |
| Phe | GAA | Contig32 | 2 | 85151 ..85076 | 0..0 | 86.97 | 72.17 |
| Pro | CGG | Contig3 | 1 | 16327 ..16251 | 0..0 | 81.43 | 57.93 |
| Pro | GGG | Contig9 | 1 | 5617 ..5693 | 0..0 | 81.38 | 60.95 |
| Pro | TGG | Contig7 | 5 | 82760 ..82684 | 0..0 | 89.00 | 64.06 |
| Ser | CGA | Contig30 | 2 | 312420..312331 | 0..0 | 70.39 | 31.93 |
| Ser | GCT | Contig12 | 1 | 23855 ..23948 | 0..0 | 69.97 | 43.69 |
| Ser | GGA | Contig27 | 1 | 144789..144879 | 0..0 | 71.26 | 47.56 |
| Ser | TGA | Contig5 | 4 | 73128 ..73039 | 0..0 | 75.81 | 41.74 |
| Thr | CGT | Contig5 | 1 | 90109 ..90034 | 0..0 | 86.97 | 70.99 |
| Thr | TGT | Contig0 | 1 | 84923..84998 | 0..0 | 81.06 | 67.51 |
| Undet | ??? | Contig17 | 2 | 271590..271675 | 0..0 | 62.16 | 39.54 |
| Val | CAC | Contig7 | 6 | 52331 ..52257 | 0..0 | 85.83 | 64.47 |
| Val | GAC | Contig38 | 1 | 10132 ..10208 | 0..0 | 91.08 | 63.95 |
| Val | GAC | Contig8 | 1 | 59360..59436 | 0..0 | 90.22 | 63.10 |
| Val | TAC | Contig17 | 3 | 287663..287738 | 0..0 | 93.03 | 70.11 |
tRNA Models
Contig0.trna1 (84923-84998) Length: 76 bp
Type: Thr Anticodon: TGT at 34-36 (84956-84958) Score: 81.06
HMM Sc=67.51 Sec struct Sc=13.55
* | * | * | * | * | * | * | *
Seq: GCCGGCTTAGCTCATCAGGTAGAGCGCTTGACTTGTAATCATGAGGtGGCGGGTTCGAGTCCTGCAGCCGGCACCA
Str: >>>>>>>..>>>>........<<<<.>.>>>.......<<<.<.....>>>>>.......<<<<<<<<<<<<....
Contig10.trna1 (28298-28382) Length: 85 bp
Type: Leu Anticodon: TAA at 35-37 (28332-28334) Score: 75.46
HMM Sc=43.86 Sec struct Sc=31.60
* | * | * | * | * | * | * | * |
Seq: GCCGGGATGATGAAATTGGTaAACATAGCGGACTTAAAATCCGCCGCCTAACGGCTTGCCGGTTCGAGTCCGGTTCCCGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<....
Contig11.trna1 (65129-65205) Length: 77 bp
Type: Met Anticodon: CAT at 35-37 (65163-65165) Score: 86.01
HMM Sc=58.68 Sec struct Sc=27.33
* | * | * | * | * | * | * | *
Seq: CGCGGGGTGGAGCAGTCtGGCAGCTCGTCGGGCTCATAACCCGAAGGtCGTAGGTTCAAATCCTACCCCCGCAACCA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....
Contig12.trna1 (23855-23948) Length: 94 bp
Type: Ser Anticodon: GCT at 35-37 (23889-23891) Score: 69.97
HMM Sc=43.69 Sec struct Sc=26.28
* | * | * | * | * | * | * | * | * |
Seq: GGAGACGTGGCCGAGAGGTcgAAGGCACTCCCCTGCTAAGGGAGCATCTGGGCCAAaACCTGGAtCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>.>>.......<<.<<...>>>>>.......<<<<<<<<<<<<....
Contig17.trna1 (136104-136179) Length: 76 bp
Type: His Anticodon: GTG at 34-36 (136137-136139) Score: 78.52
HMM Sc=56.21 Sec struct Sc=22.31
* | * | * | * | * | * | * | *
Seq: GTGGCTGTAGCTCAGTTGGTAGAGTCCAGGATTGTGATTCCTGTTGtCGTGGGTTCGAGCCCCATCAGCCACCCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
Contig17.trna2 (271590-271675) Length: 86 bp
Type: Undet Anticodon: ??? at 0-0 (0-0) Score: 62.16
HMM Sc=39.54 Sec struct Sc=22.62
* | * | * | * | * | * | * | * | *
Seq: GCGAGGGTGGCGAAATTGGTaGACGCACCAGTTTAGGTCCTGACGCCCGCAAGGGTGTAGGGGTTCGAGTCCCCTCCCTCGCACCA
Str: >>>>>>>..>>>...........<<<..>>>........<<<..>>>>....<<<<..>>>>>.......<<<<<<<<<<<<....
Contig17.trna3 (287663-287738) Length: 76 bp
Type: Val Anticodon: TAC at 34-36 (287696-287698) Score: 93.03
HMM Sc=70.11 Sec struct Sc=22.92
* | * | * | * | * | * | * | *
Seq: GGGTGCTTAGCTCAGTTGGTAGAGCGGCGCCCTTACAAGGCGTAGGtCGGGAGTTCGAGCCTCTCAGCACCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
Contig17.trna4 (301444-301520) Length: 77 bp
Type: Asp Anticodon: GTC at 35-37 (301478-301480) Score: 84.93
HMM Sc=68.73 Sec struct Sc=16.20
* | * | * | * | * | * | * | *
Seq: CGAGTGGTAGTTCAGTCGGTtAGAATACCGGCCTGTCACGCCGGGGGtCGCGGGTTCGAGTCCCGTCCACTCCGCCA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....
Contig17.trna5 (124086-124008) Length: 79 bp
Type: Met Anticodon: CAT at 35-37 (124052-124050) Score: 67.50
HMM Sc=43.56 Sec struct Sc=23.94
* | * | * | * | * | * | * | *
Seq: CGCGGGGTGGAGCAGTCtGGCAGCTCGTCGGGCTCATAAcCCCGAAGGtCGTAGGTTCAAATCCTACcCCCCGCAACCA
Str: .>>>>>>..>>>>.........<<<<.>>>>>........<<<<<.....>>>>>.......<<<<<.<<<<<<.....
Contig17.trna6 (103093-103007) Length: 87 bp
Type: Leu Anticodon: CAG at 35-37 (103059-103057) Score: 69.58
HMM Sc=43.74 Sec struct Sc=25.84
* | * | * | * | * | * | * | * | *
Seq: GCCCAGGTGGCGAAATTGGTaGACGCACTAGGTTCAGGTCCTAGCGGTGGCAACACTgTGGAGGTTCGAGTCCTCTCTTGGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>....<<<...>>>>>.......<<<<<<<<<<<<....
Contig17.trna7 (102854-102768) Length: 87 bp
Type: Leu Anticodon: CAG at 35-37 (102820-102818) Score: 76.78
HMM Sc=44.13 Sec struct Sc=32.65
* | * | * | * | * | * | * | * | *
Seq: GCCCAGGTGGCGGAATTGGTaGACGCACTAGGTTCAGGTCCTAGCGGTGGCAACACCGTGGAGGTTCGAGTCCTCTCCTGGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<....
Contig27.trna1 (144789-144879) Length: 91 bp
Type: Ser Anticodon: GGA at 35-37 (144823-144825) Score: 71.26
HMM Sc=47.56 Sec struct Sc=23.70
* | * | * | * | * | * | * | * | * |
Seq: GGAGAGATGGATGAGCGGTttAAGTCGCACGCCTGGAAAGCGTGTATAGGTTAATaGCCTATCGGGGGTTCGAATCCCCCTCTCTCCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>>.....<<<<<<.>>>>>.......<<<<<<<<<<<<....
Contig29.trna1 (37069-36985) Length: 85 bp
Type: Leu Anticodon: GAG at 35-37 (37035-37033) Score: 63.68
HMM Sc=32.34 Sec struct Sc=31.34
* | * | * | * | * | * | * | * |
Seq: GCCGACGTGGTGAAATTGGTaGACACGCTATCTTGAGGGGGTAGTGGCGAAAGCTGTGCGAGTTCGAGTCTCGCCGTCGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<....
Contig3.trna1 (16327-16251) Length: 77 bp
Type: Pro Anticodon: CGG at 35-37 (16293-16291) Score: 81.43
HMM Sc=57.93 Sec struct Sc=23.50
* | * | * | * | * | * | * | *
Seq: CGGGGTGTAGCTTAGCCtGGTAGAGCGCTACGTTCGGGACGTAGAGGcCGGAGGTTCGAATCCTCTCACCCCGACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
Contig30.trna1 (213129-213203) Length: 75 bp
Type: Arg Anticodon: CCT at 34-36 (213162-213164) Score: 67.55
HMM Sc=47.56 Sec struct Sc=19.99
* | * | * | * | * | * | * |
Seq: CTCCCTGTAGTTCAATGGAtAGAACAAGTGCCTCCTAAGCGCTAGATGCAGGTTCGATTCCTGCCAGGGGGACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
Contig30.trna2 (312420-312331) Length: 90 bp
Type: Ser Anticodon: CGA at 35-37 (312386-312384) Score: 70.39
HMM Sc=31.93 Sec struct Sc=38.46
* | * | * | * | * | * | * | * | *
Seq: GGAAAGGTGGCAGAGTGGTcgAATGCGCCGGACTCGAAATCCGGTGTACCTTTAGGGGTACCGTGAGTTCGAATCTCACCCTTTCCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>>....<<<<<<.>>>>>.......<<<<<<<<<<<<....
Contig31.trna1 (137529-137604) Length: 76 bp
Type: Lys Anticodon: TTT at 34-36 (137562-137564) Score: 89.16
HMM Sc=77.88 Sec struct Sc=11.28
* | * | * | * | * | * | * | *
Seq: GGGTCGTTAGCTCAGCTGGTAGAGCAGCGGACTTTTAATCCGTTGGtCACAGGTTCGAATCCCGTACGGCCTACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>.>>.......<<.<<<<<<<<<....
Contig31.trna2 (333525-333601) Length: 77 bp
Type: Gln Anticodon: TTG at 35-37 (333559-333561) Score: 76.28
HMM Sc=51.78 Sec struct Sc=24.50
* | * | * | * | * | * | * | *
Seq: AGGGGAGTCGCCAAGCTGGTtAAGGCACCGGATTTTGATTCCGGCATgCAAAGGTTCGAATCCTTTCTCCCCTGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
Contig32.trna1 (105213-105288) Length: 76 bp
Type: Lys Anticodon: CTT at 34-36 (105246-105248) Score: 94.68
HMM Sc=68.65 Sec struct Sc=26.03
* | * | * | * | * | * | * | *
Seq: GGGGCGTTAGCTCAGTTGGTAGAGCAGCGGACTCTTAATCCGTAGGtCGAGTGTTCGAGTCACTCACGCCCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
Contig32.trna2 (85151-85076) Length: 76 bp
Type: Phe Anticodon: GAA at 34-36 (85118-85116) Score: 86.97
HMM Sc=72.17 Sec struct Sc=14.80
* | * | * | * | * | * | * | *
Seq: GGCCCGGTAGCTCAGTTGGTAGAGCAGCGGATTGAAAATCCGCGTGtCGATGGTTCGATTCCGTCCCAGGCCACCA
Str: >>>>.>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<....
Contig32.trna3 (2318-2243) Length: 76 bp
Type: Ala Anticodon: CGC at 34-36 (2285-2283) Score: 80.39
HMM Sc=67.63 Sec struct Sc=12.76
* | * | * | * | * | * | * | *
Seq: GGGGGGGTAGCTCAGCTGGGAGAGCGTCGCGTTCGCAATGCGAAGGtCGGGAGTTCGATCCTCCTCCTCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
Contig37.trna1 (16163-16088) Length: 76 bp
Type: Lys Anticodon: TTT at 34-36 (16130-16128) Score: 93.40
HMM Sc=77.14 Sec struct Sc=16.26
* | * | * | * | * | * | * | *
Seq: GGGTCGTTAGCTCAGCTGGTAGAGCAGCGGACTTTTAATCCGTTGGtCGGCGGTTCGAATCCGCCACGGCCTACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
Contig38.trna1 (10132-10208) Length: 77 bp
Type: Val Anticodon: GAC at 35-37 (10166-10168) Score: 91.08
HMM Sc=63.95 Sec struct Sc=27.13
* | * | * | * | * | * | * | *
Seq: AGGCTCGTAGCTCAGTTGGTtAGAGCACCACCTTGACATGGTGGGGGtCGTTGGTTCGAATCCAATCGAGCCTACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
Contig4.trna1 (45099-45023) Length: 77 bp
Type: Met Anticodon: CAT at 35-37 (45065-45063) Score: 90.46
HMM Sc=71.71 Sec struct Sc=18.75
* | * | * | * | * | * | * | *
Seq: GGCGAATTAGCTCAGTTGGTtAGAGCGACGGAATCATAATCCGCAGGtCCGGGGTTCGAGTCCCTGATTCGCCACCA
Str: >>>>>>>..>>>>.........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<....
Contig5.trna1 (90109-90034) Length: 76 bp
Type: Thr Anticodon: CGT at 34-36 (90076-90074) Score: 86.97
HMM Sc=70.99 Sec struct Sc=15.98
* | * | * | * | * | * | * | *
Seq: GCCGGAATAGCTCAGACGGTAGAGCAGCGCATTCGTAATGCGAAGGtCGGGGGTTCGATTCCTCTTTCCGGCACCA
Str: >>>>>>>..>>>>........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<....
Contig5.trna2 (81316-81240) Length: 77 bp
Type: Arg Anticodon: ACG at 35-37 (81282-81280) Score: 88.62
HMM Sc=73.55 Sec struct Sc=15.07
* | * | * | * | * | * | * | *
Seq: GCGGCTGTAGCTCAGTTGGAtAGAGTACTTGGCTACGAACCAAGGGGtCGTGGGTTCGAATCCTGCCAGCCGCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
Contig5.trna3 (81171-81095) Length: 77 bp
Type: Arg Anticodon: ACG at 35-37 (81137-81135) Score: 88.62
HMM Sc=73.55 Sec struct Sc=15.07
* | * | * | * | * | * | * | *
Seq: GCGGCTGTAGCTCAGTTGGAtAGAGTACTTGGCTACGAACCAAGGGGtCGTGGGTTCGAATCCTGCCAGCCGCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
Contig5.trna4 (73128-73039) Length: 90 bp
Type: Ser Anticodon: TGA at 35-37 (73094-73092) Score: 75.81
HMM Sc=41.74 Sec struct Sc=34.07
* | * | * | * | * | * | * | * | *
Seq: GGAGGTGTGGCCGAGTGGTttAAGGCACCGGTCTTGAAAACCGGCGAAGGAGTGATCCTTCCGTGAGTTCGAATCTCACCGCCTCCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>>....<<<<<<.>>>>>.......<<<<<<<<<<<<....
Contig5.trna5 (53311-53238) Length: 74 bp
Type: Gly Anticodon: CCC at 33-35 (53279-53277) Score: 65.01
HMM Sc=39.19 Sec struct Sc=25.82
* | * | * | * | * | * | * |
Seq: GCGGGCGTCGTATAATGGTAATACCCTAGCTTCCCAAGCTAGAGcCGTGGGTTCGATTCCCATCGCCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
Contig5.trna6 (47797-47713) Length: 85 bp
Type: Leu Anticodon: CAA at 35-37 (47763-47761) Score: 75.09
HMM Sc=47.34 Sec struct Sc=27.75
* | * | * | * | * | * | * | * |
Seq: GCCCAGGTGGTGAAATTGGTaGACGCAGGGGACTCAAAATCCCCCGCCGCAAGGCGTGCCGGTTCGATTCCGGCCCTGGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<....
Contig55.trna1 (97078-97153) Length: 76 bp
Type: Arg Anticodon: CCG at 34-36 (97111-97113) Score: 83.93
HMM Sc=61.49 Sec struct Sc=22.44
* | * | * | * | * | * | * | *
Seq: GCGCCCGTAGCTCAATGGAtAGAGTACTGCCCTCCGAAGGCAGGGGtTGCTGGTTCGATCCCAGCCGGGCGCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
Contig6.trna1 (35841-35766) Length: 76 bp
Type: Asn Anticodon: GTT at 34-36 (35808-35806) Score: 84.40
HMM Sc=60.26 Sec struct Sc=24.14
* | * | * | * | * | * | * | *
Seq: TCCTCGATAGCTCAGTCGGTAGAGCGCCGGACTGTTAATCCGTAGGtCCCTGGTTCGAGCCCAGGTCGAGGAGCCA
Str: >>>>>>>..>>>>........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<....
Contig6.trna2 (35703-35628) Length: 76 bp
Type: Asn Anticodon: GTT at 34-36 (35670-35668) Score: 84.40
HMM Sc=60.26 Sec struct Sc=24.14
* | * | * | * | * | * | * | *
Seq: TCCTCGATAGCTCAGTCGGTAGAGCGCCGGACTGTTAATCCGTAGGtCCCTGGTTCGAGCCCAGGTCGAGGAGCCA
Str: >>>>>>>..>>>>........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<....
Contig7.trna1 (36339-36414) Length: 76 bp
Type: Gly Anticodon: GCC at 34-36 (36372-36374) Score: 93.38
HMM Sc=69.93 Sec struct Sc=23.45
* | * | * | * | * | * | * | *
Seq: GCGGGAGTAGCTCAGTTGGTAGAGCGCAACCTTGCCAAGGTTGAGGtCGCGAGTTCGAGCCTCGTCTCCCGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
Contig7.trna2 (36496-36571) Length: 76 bp
Type: Gly Anticodon: GCC at 34-36 (36529-36531) Score: 93.38
HMM Sc=69.93 Sec struct Sc=23.45
* | * | * | * | * | * | * | *
Seq: GCGGGAGTAGCTCAGTTGGTAGAGCGCAACCTTGCCAAGGTTGAGGtCGCGAGTTCGAGCCTCGTCTCCCGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
Contig7.trna3 (36671-36744) Length: 74 bp
Type: Cys Anticodon: GCA at 33-35 (36703-36705) Score: 64.58
HMM Sc=40.44 Sec struct Sc=24.14
* | * | * | * | * | * | * |
Seq: GGCGCGATAGCAAAGCGGTTATGCAGCGGCCTGCAAAGCCGTTTAGGCCGGTTCGACTCCGGCTCGCGCCTCCA
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
Contig7.trna4 (90763-90839) Length: 77 bp
Type: Arg Anticodon: TCT at 35-37 (90797-90799) Score: 87.25
HMM Sc=65.09 Sec struct Sc=22.16
* | * | * | * | * | * | * | *
Seq: GCGGCGGTAGCTCAATTGGAtAGAGCACAGGTCTTCTAAACCTGAGGtTGTGAGTTCGATCCTCGCCCGCCGCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
Contig7.trna5 (82760-82684) Length: 77 bp
Type: Pro Anticodon: TGG at 35-37 (82726-82724) Score: 89.00
HMM Sc=64.06 Sec struct Sc=24.94
* | * | * | * | * | * | * | *
Seq: CGGAGCGTAGCGCAGCCtGGTAGCGCATCTGATTTGGGATCAGAGGGtCGAAGGTTCGAATCCTTTCGCTCCGACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
Contig7.trna6 (52331-52257) Length: 75 bp
Type: Val Anticodon: CAC at 33-35 (52299-52297) Score: 85.83
HMM Sc=64.47 Sec struct Sc=21.36
* | * | * | * | * | * | * |
Seq: GGGTGGTTAGCTCAGCGGTAGAGCACTGCCTTCACACGGCAGGGGtCACTGGTTCGATCCCAGTACTACCCACCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
Contig8.trna1 (59360-59436) Length: 77 bp
Type: Val Anticodon: GAC at 35-37 (59394-59396) Score: 90.22
HMM Sc=63.10 Sec struct Sc=27.12
* | * | * | * | * | * | * | *
Seq: AGGCTCGTAGCTCAGCTGGTtAGAGCACCACCTTGACATGGTGGGGGtCGTTGGTTCGAGTCCAATCGAGCCTACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
Contig9.trna1 (5617-5693) Length: 77 bp
Type: Pro Anticodon: GGG at 35-37 (5651-5653) Score: 81.38
HMM Sc=60.95 Sec struct Sc=20.43
* | * | * | * | * | * | * | *
Seq: CGGGGCGTAGCGCAGCCtGGTAGCGTACCTGCATGGGGTGCAGGTGGtCGGAGGTTCAAATCCTCTCGCCCCGACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
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