Top 20 Categories

Top 20 InterPro

489	NULL	NULL
183	IPR000847	Bacterial regulatory protein, LysR
180	IPR005119	LysR, substrate-binding
157	IPR003593	AAA+ ATPase, core
135	IPR011701	Major facilitator superfamily MFS-1
133	IPR007114	Major facilitator superfamily
117	IPR003439	ABC transporter related
117	IPR002198	Short-chain dehydrogenase/reductase SDR
102	IPR002347	Glucose/ribitol dehydrogenase
80	IPR000515	Binding-protein-dependent transport systems inner membrane component
76	IPR013968	KR
75	IPR001789	Response regulator receiver
70	IPR000005	Helix-turn-helix, AraC type
58	IPR003594	ATP-binding region, ATPase-like
57	IPR001509	NAD-dependent epimerase/dehydratase
53	IPR005467	Histidine kinase
51	IPR005828	General substrate transporter
50	IPR004358	Histidine kinase related protein, C-terminal
46	IPR003661	Histidine kinase A, N-terminal
46	IPR000182	GCN5-related N-acetyltransferase

Top 20 HMMPfam

183	PF00126	HTH_1
180	PF03466	LysR_substrate
135	PF07690	MFS_1
111	PF00106	adh_short
105	PF00005	ABC_tran
80	PF00528	BPD_transp_1
76	PF08659	KR
69	PF00072	Response_reg
66	PF00165	HTH_AraC
58	PF02518	HATPase_c
57	PF01370	Epimerase
51	PF00083	Sugar_tr
46	PF00512	HisKA
45	PF01266	DAO
44	PF00583	Acetyltransf_1
41	PF00392	GntR
41	PF00155	Aminotran_1_2
40	PF00440	TetR_N
37	PF00561	Abhydrolase_1
37	PF00171	Aldedh

Top 20 HMMTigr

44	TIGR01409	TAT_signal_seq
22	TIGR01726	HEQRo_perm_3TM
20	TIGR00254	GGDEF
18	TIGR02937	sigma70-ECF
18	TIGR01845	outer_NodT
15	TIGR03361	VI_Rhs_Vgr
15	TIGR01730	RND_mfp
15	TIGR01646	vgr_GE
14	TIGR00229	sensory_box
11	TIGR02532	IV_pilin_GFxxxE
11	TIGR00711	efflux_EmrB
10	TIGR01930	AcCoA-C-Actrans
9	TIGR00231	small_GTP
8	TIGR01783	TonB-siderophor
7	TIGR03359	VI_chp_6
7	TIGR01891	amidohydrolases
7	TIGR01549	HAD-SF-IA-v1
7	TIGR01509	HAD-SF-IA-v3
7	TIGR00778	ahpD_dom
6	TIGR01728	SsuA_fam

Top 20 ProfileScan

197	PS00013	PROKAR_LIPOPROTEIN
181	PS50931	HTH_LYSR
133	PS50850	MFS
103	PS50893	ABC_TRANSPORTER_2
79	PS50928	ABC_TM1
74	PS50110	RESPONSE_REGULATORY
67	PS01124	HTH_ARAC_FAMILY_2
53	PS50109	HIS_KIN
44	PS51186	GNAT
41	PS50949	HTH_GNTR
40	PS50977	HTH_TETR_2
30	PS50043	HTH_LUXR_2
29	PS50885	HAMP
25	PS50956	HTH_ASNC_2
24	PS51007	CYTC
23	PS50943	HTH_CROC1
22	PS51085	2FE2S_FER_2
22	PS50995	HTH_MARR_2
21	PS50887	GGDEF
19	PS50045	SIGMA54_INTERACT_4

Top 20 FPrintScan

123	PR00039	HTHLYSR
102	PR00081	GDHRDH
88	PR00080	SDRFAMILY
65	PR00032	HTHARAC
50	PR00344	BCTRLSENSOR
41	PR01167	INSADHFAMILY
39	PR01590	HTHFIS
37	PR00368	FADPNR
36	PR00455	HTHTETR
34	PR00411	PNDRDTASEI
31	PR00184	NEISSPPORIN
30	PR00038	HTHLUXR
28	PR00035	HTHGNTR
25	PR00033	HTHASNC
24	PR00111	ABHYDROLASE
23	PR00182	ECOLNEIPORIN
23	PR00154	AMPBINDING
21	PR00469	PNDRDTASEII
16	PR00702	ACRIFLAVINRP
15	PR00420	RNGMNOXGNASE

Top 20 BlastProDom

105	PD000006	sp_Q7NZR6_CHRVO_Q7NZR6;
73	PD000039	sp_Q89JK2_BRAJA_Q89JK2;
33	PD000307	sp_Q8Z8P0_SALTI_Q8Z8P0;
28	PD000329	sp_Q8XYM2_RALSO_Q8XYM2;
19	PD000139	sp_Q9LLN1_ORYSA_Q9LLN1;
16	PD000930	sp_Q88DZ9_PSEPK_Q88DZ9;
12	PD000288	sp_Q9F5I2_AGRRH_Q9F5I2;
11	PD002334	sp_Q7U4Y1_SYNPX_Q7U4Y1;
10	PD000739	sp_Q9F667_PSEFL_Q9F667;
9	PD186071	sp_Q9I3B9_PSEAE_Q9I3B9;
9	PD007337	sp_Q6Y661_BURPS_Q6Y661;
8	PD001859	sp_Q89C45_BRAJA_Q89C45;
7	PD011584	sp_Q89LR1_BRAJA_Q89LR1;
7	PD001857	sp_Q92SG1_RHIME_Q92SG1;
6	PD008688	sp_Q9PGH6_XYLFA_Q9PGH6;
6	PD004020	sp_Q820S2_NITEU_Q820S2;
6	PD001895	sp_Q8XV55_RALSO_Q8XV55;
6	PD000621	sp_Q8XTV2_RALSO_Q8XTV2;
5	PD003679	sp_Q8GQA1_PSEAE_Q8GQA1;
5	PD001777	sp_Q7NUS2_CHRVO_Q7NUS2;

Top 20 COGs

236	COG1028	Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)
234	COG0451	Nucleoside-diphosphate-sugar epimerase
228	COG1120	ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components
226	COG4988	ABC-type transport system involved in cytochrome bd biosynthesis ATPase and permease components
226	COG1124	ABC-type dipeptide/oligopeptide/nickel transport system ATPase component
226	COG0444	ABC-type dipeptide/oligopeptide/nickel transport system ATPase component
222	COG4987	ABC-type transport system involved in cytochrome bd biosynthesis fused ATPase and permease components
218	COG4555	ABC-type Na+ transport system ATPase component
218	COG1134	ABC-type polysaccharide/polyol phosphate transport system ATPase component
204	COG4615	ABC-type siderophore export system fused ATPase and permease components
187	COG0583	Transcriptional regulator
186	COG2197	Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
150	COG0745	Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
136	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
132	COG3437	Response regulator containing a CheY-like receiver domain and an HD-GYP domain
132	COG2814	Arabinose efflux permease
127	COG4753	Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
124	COG4565	Response regulator of citrate/malate metabolism
124	COG3279	Response regulator of the LytR/AlgR family
120	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain

SiteMap Feedback Life Sciences Division ORNL Disclaimer Webmaster